ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet03a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108268.1| Zea mays PCO078526 mRNA sequence 287 1e-74
2ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA 260 3e-66
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 260 3e-66
4dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 260 3e-66
5dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 260 3e-66
6dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
7dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
8dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 8e-64
9gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma... 72 2e-09
10gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1)... 72 2e-09
11emb|X76131.1|SOATPCG S.oleracea (monatol) chloroplast ATP syntha... 66 1e-07
12emb|Y00758.1|SOATPG Spinach plastid atpC mRNA for ATP synthase g... 66 1e-07
13emb|X17257.1|SOATPC Spinach AtpC gene for chloroplast ATP syntha... 66 1e-07
14gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sytha... 66 1e-07
15emb|Z00018.1|RBATP R.blasticus atp operon coding for the 5 subun... 50 0.006
16gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP ... 50 0.006
17gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 48 0.023
18emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 46 0.090
19ref|XM_525566.1| PREDICTED: Pan troglodytes similar to smootheli... 44 0.36
20gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
21ref|XM_653752.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.36
22emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete ch... 44 0.36
23gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.36
24emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plast... 44 0.36
25dbj|AK128627.1| Homo sapiens cDNA FLJ46786 fis, clone TRACH30288... 44 0.36
26dbj|AK095930.1| Homo sapiens cDNA FLJ38611 fis, clone HEART20056... 44 0.36
27dbj|AK092684.1| Homo sapiens cDNA FLJ35365 fis, clone SKMUS20008... 44 0.36
28dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
29gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22,... 44 0.36
30gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.36
31gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.4
32gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.4
33emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.4
34gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.4
35gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.4
36gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, co... 42 1.4
37gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
38gb|AC154901.1| Prunus persica (peach) BAC clone 82I18, complete ... 40 5.5
39ref|XM_550300.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
40ref|NM_191592.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
41ref|XM_512476.1| PREDICTED: Pan troglodytes myosin IXB (LOC45582... 40 5.5
42gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 5.5
43gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 5.5
44ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA 40 5.5
45gb|DQ481115.1| Uncultured bacterium clone RT-250_16 membrane bou... 40 5.5
46gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.5
47gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Can... 40 5.5
48gb|AY386263.1| Orf virus strain OV-IA82, complete genome 40 5.5
49gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete se... 40 5.5
50emb|AL161637.13| Human DNA sequence from clone RP3-393B19 on chr... 40 5.5
51emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.5
52emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.5
53emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 5.5
54emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 5.5
55emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 5.5
56emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 5.5
57gb|AC020913.9| Homo sapiens chromosome 19 clone CTD-3032J10, com... 40 5.5
58gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete s... 40 5.5
59gb|AC118558.2| Homo sapiens chromosome 1 clone RP11-524M5, compl... 40 5.5
60gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform... 40 5.5
61dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
62dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
63gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.5
64dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, par... 40 5.5
65gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Canc... 40 5.5
66gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, c... 40 5.5
67gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.5
68dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 5.5
69dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
70dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
71dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
72gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 5.5
73dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
74gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds 40 5.5
75gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
76emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa... 40 5.5
77emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.5 
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence
          Length = 1437

 Score =  287 bits (145), Expect = 1e-74
 Identities = 187/201 (93%)
 Strand = Plus / Plus

                                                                       
Query: 214 tggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgcaga 273
           |||||||||| |||||||| || ||||||| |||||||||||| ||| | ||||||||||
Sbjct: 196 tggtgcggtgttccctccgtgagctccgcacccgcatcgactccgtcaggaacacgcaga 255

                                                                       
Query: 274 agatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggccg 333
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 256 agatcacggaggccatgaagctggtggccgccgccaaggtccggcgcgcgcaggaggccg 315

                                                                       
Query: 334 tggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaaccagg 393
           | |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 316 tcgtctcctctcgccctttctcggaggcgctggtggaggtgctctacaacatgaaccagg 375

                                
Query: 394 agatccagtcggaggacatcg 414
           |||||||| ||||||||||||
Sbjct: 376 agatccagacggaggacatcg 396



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 118 cagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgcgcttgccagca 174
           ||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||
Sbjct: 94  cagccatgtcgtgctcccacctctccaccgcctggtcctcctcggcgctcgccagca 150
to top
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1469

