ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet03a09 |
|---|---|
| Clone Library Name | barley_pub |
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 62.0 bits (149), Expect = 5e-10 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%) Frame = +2 Query: 68 SSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG---VI 238 S+ F V + V P+ +P T+ L+ VD RG+ ++ +F + + + +I Sbjct: 6 STDFHVKKFDPVMVAPSLPSPKATVQLSVVDSLTICRGIFNTLLVFNAPDNISADPVKII 65 Query: 239 REALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLEDVRFLE 400 REAL K L +++PLAGR+ E G + CT DG F EA+ E ++ +R L+ Sbjct: 66 REALSKVLVYYFPLAGRL-RSKEIGELEVECTGDGALFVEAMVEDTISVLRDLD 118
>DBBT_TAXCU (Q9FPW3) 2-alpha-hydroxytaxane 2-O-benzoyltransferase (EC| 2.3.1.166) (TBT) (2-debenzoyl-7,13-diacetylbaccatin III-2-O-benzoyl transferase) (DBBT) Length = 440 Score = 51.6 bits (122), Expect = 7e-07 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Frame = +2 Query: 77 FKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIF----RSGADAAPG-VIR 241 F V I V P ++P + L L+ +D RGL + ++ R A P IR Sbjct: 4 FNVDMIERVIVAPCLQSPKNILHLSPIDNKT--RGLTNILSVYNASQRVSVSADPAKTIR 61 Query: 242 EALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 379 EAL K L ++ P AGR+ E G + CT +G F EA+A+ L Sbjct: 62 EALSKVLVYYPPFAGRL-RNTENGDLEVECTGEGAVFVEAMADNDL 106
>DBAT_TAXCU (Q9M6E2) 10-deacetylbaccatin III 10-O-acetyltransferase (EC| 2.3.1.167) (DBAT) Length = 440 Score = 51.6 bits (122), Expect = 7e-07 Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%) Frame = +2 Query: 68 SSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAP----GV 235 S+ F V + V P+ +P L L+ +D P R + + + + +D V Sbjct: 4 STEFVVRSLERVMVAPSQPSPKAFLQLSTLDNLPGVRENIFNTLLVYNASDRVSVDPAKV 63 Query: 236 IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 379 IR+AL K L ++ P AGR+ + E G + CT +G F EA+A+ L Sbjct: 64 IRQALSKVLVYYSPFAGRL-RKKENGDLEVECTGEGALFVEAMADTDL 110
>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 51.6 bits (122), Expect = 7e-07 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Frame = +2 Query: 62 MASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPGV-- 235 M + V I + V P+ P TL L+ +D P RG + + + + + + + Sbjct: 1 MEKTDLHVNLIEKVMVGPSPPLPKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMISA 60 Query: 236 -----IREALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 379 IREAL K L ++ P AGR+ E E G + CT +G F EA+A+ L Sbjct: 61 DPAKPIREALAKILVYYPPFAGRLRET-ENGDLEVECTGEGAMFLEAMADNEL 112
>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)| (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase) (Taxadienol acetyltransferase) Length = 439 Score = 49.7 bits (117), Expect = 3e-06 Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 8/99 (8%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVDRYPTHRGLV-ESMHIFRSG-------ADAAPGVIREALGKAL 262 V P+ P TL L+ +D P RG + ++ I+ + AD A +IREAL K L Sbjct: 16 VGPSLPLPKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMVSADPAK-LIREALAKIL 74 Query: 263 AFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSL 379 ++ P AGR+ + E G + CT +G F EA+A+ L Sbjct: 75 VYYPPFAGRL-RETENGDLEVECTGEGAMFLEAMADNEL 112
