ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet03a11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK120538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
2dbj|AK103854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
3dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for ... 523 e-145
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 484 e-133
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 484 e-133
6emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 484 e-133
7gb|BT018483.1| Zea mays clone EL01N0424D02.d mRNA sequence 434 e-118
8gb|AY106264.1| Zea mays PCO124599 mRNA sequence 281 1e-72
9ref|NM_124727.2| Arabidopsis thaliana protein transporter AT5G53... 72 2e-09
10dbj|AK117217.1| Arabidopsis thaliana At5g53480 mRNA for putative... 72 2e-09
11dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 72 2e-09
12gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC... 46 0.10
13emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Co... 46 0.10
14ref|NM_207683.2| Mus musculus phosphatidylinositol 3-kinase, C2 ... 42 1.6
15ref|NM_011084.1| Mus musculus phosphatidylinositol 3-kinase, C2 ... 42 1.6
16gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, co... 42 1.6
17gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, com... 42 1.6
18gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Canc... 42 1.6
19gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cance... 42 1.6
20gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 42 1.6
21emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chro... 42 1.6
22emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
23ref|XM_319040.2| Anopheles gambiae str. PEST ENSANGP00000013260 ... 42 1.6
24gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, compl... 42 1.6
25dbj|AB008791.1| Mus musculus mRNA for Phosphoinositide 3-Kinase-... 42 1.6
26gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 42 1.6
27dbj|AB008792.1| Mus musculus mRNA for Phosphoinositide 3-Kinase,... 42 1.6
28gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 6.4
29emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 ma... 40 6.4
30gb|AC125098.4| Mus musculus BAC clone RP24-195M13 from chromosom... 40 6.4
31emb|AL158201.19| Human DNA sequence from clone RP11-516A11 on ch... 40 6.4
32emb|AL160058.8| Human DNA sequence from clone RP11-280O1 on chro... 40 6.4
33emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N... 40 6.4
34gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.4
35gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus st... 40 6.4
36gb|AC073052.5| Homo sapiens BAC clone RP11-92F20 from 2, complet... 40 6.4
37gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complet... 40 6.4
38emb|X58741.1|HSHCKE69 H.sapiens HCK gene for tyrosine kinase (PT... 40 6.4
39gb|L47327.1|ANATAL Anabaena variabilis transaldolase (tal) gene,... 40 6.4
40emb|CT005243.3| Pan troglodytes chromosome X clone RP43-008I08 m... 40 6.4

>dbj|AK120538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129D16, full
            insert sequence
          Length = 3056

 Score =  523 bits (264), Expect = e-145
 Identities = 417/468 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
            |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 1471 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 1530

                                                                        
Query: 65   gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
            |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 1531 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 1590

                                                                        
Query: 125  ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
             | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1591 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 1650

                                                                        
Query: 185  attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
            ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 1651 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 1710

                                                                        
Query: 245  caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
            |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 1711 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 1770

                                                                        
Query: 305  accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
            ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 1771 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 1830

                                                                        
Query: 365  ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
             | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 1831 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 1890

                                                            
Query: 425  gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472
            |||||| | ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 1891 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 1938



to top

>dbj|AK103854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M08, full
            insert sequence
          Length = 2341

 Score =  523 bits (264), Expect = e-145
 Identities = 417/468 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
            |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 739  aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 798

                                                                        
Query: 65   gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
            |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 799  gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 858

                                                                        
Query: 125  ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
             | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 859  ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 918

                                                                        
Query: 185  attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
            ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 919  attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 978

                                                                        
Query: 245  caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
            |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 979  caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 1038

                                                                        
Query: 305  accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
            ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 1039 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 1098

                                                                        
Query: 365  ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
             | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 1099 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 1158

                                                            
Query: 425  gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472
            |||||| | ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 1159 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 1206



to top

>dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta2,
            partial cds
          Length = 3676

 Score =  523 bits (264), Expect = e-145
 Identities = 417/468 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5    aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
            |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 2073 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 2132

                                                                        
Query: 65   gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
            |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 2133 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 2192

                                                                        
Query: 125  ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
             | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 2193 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 2252

                                                                        
Query: 185  attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
            ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 2253 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 2312

                                                                        
Query: 245  caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
            |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 2313 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 2372

                                                                        
Query: 305  accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
            ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 2373 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 2432

