ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet02h03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 902 bits (455), Expect = 0.0 Identities = 473/479 (98%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2144 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 2085 Query: 61 tggggtgatgaagacctggaaattgttgatgcaagtgctgtgatagaaaatggagatgct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2084 tggggtgatgaagacctggaaattgttgatgcaagtgctgtgatagaaaatggagatgct 2025 Query: 121 ggccatgccgatgaaagtgaaacaaatgaagaggatggggaagaggaaggtggctgggac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2024 ggccatgccgatgaaagtgaaacaaatgaagaggatggggaagaggaaggtggctgggac 1965 Query: 181 ctggaagatctggaattgccgccggaggcagatacaccaaaagctactggtgcggcccgc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1964 ctggaagatctggaattgccgccggaggcagatacaccaaaagctactggtgcggcccgt 1905 Query: 241 tctgctttgtttgtggctcccacacccggcatgcctgtcagtcaaatttggactcagaag 300 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1904 tctgctttgtttgtggctcccacacctggcatgcctgtcagtcaaatttggactcagaag 1845 Query: 301 tcatctcttgctggggagcatgctgcagctgggaattttgacacagcaatgcgtctgctt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 tcatctcttgctggggagcatgctgcagctgggaattttgacacagcaatgcgtctgctt 1785 Query: 361 agccgccaattgggcatcaagaactttgctcctctgaaggccttgtttcttgatgcgcat 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1784 agccgccaattgggcatcaagaactttgctcctctgaaggccttgtttcttgatgcgcat 1725 Query: 421 atgggcagtcacacctttctgcgtgcattttgcagtgctccagtgatacctgttgctgt 479 |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1724 atgggcagtcacacctttctgcgtgcatttgcaagtgctccagtaatacctgttgctgt 1666
>ref|XM_469514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| |||||||| |||||||||||| | | ||| || ||||| || |||||| Sbjct: 2623 gaggaaggtggttgggacctagaagatctggaacttctgcctgaagcagagaccccaaaa 2682 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 | |||| || ||||| || | || || ||||| |||| |||||||||||||| Sbjct: 2683 aatgctggcaatgcacgctcagcggtcttcgttgctcctccaccaggcatgcctgtcagc 2742 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 | |||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 2743 ctgatttggactcagaaatcttctcttgctggggagcatgcagcagcagggaactttgac 2802 Query: 343 acagcaatgcgtctgcttagccgccaattgggcatcaagaactttgctcctctgaaggcc 402 || |||||| | ||||||| ||||| |||||||| || ||||||||||| || ||| || Sbjct: 2803 actgcaatgaggttgcttagtcgccagttgggcataaaaaactttgctcccctcaagccc 2862 Query: 403 ttgtttcttgatgcgcatatgggcag 428 ||||||||||| ||| |||||||| Sbjct: 2863 ctgtttcttgatctgcacatgggcag 2888 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 2461 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 2520 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| | |||||| |||||||||||||| Sbjct: 2521 tggggtgatgagggcctggatattgttgatgcaag 2555
>ref|XM_469513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3657 Score = 139 bits (70), Expect = 9e-30 Identities = 142/166 (85%) Strand = Plus / Plus Query: 263 cacccggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatg 322 |||| |||||||||||||| | |||||||||||||| || ||||||||||||||||||| Sbjct: 2723 caccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatg 2782 Query: 323 ctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaaga 382 | ||||| ||||| |||||||| |||||| | ||||||||||||| |||||||| || | Sbjct: 2783 ccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaa 2842 Query: 383 actttgctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||||| || ||| || ||||| ||||| ||| |||||||| Sbjct: 2843 actttgctcccctcaagcccctgtttgttgatctgcacatgggcag 2888 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 2461 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 2520 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 2521 tggggtgatgaggacctggatatggttgatgcaag 2555 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 ||||||||||| |||||||| |||||||||||| | ||||| || ||||| Sbjct: 2623 gaggaaggtggttgggacctagaagatctggaacttccgcctgaagcaga 2672
