ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet03f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
4gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 58 2e-05
5gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 56 9e-05
6dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
7dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
8dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 9e-05
9gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
11dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
12dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.005
13gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 48 0.021
14gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 48 0.021
15gb|CP000264.1| Jannaschia sp. CCS1, complete genome 46 0.082
16gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
17gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.32
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
19dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.32
20gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 5.1
21gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 5.1
22gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 5.1
23emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.1
24emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
25emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
26emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 40 5.1
27emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 5.1
28gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete seq... 40 5.1
29gb|AE012445.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.1
30ref|NM_166568.1| Drosophila melanogaster CG3499-RB (CG3499), mRNA 40 5.1
31gb|L49337.2|RHMMOTB Sinorhizobium meliloti FlgC (flgC) gene, par... 40 5.1
32gb|AY051480.1| Drosophila melanogaster GH14313 full length cDNA 40 5.1
33gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.1
34gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.1
35gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, r... 40 5.1
36gb|AC005650.1|AC005650 Drosophila melanogaster, chromosome 2R, r... 40 5.1
37gb|U76384.1|TAU76384 Triticum aestivum o-methyltransferase mRNA,... 40 5.1
38gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66... 40 5.1
39emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on ch... 40 5.1
40gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 5.1
41emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, ... 40 5.1 
>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                         
Query: 1     acgtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctc 60
             ||||||||||  ||| | |||||| |||||||||||||||||||  |||||||  |||||
Sbjct: 63288 acgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctc 63347

                                                      
Query: 61    ggcggcaccgcgtcgttgccggacctgatggccgcgctgtc 101
             |||||| ||||  |  | || ||||||||||||||||||||
Sbjct: 63348 ggcggcgccgccaccgtccctgacctgatggccgcgctgtc 63388



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 4      tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
              |||||||| ||| |||||||| || ||||||||||||| || |  ||||| |||||||||
Sbjct: 131452 tccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccgcctcggc 131393

                  
Query: 64     ggca 67
              ||||
Sbjct: 131392 ggca 131389



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                      
Query: 19     tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
              ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 119002 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 119057



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 194    gcctgaccccgctgtcctacatcctcgtggatggcgt 230
              |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 119189 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 119225
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1        acgtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctc 60
                ||||||||||  ||| | |||||| |||||||||||||||||||  |||||||  |||||
Sbjct: 11550500 acgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctc 11550441

                                                         
Query: 61       ggcggcaccgcgtcgttgccggacctgatggccgcgctgtc 101
                |||||| ||||  |  | || ||||||||||||||||||||
Sbjct: 11550440 ggcggcgccgccaccgtccctgacctgatggccgcgctgtc 11550400



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 19       tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
                ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11494786 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 11494731



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 4        tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
                |||||||| ||| |||||||| || ||||||||||||| || |  ||||| |||||||||
Sbjct: 11482336 tccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccgcctcggc 11482395

                    
Query: 64       ggca 67
                ||||
Sbjct: 11482396 ggca 11482399



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 107/134 (79%)
 Strand = Plus / Minus

                                                                            
Query: 18       gtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgtt 77
                ||||||| || ||||||||||||| || || ||||| |||  |||||||||||| ||| |
Sbjct: 11355235 gtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcaccgcctcgct 11355176

                                                                            
Query: 78       gccggacctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgt 137
                ||| |||||  | ||||| || || || |||||  |||||   ||||| ||| ||||| |
Sbjct: 11355175 gcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctccgccgcct 11355116

                              
Query: 138      cctgcggctgctgg 151
                | ||||||||||||
Sbjct: 11355115 catgcggctgctgg 11355102



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 59/68 (86%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                            
Query: 5        ccatggcactcaggtgcgccatcgagctcggcat-cccgacggcgatccagcgcctcggc 63
                ||||||| |||| ||||||| | ||||||||||| |||||| |||||||| |||| ||||
Sbjct: 19031097 ccatggcgctcaagtgcgccgtggagctcggcatccccgac-gcgatccaccgccgcggc 19031039

                        
Query: 64       ggcaccgc 71
                ||| ||||
Sbjct: 19031038 ggcgccgc 19031031



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                            
Query: 24       catcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgttgccgga 83
                |||| |||| |||||||| || || ||||| |||  ||||||| |||||||| |||| ||
Sbjct: 11439527 catcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccga 11439468