                                                                        
Query: 365  ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
             | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 2433 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 2492

                                                            
Query: 425  gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472
            |||||| | ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 2493 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 2540



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  484 bits (244), Expect = e-133
 Identities = 394/444 (88%)
 Strand = Plus / Plus

                                                                            
Query: 5        aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
                |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 23439788 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 23439847

                                                                            
Query: 65       gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
                |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 23439848 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 23439907

                                                                            
Query: 125      ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
                 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 23439908 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 23439967

                                                                            
Query: 185      attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
                ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 23439968 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 23440027

                                                                            
Query: 245      caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
                |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 23440028 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 23440087

                                                                            
Query: 305      accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
                ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 23440088 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 23440147

                                                                            
Query: 365      ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
                 | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 23440148 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 23440207

                                        
Query: 425      gctcttcataatggcaaggatatg 448
                |||||| | ||||| |||||||||
Sbjct: 23440208 gctctttacaatgggaaggatatg 23440231



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 448      ggatgattctgtgatgaagactgcg 472
                ||||||| |||||||||||||||||
Sbjct: 23440336 ggatgatactgtgatgaagactgcg 23440360



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  484 bits (244), Expect = e-133
 Identities = 394/444 (88%)
 Strand = Plus / Plus

                                                                            
Query: 5        aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
                |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 23367979 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 23368038

                                                                            
Query: 65       gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
                |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 23368039 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 23368098

                                                                            
Query: 125      ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
                 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 23368099 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 23368158

                                                                            
Query: 185      attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
                ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 23368159 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 23368218

                                                                            
Query: 245      caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
                |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 23368219 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 23368278

                                                                            
Query: 305      accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
                ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 23368279 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 23368338

                                                                            
Query: 365      ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
                 | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 23368339 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 23368398

                                        
Query: 425      gctcttcataatggcaaggatatg 448
                |||||| | ||||| |||||||||
Sbjct: 23368399 gctctttacaatgggaaggatatg 23368422



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 448      ggatgattctgtgatgaagactgcg 472
                ||||||| |||||||||||||||||
Sbjct: 23368527 ggatgatactgtgatgaagactgcg 23368551



to top

>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 162261

 Score =  484 bits (244), Expect = e-133
 Identities = 394/444 (88%)
 Strand = Plus / Minus

                                                                         
Query: 5     aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
             |||||||| ||||||||||| ||||| ||||| |||||||||||||||||  ||||||||
Sbjct: 62371 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 62312

                                                                         
Query: 65    gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
             |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || 
Sbjct: 62311 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 62252

                                                                         
Query: 125   ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
              | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| |||
Sbjct: 62251 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 62192

                                                                         
Query: 185   attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
             ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 62191 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 62132

                                                                         
Query: 245   caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
             |||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||
Sbjct: 62131 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 62072

                                                                         
Query: 305   accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
             ||||| |||||||||||||| ||  |||| || |||||||| |||||||||||||| |||
Sbjct: 62071 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 62012

                                                                         
Query: 365   ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
              | ||||||||||  || |||||||||| |||||| ||  |||||||| | |||||||| 
Sbjct: 62011 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 61952

                                     
Query: 425   gctcttcataatggcaaggatatg 448
             |||||| | ||||| |||||||||
Sbjct: 61951 gctctttacaatgggaaggatatg 61928



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 448   ggatgattctgtgatgaagactgcg 472
             ||||||| |||||||||||||||||
Sbjct: 61823 ggatgatactgtgatgaagactgcg 61799



to top

>gb|BT018483.1| Zea mays clone EL01N0424D02.d mRNA sequence
          Length = 1744

 Score =  434 bits (219), Expect = e-118
 Identities = 405/467 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64
           |||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| 
Sbjct: 63  aactttgaggagtatcaggtgtgtgccattaccgtgggtgttgttggtgacctctgcaga 122

                                                                       
Query: 65  gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124
           |||||||| ||||||||||| |||| ||| || ||||||||||||||||||||||| || 
Sbjct: 123 gcactggaagacaaaattttacccttctgcgatggcatcatgacccagctcctgaaggac 182

                                                                       
Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184
           || ||||| || ||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 183 ctgtccagtaaccagttgcacagatctgtgaaaccaccgatattttcgtgctttggtgat 242