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| |||||||| |||||||||||| | | ||| || ||||| || |||||| Sbjct: 28437312 gaggaaggtggttgggacctagaagatctggaacttctgcctgaagcagagaccccaaaa 28437253 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 | |||| || ||||| || | || || ||||| |||| |||||||||||||| Sbjct: 28437252 aatgctggcaatgcacgctcagcggtcttcgttgctcctccaccaggcatgcctgtcagc 28437193 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 | |||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 28437192 ctgatttggactcagaaatcttctcttgctggggagcatgcagcagcagggaactttgac 28437133 Query: 343 acagcaatgcgtctgcttagccgccaattgggcatcaagaactttgctcctctgaaggcc 402 || |||||| | ||||||| ||||| |||||||| || ||||||||||| || ||| || Sbjct: 28437132 actgcaatgaggttgcttagtcgccagttgggcataaaaaactttgctcccctcaagccc 28437073 Query: 403 ttgtttcttgatgcgcatatgggcag 428 ||||||||||| ||| |||||||| Sbjct: 28437072 ctgtttcttgatctgcacatgggcag 28437047 Score = 139 bits (70), Expect = 9e-30 Identities = 142/166 (85%) Strand = Plus / Minus Query: 263 cacccggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatg 322 |||| |||||||||||||| | |||||||||||||| || ||||||||||||||||||| Sbjct: 28425820 caccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatg 28425761 Query: 323 ctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaaga 382 | ||||| ||||| |||||||| |||||| | ||||||||||||| |||||||| || | Sbjct: 28425760 ccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaa 28425701 Query: 383 actttgctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||||| || ||| || ||||| ||||| ||| |||||||| Sbjct: 28425700 actttgctcccctcaagcccctgtttgttgatctgcacatgggcag 28425655 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 28437474 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 28437415 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| | |||||| |||||||||||||| Sbjct: 28437414 tggggtgatgagggcctggatattgttgatgcaag 28437380 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 28426082 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 28426023 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 28426022 tggggtgatgaggacctggatatggttgatgcaag 28425988 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 ||||||||||| |||||||| |||||||||||| | ||||| || ||||| Sbjct: 28425920 gaggaaggtggttgggacctagaagatctggaacttccgcctgaagcaga 28425871
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| |||||||| |||||||||||| | | ||| || ||||| || |||||| Sbjct: 28528636 gaggaaggtggttgggacctagaagatctggaacttctgcctgaagcagagaccccaaaa 28528577 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 | |||| || ||||| || | || || ||||| |||| |||||||||||||| Sbjct: 28528576 aatgctggcaatgcacgctcagcggtcttcgttgctcctccaccaggcatgcctgtcagc 28528517 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 | |||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 28528516 ctgatttggactcagaaatcttctcttgctggggagcatgcagcagcagggaactttgac 28528457 Query: 343 acagcaatgcgtctgcttagccgccaattgggcatcaagaactttgctcctctgaaggcc 402 || |||||| | ||||||| ||||| |||||||| || ||||||||||| || ||| || Sbjct: 28528456 actgcaatgaggttgcttagtcgccagttgggcataaaaaactttgctcccctcaagccc 28528397 Query: 403 ttgtttcttgatgcgcatatgggcag 428 ||||||||||| ||| |||||||| Sbjct: 28528396 ctgtttcttgatctgcacatgggcag 28528371 Score = 139 bits (70), Expect = 9e-30 Identities = 142/166 (85%) Strand = Plus / Minus Query: 263 cacccggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatg 322 |||| |||||||||||||| | |||||||||||||| || ||||||||||||||||||| Sbjct: 28517144 caccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatg 28517085 Query: 323 ctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaaga 382 | ||||| ||||| |||||||| |||||| | ||||||||||||| |||||||| || | Sbjct: 28517084 ccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaa 28517025 Query: 383 actttgctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||||| || ||| || ||||| ||||| ||| |||||||| Sbjct: 28517024 actttgctcccctcaagcccctgtttgttgatctgcacatgggcag 28516979 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 28528798 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 28528739 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| | |||||| |||||||||||||| Sbjct: 28528738 tggggtgatgagggcctggatattgttgatgcaag 28528704 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 28517406 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 28517347 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 28517346 tggggtgatgaggacctggatatggttgatgcaag 28517312 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 ||||||||||| |||||||| |||||||||||| | ||||| || ||||| Sbjct: 28517244 gaggaaggtggttgggacctagaagatctggaacttccgcctgaagcaga 28517195