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Plus

                                                                       
Query: 212 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204

                                                                       
Query: 272 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
           |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264

                                                                       
Query: 332 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324

                                  
Query: 392 ggagatccagtcggaggacatcg 414
           |||||||||| ||||||||||||
Sbjct: 325 ggagatccagacggaggacatcg 347



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 116 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
           |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 43  gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 90
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                            
Query: 212      ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
                ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 19603736 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 19603677

                                                                            
Query: 272      gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
                |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 19603676 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 19603617

                                                                            
Query: 332      cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
                 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 19603616 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 19603557

                                       
Query: 392      ggagatccagtcggaggacatcg 414
                |||||||||| ||||||||||||
Sbjct: 19603556 ggagatccagacggaggacatcg 19603534



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                                
Query: 116      gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
                |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 19603838 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 19603791



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 8        ctccacccaaacccaatccaaaatct 33
                ||||||||||||||||||| ||||||
Sbjct: 19603911 ctccacccaaacccaatccgaaatct 19603886
to top
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                          
Query: 212    ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
              ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 147080 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 147021

                                                                          
Query: 272    gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
              |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 147020 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 146961

                                                                          
Query: 332    cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
               ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 146960 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 146901

                                     
Query: 392    ggagatccagtcggaggacatcg 414
              |||||||||| ||||||||||||
Sbjct: 146900 ggagatccagacggaggacatcg 146878



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 116    gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
              |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 147182 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 147135



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 8      ctccacccaaacccaatccaaaatct 33
              ||||||||||||||||||| ||||||
Sbjct: 147255 ctccacccaaacccaatccgaaatct 147230
to top
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Minus

                                                                         
Query: 212   ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
             ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 42386 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 42327

                                                                         
Query: 272   gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
             |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 42326 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 42267

                                                                         
Query: 332   cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
              ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 42266 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 42207

                                    
Query: 392   ggagatccagtcggaggacatcg 414
             |||||||||| ||||||||||||
Sbjct: 42206 ggagatccagacggaggacatcg 42184



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                             
Query: 116   gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
             |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 42488 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 42441



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 8     ctccacccaaacccaatccaaaatct 33
             ||||||||||||||||||| ||||||
Sbjct: 42561 ctccacccaaacccaatccgaaatct 42536
to top
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full
            insert sequence
          Length = 2822

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Plus

                                                                        
Query: 212  ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
            ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 1610 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 1669

                                                                        
Query: 272  gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
            |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 1670 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 1729

                                                                        
Query: 332  cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
             ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1730 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 1789

                                   
Query: 392  ggagatccagtcggaggacatcg 414
            |||||||||| ||||||||||||
Sbjct: 1790 ggagatccagacggaggacatcg 1812



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                            
Query: 116  gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
            |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 1508 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 1555



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 8    ctccacccaaacccaatccaaaatct 33
            ||||||||||||||||||| ||||||
Sbjct: 1435 ctccacccaaacccaatccgaaatct 1460
to top
>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full
           insert sequence
          Length = 1470

 Score =  260 bits (131), Expect = 3e-66
 Identities = 185/203 (91%)
 Strand = Plus / Plus

                                                                       
Query: 212 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204

                                                                       
Query: 272 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
           |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264

                                                                       
Query: 332 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324

                                  
Query: 392 ggagatccagtcggaggacatcg 414
           |||||||||| ||||||||||||
Sbjct: 325 ggagatccagacggaggacatcg 347



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 116 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
           |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 43  gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 90
to top
>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full
           insert sequence
          Length = 1482

 Score =  252 bits (127), Expect = 8e-64
 Identities = 184/203 (90%)
 Strand = Plus / Plus

                                                                       
Query: 212 ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 271
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 250 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 309

                                                                       
Query: 272 gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 331
           |||||||||||||||||||| ||||||||| || |||||||| || || |||||||||||
Sbjct: 310 gaagatcacggaggcgatgaggctggtggcggcggccaaggtgcggcgggcgcaggaggc 369

                                                                       
Query: 332 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 391
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 370 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 429

                                  
Query: 392 ggagatccagtcggaggacatcg 414
           |||||||||| ||||||||||||
Sbjct: 430 ggagatccagacggaggacatcg 452



