ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet02h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483174.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.59
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.59
3dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.59
4dbj|AK120828.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.59
5ref|NM_184832.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.3
6ref|XM_450704.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.3
7gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complet... 40 2.3
8gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 2.3
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.3
10ref|XM_388988.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 40 2.3
11gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromoso... 40 2.3
12gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete se... 40 2.3
13gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome ... 40 2.3
14dbj|AK155080.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 2.3
15dbj|AK163509.1| Mus musculus adult male corpora quadrigemina cDN... 40 2.3
16dbj|AK156824.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 2.3
17dbj|AK089640.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 2.3
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
20gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genom... 40 2.3
21dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
22dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.3
23gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81... 40 2.3
24emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21... 40 2.3
25emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chro... 40 2.3
26ref|XM_475717.1| Oryza sativa (japonica cultivar-group), predic... 38 9.2
27ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative... 38 9.2
28ref|XM_469757.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.2
29gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 38 9.2
30ref|XM_594487.2| PREDICTED: Bos taurus similar to G-protein coup... 38 9.2
31gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 38 9.2
32gb|BT025414.1| Bos taurus G protein-coupled receptor, family C, ... 38 9.2
33ref|XM_958049.1| Neurospora crassa OR74A hypothetical protein ( ... 38 9.2
34ref|XM_330282.1| Neurospora crassa OR74A hypothetical protein ( ... 38 9.2
35gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.2
36gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, com... 38 9.2
37emb|AL807806.6| Mouse DNA sequence from clone RP23-67K19 on chro... 38 9.2
38gb|AC140207.3| Mus musculus BAC clone RP24-446P10 from chromosom... 38 9.2
39emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete ch... 38 9.2
40emb|CR727895.2|CNS0GOL9 Tetraodon nigroviridis full-length cDNA 38 9.2
41emb|CR727101.2|CNS0GNZ7 Tetraodon nigroviridis full-length cDNA 38 9.2
42emb|CR727021.2|CNS0GNWZ Tetraodon nigroviridis full-length cDNA 38 9.2
43emb|CR726472.2|CNS0GNHQ Tetraodon nigroviridis full-length cDNA 38 9.2
44emb|CR715197.2|CNS0GESP Tetraodon nigroviridis full-length cDNA 38 9.2
45emb|CR713421.2|CNS0GDFD Tetraodon nigroviridis full-length cDNA 38 9.2
46emb|CR705775.2|CNS0G7IZ Tetraodon nigroviridis full-length cDNA 38 9.2
47emb|CR700619.2|CNS0G3JR Tetraodon nigroviridis full-length cDNA 38 9.2
48emb|CR682814.1|CNS0FPT6 Tetraodon nigroviridis full-length cDNA 38 9.2
49emb|CR677305.2|CNS0FLKL Tetraodon nigroviridis full-length cDNA 38 9.2
50emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chro... 38 9.2
51gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare str... 38 9.2
52emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on ch... 38 9.2
53gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare str... 38 9.2
54emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 38 9.2
55emb|AL355931.1|NCB3E4 Neurospora crassa DNA linkage group II BAC... 38 9.2
56gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 9.2
57gb|AC010067.7| Drosophila melanogaster 3L BAC RP98-10I10 (Roswel... 38 9.2
58emb|BX119998.12| Zebrafish DNA sequence from clone CH211-194M11 ... 38 9.2
59dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 38 9.2
60gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, comple... 38 9.2
61gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 38 9.2
62emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 ... 38 9.2
63gb|BC057151.1| Mus musculus ets variant gene 3, mRNA (cDNA clone... 38 9.2
64emb|BX005281.15| Mouse DNA sequence from clone RP23-268A11 on ch... 38 9.2
65dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
66dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
67dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.2
68gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 o... 38 9.2
69dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 9.2
70dbj|AK106780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.2
71dbj|AK099502.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.2
72dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.2
73emb|BX640576.8| Zebrafish DNA sequence from clone DKEY-15H8 in l... 38 9.2
74emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 i... 38 9.2
75dbj|AK059125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.2
76emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 38 9.2
77gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12... 38 9.2
78emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 i... 38 9.2
79emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 38 9.2
80gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 9.2
81gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 38 9.2
82emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb... 38 9.2 
>ref|XM_483174.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2805