                                                                            
Query: 84       cctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgtcctgcg 143
                |||| |  |||| ||||| || |||||  |||||   ||||| ||| ||||| || ||||
Sbjct: 11439467 cctggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcg 11439408

                        
Query: 144      gctgctgg 151
                ||||||||
Sbjct: 11439407 gctgctgg 11439400



 Score = 46.1 bits (23), Expect = 0.082
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                            
Query: 4        tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
                |||||| | ||| |||||||| || | ||||||||||| || || ||||| |||| ||||
Sbjct: 11302993 tccatgactctccggtgcgccgtccacctcggcatccccaccgccatccaccgccacggc 11302934

                                       
Query: 64       ggcaccgcgtcgttgccggacct 86
                ||| |||| ||| |||| |||||
Sbjct: 11302933 ggcgccgcctcgctgcccgacct 11302911



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 29      agctcggcatcccgacggcgatccagcgcctcggcggc 66
               ||||||||||||| || || ||||| ||||||||||||
Sbjct: 7138922 agctcggcatccccaccgccatccaccgcctcggcggc 7138885



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 194      gcctgaccccgctgtcctacatcctcgtggatggcgt 230
                |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 11494599 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 11494563
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                            
Query: 1        acgtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctc 60
                ||||||||||  ||| | |||||| |||||||||||||||||||  |||||||  |||||
Sbjct: 11629689 acgtccatgggcctccgctgcgccgtcgagctcggcatcccgaccacgatccatggcctc 11629630

                                                         
Query: 61       ggcggcaccgcgtcgttgccggacctgatggccgcgctgtc 101
                |||||| ||||  |  | || ||||||||||||||||||||
Sbjct: 11629629 ggcggcgccgccaccgtccctgacctgatggccgcgctgtc 11629589



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                        
Query: 19       tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
                ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11573975 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 11573920



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                            
Query: 4        tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
                |||||||| ||| |||||||| || ||||||||||||| || |  ||||| |||||||||
Sbjct: 11561525 tccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccgcctcggc 11561584

                    
Query: 64       ggca 67
                ||||
Sbjct: 11561585 ggca 11561588



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 107/134 (79%)
 Strand = Plus / Minus

                                                                            
Query: 18       gtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgtt 77
                ||||||| || ||||||||||||| || || ||||| |||  |||||||||||| ||| |
Sbjct: 11434424 gtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcaccgcctcgct 11434365

                                                                            
Query: 78       gccggacctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgt 137
                ||| |||||  | ||||| || || || |||||  |||||   ||||| ||| ||||| |
Sbjct: 11434364 gcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctccgccgcct 11434305

                              
Query: 138      cctgcggctgctgg 151
                | ||||||||||||
Sbjct: 11434304 catgcggctgctgg 11434291



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 59/68 (86%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                            
Query: 5        ccatggcactcaggtgcgccatcgagctcggcat-cccgacggcgatccagcgcctcggc 63
                ||||||| |||| ||||||| | ||||||||||| |||||| |||||||| |||| ||||
Sbjct: 19189746 ccatggcgctcaagtgcgccgtggagctcggcatccccgac-gcgatccaccgccgcggc 19189688

                        
Query: 64       ggcaccgc 71
                ||| ||||
Sbjct: 19189687 ggcgccgc 19189680



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                            
Query: 24       catcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgttgccgga 83
                |||| |||| |||||||| || || ||||| |||  ||||||| |||||||| |||| ||
Sbjct: 11518716 catcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccga 11518657

                                                                            
Query: 84       cctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgtcctgcg 143
                |||| |  |||| ||||| || |||||  |||||   ||||| ||| ||||| || ||||
Sbjct: 11518656 cctggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcg 11518597

                        
Query: 144      gctgctgg 151
                ||||||||
Sbjct: 11518596 gctgctgg 11518589



 Score = 46.1 bits (23), Expect = 0.082
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                            
Query: 4        tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
                |||||| | ||| |||||||| || | ||||||||||| || || ||||| |||| ||||
Sbjct: 11382182 tccatgactctccggtgcgccgtccacctcggcatccccaccgccatccaccgccacggc 11382123

                                       
Query: 64       ggcaccgcgtcgttgccggacct 86
                ||| |||| ||| |||| |||||
Sbjct: 11382122 ggcgccgcctcgctgcccgacct 11382100