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 116 gccagccatgtcgtgctcccacctctccaccgcgtggtcctcatccgc 163
           |||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct: 148 gccagccatgtcgtgctcgcacctctccaccgcctggtcctcctccgc 195



 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 8   ctccacccaaacccaatccaaaatct 33
           ||||||||||||||||||| ||||||
Sbjct: 75  ctccacccaaacccaatccgaaatct 100
to top
>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete
           cds
          Length = 1772

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
           ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || 
Sbjct: 171 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 230

                                               
Query: 324 caggaggccgtggtctcctcccgccccttctcggag 359
           |||||||| |||||   |  ||||||||||||||||
Sbjct: 231 caggaggctgtggtgaacggccgccccttctcggag 266
to top
>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene,
           complete CDS
          Length = 2913

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 264 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
           ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || 
Sbjct: 256 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 315

                                               
Query: 324 caggaggccgtggtctcctcccgccccttctcggag 359
           |||||||| |||||   |  ||||||||||||||||
Sbjct: 316 caggaggctgtggtgaacggccgccccttctcggag 351
to top
>emb|X76131.1|SOATPCG S.oleracea (monatol) chloroplast ATP synthase gene gamma subunit
          Length = 5616

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 264  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
            ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 2213 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 2272

                                                                        
Query: 324  caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 383
            || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 2273 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 2332

                 
Query: 384  atgaa 388
            |||||
Sbjct: 2333 atgaa 2337
to top
>emb|Y00758.1|SOATPG Spinach plastid atpC mRNA for ATP synthase gamma-subunit
          Length = 1140

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                       
Query: 264 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
           ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 61  aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 120

                                                                       
Query: 324 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 383
           || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 121 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 180

                
Query: 384 atgaa 388
           |||||
Sbjct: 181 atgaa 185
to top
>emb|X17257.1|SOATPC Spinach AtpC gene for chloroplast ATP synthase gamma-subunit
          Length = 3537

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                       
Query: 264 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
           ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 626 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 685

                                                                       
Query: 324 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 383
           || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 686 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 745

                
Query: 384 atgaa 388
           |||||
Sbjct: 746 atgaa 750
to top
>gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 2168

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 264 aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
           |||||| |||||||||||  |||||||||||| || || ||||||||||| || ||||||
Sbjct: 170 aacacgaagaagatcacgtcggcgatgaagctcgtcgcggccgccaaggtgcgccgcgcg 229

                
Query: 324 cagga 328
           |||||
Sbjct: 230 cagga 234
to top
>emb|Z00018.1|RBATP R.blasticus atp operon coding for the 5 subunits of F1-ATPase and
            8URFs
          Length = 12368

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 264  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
            ||||||| |||||||||| |||||||| || |||| ||||| || ||  | |||||||||
Sbjct: 7573 aacacgcggaagatcacgaaggcgatgcagatggtcgccgcggcgaaacttcgtcgcgcg 7632

                 
Query: 324  cagga 328
            |||||
Sbjct: 7633 cagga 7637
to top
>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma
           subunit mRNA, partial cds; nuclear gene for chloroplast
           product
          Length = 900

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 300 gccgccgccaaggtccgtcgcgcgcaggaggcc 332
           |||||||||||||| || |||||||||||||||
Sbjct: 188 gccgccgccaaggttcgccgcgcgcaggaggcc 220
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 267    acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 326
              ||||||||||||||  |||| ||| || ||||||||||| ||||| | || |||||||||
Sbjct: 486700 acgcagaagatcaccaaggccatgcagatggtggccgcctccaagcttcgccgcgcgcag 486759
to top
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 267    acgcagaagatcacggaggcgatgaagctggtggccgcc 305
              ||||||||||||||  |||||||| || |||||||||||
Sbjct: 197103 acgcagaagatcaccaaggcgatgcagatggtggccgcc 197065
to top
>ref|XM_525566.1| PREDICTED: Pan troglodytes similar to smoothelin isoform b
           (LOC470182), mRNA
          Length = 1584

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 179 cacccgccgccgcgcctccaccggca 204
           ||||||||||||| ||||||||||||
Sbjct: 384 cacccgccgccgctcctccaccggca 409
to top
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0009F15, complete sequence
          Length = 142289