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  cgtcggctgcttcctcggcctcgcc 94
           |||||||||| ||||||||||||||
Sbjct: 425 cgtcggctgcctcctcggcctcgcc 449
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 70       cgtcggctgcttcctcggcctcgcc 94
                |||||||||| ||||||||||||||
Sbjct: 24632191 cgtcggctgcctcctcggcctcgcc 24632215
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>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1118_A06
          Length = 92836

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 70   cgtcggctgcttcctcggcctcgcc 94
            |||||||||| ||||||||||||||
Sbjct: 4495 cgtcggctgcctcctcggcctcgcc 4519
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>dbj|AK120828.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019F02, full
           insert sequence
          Length = 2805

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 70  cgtcggctgcttcctcggcctcgcc 94
           |||||||||| ||||||||||||||
Sbjct: 425 cgtcggctgcctcctcggcctcgcc 449
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>ref|NM_184832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  cctcgccttcctcctgctct 107
           ||||||||||||||||||||
Sbjct: 36  cctcgccttcctcctgctct 55
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>ref|XM_450704.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1494

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  gcctcgccttcctcctgctc 106
           ||||||||||||||||||||
Sbjct: 542 gcctcgccttcctcctgctc 561
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>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     caaaaacaaagagcagcaat 54
              ||||||||||||||||||||
Sbjct: 138883 caaaaacaaagagcagcaat 138902
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     cttcctcctgctctgcggcg 113
              ||||||||||||||||||||
Sbjct: 344898 cttcctcctgctctgcggcg 344917
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       cctcgccttcctcctgctct 107
                ||||||||||||||||||||
Sbjct: 21891421 cctcgccttcctcctgctct 21891440



 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 66       ccgccgtcggctgcttcctcggc 88
                ||||||||| |||||||||||||
Sbjct: 30593108 ccgccgtcgcctgcttcctcggc 30593086
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>ref|XM_388988.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08812.1)
            partial mRNA
          Length = 3732

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ctcgccttcctcctgctctg 108
            ||||||||||||||||||||
Sbjct: 1077 ctcgccttcctcctgctctg 1058
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>gb|AC127683.10| Mus musculus BAC clone RP24-171F12 from chromosome 7, complete sequence
          Length = 158570

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 79    cttcctcggcctcgccttcctcctgctc 106
             |||||||||||||  |||||||||||||
Sbjct: 72633 cttcctcggcctcttcttcctcctgctc 72660
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>gb|AC131249.43| Medicago truncatula clone mth2-8p18, complete sequence
          Length = 104866

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctagaaaccaaaaacaaaga 46
             ||||||||||||||||||||
Sbjct: 79573 ctagaaaccaaaaacaaaga 79554
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>gb|AC164100.2| Mus musculus BAC clone RP23-11E1 from chromosome 14, complete sequence
          Length = 214128

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tagaaaccaaaaacaaagag 47
             ||||||||||||||||||||
Sbjct: 32442 tagaaaccaaaaacaaagag 32423
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>dbj|AK155080.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630119N13
           product:ets variant gene 3, full insert sequence
          Length = 3821

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 97  cctcctgctctgcggcgccgtccg 120
           ||||||||||| ||||||||||||
Sbjct: 50  cctcctgctctccggcgccgtccg 27
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>dbj|AK163509.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230318C09
           product:ets variant gene 3, full insert sequence
          Length = 2154

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 97  cctcctgctctgcggcgccgtccg 120
           ||||||||||| ||||||||||||
Sbjct: 54  cctcctgctctccggcgccgtccg 31
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>dbj|AK156824.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830102B14 product:ets variant gene 3,
           full insert sequence
          Length = 4507