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| |||||||| |||||||||||| | | ||| || ||||| || |||||| Sbjct: 31442 gaggaaggtggttgggacctagaagatctggaacttctgcctgaagcagagaccccaaaa 31383 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 | |||| || ||||| || | || || ||||| |||| |||||||||||||| Sbjct: 31382 aatgctggcaatgcacgctcagcggtcttcgttgctcctccaccaggcatgcctgtcagc 31323 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 | |||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 31322 ctgatttggactcagaaatcttctcttgctggggagcatgcagcagcagggaactttgac 31263 Query: 343 acagcaatgcgtctgcttagccgccaattgggcatcaagaactttgctcctctgaaggcc 402 || |||||| | ||||||| ||||| |||||||| || ||||||||||| || ||| || Sbjct: 31262 actgcaatgaggttgcttagtcgccagttgggcataaaaaactttgctcccctcaagccc 31203 Query: 403 ttgtttcttgatgcgcatatgggcag 428 ||||||||||| ||| |||||||| Sbjct: 31202 ctgtttcttgatctgcacatgggcag 31177 Score = 139 bits (70), Expect = 9e-30 Identities = 142/166 (85%) Strand = Plus / Minus Query: 263 cacccggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatg 322 |||| |||||||||||||| | |||||||||||||| || ||||||||||||||||||| Sbjct: 19950 caccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatg 19891 Query: 323 ctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaaga 382 | ||||| ||||| |||||||| |||||| | ||||||||||||| |||||||| || | Sbjct: 19890 ccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaa 19831 Query: 383 actttgctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||||| || ||| || ||||| ||||| ||| |||||||| Sbjct: 19830 actttgctcccctcaagcccctgtttgttgatctgcacatgggcag 19785 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 31604 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 31545 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| | |||||| |||||||||||||| Sbjct: 31544 tggggtgatgagggcctggatattgttgatgcaag 31510 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 20212 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 20153 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 20152 tggggtgatgaggacctggatatggttgatgcaag 20118 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 ||||||||||| |||||||| |||||||||||| | ||||| || ||||| Sbjct: 20050 gaggaaggtggttgggacctagaagatctggaacttccgcctgaagcaga 20001
>dbj|AK100286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G08, full insert sequence Length = 4221 Score = 139 bits (70), Expect = 9e-30 Identities = 142/166 (85%) Strand = Plus / Plus Query: 263 cacccggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatg 322 |||| |||||||||||||| | |||||||||||||| || ||||||||||||||||||| Sbjct: 2867 caccaggcatgcctgtcagcctgatttggactcagaaatcttctcttgctggggagcatg 2926 Query: 323 ctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaaga 382 | ||||| ||||| |||||||| |||||| | ||||||||||||| |||||||| || | Sbjct: 2927 ccgcagcagggaactttgacactgcaatgaggttgcttagccgccagttgggcataaaaa 2986 Query: 383 actttgctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||||| || ||| || ||||| ||||| ||| |||||||| Sbjct: 2987 actttgctcccctcaagcccctgtttgttgatctgcacatgggcag 3032 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 2605 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 2664 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 2665 tggggtgatgaggacctggatatggttgatgcaag 2699 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 ||||||||||| |||||||| |||||||||||| | ||||| || ||||| Sbjct: 2767 gaggaaggtggttgggacctagaagatctggaacttccgcctgaagcaga 2816
>dbj|AK058652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F03, full insert sequence Length = 1974 Score = 139 bits (70), Expect = 9e-30 Identities = 217/266 (81%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| |||||||| |||||||||||| | | ||| || ||||| || |||||| Sbjct: 693 gaggaaggtggttgggacctagaagatctggaacttctgcctgaagcagagaccccaaaa 752 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 | |||| || ||||| || | || || ||||| |||| |||||||||||||| Sbjct: 753 aatgctggcaatgcacgctcagcggtcttcgttgctcctccaccaggcatgcctgtcagc 812 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 | |||||||||||||| || |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 813 ctgatttggactcagaaatcttctcttgctggggagcatgcagcagcagggaactttgac 872 Query: 343 acagcaatgcgtctgcttagccgccaattgggcatcaagaactttgctcctctgaaggcc 402 || |||||| | ||||||| ||||| |||||||| || ||||||||||| || ||| || Sbjct: 873 actgcaatgaggttgcttagtcgccagttgggcataaaaaactttgctcccctcaagccc 932 Query: 403 ttgtttcttgatgcgcatatgggcag 428 ||||||||||| ||| |||||||| Sbjct: 933 ctgtttcttgatctgcacatgggcag 958 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 531 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 590 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| | |||||| |||||||||||||| Sbjct: 591 tggggtgatgagggcctggatattgttgatgcaag 625
>gb|AY104039.1| Zea mays PCO096800 mRNA sequence Length = 1207 Score = 139 bits (70), Expect = 9e-30 Identities = 109/122 (89%) Strand = Plus / Plus Query: 310 gctggggagcatgctgcagctgggaattttgacacagcaatgcgtctgcttagccgccaa 369 |||||||||||||| || || ||||| ||||| ||||||||| | |||||||||| ||| Sbjct: 6 gctggggagcatgcggctgcagggaactttgatacagcaatgaggttgcttagccgacaa 65 Query: 370 ttgggcatcaagaactttgctcctctgaaggccttgtttcttgatgcgcatatgggcagt 429 ||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct: 66 ttgggcatcaagaactttgctccgctgaagcccttgtttcttgatctgcatatgggcagt 125 Query: 430 ca 431 || Sbjct: 126 ca 127