                                                                       
Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244
           || |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| 
Sbjct: 243 atagcactggcaattggggaggactttgagaagtatttgatctatgcgatgcctatgctc 302

                                                                       
Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304
           |||||||| || ||||||||||| ||| | || ||| |||||||||| ||||||||||||
Sbjct: 303 caaagtgctgctgatttgtcggcccataccactgcaactgatgatgagatgctcgactac 362

                                                                       
Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364
           ||||||||  |||| ||||| |||||||| ||||||||||| || || |||||||| |||
Sbjct: 363 accaatcagctaagaaatggaatcttggaagcctactctggtatcctgcaaggatttaag 422

                                                                       
Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424
            |||| |||||||  ||  | |||||||| |   | || |||||| ||||||||||||| 
Sbjct: 423 agttcacctaagacacaactgctgatgccattctctccgcatattattcagttccttgat 482

                                                          
Query: 425 gctcttcataatggcaaggatatggatgattctgtgatgaagactgc 471
           |||||  | ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 483 gctctgtacaatgggaaggatatggatgatactgtgatgaagactgc 529



to top

>gb|AY106264.1| Zea mays PCO124599 mRNA sequence
          Length = 1372

 Score =  281 bits (142), Expect = 1e-72
 Identities = 253/290 (87%)
 Strand = Plus / Plus

                                                                       
Query: 182 gatattgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatg 241
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 14  gatattgcactggcaattggggaaaactttgagaagtatttgatctatgcgatgcctatg 73

                                                                       
Query: 242 ctacaaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgac 301
           || |||||||| || |||||||| || ||| | || ||| |||||||||| |||||||||
Sbjct: 74  ctccaaagtgctgctgatttgtctgcccataccactgcaactgatgatgagatgctcgac 133

                                                                       
Query: 302 tacaccaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattc 361
           |||||||||||  |||||| ||| |||||||| ||||||||||| || || |||||||| 
Sbjct: 134 tacaccaatcagctaaggagtggaatcttggaagcctactctggtatcctgcaaggattt 193

                                                                       
Query: 362 aagggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttcctt 421
           ||| |||| |||||||  ||  |||||||| | ||||| ||||||||| |||||||||||
Sbjct: 194 aagagttcacctaagacacaactactgatgtcatatgctccacatattattcagttcctt 253

                                                             
Query: 422 gacgctcttcataatggcaaggatatggatgattctgtgatgaagactgc 471
           || |||||  | ||||| ||||||||||||||| ||||||||||||||||
Sbjct: 254 gatgctctgtacaatggaaaggatatggatgatgctgtgatgaagactgc 303



to top

>ref|NM_124727.2| Arabidopsis thaliana protein transporter AT5G53480 mRNA, complete cds
          Length = 3811

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 153/192 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60
            ||||||||||||||| || || || |||||| |||| || |||||||| || ||  | ||
Sbjct: 2093 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2152

                                                                        
Query: 61   cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120
            ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| |||||
Sbjct: 2153 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2212

                                                                        
Query: 121  agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180
            |||| | || ||||| || || ||| |||| || || ||||| |||||||| || |||||
Sbjct: 2213 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2272

                        
Query: 181  tgatattgcact 192
            ||| || |||||
Sbjct: 2273 tgacatagcact 2284



to top

>dbj|AK117217.1| Arabidopsis thaliana At5g53480 mRNA for putative importin beta,
            complete cds, clone: RAFL16-76-N11
          Length = 3810

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 153/192 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60
            ||||||||||||||| || || || |||||| |||| || |||||||| || ||  | ||
Sbjct: 2093 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2152

                                                                        
Query: 61   cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120
            ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| |||||
Sbjct: 2153 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2212

                                                                        
Query: 121  agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180
            |||| | || ||||| || || ||| |||| || || ||||| |||||||| || |||||
Sbjct: 2213 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2272

                        
Query: 181  tgatattgcact 192
            ||| || |||||
Sbjct: 2273 tgacatagcact 2284



to top

>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6
          Length = 82952

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 153/192 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1    tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60
            ||||||||||||||| || || || |||||| |||| || |||||||| || ||  | ||
Sbjct: 2216 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2275

                                                                        
Query: 61   cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120
            ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| |||||
Sbjct: 2276 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2335

