| Clone Name | baet03a11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK120538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129D16, full insert sequence Length = 3056 Score = 523 bits (264), Expect = e-145 Identities = 417/468 (89%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1471 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 1530 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 1531 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 1590 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 1591 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 1650 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1651 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 1710 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 1711 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 1770 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 1771 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 1830 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 1831 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 1890 Query: 425 gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472 |||||| | ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1891 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 1938
>dbj|AK103854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M08, full insert sequence Length = 2341 Score = 523 bits (264), Expect = e-145 Identities = 417/468 (89%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 739 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 798 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 799 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 858 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 859 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 918 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 919 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 978 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 979 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 1038 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 1039 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 1098 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 1099 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 1158 Query: 425 gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472 |||||| | ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1159 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 1206
>dbj|AB011271.1| Oryza sativa (japonica cultivar-group) mRNA for importin-beta2, partial cds Length = 3676 Score = 523 bits (264), Expect = e-145 Identities = 417/468 (89%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 2073 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 2132 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 2133 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 2192 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 2193 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 2252 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2253 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 2312 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 2313 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 2372 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 2373 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 2432 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 2433 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 2492 Query: 425 gctcttcataatggcaaggatatggatgattctgtgatgaagactgcg 472 |||||| | ||||| ||||||||||||||| ||||||||||||||||| Sbjct: 2493 gctctttacaatgggaaggatatggatgatactgtgatgaagactgcg 2540
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 484 bits (244), Expect = e-133 Identities = 394/444 (88%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 23439788 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 23439847 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 23439848 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 23439907 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 23439908 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 23439967 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 23439968 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 23440027 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 23440028 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 23440087 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 23440088 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 23440147 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 23440148 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 23440207 Query: 425 gctcttcataatggcaaggatatg 448 |||||| | ||||| ||||||||| Sbjct: 23440208 gctctttacaatgggaaggatatg 23440231 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 448 ggatgattctgtgatgaagactgcg 472 ||||||| ||||||||||||||||| Sbjct: 23440336 ggatgatactgtgatgaagactgcg 23440360