>ref|XM_450153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1736 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 737 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 796 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 797 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 856 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 857 gctcctctcaagcccctatttctcgatctgcacatgggcag 897 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 470 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 529 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 530 tggggtgatgaggacctggatatggttgatgcaag 564 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 632 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 681
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 2075122 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 2075063 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 2075062 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 2075003 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 2075002 gctcctctcaagcccctatttctcgatctgcacatgggcag 2074962 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 2075389 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 2075330 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 2075329 tggggtgatgaggacctggatatggttgatgcaag 2075295 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 2075227 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 2075178
>dbj|AP005680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1352_A10 Length = 111655 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 110489 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 110430 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 110429 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 110370 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 110369 gctcctctcaagcccctatttctcgatctgcacatgggcag 110329 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 110756 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 110697 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 110696 tggggtgatgaggacctggatatggttgatgcaag 110662 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 110594 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 110545
>dbj|AP005576.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1610_C11 Length = 104553 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 539 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 480 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 479 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 420 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 419 gctcctctcaagcccctatttctcgatctgcacatgggcag 379 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 806 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 747 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 746 tggggtgatgaggacctggatatggttgatgcaag 712 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 644 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 595
>dbj|AK105672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A08, full insert sequence Length = 3045 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 1651 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 1710 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 1711 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 1770 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 1771 gctcctctcaagcccctatttctcgatctgcacatgggcag 1811 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 1384 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 1443 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 1444 tggggtgatgaggacctggatatggttgatgcaag 1478 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 1546 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 1595
>dbj|AK103786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145I16, full insert sequence Length = 4284 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 2955 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 3014 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 3015 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 3074 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 3075 gctcctctcaagcccctatttctcgatctgcacatgggcag 3115 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 2688 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 2747 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 2748 tggggtgatgaggacctggatatggttgatgcaag 2782 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 2850 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 2899
