| Clone Name | baet03a05 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 115 bits (289), Expect = 2e-26 Identities = 51/62 (82%), Positives = 57/62 (91%) Frame = +3 Query: 189 RCPQADRQALLRVKQALGNPATLMTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 368 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85 Query: 369 QI 374 QI Sbjct: 86 QI 87
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCC--TWDHLRCD---EAGRVNNVFIDG 350 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSG 88
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCC--TWDHLRCD---EAGRVNNVFIDG 350 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSG 88
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 51.6 bits (122), Expect = 5e-07 Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 5/58 (8%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCC--TWDHLRCD---EAGRVNNVFIDG 350 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSG 88
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 46.6 bits (109), Expect = 1e-05 Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 359 C + D+ LL++K++L NP L +W P DCC+W L C +A RV ++ I DG + Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81 Query: 360 VHGQI 374 + GQI Sbjct: 82 ISGQI 86
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 46.6 bits (109), Expect = 1e-05 Identities = 19/43 (44%), Positives = 27/43 (62%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCCTWDHLRCDEA 320 C Q D+ LL++K++L NP L +W P DCC+W L C +A Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDA 66
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 45.4 bits (106), Expect = 3e-05 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = +3 Query: 192 CPQADRQALLRVKQALGNPATLMTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 368 C D++ LL++K+A G+P L +W + DCC W + CD R+N++ I A V G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84 Query: 369 QI 374 QI Sbjct: 85 QI 86
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 32.7 bits (73), Expect = 0.22 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 201 ADRQALLRVKQALGNP-ATLMTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQI 374 A+ AL +K +L +P L +W CTW H+ C+ V V + A ++ GQ+ Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNA-NLSGQL 84
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 31.2 bits (69), Expect = 0.64 Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%) Frame = +3 Query: 201 ADRQALLRVKQALGNPATLMTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQI 374 ++ +L+ K++L NP+ L +W+ +SA C W + C GRVN++ + + GQI Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQI 81
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 30.8 bits (68), Expect = 0.84 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +3 Query: 204 DRQALLRVKQALGNPATLMTWSPASADCCTWDHLRCDEAGRVNNVFI 344 D A+L +K++L NP + WS D C W H+ C RV + I Sbjct: 28 DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI 71
>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)| Length = 2341 Score = 28.1 bits (61), Expect = 5.4 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -3 Query: 367 PCTSSAPSMKTLFTRPASSHRRWSHVQQSADAGDHVISVA--GLPSACFTRSSACRSACG 194 PC S+ S +L P+S R S V Q +G ++ GLPS+ + SS AC Sbjct: 2147 PCRRSSTSQISLRNLPSSIQSRLSMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIPACK 2204 Query: 193 H 191 H Sbjct: 2205 H 2205
>SYC_BUCAI (P57558) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 464 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 10/52 (19%) Frame = +3 Query: 243 NPATLMTWSPASADCCTWD----------HLRCDEAGRVNNVFIDGADDVHG 368 NP + W ++ + +WD H+ C + NVF + + D+HG Sbjct: 177 NPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECSA---ITNVFFNNSIDIHG 225
>GP46_LEIAM (P21978) Surface membrane glycoprotein GP46/M-2 precursor| Length = 476 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/38 (36%), Positives = 21/38 (55%) Frame = +3 Query: 210 QALLRVKQALGNPATLMTWSPASADCCTWDHLRCDEAG 323 QA R ALG+ TW+ +D C+W+H+ C +G Sbjct: 51 QAFARAIPALGD-----TWT--GSDFCSWEHIICYSSG 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,577,472 Number of Sequences: 219361 Number of extensions: 289359 Number of successful extensions: 1157 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1154 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)