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 484 bits (244), Expect = e-133 Identities = 394/444 (88%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 23367979 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 23368038 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 23368039 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 23368098 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 23368099 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 23368158 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 23368159 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 23368218 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 23368219 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 23368278 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 23368279 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 23368338 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 23368339 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 23368398 Query: 425 gctcttcataatggcaaggatatg 448 |||||| | ||||| ||||||||| Sbjct: 23368399 gctctttacaatgggaaggatatg 23368422 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 448 ggatgattctgtgatgaagactgcg 472 ||||||| ||||||||||||||||| Sbjct: 23368527 ggatgatactgtgatgaagactgcg 23368551
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 484 bits (244), Expect = e-133 Identities = 394/444 (88%) Strand = Plus / Minus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 62371 aactttgaggagtatcaggtctgtgccattaccgtgggtgttgtgggtgatttgtgcagg 62312 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||||||||||||| |||| |||||||| || ||||||||||| |||||||| || Sbjct: 62311 gcactggaggacaaaattctgccttactgtgatggaatcatgacccaactcctgaaggac 62252 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 | || ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||| Sbjct: 62251 ttgtcgagcaatcagttgcatagatctgtaaagccacctatattctcatgctttggcgat 62192 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 62191 attgcactggcaattggggagaactttgagaagtatttgatatatgccatgcccatgcta 62132 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||| Sbjct: 62131 caaagtgcagcagatttgtcggcgcatgctgctgcagctgatgatgaaatgctcgattac 62072 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 ||||| |||||||||||||| || |||| || |||||||| |||||||||||||| ||| Sbjct: 62071 accaaccaattaaggaatggaatactggaagcatactctggtattcttcaaggatttaag 62012 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 | |||||||||| || |||||||||| |||||| || |||||||| | |||||||| Sbjct: 62011 agctcccctaagacacaattactgatgcagtatgctcccaatattcttaatttccttgat 61952 Query: 425 gctcttcataatggcaaggatatg 448 |||||| | ||||| ||||||||| Sbjct: 61951 gctctttacaatgggaaggatatg 61928 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 448 ggatgattctgtgatgaagactgcg 472 ||||||| ||||||||||||||||| Sbjct: 61823 ggatgatactgtgatgaagactgcg 61799
>gb|BT018483.1| Zea mays clone EL01N0424D02.d mRNA sequence Length = 1744 Score = 434 bits (219), Expect = e-118 Identities = 405/467 (86%) Strand = Plus / Plus Query: 5 aactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtgcagg 64 |||||||| ||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 63 aactttgaggagtatcaggtgtgtgccattaccgtgggtgttgttggtgacctctgcaga 122 Query: 65 gcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaaagat 124 |||||||| ||||||||||| |||| ||| || ||||||||||||||||||||||| || Sbjct: 123 gcactggaagacaaaattttacccttctgcgatggcatcatgacccagctcctgaaggac 182 Query: 125 ctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttggtgat 184 || ||||| || ||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 183 ctgtccagtaaccagttgcacagatctgtgaaaccaccgatattttcgtgctttggtgat 242 Query: 185 attgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatgcta 244 || |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 243 atagcactggcaattggggaggactttgagaagtatttgatctatgcgatgcctatgctc 302 Query: 245 caaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgactac 304 |||||||| || ||||||||||| ||| | || ||| |||||||||| |||||||||||| Sbjct: 303 caaagtgctgctgatttgtcggcccataccactgcaactgatgatgagatgctcgactac 362 Query: 305 accaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattcaag 364 |||||||| |||| ||||| |||||||| ||||||||||| || || |||||||| ||| Sbjct: 363 accaatcagctaagaaatggaatcttggaagcctactctggtatcctgcaaggatttaag 422 Query: 365 ggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttccttgac 424 |||| ||||||| || | |||||||| | | || |||||| ||||||||||||| Sbjct: 423 agttcacctaagacacaactgctgatgccattctctccgcatattattcagttccttgat 482 Query: 425 gctcttcataatggcaaggatatggatgattctgtgatgaagactgc 471 ||||| | ||||| ||||||||||||||| |||||||||||||||| Sbjct: 483 gctctgtacaatgggaaggatatggatgatactgtgatgaagactgc 529
>gb|AY106264.1| Zea mays PCO124599 mRNA sequence Length = 1372 Score = 281 bits (142), Expect = 1e-72 Identities = 253/290 (87%) Strand = Plus / Plus Query: 182 gatattgcactggcaattggggagaactttgagaagtatttgatctatgcgatgcccatg 241 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 14 gatattgcactggcaattggggaaaactttgagaagtatttgatctatgcgatgcctatg 73 Query: 242 ctacaaagtgcagcagatttgtcggcgcatgcaaccgcagctgatgatgaaatgctcgac 301 || |||||||| || |||||||| || ||| | || ||| |||||||||| ||||||||| Sbjct: 74 ctccaaagtgctgctgatttgtctgcccataccactgcaactgatgatgagatgctcgac 133 Query: 302 tacaccaatcaattaaggaatggcatcttggaggcctactctggcattcttcaaggattc 361 ||||||||||| |||||| ||| |||||||| ||||||||||| || || |||||||| Sbjct: 134 tacaccaatcagctaaggagtggaatcttggaagcctactctggtatcctgcaaggattt 193 Query: 362 aagggttcccctaagatgcagttactgatgccgtatgccccacatattcttcagttcctt 421 ||| |||| ||||||| || |||||||| | ||||| ||||||||| ||||||||||| Sbjct: 194 aagagttcacctaagacacaactactgatgtcatatgctccacatattattcagttcctt 253 Query: 422 gacgctcttcataatggcaaggatatggatgattctgtgatgaagactgc 471 || ||||| | ||||| ||||||||||||||| |||||||||||||||| Sbjct: 254 gatgctctgtacaatggaaaggatatggatgatgctgtgatgaagactgc 303