                                                                        
Query: 121  agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180
            |||| | || ||||| || || ||| |||| || || ||||| |||||||| || |||||
Sbjct: 2336 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2395

                        
Query: 181  tgatattgcact 192
            ||| || |||||
Sbjct: 2396 tgacatagcact 2407



to top

>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence,
             complete sequence
          Length = 80381

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 143   cacagatctgtaaaaccacctatattctcgtgctttggtgatattgcactggcaattgg 201
             |||||||| || || || || |||||||| |||||||| || ||||| |||||||||||
Sbjct: 30421 cacagatcagtgaagcctccaatattctcatgctttggagacattgctctggcaattgg 30363



to top

>emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH64ZE06 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2944

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                       
Query: 143  cacagatctgtaaaaccacctatattctcgtgctttggtgatattgcactggcaattgg 201
            |||||||| || || || || |||||||| |||||||| || ||||| |||||||||||
Sbjct: 2279 cacagatcagtgaagcctccaatattctcatgctttggagacattgctctggcaattgg 2337



to top

>ref|NM_207683.2| Mus musculus phosphatidylinositol 3-kinase, C2 domain containing,
            gamma polypeptide (Pik3c2g), transcript variant 1, mRNA
          Length = 6358

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 370  ccctaagatgcagttactgatgccgtatg 398
            ||||||| |||||||||||||| ||||||
Sbjct: 4603 ccctaaggtgcagttactgatgacgtatg 4631



to top

>ref|NM_011084.1| Mus musculus phosphatidylinositol 3-kinase, C2 domain containing,
            gamma polypeptide (Pik3c2g), transcript variant 2, mRNA
          Length = 3607

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 370  ccctaagatgcagttactgatgccgtatg 398
            ||||||| |||||||||||||| ||||||
Sbjct: 1852 ccctaaggtgcagttactgatgacgtatg 1880



to top

>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence
          Length = 131587

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 67    actggaggacaaaattttgccctactgtg 95
             ||||||||||| ||||||||| |||||||
Sbjct: 84470 actggaggacataattttgccttactgtg 84498



to top

>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence
          Length = 157629

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 430    tcataatggcaaggatatgga 450
              |||||||||||||||||||||
Sbjct: 146764 tcataatggcaaggatatgga 146744



to top

>gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 172372

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 370    ccctaagatgcagttactgatgccgtatg 398
              ||||||| |||||||||||||| ||||||
Sbjct: 139037 ccctaaggtgcagttactgatgacgtatg 139065



to top

>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 246705

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 370  ccctaagatgcagttactgatgccgtatg 398
            ||||||| |||||||||||||| ||||||
Sbjct: 3714 ccctaaggtgcagttactgatgacgtatg 3742



to top

>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 315    taaggaatggcatcttggagg 335
              |||||||||||||||||||||
Sbjct: 237900 taaggaatggcatcttggagg 237920



to top

>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part
             of the ESRRG gene for  estrogen-related receptor gamma,
             complete sequence
          Length = 48868

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   taaggaatggcatcttggagg 335
             |||||||||||||||||||||
Sbjct: 35450 taaggaatggcatcttggagg 35430



to top

>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 272    gcaaccgcagctgatgatgaa 292
              |||||||||||||||||||||
Sbjct: 331657 gcaaccgcagctgatgatgaa 331637



to top

>ref|XM_319040.2| Anopheles gambiae str. PEST ENSANGP00000013260 (ENSANGG00000010771),
            partial mRNA
          Length = 2646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 84   tgccctactgtgacggcatcatgac 108
            ||||||||||||||| |||||||||
Sbjct: 2069 tgccctactgtgacgacatcatgac 2093



to top

>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence
          Length = 195874

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 430   tcataatggcaaggatatgga 450
             |||||||||||||||||||||
Sbjct: 83571 tcataatggcaaggatatgga 83591



to top

>dbj|AB008791.1| Mus musculus mRNA for Phosphoinositide 3-Kinase-C2gamma, complete cds
          Length = 6358

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 370  ccctaagatgcagttactgatgccgtatg 398
            ||||||| |||||||||||||| ||||||
Sbjct: 4603 ccctaaggtgcagttactgatgacgtatg 4631



to top

>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 430    tcataatggcaaggatatgga 450
              |||||||||||||||||||||
Sbjct: 202589 tcataatggcaaggatatgga 202569



to top

>dbj|AB008792.1| Mus musculus mRNA for Phosphoinositide 3-Kinase, complete cds
          Length = 3607