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 179   cacccgccgccgcgcctccacc 200
             ||||||||||||||||||||||
Sbjct: 72492 cacccgccgccgcgcctccacc 72471
to top
>ref|XM_653752.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1240.2), mRNA
          Length = 3348

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 321  gcgcaggaggccgtggtctcct 342
            ||||||||||||||||||||||
Sbjct: 1380 gcgcaggaggccgtggtctcct 1359
to top
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 267    acgcagaagatcacggaggcgatgaagctggtggccgc 304
              ||||||||||||||  ||||||||||| |||| |||||
Sbjct: 246917 acgcagaagatcaccaaggcgatgaagatggtcgccgc 246880
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 272     gaagatcacggaggcgatgaagctgg 297
               |||||||||||| |||||||||||||
Sbjct: 2677233 gaagatcacggaagcgatgaagctgg 2677208
to top
>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase
          Length = 1327

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 271 agaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcagga 328
           ||||||||||   ||| |||||||| || || ||||||||||||||||| || |||||
Sbjct: 243 agaagatcaccatggccatgaagcttgtcgctgccgccaaggtccgtcgtgctcagga 300
to top
>dbj|AK128627.1| Homo sapiens cDNA FLJ46786 fis, clone TRACH3028837, moderately
            similar to Smoothelin
          Length = 4954

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 179  cacccgccgccgcgcctccaccggca 204
            ||||||||||||| ||||||||||||
Sbjct: 3466 cacccgccgccgctcctccaccggca 3491
to top
>dbj|AK095930.1| Homo sapiens cDNA FLJ38611 fis, clone HEART2005610, highly similar
           to Homo sapiens smoothelin large isoform L2 (SMTN) mRNA
          Length = 2938

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 179 cacccgccgccgcgcctccaccggca 204
           ||||||||||||| ||||||||||||
Sbjct: 360 cacccgccgccgctcctccaccggca 385
to top
>dbj|AK092684.1| Homo sapiens cDNA FLJ35365 fis, clone SKMUS2000873, highly similar
           to Smoothelin large isoform L2
          Length = 1736

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 179 cacccgccgccgcgcctccaccggca 204
           ||||||||||||| ||||||||||||
Sbjct: 474 cacccgccgccgctcctccaccggca 499
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 179     cacccgccgccgcgcctccacc 200
               ||||||||||||||||||||||
Sbjct: 4421129 cacccgccgccgcgcctccacc 4421108



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 162292 ccgccgccgcgcctccaccg 162273
to top
>gb|AC005005.1|AC005005 Homo sapiens PAC clone RP3-412A9 from 22, complete sequence
          Length = 133893

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 179   cacccgccgccgcgcctccaccggca 204
             ||||||||||||| ||||||||||||
Sbjct: 84278 cacccgccgccgctcctccaccggca 84253
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 179     cacccgccgccgcgcctccacc 200
               ||||||||||||||||||||||
Sbjct: 4429823 cacccgccgccgcgcctccacc 4429802



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 162292 ccgccgccgcgcctccaccg 162273
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 264    aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
              |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 120264 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 120323

                   
Query: 324    cagga 328
              |||||
Sbjct: 120324 cagga 120328
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 264    aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
              |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 185175 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 185116

                   
Query: 324    cagga 328
              |||||
Sbjct: 185115 cagga 185111
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 264     aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
               |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 4036947 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 4036888

                    
Query: 324     cagga 328
               |||||
Sbjct: 4036887 cagga 4036883
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 267     acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 326
               ||||||||||||||  ||||||||||  |||| ||||| || ||| | || || ||||||
Sbjct: 4103056 acgcagaagatcaccaaggcgatgaaaatggtcgccgcggcgaagcttcggcgtgcgcag 4102997

                    
Query: 327     gaggc 331
               |||||
Sbjct: 4102996 gaggc 4102992
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 267    acgcagaagatcacggaggcgatgaagctggtggccgccgccaag 311
              ||||||||||||||  |||||||| || |||| |||||| |||||
Sbjct: 300262 acgcagaagatcaccaaggcgatgcagatggtcgccgcctccaag 300218
to top
>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence
          Length = 195558