>ref|NM_124727.2| Arabidopsis thaliana protein transporter AT5G53480 mRNA, complete cds Length = 3811 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 1 tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60 ||||||||||||||| || || || |||||| |||| || |||||||| || || | || Sbjct: 2093 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2152 Query: 61 cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120 ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| ||||| Sbjct: 2153 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2212 Query: 121 agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180 |||| | || ||||| || || ||| |||| || || ||||| |||||||| || ||||| Sbjct: 2213 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2272 Query: 181 tgatattgcact 192 ||| || ||||| Sbjct: 2273 tgacatagcact 2284
>dbj|AK117217.1| Arabidopsis thaliana At5g53480 mRNA for putative importin beta, complete cds, clone: RAFL16-76-N11 Length = 3810 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 1 tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60 ||||||||||||||| || || || |||||| |||| || |||||||| || || | || Sbjct: 2093 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2152 Query: 61 cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120 ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| ||||| Sbjct: 2153 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2212 Query: 121 agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180 |||| | || ||||| || || ||| |||| || || ||||| |||||||| || ||||| Sbjct: 2213 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2272 Query: 181 tgatattgcact 192 ||| || ||||| Sbjct: 2273 tgacatagcact 2284
>dbj|AB015476.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNC6 Length = 82952 Score = 71.9 bits (36), Expect = 2e-09 Identities = 153/192 (79%) Strand = Plus / Plus Query: 1 tcaaaactttgaagagtatcaggtatgtgctattacagtgggtgttgtgggtgacctgtg 60 ||||||||||||||| || || || |||||| |||| || |||||||| || || | || Sbjct: 2216 tcaaaactttgaagaataccaagtgtgtgctgttactgttggtgttgttggggatgtctg 2275 Query: 61 cagggcactggaggacaaaattttgccctactgtgacggcatcatgacccagctcctgaa 120 ||| ||| |||||||||| ||||| || || || || || || ||||| ||||| ||||| Sbjct: 2276 cagagcattggaggacaagattttaccttattgcgatgggattatgacacagcttctgaa 2335 Query: 121 agatctatccagcaatcagttacacagatctgtaaaaccacctatattctcgtgctttgg 180 |||| | || ||||| || || ||| |||| || || ||||| |||||||| || ||||| Sbjct: 2336 agatttgtcgagcaaccaattgcaccgatcagtgaagccaccgatattctcctgttttgg 2395 Query: 181 tgatattgcact 192 ||| || ||||| Sbjct: 2396 tgacatagcact 2407
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 143 cacagatctgtaaaaccacctatattctcgtgctttggtgatattgcactggcaattgg 201 |||||||| || || || || |||||||| |||||||| || ||||| ||||||||||| Sbjct: 30421 cacagatcagtgaagcctccaatattctcatgctttggagacattgctctggcaattgg 30363
>emb|BX824687.1|CNS0A7D7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH64ZE06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2944 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Plus Query: 143 cacagatctgtaaaaccacctatattctcgtgctttggtgatattgcactggcaattgg 201 |||||||| || || || || |||||||| |||||||| || ||||| ||||||||||| Sbjct: 2279 cacagatcagtgaagcctccaatattctcatgctttggagacattgctctggcaattgg 2337
>ref|NM_207683.2| Mus musculus phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide (Pik3c2g), transcript variant 1, mRNA Length = 6358 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 4603 ccctaaggtgcagttactgatgacgtatg 4631
>ref|NM_011084.1| Mus musculus phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide (Pik3c2g), transcript variant 2, mRNA Length = 3607 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 1852 ccctaaggtgcagttactgatgacgtatg 1880
>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence Length = 131587 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 67 actggaggacaaaattttgccctactgtg 95 ||||||||||| ||||||||| ||||||| Sbjct: 84470 actggaggacataattttgccttactgtg 84498
>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence Length = 157629 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tcataatggcaaggatatgga 450 ||||||||||||||||||||| Sbjct: 146764 tcataatggcaaggatatgga 146744
>gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 172372 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 139037 ccctaaggtgcagttactgatgacgtatg 139065
>gb|AC158625.9| Mus musculus 6 BAC RP23-78J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 246705 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 3714 ccctaaggtgcagttactgatgacgtatg 3742
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 315 taaggaatggcatcttggagg 335 ||||||||||||||||||||| Sbjct: 237900 taaggaatggcatcttggagg 237920
>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 48868 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 315 taaggaatggcatcttggagg 335 ||||||||||||||||||||| Sbjct: 35450 taaggaatggcatcttggagg 35430