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 97  cctcctgctctgcggcgccgtccg 120
           ||||||||||| ||||||||||||
Sbjct: 34  cctcctgctctccggcgccgtccg 11
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>dbj|AK089640.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
           library, clone:F830006F14 product:ETS-domain protein,
           full insert sequence
          Length = 4119

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 97  cctcctgctctgcggcgccgtccg 120
           ||||||||||| ||||||||||||
Sbjct: 36  cctcctgctctccggcgccgtccg 13
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 87       gcctcgccttcctcctgctc 106
                ||||||||||||||||||||
Sbjct: 12316552 gcctcgccttcctcctgctc 12316571
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       cctcgccttcctcctgctct 107
                ||||||||||||||||||||
Sbjct: 21884450 cctcgccttcctcctgctct 21884469



 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 66       ccgccgtcggctgcttcctcggc 88
                ||||||||| |||||||||||||
Sbjct: 30684530 ccgccgtcgcctgcttcctcggc 30684508
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>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
              sequence
          Length = 127210

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     cctcgccttcctcctgctct 107
              ||||||||||||||||||||
Sbjct: 117595 cctcgccttcctcctgctct 117576
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gcctcgccttcctcctgctc 106
              ||||||||||||||||||||
Sbjct: 100106 gcctcgccttcctcctgctc 100125
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>dbj|AK111441.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-A07, full
           insert sequence
          Length = 2154

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  cctcgccttcctcctgctct 107
           ||||||||||||||||||||
Sbjct: 336 cctcgccttcctcctgctct 355
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>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete
             sequence
          Length = 298116

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    caaaaacaaagagcagcaat 54
             ||||||||||||||||||||
Sbjct: 29418 caaaaacaaagagcagcaat 29437
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>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3,
             complete sequence
          Length = 121331

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ctagaaaccaaaaacaaaga 46
             ||||||||||||||||||||
Sbjct: 23981 ctagaaaccaaaaacaaaga 23962
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>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete
             sequence
          Length = 200375

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    tagaaaccaaaaacaaagag 47
             ||||||||||||||||||||
Sbjct: 11068 tagaaaccaaaaacaaagag 11087
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>ref|XM_475717.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 414

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  cctcgccttcctcctgctc 106
           |||||||||||||||||||
Sbjct: 24  cctcgccttcctcctgctc 42
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>ref|NM_196409.1| Oryza sativa (japonica cultivar-group) putative homeotic protein
            (OSJNBb0044I14.6), mRNA
          Length = 1056

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 100  cctgctctgcggcgccgtc 118
            |||||||||||||||||||
Sbjct: 984  cctgctctgcggcgccgtc 1002
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>ref|XM_469757.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2192

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 66  ccgccgtcggctgcttcctcggc 88
           ||||||||| |||||||||||||
Sbjct: 424 ccgccgtcgcctgcttcctcggc 402
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 98      ctcctgctctgcggcgccg 116
               |||||||||||||||||||
Sbjct: 1094937 ctcctgctctgcggcgccg 1094919
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>ref|XM_594487.2| PREDICTED: Bos taurus similar to G-protein coupled receptor family
           C group 5 member B precursor (Retinoic acid induced gene
           2 protein) (RAIG-2) (A-69G12.1) (LOC516334), partial
           mRNA
          Length = 2666

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  ctcgccttcctcctgctct 107
           |||||||||||||||||||
Sbjct: 320 ctcgccttcctcctgctct 338
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 78      gcttcctcggcctcgccttcctc 100
               ||||||||| |||||||||||||
Sbjct: 2256870 gcttcctcgacctcgccttcctc 2256892
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>gb|BT025414.1| Bos taurus G protein-coupled receptor, family C, group 5, member B
           (GPRC5B), mRNA, complete cds
          Length = 1321