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 131    ctcccacctctccaccgcgtg 151
              |||||||||||||||||||||
Sbjct: 115856 ctcccacctctccaccgcgtg 115836
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 264     aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 323
               |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 3771921 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 3771862

                    
Query: 324     cagga 328
               |||||
Sbjct: 3771861 cagga 3771857
to top
>gb|AC154901.1| Prunus persica (peach) BAC clone 82I18, complete sequence
          Length = 73299

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     tccacccaaacccaatccaa 28
             ||||||||||||||||||||
Sbjct: 50510 tccacccaaacccaatccaa 50491
to top
>ref|XM_550300.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 acccgccgccgcgcctccaccggc 203
           ||||||||||||||| ||||||||
Sbjct: 680 acccgccgccgcgccgccaccggc 657
to top
>ref|NM_191592.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1677

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 acccgccgccgcgcctccaccggc 203
           ||||||||||||||| ||||||||
Sbjct: 970 acccgccgccgcgccgccaccggc 947
to top
>ref|XM_512476.1| PREDICTED: Pan troglodytes myosin IXB (LOC455820), mRNA
          Length = 3700

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  gaagctggtggccgccgcca 309
            ||||||||||||||||||||
Sbjct: 2011 gaagctggtggccgccgcca 2030
to top
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    cggcagcagcctggtggtgcggtg 223
              |||||||||| |||||||||||||
Sbjct: 108746 cggcagcagcatggtggtgcggtg 108723
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 197     caccggcagcagcctggtggtgcg 220
               |||||||||||||| |||||||||
Sbjct: 3381727 caccggcagcagcccggtggtgcg 3381704
to top
>ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA
          Length = 7488

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  gaagctggtggccgccgcca 309
            ||||||||||||||||||||
Sbjct: 3948 gaagctggtggccgccgcca 3967
to top
>gb|DQ481115.1| Uncultured bacterium clone RT-250_16 membrane bound nitrate
           reductase (narG) gene, partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 289 tgaagctggtggccgccgccaagg 312
           |||| |||||||||||||||||||
Sbjct: 254 tgaaactggtggccgccgccaagg 277
to top
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    gaagctggtggccgccgccaaggt 313
              ||||||||||||||||| ||||||
Sbjct: 100372 gaagctggtggccgccggcaaggt 100395
to top
>gb|AC153594.15| Mus musculus 10 BAC RP23-98N14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208555

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cctctccaccgcgtggtcct 156
              ||||||||||||||||||||
Sbjct: 166784 cctctccaccgcgtggtcct 166803
to top
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome
          Length = 137241

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 181   cccgccgccgcgcctccaccggca 204
             ||||||||||||||||| ||||||
Sbjct: 92409 cccgccgccgcgcctcctccggca 92386
to top
>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence
          Length = 111262

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 300   gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 355
             ||||||||||  ||||||||||| || || |||||  ||  |||||||||||||||
Sbjct: 87541 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 87596
to top
>emb|AL161637.13| Human DNA sequence from clone RP3-393B19 on chromosome 1p33-34.3
             Contains a CpG island, complete sequence
          Length = 101954

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ccacccaaacccaatccaaa 29
             ||||||||||||||||||||
Sbjct: 48880 ccacccaaacccaatccaaa 48899
to top
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gccgccggtgacgcgccagc 110
             ||||||||||||||||||||
Sbjct: 22671 gccgccggtgacgcgccagc 22690
to top
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   gcagcagcctggtggtgcgg 221
             ||||||||||||||||||||
Sbjct: 39950 gcagcagcctggtggtgcgg 39931
to top
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     gccgccggtgacgcgccagc 110
              ||||||||||||||||||||
Sbjct: 317252 gccgccggtgacgcgccagc 317271
to top
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    gcagcagcctggtggtgcgg 221
              ||||||||||||||||||||
Sbjct: 303828 gcagcagcctggtggtgcgg 303809
to top
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    gcagcagcctggtggtgcgg 221
              ||||||||||||||||||||
Sbjct: 274890 gcagcagcctggtggtgcgg 274871
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    gccgccggtgacgcgccagc 110
             ||||||||||||||||||||
Sbjct: 56312 gccgccggtgacgcgccagc 56331
to top
>gb|AC020913.9| Homo sapiens chromosome 19 clone CTD-3032J10, complete sequence
          Length = 117751