 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                     
Query: 29      agctcggcatcccgacggcgatccagcgcctcggcggc 66
               ||||||||||||| || || ||||| ||||||||||||
Sbjct: 7204893 agctcggcatccccaccgccatccaccgcctcggcggc 7204856



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 194      gcctgaccccgctgtcctacatcctcgtggatggcgt 230
                |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 11573788 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 11573752
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>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                
Query: 1   acgtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatcca 53
           ||||||||||  ||| | |||||| || |||||||||||||||||||||||||
Sbjct: 126 acgtccatggggctccgctgcgccgtcaagctcggcatcccgacggcgatcca 178
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 4     tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
             |||||||| ||| |||||||| || ||||||||||||| || |  ||||| |||||||||
Sbjct: 17201 tccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccgcctcggc 17142

                 
Query: 64    ggca 67
             ||||
Sbjct: 17141 ggca 17138



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 19   tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
            ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 4751 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 4806



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 102/128 (79%)
 Strand = Plus / Plus

                                                                         
Query: 24    catcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgttgccgga 83
             |||| |||| |||||||| || || ||||| |||  ||||||| |||||||| |||| ||
Sbjct: 60010 catcaagcttggcatccccaccgccatccaccgcgccggcggcgccgcgtcgctgcccga 60069

                                                                         
Query: 84    cctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgtcctgcg 143
             |||| |  |||| ||||| || |||||  |||||   ||||| ||| ||||| || ||||
Sbjct: 60070 cctggttaccgctctgtccctcccgccgtccaagctaccgttcctccgccgcctcatgcg 60129

                     
Query: 144   gctgctgg 151
             ||||||||
Sbjct: 60130 gctgctgg 60137



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 194  gcctgaccccgctgtcctacatcctcgtggatggcgt 230
            |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 4938 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 4974
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
           insert sequence
          Length = 1300

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                       
Query: 4   tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
           |||||||| ||| |||||||| || ||||||||||||| || |  ||||| |||||||||
Sbjct: 163 tccatggcgctccggtgcgccgtcaagctcggcatccccacagtcatccaccgcctcggc 222

               
Query: 64  ggca 67
           ||||
Sbjct: 223 ggca 226
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
           insert sequence
          Length = 1362

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 19  tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
           ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 162 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 217



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 194 gcctgaccccgctgtcctacatcctcgtggatggcgt 230
           |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 349 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 385
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
           insert sequence
          Length = 1264

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 19  tgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtc 74
           ||||||||| |||| |||||||| || || ||||| |||||||||||| |||||||
Sbjct: 167 tgcgccatcaagctgggcatccccaccgccatccaccgcctcggcggcgccgcgtc 222



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 194 gcctgaccccgctgtcctacatcctcgtggatggcgt 230
           |||| ||||||||||||  ||||||||| ||||||||
Sbjct: 354 gcctcaccccgctgtcccgcatcctcgtcgatggcgt 390
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 107/134 (79%)
 Strand = Plus / Minus

                                                                          
Query: 18     gtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggcggcaccgcgtcgtt 77
              ||||||| || ||||||||||||| || || ||||| |||  |||||||||||| ||| |
Sbjct: 141593 gtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcaccgcctcgct 141534

                                                                          
Query: 78     gccggacctgatggccgcgctgtcgcttccgccacccaaggcgccgtttctcagccgcgt 137
              ||| |||||  | ||||| || || || |||||  |||||   ||||| ||| ||||| |
Sbjct: 141533 gcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcctccgccgcct 141474

                            
Query: 138    cctgcggctgctgg 151
              | ||||||||||||
Sbjct: 141473 catgcggctgctgg 141460



 Score = 46.1 bits (23), Expect = 0.082
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                         
Query: 4     tccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcggc 63
             |||||| | ||| |||||||| || | ||||||||||| || || ||||| |||| ||||
Sbjct: 89351 tccatgactctccggtgcgccgtccacctcggcatccccaccgccatccaccgccacggc 89292

                                    
Query: 64    ggcaccgcgtcgttgccggacct 86
             ||| |||| ||| |||| |||||
Sbjct: 89291 ggcgccgcctcgctgcccgacct 89269
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                           
Query: 3       gtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcgg 62
               ||||||||| |||| |||||||  |||||||||||||||  | || ||||| |||| |||
Sbjct: 9845412 gtccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcgg 9845353