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 370  ccctaagatgcagttactgatgccgtatg 398
            ||||||| |||||||||||||| ||||||
Sbjct: 1852 ccctaaggtgcagttactgatgacgtatg 1880



to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    attctcgtgctttggtgata 185
              ||||||||||||||||||||
Sbjct: 614527 attctcgtgctttggtgata 614546



to top

>emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 map Xq28, complete
             sequence
          Length = 197120

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     aaaactttgaagagtatcag 22
             ||||||||||||||||||||
Sbjct: 31818 aaaactttgaagagtatcag 31837



to top

>gb|AC125098.4| Mus musculus BAC clone RP24-195M13 from chromosome 16, complete
             sequence
          Length = 182685

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    attacagtgggtgttgtggg 51
             ||||||||||||||||||||
Sbjct: 89883 attacagtgggtgttgtggg 89902



to top

>emb|AL158201.19| Human DNA sequence from clone RP11-516A11 on chromosome Xq12-13.1
              Contains part of the OPHN1 gene for oligophrenin 1, a
              phosphoglycerate kinase 1 (PGK1) pseudogene and a novel
              pseudogene, complete sequence
          Length = 141955

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      aaaactttgaagagtatcag 22
              ||||||||||||||||||||
Sbjct: 116668 aaaactttgaagagtatcag 116649



to top

>emb|AL160058.8| Human DNA sequence from clone RP11-280O1 on chromosome 1 Contains the
             5' end of the LMX1A gene for alpha LIM homeobox
             transcription factor 1, the RXRG gene for gamma retinoid X
             receptor, the 3' end of a novel gene (FLJ35813) and two
             CpG islands, complete sequence
          Length = 155369

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gtatcaggtatgtgctatta 35
             ||||||||||||||||||||
Sbjct: 31023 gtatcaggtatgtgctatta 31042



to top

>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21
            Contains the 3' end of the HCK for hemopoietic cell
            kinase, the gene for novel protein (KIAA0255), the
            RPL24P1 gene for ribosomal protein L24 pseudogene 1 and
            two CpG Islands, complete sequence
          Length = 111694

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  gaatggcatcttggaggcct 338
            ||||||||||||||||||||
Sbjct: 8426 gaatggcatcttggaggcct 8407



to top

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 39      tgggtgttgtgggtgacctg 58
               ||||||||||||||||||||
Sbjct: 1836997 tgggtgttgtgggtgacctg 1836978



to top

>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome
          Length = 139342

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 3     aaaactttgaagagtatcaggtat 26
             ||||||||||||||||||| ||||
Sbjct: 59152 aaaactttgaagagtatcatgtat 59129



to top

>gb|AC073052.5| Homo sapiens BAC clone RP11-92F20 from 2, complete sequence
          Length = 127070

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   aaggatatggatgattctgt 459
             ||||||||||||||||||||
Sbjct: 64571 aaggatatggatgattctgt 64552



to top

>gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complete sequence
          Length = 179937

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   ggatgattctgtgatgaaga 467
             ||||||||||||||||||||
Sbjct: 80027 ggatgattctgtgatgaaga 80046



to top

>emb|X58741.1|HSHCKE69 H.sapiens HCK gene for tyrosine kinase (PTK), exons 6-9
          Length = 5268

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 319 gaatggcatcttggaggcct 338
           ||||||||||||||||||||
Sbjct: 808 gaatggcatcttggaggcct 789



to top

>gb|L47327.1|ANATAL Anabaena variabilis transaldolase (tal) gene, complete cds
          Length = 1260

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 attctcgtgctttggtgata 185
           ||||||||||||||||||||
Sbjct: 495 attctcgtgctttggtgata 476



to top

>emb|CT005243.3| Pan troglodytes chromosome X clone RP43-008I08 map Xq28, complete
              sequence
          Length = 180222

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 3      aaaactttgaagagtatcag 22
              ||||||||||||||||||||
Sbjct: 172102 aaaactttgaagagtatcag 172121


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,810,511
Number of Sequences: 3902068
Number of extensions: 3810511
Number of successful extensions: 79239
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79124
Number of HSP's gapped (non-prelim): 115
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top