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   gaagctggtggccgccgcca 309
             ||||||||||||||||||||
Sbjct: 92366 gaagctggtggccgccgcca 92385
to top
>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence
          Length = 137284

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 300   gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 355
             ||||||||||  ||||||||||| || || |||||  ||  |||||||||||||||
Sbjct: 77876 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 77931
to top
>gb|AC118558.2| Homo sapiens chromosome 1 clone RP11-524M5, complete sequence
          Length = 51825

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccacccaaacccaatccaaa 29
            ||||||||||||||||||||
Sbjct: 3968 ccacccaaacccaatccaaa 3949
to top
>gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform PM17 mRNA, complete cds
          Length = 1503

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 ggaggcgatgaagctggtgg 300
           ||||||||||||||||||||
Sbjct: 270 ggaggcgatgaagctggtgg 289
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 155913 ccgccgccgcgcctccaccg 155894
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 180     acccgccgccgcgcctccaccggc 203
               ||||||||||||||| ||||||||
Sbjct: 3835130 acccgccgccgcgccgccaccggc 3835153
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 258  gtccgcaacacgcagaagatcacg 281
            ||||||||||| ||||||||||||
Sbjct: 8433 gtccgcaacacccagaagatcacg 8456
to top
>dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, partial cds, clone:
            ef05385
          Length = 7607

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  gaagctggtggccgccgcca 309
            ||||||||||||||||||||
Sbjct: 4095 gaagctggtggccgccgcca 4114
to top
>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177800

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    cctctccaccgcgtggtcct 156
              ||||||||||||||||||||
Sbjct: 175229 cctctccaccgcgtggtcct 175210
to top
>gb|AC115994.24| Homo sapiens chromosome 17, clone CTD-2535L24, complete sequence
          Length = 242913

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     tctccacccaaacccaatcc 26
             ||||||||||||||||||||
Sbjct: 35560 tctccacccaaacccaatcc 35541
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 187     gccgcgcctccaccggcagcagcc 210
               ||||||||||||||||||| ||||
Sbjct: 4558276 gccgcgcctccaccggcaggagcc 4558299
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     tggccgccgccaaggtccgt 317
               ||||||||||||||||||||
Sbjct: 3031382 tggccgccgccaaggtccgt 3031401
to top
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0089K24
          Length = 154137

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 180    acccgccgccgcgcctccaccggc 203
              ||||||||||||||| ||||||||
Sbjct: 108672 acccgccgccgcgccgccaccggc 108695
to top
>dbj|AK101660.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057J01, full
           insert sequence
          Length = 1975

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 acccgccgccgcgcctccaccggc 203
           ||||||||||||||| ||||||||
Sbjct: 974 acccgccgccgcgccgccaccggc 951
to top
>dbj|AK073313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F03, full
           insert sequence
          Length = 1389

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 acccgccgccgcgcctccaccggc 203
           ||||||||||||||| ||||||||
Sbjct: 680 acccgccgccgcgccgccaccggc 657
to top
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 171     agcacttccacccgccgccg 190
               ||||||||||||||||||||
Sbjct: 1385501 agcacttccacccgccgccg 1385520
to top
>dbj|AK062282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-C06, full
           insert sequence
          Length = 1677

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 180 acccgccgccgcgcctccaccggc 203
           ||||||||||||||| ||||||||
Sbjct: 970 acccgccgccgcgccgccaccggc 947
to top
>gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds
          Length = 6069

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 290  gaagctggtggccgccgcca 309
            ||||||||||||||||||||
Sbjct: 3948 gaagctggtggccgccgcca 3967
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 155913 ccgccgccgcgcctccaccg 155894
to top
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 160673

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 142701 ccgccgccgcgcctccaccg 142720
to top
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 161808

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    ccgccgccgcgcctccaccg 201
              ||||||||||||||||||||
Sbjct: 107522 ccgccgccgcgcctccaccg 107503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,629,152
Number of Sequences: 3902068
Number of extensions: 2629152
Number of successful extensions: 57710
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 56332
Number of HSP's gapped (non-prelim): 1374
length of query: 414
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 392
effective length of database: 17,147,199,772
effective search space: 6721702310624
effective search space used: 6721702310624
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top