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 45.4 bits (106), Expect = 5e-05 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 244 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSNIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 245 ALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 385 AL KAL FYP+AGR+ ++ I C A+G F EA + LED Sbjct: 70 ALSKALVPFYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 44.7 bits (104), Expect = 9e-05 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 14/107 (13%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV----------ESMHIFRSGADAAPGVIRE 244 V+PA ETP+ +L L+ +D R P +H G V +++H S A ++ E Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIHPSSSMYFDA-NILIE 69 Query: 245 ALGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 385 AL KAL +YP+AGR+ ++ I C A+G F EA + LED Sbjct: 70 ALSKALVPYYPMAGRLKINGDR--YEIDCNAEGALFVEAESSHVLED 114
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 41.6 bits (96), Expect = 8e-04 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 13/106 (12%) Frame = +2 Query: 107 VKPASETPDHTLPLAWVD---RYP-THRGLV---------ESMHIFRSGADAAPGVIREA 247 V+PA ETP+ +L L+ +D R P +H G V E S ++ EA Sbjct: 11 VRPAEETPNKSLWLSKIDMILRTPYSHTGAVLIYKQPDNNEDNIQPSSSMYFDANILIEA 70 Query: 248 LGKALAFFYPLAGRIVEQPEKGCPAIRCTADGVYFAEAVAECSLED 385 L KAL +YP+AGR+ ++ I C +G F EA + LED Sbjct: 71 LSKALVPYYPMAGRLKINGDR--YEIDCNGEGALFVEAESSHVLED 114
>YACK_RHIME (Q9X447) Hypothetical 80.6 kDa protein in ackA 5'region (ORFA)| Length = 733 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/52 (42%), Positives = 28/52 (53%) Frame = +2 Query: 173 HRGLVESMHIFRSGADAAPGVIREALGKALAFFYPLAGRIVEQPEKGCPAIR 328 H L+E+ I AD A G IREAL +AL F GR+ E+G A+R Sbjct: 587 HHALLENK-IAALKADMAKGGIREALARALLFVGMARGRV---DERGFEAVR 634
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 29.3 bits (64), Expect = 3.9 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 11/92 (11%) Frame = +2 Query: 56 AAMASSSFKVTRISEGAVKPASETPDH--TLPLAWVDRYPTHRGLVESMHIFRSGADAAP 229 A M S++ +V IS+ +KP + TP L+ +D+ V + + + A + Sbjct: 2 ATMYSAAVEV--ISKETIKPTTPTPSQLKNFNLSLLDQCFPLYYYVPIILFYPATAANST 59 Query: 230 G---------VIREALGKALAFFYPLAGRIVE 298 G +++ +L K L FYP+AGR+++ Sbjct: 60 GSSNHHDDLDLLKSSLSKTLVHFYPMAGRMID 91
>GCM1_MOUSE (P70348) Chorion-specific transcription factor GCMa (Glial cells| missing homolog 1) (GCM motif protein 1) (mGCMa) (mGCM1) Length = 436 Score = 29.3 bits (64), Expect = 3.9 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVK--PASETPDHTLPLAW 154 PRP+T A +K+ MAS+S + A K PA +LPL W Sbjct: 155 PRPETKLEAEARRAMKKVHMASASNSLRMKGRPAAKALPAEIPSQGSLPLTW 206
>NMD3B_MOUSE (Q91ZU9) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subunit NR3B) (NR3B) (NMDAR3B) (NMDA receptor NR4) (Nr4) Length = 1003 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>NMD3B_RAT (Q8VHN2) Glutamate [NMDA] receptor subunit 3B precursor| (N-methyl-D-aspartate receptor subtype 3B) (NR3B) (NMDAR3B) Length = 1002 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +1 Query: 1 RASSQDSHAHNRKHTPQRSGHGVVELQGD 87 +AS + HAH R+H+ + HGV L D Sbjct: 707 KASFPEMHAHMRRHSAPTTPHGVAMLTSD 735
