>TNKS1_HUMAN (O95271) Tankyrase 1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1)|
           (TRF1-interacting ankyrin-related ADP-ribose polymerase)
          Length = 1327

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 304 HHQHHFQQSNRSCSGRRLPPHAPPP 230
           HH HH QQ  +   G   PP  PPP
Sbjct: 9   HHHHHHQQQLQPAPGASAPPPPPPP 33

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +1

Query: 1   LSSSCPTRPPIPPKCRSKNISLAPPPP 81
           L SS P+ PP PP   S + S+APPPP
Sbjct: 350 LPSSAPSGPPPPPPPLSVSGSVAPPPP 376

>RSMB_VIBVY (Q7MGK4) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 426

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 438 LADAGEVGDQPGFQFMWRKTRNGASSLRWPLVQEQDAECVQRCC 307
           LA   +V   PGF+  W   ++ A+ L +  +Q +D E +  CC
Sbjct: 208 LAAPCDVHSLPGFEQGWVSVQDAAAQLSFNYLQPKDGELILDCC 251

>RSMB_VIBVU (Q8DDE5) Ribosomal RNA small subunit methyltransferase B (EC|
           2.1.1.-) (rRNA (cytosine-C(5)-)-methyltransferase) (16S
           rRNA m5C967 methyltransferase)
          Length = 426

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -1

Query: 438 LADAGEVGDQPGFQFMWRKTRNGASSLRWPLVQEQDAECVQRCC 307
           LA   +V   PGF+  W   ++ A+ L +  +Q +D E +  CC
Sbjct: 208 LAAPCDVHSLPGFEQGWVSVQDAAAQLSFNYLQPKDGELILDCC 251

>YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III|
          Length = 938

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 1   LSSSCPTRP-PIPPKCRSKNISLAPPPP 81
           L+S  PTRP PIP  C+S + S++ P P
Sbjct: 895 LASMSPTRPQPIPISCKSSSNSISSPRP 922

>NIFA_AZOBR (P30667) Nif-specific regulatory protein|
          Length = 625

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 13  CPTRPPIPPKCRSKNISLAPPP 78
           CP+R P+PP+    + + APPP
Sbjct: 547 CPSRAPLPPQAPPPSPAAAPPP 568

>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 1   LSSSCPTRPPIPPKCRSKNISLAPPPP 81
           L SS P+ PP PP       +  PPPP
Sbjct: 347 LPSSAPSGPPPPPPLSMAGSTAPPPPP 373

>AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like protein)|
           (Neighbor of A-kinase anchoring protein 95) (Neighbor of
           AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase
           A-binding protein 95) (HAP95)
          Length = 646

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 16  PTRPPIPPKCRSKNISLAPPPP 81
           P +PP+PP+     +S  PPPP
Sbjct: 586 PAQPPVPPEPAPGAVSPPPPPP 607

>LCE4A_HUMAN (Q5TA78) Late cornified envelope protein 4A (Late envelope|
          protein 8) (Small proline-rich-like epidermal
          differentiation complex protein 4A)
          Length = 99

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +1

Query: 13 CPTRPPIPPKCRSKNISLAPPP 78
          CP  P  PPKC SK  S  PPP
Sbjct: 16 CPI-PKYPPKCPSKCASSCPPP 36


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.136    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,094,390
Number of Sequences: 219361
Number of extensions: 620174
Number of successful extensions: 3243
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3177
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)