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 gcaaccgcagctgatgatgaa 292 ||||||||||||||||||||| Sbjct: 331657 gcaaccgcagctgatgatgaa 331637
>ref|XM_319040.2| Anopheles gambiae str. PEST ENSANGP00000013260 (ENSANGG00000010771), partial mRNA Length = 2646 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 84 tgccctactgtgacggcatcatgac 108 ||||||||||||||| ||||||||| Sbjct: 2069 tgccctactgtgacgacatcatgac 2093
>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence Length = 195874 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 430 tcataatggcaaggatatgga 450 ||||||||||||||||||||| Sbjct: 83571 tcataatggcaaggatatgga 83591
>dbj|AB008791.1| Mus musculus mRNA for Phosphoinositide 3-Kinase-C2gamma, complete cds Length = 6358 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 4603 ccctaaggtgcagttactgatgacgtatg 4631
>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence Length = 226189 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 tcataatggcaaggatatgga 450 ||||||||||||||||||||| Sbjct: 202589 tcataatggcaaggatatgga 202569
>dbj|AB008792.1| Mus musculus mRNA for Phosphoinositide 3-Kinase, complete cds Length = 3607 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 ccctaagatgcagttactgatgccgtatg 398 ||||||| |||||||||||||| |||||| Sbjct: 1852 ccctaaggtgcagttactgatgacgtatg 1880
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 attctcgtgctttggtgata 185 |||||||||||||||||||| Sbjct: 614527 attctcgtgctttggtgata 614546
>emb|CT005234.2| Pan troglodytes chromosome X clone PTB-147L24 map Xq28, complete sequence Length = 197120 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaaactttgaagagtatcag 22 |||||||||||||||||||| Sbjct: 31818 aaaactttgaagagtatcag 31837
>gb|AC125098.4| Mus musculus BAC clone RP24-195M13 from chromosome 16, complete sequence Length = 182685 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 attacagtgggtgttgtggg 51 |||||||||||||||||||| Sbjct: 89883 attacagtgggtgttgtggg 89902
>emb|AL158201.19| Human DNA sequence from clone RP11-516A11 on chromosome Xq12-13.1 Contains part of the OPHN1 gene for oligophrenin 1, a phosphoglycerate kinase 1 (PGK1) pseudogene and a novel pseudogene, complete sequence Length = 141955 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 aaaactttgaagagtatcag 22 |||||||||||||||||||| Sbjct: 116668 aaaactttgaagagtatcag 116649
>emb|AL160058.8| Human DNA sequence from clone RP11-280O1 on chromosome 1 Contains the 5' end of the LMX1A gene for alpha LIM homeobox transcription factor 1, the RXRG gene for gamma retinoid X receptor, the 3' end of a novel gene (FLJ35813) and two CpG islands, complete sequence Length = 155369 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gtatcaggtatgtgctatta 35 |||||||||||||||||||| Sbjct: 31023 gtatcaggtatgtgctatta 31042
>emb|AL049539.21|HSJ836N17 Human DNA sequence from clone RP5-836N17 on chromosome 20q11.1-11.21 Contains the 3' end of the HCK for hemopoietic cell kinase, the gene for novel protein (KIAA0255), the RPL24P1 gene for ribosomal protein L24 pseudogene 1 and two CpG Islands, complete sequence Length = 111694 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 gaatggcatcttggaggcct 338 |||||||||||||||||||| Sbjct: 8426 gaatggcatcttggaggcct 8407
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tgggtgttgtgggtgacctg 58 |||||||||||||||||||| Sbjct: 1836997 tgggtgttgtgggtgacctg 1836978
>gb|AF325155.1|AF325155 Spodoptera litura nucleopolyhedrovirus strain G2, complete genome Length = 139342 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 aaaactttgaagagtatcaggtat 26 ||||||||||||||||||| |||| Sbjct: 59152 aaaactttgaagagtatcatgtat 59129
>gb|AC073052.5| Homo sapiens BAC clone RP11-92F20 from 2, complete sequence Length = 127070 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 aaggatatggatgattctgt 459 |||||||||||||||||||| Sbjct: 64571 aaggatatggatgattctgt 64552
>gb|AC016683.7| Homo sapiens BAC clone RP11-65I12 from 2, complete sequence Length = 179937 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 ggatgattctgtgatgaaga 467 |||||||||||||||||||| Sbjct: 80027 ggatgattctgtgatgaaga 80046
>emb|X58741.1|HSHCKE69 H.sapiens HCK gene for tyrosine kinase (PTK), exons 6-9 Length = 5268 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 gaatggcatcttggaggcct 338 |||||||||||||||||||| Sbjct: 808 gaatggcatcttggaggcct 789
>gb|L47327.1|ANATAL Anabaena variabilis transaldolase (tal) gene, complete cds Length = 1260 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 attctcgtgctttggtgata 185 |||||||||||||||||||| Sbjct: 495 attctcgtgctttggtgata 476
>emb|CT005243.3| Pan troglodytes chromosome X clone RP43-008I08 map Xq28, complete sequence Length = 180222 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 aaaactttgaagagtatcag 22 |||||||||||||||||||| Sbjct: 172102 aaaactttgaagagtatcag 172121 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,810,511 Number of Sequences: 3902068 Number of extensions: 3810511 Number of successful extensions: 79239 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79124 Number of HSP's gapped (non-prelim): 115 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)