ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet03d04 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 52.4 bits (124), Expect = 3e-07 Identities = 26/67 (38%), Positives = 42/67 (62%) Frame = +1 Query: 106 TDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKL 285 TD LL AQ +LW + ++ M+L+ A+ L + AIH GGAAS S++++ + L S++ Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRV 68 Query: 286 PFLARLL 306 L RL+ Sbjct: 69 SSLRRLM 75
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 52.0 bits (123), Expect = 4e-07 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%) Frame = +1 Query: 82 AAEKVFVPTDAE-LLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVA 258 A +KV + E LLQAQ +W H + MSL+CA+ LG+P +H+ G + S+L+ Sbjct: 2 ALQKVDISLSTEQLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQ 61 Query: 259 ALSLPASKLPFLARLL 306 ++ + K RL+ Sbjct: 62 SIPINKEKTQCFQRLM 77
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 50.1 bits (118), Expect = 1e-06 Identities = 22/64 (34%), Positives = 37/64 (57%) Frame = +1 Query: 115 ELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFL 294 +LLQAQ+ +W H + MSL+CA+ LG+P +H+ + S+L+ A+ + K Sbjct: 14 QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSF 73 Query: 295 ARLL 306 RL+ Sbjct: 74 QRLM 77
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 49.3 bits (116), Expect = 2e-06 Identities = 24/65 (36%), Positives = 41/65 (63%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV + +P IH G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLL 306 + RL+ Sbjct: 71 VRRLM 75
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 47.4 bits (111), Expect = 9e-06 Identities = 23/65 (35%), Positives = 41/65 (63%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLL 306 + RL+ Sbjct: 71 VRRLM 75
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 47.4 bits (111), Expect = 9e-06 Identities = 23/65 (35%), Positives = 41/65 (63%) Frame = +1 Query: 112 AELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPF 291 +E+ +AQ+ L++H ++ MSL+ AV++ +P I G S S LV+ L +P+SK+ Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGN 70 Query: 292 LARLL 306 + RL+ Sbjct: 71 VRRLM 75
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 37.7 bits (86), Expect = 0.007 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKL 285 ++AQ+ +W+H + + LR V LG+P IH G + S+LV L L ++ + Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPLKSTSI 66
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 31.6 bits (70), Expect = 0.53 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAAL 264 L +Q+ LW + + L+CAV L + IH G + + SEL + L Sbjct: 8 LSSQAKLWNFIYGFAESLVLKCAVQLDLANIIHNSGTSMTLSELSSRL 55
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = -1 Query: 308 RSRRARNGSLDAGRDRAATS---SDGDAAPPRRWMAVGTPRSTAQRS 177 R RRA G+L GR +++S SD D +P R A P + A+RS Sbjct: 331 RRRRAGEGALRRGRGFSSSSSSGSDSDLSPARSPSAPRAPAAAARRS 377
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 28.9 bits (63), Expect = 3.4 Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 13/82 (15%) Frame = -1 Query: 287 GSLDAGRDRAATSSDGDAAPPRRWMAVGTP-----RSTAQRSDMGVR*QRLWRHRSD--- 132 GSL A A T S A P+R + TP R R D R +R RH D Sbjct: 30 GSLPASPQSAITVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERHERDRDH 89 Query: 131 ----CAWSN-SASVGTNTFSAA 81 +S S +V TNT S++ Sbjct: 90 ERFAAVFSTASTTVPTNTSSSS 111
>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21| Length = 344 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 9/71 (12%) Frame = -1 Query: 293 RNGSLDAGRDRAATSSDGDA---------APPRRWMAVGTPRSTAQRSDMGVR*QRLWRH 141 R G D GR R D D APPR W TPR R G R + + + Sbjct: 188 RGGDRDRGRGRGFGRRDRDEGRLNSRERRAPPRDWDRPPTPRGRGGRGGRGGRDREVDSY 247 Query: 140 RSDCAWSNSAS 108 R S S Sbjct: 248 RGAAGRDRSRS 258