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  ctcgccttcctcctgctct 107
           |||||||||||||||||||
Sbjct: 132 ctcgccttcctcctgctct 150
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>ref|XM_958049.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
           B3E4.300 [imported] - Neurospora crassa OR74A )
           (NCU09633.1) partial mRNA
          Length = 486

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 47  gcagcaatggccacgccctccgc 69
           |||||||||||||| ||||||||
Sbjct: 481 gcagcaatggccacaccctccgc 459
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>ref|XM_330282.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
           B3E4.300 [imported] - Neurospora crassa OR74A )
           (NCU09633.1) partial mRNA
          Length = 486

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 47  gcagcaatggccacgccctccgc 69
           |||||||||||||| ||||||||
Sbjct: 481 gcagcaatggccacaccctccgc 459
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>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
             complete sequence
          Length = 143073

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 88    cctcgccttcctcctgctc 106
             |||||||||||||||||||
Sbjct: 90855 cctcgccttcctcctgctc 90873
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>gb|AC161042.4| Mus musculus chromosome 8, clone RP24-278L20, complete sequence
          Length = 174823

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     gaaaccaaaaacaaagagc 48
              |||||||||||||||||||
Sbjct: 140637 gaaaccaaaaacaaagagc 140619
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>emb|AL807806.6| Mouse DNA sequence from clone RP23-67K19 on chromosome X, complete
             sequence
          Length = 128018

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 37    aaaacaaagagcagcaatg 55
             |||||||||||||||||||
Sbjct: 63957 aaaacaaagagcagcaatg 63939
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>gb|AC140207.3| Mus musculus BAC clone RP24-446P10 from chromosome 18, complete sequence
          Length = 185316

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 34     ccaaaaacaaagagcagcaatgg 56
              ||||||||||||||||| |||||
Sbjct: 114150 ccaaaaacaaagagcagaaatgg 114172
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>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12
          Length = 294800

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 92     gccttcctcctgctctgcg 110
              |||||||||||||||||||
Sbjct: 202205 gccttcctcctgctctgcg 202223
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>emb|CR727895.2|CNS0GOL9 Tetraodon nigroviridis full-length cDNA
          Length = 1041

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 357 cctgctctgcggcgccgtc 339
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>emb|CR727101.2|CNS0GNZ7 Tetraodon nigroviridis full-length cDNA
          Length = 1043

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 360 cctgctctgcggcgccgtc 342
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>emb|CR727021.2|CNS0GNWZ Tetraodon nigroviridis full-length cDNA
          Length = 1057

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 374 cctgctctgcggcgccgtc 356
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>emb|CR726472.2|CNS0GNHQ Tetraodon nigroviridis full-length cDNA
          Length = 997

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 383 cctgctctgcggcgccgtc 365
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>emb|CR715197.2|CNS0GESP Tetraodon nigroviridis full-length cDNA
          Length = 1037

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 377 cctgctctgcggcgccgtc 359
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>emb|CR713421.2|CNS0GDFD Tetraodon nigroviridis full-length cDNA
          Length = 881

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 208 cctgctctgcggcgccgtc 190
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>emb|CR705775.2|CNS0G7IZ Tetraodon nigroviridis full-length cDNA
          Length = 1036

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 376 cctgctctgcggcgccgtc 358
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>emb|CR700619.2|CNS0G3JR Tetraodon nigroviridis full-length cDNA
          Length = 1036

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 355 cctgctctgcggcgccgtc 337
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>emb|CR682814.1|CNS0FPT6 Tetraodon nigroviridis full-length cDNA
          Length = 1004

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 356 cctgctctgcggcgccgtc 338
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>emb|CR677305.2|CNS0FLKL Tetraodon nigroviridis full-length cDNA
          Length = 1020

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 cctgctctgcggcgccgtc 118
           |||||||||||||||||||
Sbjct: 374 cctgctctgcggcgccgtc 356
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>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete
             sequence
          Length = 97057