                        
Query: 63      cggcaccgc 71
               |||| ||||
Sbjct: 9845352 cggcgccgc 9845344
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>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0456E06
          Length = 164353

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 3      gtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcgg 62
              ||||||||| |||| |||||||  |||||||||||||||  | || ||||| |||| |||
Sbjct: 135654 gtccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcgg 135595

                       
Query: 63     cggcaccgc 71
              |||| ||||
Sbjct: 135594 cggcgccgc 135586
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>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0063H02
          Length = 152326

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                         
Query: 3     gtccatggcactcaggtgcgccatcgagctcggcatcccgacggcgatccagcgcctcgg 62
             ||||||||| |||| |||||||  |||||||||||||||  | || ||||| |||| |||
Sbjct: 42047 gtccatggcgctcaagtgcgccgccgagctcggcatccccgccgccatccaccgccgcgg 41988

                      
Query: 63    cggcaccgc 71
             |||| ||||
Sbjct: 41987 cggcgccgc 41979
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 59/68 (86%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                          
Query: 5      ccatggcactcaggtgcgccatcgagctcggcat-cccgacggcgatccagcgcctcggc 63
              ||||||| |||| ||||||| | ||||||||||| |||||| |||||||| |||| ||||
Sbjct: 134295 ccatggcgctcaagtgcgccgtggagctcggcatccccgac-gcgatccaccgccgcggc 134237

                      
Query: 64     ggcaccgc 71
              ||| ||||
Sbjct: 134236 ggcgccgc 134229
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 59/68 (86%), Gaps = 2/68 (2%)
 Strand = Plus / Minus

                                                                         
Query: 5     ccatggcactcaggtgcgccatcgagctcggcat-cccgacggcgatccagcgcctcggc 63
             ||||||| |||| ||||||| | ||||||||||| |||||| |||||||| |||| ||||
Sbjct: 33915 ccatggcgctcaagtgcgccgtggagctcggcatccccgac-gcgatccaccgccgcggc 33857

                     
Query: 64    ggcaccgc 71
             ||| ||||
Sbjct: 33856 ggcgccgc 33849
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 73     tcgttgccggacctgatggccgcgctg 99
              ||||||||||| |||||||||||||||
Sbjct: 597974 tcgttgccggagctgatggccgcgctg 598000
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 29    agctcggcatcccgacggcgatccagcgcctcggcggc 66
             ||||||||||||| || || ||||| ||||||||||||
Sbjct: 43633 agctcggcatccccaccgccatccaccgcctcggcggc 43670
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 29    agctcggcatcccgacggcgatccagcgcctcggcggc 66
             ||||||||||||| || || ||||| ||||||||||||
Sbjct: 52142 agctcggcatccccaccgccatccaccgcctcggcggc 52105
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 4        tccatggcactcaggtgcgccatcgagctcggcatccc 41
                ||||| ||||||||||||||| | ||||| ||||||||
Sbjct: 22272618 tccatagcactcaggtgcgccgtagagcttggcatccc 22272581
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>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0048G02
          Length = 155542

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 4     tccatggcactcaggtgcgccatcgagctcggcatccc 41
             ||||| ||||||||||||||| | ||||| ||||||||
Sbjct: 88994 tccatagcactcaggtgcgccgtagagcttggcatccc 88957
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 156    atccgacgccctggcgtgcgccgaggcc 183
              ||||||||||| ||| ||||||||||||
Sbjct: 790906 atccgacgcccgggcctgcgccgaggcc 790933
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 331     gataatgcgctgccagtgcc 350
               ||||||||||||||||||||
Sbjct: 3461444 gataatgcgctgccagtgcc 3461463
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    gcgtgcgccgaggccgggat 188
              ||||||||||||||||||||
Sbjct: 743619 gcgtgcgccgaggccgggat 743600
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 39      cccgacggcgatccagcgcc 58
               ||||||||||||||||||||
Sbjct: 3636862 cccgacggcgatccagcgcc 3636843
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cgtgcgccgaggccgggatc 189
              ||||||||||||||||||||
Sbjct: 210167 cgtgcgccgaggccgggatc 210148
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>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cgtgcgccgaggccgggatc 189
              ||||||||||||||||||||
Sbjct: 123971 cgtgcgccgaggccgggatc 123952
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cgtgcgccgaggccgggatc 189
              ||||||||||||||||||||
Sbjct: 200812 cgtgcgccgaggccgggatc 200793
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 27      cgagctcggcatcccgacgg 46
               ||||||||||||||||||||
Sbjct: 1401910 cgagctcggcatcccgacgg 1401891