>ADA2A_BOVIN (Q28838) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)| (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2D adrenergic receptor) Length = 452 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -1 Query: 305 SRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTA----QRSDMGVR*QRLWRHR 138 SRR+ G G+ RA+ GD+ P R A G TA +RS G + R WR R Sbjct: 309 SRRSERGPRAKGKARASQVKPGDSLPRRGPGATGLGAPTAGPAEERSGGGAKASR-WRGR 367 Query: 137 SD 132 + Sbjct: 368 QN 369
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 28.5 bits (62), Expect = 4.5 Identities = 16/62 (25%), Positives = 31/62 (50%) Frame = +1 Query: 121 LQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPASKLPFLAR 300 ++AQ+ +W+ + + LRCAV+LG+ I + ++L + L + L R Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKLPVSDVNCDNLYR 71 Query: 301 LL 306 +L Sbjct: 72 IL 73
>PHY2_CERPU (Q39557) Phytochrome 2| Length = 1121 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -3 Query: 225 EAVDGRGDAEVDGAAERHGREVAEAVAPQVGLRLEQLRVGGDEHLLGRLTCHCR 64 +AV G+ +V G G ++ P G LE+ D LL +T HCR Sbjct: 108 QAVPSMGEMDVLGI----GTDIRTLFTPSSGAALEKAAATQDISLLNPITVHCR 157
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 99 RPHRRGVAPGAVRPVAPQP 155 RPH PGA+RP AP+P Sbjct: 443 RPHPFQNMPGAIRPAAPRP 461
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 99 RPHRRGVAPGAVRPVAPQP 155 RPH PGA+RP AP+P Sbjct: 443 RPHPFQNMPGAIRPAAPRP 461
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 99 RPHRRGVAPGAVRPVAPQP 155 RPH PGA+RP AP+P Sbjct: 443 RPHPFQNMPGAIRPAAPRP 461
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 99 RPHRRGVAPGAVRPVAPQP 155 RPH PGA+RP AP+P Sbjct: 443 RPHPFQNMPGAIRPAAPRP 461
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 27.7 bits (60), Expect = 7.7 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 99 RPHRRGVAPGAVRPVAPQP 155 RPH PGA+RP AP+P Sbjct: 441 RPHPFQNMPGAIRPTAPRP 459
>SYK_CERSY (O74059) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)| (LysRS) Length = 524 Score = 27.3 bits (59), Expect = 10.0 Identities = 12/30 (40%), Positives = 19/30 (63%) Frame = -1 Query: 281 LDAGRDRAATSSDGDAAPPRRWMAVGTPRS 192 LD G + + SS G+ P++W+ GTP+S Sbjct: 288 LDKGGKKISKSS-GNVVTPQKWLRYGTPQS 316
>HIS2_AZOSE (Q5P797) Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (PRA-PH)| Length = 108 Score = 27.3 bits (59), Expect = 10.0 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +1 Query: 70 MAGQAAEKVFVPTDAELLQAQ---SDLWRHSLCYLTPMSL 180 +A +AAE + D ++L +DLW HSL LT L Sbjct: 42 VAEEAAETIMAAKDKDMLHVVWEVTDLWFHSLVLLTHFGL 81
>NADE_DROME (Q9VYA0) Putative glutamine-dependent NAD(+) synthetase (EC| 6.3.5.1) (NAD(+) synthase [glutamine-hydrolyzing]) Length = 787 Score = 27.3 bits (59), Expect = 10.0 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 12/67 (17%) Frame = +1 Query: 88 EKVFVPTDAELLQAQSDLW------------RHSLCYLTPMSLRCAVDLGVPTAIHRLGG 231 + ++ P+ A+L + DL +HS L+ S ++D+G+ TA L G Sbjct: 696 QPIYTPSSAQLRPSSEDLLISTQRSSHLDDSKHS-SPLSSASASASIDVGISTAAVPLPG 754 Query: 232 AASPSEL 252 AA+P L Sbjct: 755 AAAPGGL 761 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 26,442,116 Number of Sequences: 219361 Number of extensions: 418706 Number of successful extensions: 1641 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1615 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1641 length of database: 80,573,946 effective HSP length: 78 effective length of database: 63,463,788 effective search space used: 1523130912 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