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 28    tagaaaccaaaaacaaagagcag 50
             ||||||||||||| |||||||||
Sbjct: 23019 tagaaaccaaaaaaaaagagcag 22997
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>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0044A10, from chromosome 10, complete sequence
          Length = 173374

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    cctgctctgcggcgccgtc 118
              |||||||||||||||||||
Sbjct: 137091 cctgctctgcggcgccgtc 137109
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>emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on chromosome 9 Contains the
              gene for cell cycle related kinase (CCRK,CDCH), two novel
              pseudogenes, a 40S ribosomal protein S10 pseudogene
              (RPS10P3), a pseudogene similar to part of a novel protein
              and two CpG islands, complete sequence
          Length = 207295

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     cctcgccttcctcctgctc 106
              |||||||||||||||||||
Sbjct: 165754 cctcgccttcctcctgctc 165772
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>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0044I14, from Chromosome 10, complete sequence
          Length = 63167

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 100   cctgctctgcggcgccgtc 118
             |||||||||||||||||||
Sbjct: 39451 cctgctctgcggcgccgtc 39433
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 84     tcggcctcgccttcctcctgctc 106
              ||||||| |||||||||||||||
Sbjct: 119638 tcggcctggccttcctcctgctc 119616
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>emb|AL355931.1|NCB3E4 Neurospora crassa DNA linkage group II BAC clone B3E4
          Length = 62421

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 47    gcagcaatggccacgccctccgc 69
             |||||||||||||| ||||||||
Sbjct: 60481 gcagcaatggccacaccctccgc 60503
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 90      tcgccttcctcctgctctgcggcgccg 116
               |||||||| ||||| ||||||||||||
Sbjct: 1792849 tcgccttcttcctgttctgcggcgccg 1792823
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>gb|AC010067.7| Drosophila melanogaster 3L BAC RP98-10I10 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 179856

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 29     agaaaccaaaaacaaagag 47
              |||||||||||||||||||
Sbjct: 148987 agaaaccaaaaacaaagag 148969
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>emb|BX119998.12| Zebrafish DNA sequence from clone CH211-194M11 in linkage group 10,
              complete sequence
          Length = 137763

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 33     accaaaaacaaagagcagcaatg 55
              ||||||||||||||||| |||||
Sbjct: 118759 accaaaaacaaagagcaacaatg 118737
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 79     cttcctcggcctcgccttc 97
              |||||||||||||||||||
Sbjct: 752546 cttcctcggcctcgccttc 752564
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>gb|AC091934.2| Homo sapiens chromosome 5 clone RP11-31J6, complete sequence
          Length = 132832

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 87     gcctcgccttcctcctgctctgc 109
              ||||||||| |||||||||||||
Sbjct: 110407 gcctcgcctgcctcctgctctgc 110429
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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
              sequence
          Length = 139872

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 66     ccgccgtcggctgcttcctcggc 88
              ||||||||| |||||||||||||
Sbjct: 124681 ccgccgtcgcctgcttcctcggc 124659
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>emb|BX571694.10| Zebrafish DNA sequence from clone CH211-159E21 in linkage group 10,
             complete sequence
          Length = 163542

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    aaaccaaaaacaaagagca 49
             |||||||||||||||||||
Sbjct: 92137 aaaccaaaaacaaagagca 92119
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>gb|BC057151.1| Mus musculus ets variant gene 3, mRNA (cDNA clone IMAGE:5329552)
          Length = 2165

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 97  cctcctgctctgcggcgccgtcc 119
           ||||||||||| |||||||||||
Sbjct: 23  cctcctgctctccggcgccgtcc 1
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>emb|BX005281.15| Mouse DNA sequence from clone RP23-268A11 on chromosome X, complete
             sequence
          Length = 60173