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     cgagctcggcatcccgacgg 46
              ||||||||||||||||||||
Sbjct: 914655 cgagctcggcatcccgacgg 914636
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>gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete sequence
          Length = 143406

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 252    gcaggtggcctttccgctgg 271
              ||||||||||||||||||||
Sbjct: 114388 gcaggtggcctttccgctgg 114369
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>gb|AE012445.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 353
            of 460 of the complete genome
          Length = 11728

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   ccggacctgatggccgcgct 98
            ||||||||||||||||||||
Sbjct: 4738 ccggacctgatggccgcgct 4719
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>ref|NM_166568.1| Drosophila melanogaster CG3499-RB (CG3499), mRNA
          Length = 2785

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  cggctgctggccaaatccga 161
            ||||||||||||||||||||
Sbjct: 1024 cggctgctggccaaatccga 1043
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>gb|L49337.2|RHMMOTB Sinorhizobium meliloti FlgC (flgC) gene, partial cds; FliE (fliE),
            FlgG (flgG), FlgA (flgA), FlgI (flgI), FlgH (flgH), FliL
            (fliL), FliP (fliP), FlaA (flaA), FlaB (flaB), FlaC
            (flaC), FlaD (flaD), MotB (motB), MotC (motC), MotD
            (motD), and transcriptional regulator genes, complete
            cds; and unknown genes
          Length = 19824

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   cgagctcggcatcccgacgg 46
            ||||||||||||||||||||
Sbjct: 9507 cgagctcggcatcccgacgg 9526
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>gb|AY051480.1| Drosophila melanogaster GH14313 full length cDNA
          Length = 2493

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 cggctgctggccaaatccga 161
           ||||||||||||||||||||
Sbjct: 712 cggctgctggccaaatccga 731
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     ccgctggccgtgacctcgcg 284
               ||||||||||||||||||||
Sbjct: 3380699 ccgctggccgtgacctcgcg 3380718
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      ccggacctgatggccgcgct 98
               ||||||||||||||||||||
Sbjct: 1062938 ccggacctgatggccgcgct 1062957
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>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone
              BACR09K23, complete sequence
          Length = 191438

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    cggctgctggccaaatccga 161
              ||||||||||||||||||||
Sbjct: 128166 cggctgctggccaaatccga 128147
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>gb|AC005650.1|AC005650 Drosophila melanogaster, chromosome 2R, region 59B4-59B7, P1 clone
             DS02885, complete sequence
          Length = 60019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   cggctgctggccaaatccga 161
             ||||||||||||||||||||
Sbjct: 54960 cggctgctggccaaatccga 54979
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>gb|U76384.1|TAU76384 Triticum aestivum o-methyltransferase mRNA, complete cds
          Length = 1458

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 3   gtccatggcactcaggtgcgccatcgagctcggcat 38
           ||||||||| ||||  |||||||| |||||||||||
Sbjct: 144 gtccatggcgctcaaatgcgccatagagctcggcat 179
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>gb|AE003458.3| Drosophila melanogaster chromosome 2R, section 66 of 73 of the complete
              sequence
          Length = 302225

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    cggctgctggccaaatccga 161
              ||||||||||||||||||||
Sbjct: 291360 cggctgctggccaaatccga 291341
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>emb|AL772232.18| Mouse DNA sequence from clone RP23-119F15 on chromosome 4, complete
             sequence
          Length = 157168

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 252   gcaggtggcctttccgctgg 271
             ||||||||||||||||||||
Sbjct: 22651 gcaggtggcctttccgctgg 22670
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 85      ctgatggccgcgctgtcgct 104
               ||||||||||||||||||||
Sbjct: 2843511 ctgatggccgcgctgtcgct 2843530
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>emb|BX005355.10| Zebrafish DNA sequence from clone CH211-222M2, complete sequence
          Length = 227182

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 350    catctccattagagcatgtg 369
              ||||||||||||||||||||
Sbjct: 196493 catctccattagagcatgtg 196512


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,149,498
Number of Sequences: 3902068
Number of extensions: 2149498
Number of successful extensions: 40569
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39630
Number of HSP's gapped (non-prelim): 933
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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