>GSA_RHOBA (Q7UPM9) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 439 Score = 28.9 bits (63), Expect = 5.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 297 STMRPASG*KKASALPSASRITPGAASAPDR 205 S RPA+G K +A AS + PG ++P R Sbjct: 8 SAARPAAGPKSVAAFQRASALMPGGVNSPAR 38
>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related| protein 2) Length = 1035 Score = 28.5 bits (62), Expect = 6.7 Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 1/31 (3%) Frame = +2 Query: 221 AAPGVIREALGKALAFFYPLAGRIVE-QPEK 310 AAP I ++LG+ +YP++ R+V+ QP++ Sbjct: 9 AAPMFIHQSLGRKRDLYYPMSNRLVQSQPQR 39
>END4_ENTFA (Q834D0) Probable endonuclease 4 (EC 3.1.21.2) (Endonuclease IV)| (Endodeoxyribonuclease IV) Length = 297 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -1 Query: 292 DAPRQRVEEGQRL-AQRLADHAGGRVGAGPE 203 D RQ +E Q L A ++ H G VGAGPE Sbjct: 89 DFLRQEIERAQALGATQITLHPGAHVGAGPE 119
>MTFA_VIBVY (Q7MN36) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -2 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>MTFA_VIBVU (Q8DFB2) Putative RNA 2'-O-ribose methyltransferase mtfA (EC| 2.1.1.-) Length = 359 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -2 Query: 222 ASAPDRKMCIDSTRPRWVGYRSTHASGSVWSGVSDAGFTAPSEIRVTLKLDDAMAASLRR 43 A P +C ++ + GY +H + + G+ F A + R TLKL++A + R Sbjct: 141 AKKPVFHLCFVASGHCFAGYSYSHNNSRFFMGIPRLKFPADAPSRSTLKLEEAFHVFIPR 200
>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)| (Protein wrinkled) Length = 410 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/45 (26%), Positives = 28/45 (62%) Frame = +2 Query: 5 PRPKTPTRTIANTRLKEAAMASSSFKVTRISEGAVKPASETPDHT 139 P P + + +++++ + A+ +S+S + S+GA AS++P+ T Sbjct: 32 PLPSSASSSVSSSGVSSASASSASSSSSASSDGASSAASQSPNTT 76
>DYHC_DICDI (P34036) Dynein heavy chain, cytosolic (DYHC)| Length = 4725 Score = 28.1 bits (61), Expect = 8.8 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 131 DHTLPLAWVDRYPTHRGLVESMHIFRSGADAAPG 232 DH+ WVD YPT L+ S ++ + D A G Sbjct: 1794 DHSKYSEWVDNYPTQLVLLTSQIVWSTQVDQALG 1827
>AROA_AERSA (Q03321) 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19)| (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) Length = 427 Score = 28.1 bits (61), Expect = 8.8 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 17 TPTRTIANTRLKEA----AMASSSFKVTRISEGAVKPASETPDHTLPLAWVDRYPTHR 178 T R I N R+KE AMA+ K+ EG + + TP L A +D Y HR Sbjct: 329 TSIRNIYNWRVKETDRLHAMATDVRKLGVSEEGDLHYITVTPPTQLKHAEIDTYKHHR 386
>OTX1_HUMAN (P32242) Homeobox protein OTX1| Length = 354 Score = 28.1 bits (61), Expect = 8.8 Identities = 23/83 (27%), Positives = 36/83 (43%) Frame = -2 Query: 333 VQRMAGHPFSGCSTMRPASG*KKASALPSASRITPGAASAPDRKMCIDSTRPRWVGYRST 154 V+ +G SG T S +S+ S+S P AA+A + ST Sbjct: 115 VRESSGSESSGQFTPPAVSSSASSSSSASSSSANPAAAAAAG----LGGNPVAAASSLST 170 Query: 153 HASGSVWSGVSDAGFTAPSEIRV 85 A+ S+WS S + +AP+ + V Sbjct: 171 PAASSIWSPASISPGSAPASVSV 193 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.311 0.133 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,446,833 Number of Sequences: 219361 Number of extensions: 700814 Number of successful extensions: 2130 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2092 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2121 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