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 37    aaaacaaagagcagcaatg 55
             |||||||||||||||||||
Sbjct: 39049 aaaacaaagagcagcaatg 39067
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 53       atggccacgccctccgccg 71
                |||||||||||||||||||
Sbjct: 21256745 atggccacgccctccgccg 21256763
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 100      cctgctctgcggcgccgtc 118
                |||||||||||||||||||
Sbjct: 13290842 cctgctctgcggcgccgtc 13290860
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 88       cctcgccttcctcctgctc 106
                |||||||||||||||||||
Sbjct: 25450494 cctcgccttcctcctgctc 25450512
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>gb|AE004771.1| Pseudomonas aeruginosa PAO1, section 332 of 529 of the complete
            genome
          Length = 10944

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 53   atggccacgccctccgccg 71
            |||||||||||||||||||
Sbjct: 8617 atggccacgccctccgccg 8635
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 67     cgccgtcggctgcttcctcggcctcgccttc 97
              |||||||||| |||| | |||||||||||||
Sbjct: 154749 cgccgtcggcggcttgcgcggcctcgccttc 154779
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>dbj|AK106780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-H04, full
           insert sequence
          Length = 824

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 88  cctcgccttcctcctgctc 106
           |||||||||||||||||||
Sbjct: 101 cctcgccttcctcctgctc 119
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>dbj|AK099502.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028J05,
          full insert sequence
          Length = 1550

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 53 atggccacgccctccgccg 71
          |||||||||||||||||||
Sbjct: 47 atggccacgccctccgccg 65
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>dbj|AK073110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023H22, full
           insert sequence
          Length = 2424

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 66  ccgccgtcggctgcttcctcggc 88
           ||||||||| |||||||||||||
Sbjct: 637 ccgccgtcgcctgcttcctcggc 615
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>emb|BX640576.8| Zebrafish DNA sequence from clone DKEY-15H8 in linkage group 22,
            complete sequence
          Length = 182280

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 33   accaaaaacaaagagcagcaatg 55
            ||||||||||||||||| |||||
Sbjct: 3352 accaaaaacaaagagcaacaatg 3330
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>emb|BX469886.5| Zebrafish DNA sequence from clone CH211-127D20 in linkage group 19,
             complete sequence
          Length = 151598

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 33    accaaaaacaaagagcagcaatg 55
             ||||| |||||||||||||||||
Sbjct: 18195 accaacaacaaagagcagcaatg 18173
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>dbj|AK059125.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F10,
          full insert sequence
          Length = 1463

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 53 atggccacgccctccgccg 71
          |||||||||||||||||||
Sbjct: 65 atggccacgccctccgccg 83
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
              sequence
          Length = 140069

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     ctcgccttcctcctgctct 107
              |||||||||||||||||||
Sbjct: 125562 ctcgccttcctcctgctct 125580
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>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete
              sequence
          Length = 317354

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 29     agaaaccaaaaacaaagag 47
              |||||||||||||||||||
Sbjct: 277187 agaaaccaaaaacaaagag 277205
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>emb|BX005088.4| Zebrafish DNA sequence from clone CH211-160E15 in linkage group 9,
              complete sequence
          Length = 193489

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 33     accaaaaacaaagagcagcaatg 55
              ||||||||||||||||| |||||
Sbjct: 187852 accaaaaacaaagagcaacaatg 187874
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     cgtcggctgcttcctcggc 88
              |||||||||||||||||||
Sbjct: 224661 cgtcggctgcttcctcggc 224679
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 100      cctgctctgcggcgccgtc 118
                |||||||||||||||||||
Sbjct: 13298182 cctgctctgcggcgccgtc 13298200
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 53       atggccacgccctccgccg 71
                |||||||||||||||||||
Sbjct: 21182954 atggccacgccctccgccg 21182972
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>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    atggccacgccctccgccg 71
             |||||||||||||||||||
Sbjct: 33455 atggccacgccctccgccg 33437


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,273,227
Number of Sequences: 3902068
Number of extensions: 1273227
Number of successful extensions: 118967
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117913
Number of HSP's gapped (non-prelim): 1054
length of query: 186
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 164
effective length of database: 17,147,199,772
effective search space: 2812140762608
effective search space used: 2812140762608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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