>dbj|AK058402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-B07, full insert sequence Length = 1736 Score = 137 bits (69), Expect = 4e-29 Identities = 138/161 (85%) Strand = Plus / Plus Query: 268 ggcatgcctgtcagtcaaatttggactcagaagtcatctcttgctggggagcatgctgca 327 |||||||||||||| || |||||||||||||| || ||||||||||||||||| || ||| Sbjct: 737 ggcatgcctgtcagccagatttggactcagaaatcttctcttgctggggagcacgcagca 796 Query: 328 gctgggaattttgacacagcaatgcgtctgcttagccgccaattgggcatcaagaacttt 387 || || || |||||||| |||||| | |||||||||| |||||||||||||| |||||| Sbjct: 797 gcaggaaactttgacactgcaatgagattgcttagccgtcaattgggcatcaaaaacttt 856 Query: 388 gctcctctgaaggccttgtttcttgatgcgcatatgggcag 428 |||||||| ||| || | ||||| ||| ||| |||||||| Sbjct: 857 gctcctctcaagcccctatttctcgatctgcacatgggcag 897 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| ||||||||||||| ||| || | |||||||| |||| | |||||||| ||| Sbjct: 470 ggactggatgctactgggaaggctgaacttgaggaagacgatgaagctgctggtgctgac 529 Query: 61 tggggtgatgaagacctggaaattgttgatgcaag 95 ||||||||||| |||||||| || ||||||||||| Sbjct: 530 tggggtgatgaggacctggatatggttgatgcaag 564 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcaga 212 |||||||||||||||||||| ||||| |||||| | ||||| || ||||| Sbjct: 632 gaggaaggtggctgggacctagaagacctggaacttccgcctgaagcaga 681
>gb|AF176226.1|AF176226 Triticum aestivum COP alpha homolog mRNA, partial cds Length = 1826 Score = 125 bits (63), Expect = 1e-25 Identities = 158/189 (83%), Gaps = 3/189 (1%) Strand = Plus / Plus Query: 163 gaggaaggtggctgggacctggaagatctggaattgccgccggaggcagatacaccaaaa 222 ||||||||||| ||||| || ||||||||||||||||| || |||| || |||||| Sbjct: 571 gaggaaggtggttgggatcttgaagatctggaattgcct---gaaccagagaccccaaaa 627 Query: 223 gctactggtgcggcccgctctgctttgtttgtggctcccacacccggcatgcctgtcagt 282 ||| |||| || |||||| || ||||||| ||||| ||||| || ||||||||||| Sbjct: 628 gctgctggaaatgctcgctctactgtgtttgttgctcctacaccaggaatgcctgtcagc 687 Query: 283 caaatttggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgac 342 ||||||||||||||||| || |||||||||||||||||||| ||||| || || |||||| Sbjct: 688 caaatttggactcagaaatcttctcttgctggggagcatgcagcagcaggcaactttgac 747 Query: 343 acagcaatg 351 || |||||| Sbjct: 748 actgcaatg 756 Score = 73.8 bits (37), Expect = 5e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 1 ggactagatgctactgggagggcagagcaggaggaagattatgatgatgctggtggtgat 60 ||||| |||||||||||||| ||||| ||||||||| |||| | |||||||| ||| Sbjct: 409 ggactggatgctactgggagagcagaagttgaggaagatgatgaagctgctggtgctgac 468 Query: 61 tggggtgatgaagacctggaaattgttgatgcaagtg 97 ||||||||||| ||| |||| ||||| |||||||||| Sbjct: 469 tggggtgatgaggacttggatattgtggatgcaagtg 505
>dbj|AK059218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C10, full insert sequence Length = 1032 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 305 ctcttgctggggagcatgctgcagctgggaattttgacacagcaatgcgtctgcttagcc 364 ||||||||||||||||||| ||||| ||||| |||||||| |||||| | ||||||||| Sbjct: 13 ctcttgctggggagcatgccgcagcagggaactttgacactgcaatgaggttgcttagcc 72 Query: 365 gccaattgggcatcaagaactttgctcctctgaaggccttgtttcttgatgcgcatatgg 424 |||| |||||||| || ||||||||||| || ||| || ||||| ||||| ||| |||| Sbjct: 73 gccagttgggcataaaaaactttgctcccctcaagcccctgtttgttgatctgcacatgg 132 Query: 425 gcag 428 |||| Sbjct: 133 gcag 136
>gb|AC020905.9| Homo sapiens chromosome 19 clone CTB-70G10, complete sequence Length = 141513 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 169 ggtggctgggacctggaagatctg 192 |||||||||||||||||||||||| Sbjct: 70403 ggtggctgggacctggaagatctg 70380
>ref|XM_690075.1| PREDICTED: Danio rerio similar to Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma (LOC566790), mRNA Length = 837 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 16 gggagggcagagcaggaggaaga 38 ||||||||||||||||||||||| Sbjct: 442 gggagggcagagcaggaggaaga 464
>ref|XM_393560.2| PREDICTED: Apis mellifera similar to CG3658-PA (LOC410073), mRNA Length = 1692 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 130 gatgaaagtgaaacaaatgaaga 152 ||||||||||||||||||||||| Sbjct: 418 gatgaaagtgaaacaaatgaaga 440
>emb|AJ580822.1|LCO580822 Lotus corniculatus var. japonicus gene for coatomer alpha subunit-like protein Length = 11115 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 289 tggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgacacagca 348 |||| ||||| |||||||||||| | || ||||| || ||||| ||||||||||| ||| Sbjct: 6376 tggattcagaggtcatctcttgcagctgatcatgcagctgctggcaattttgacactgca 6435 Query: 349 atg 351 ||| Sbjct: 6436 atg 6438 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 31 gaggaagattatgatgatgctggtggtgattggggtga 68 |||||||| ||||| | ||||| ||||||||||||||| Sbjct: 6124 gaggaagagtatgaggctgctgatggtgattggggtga 6161
>dbj|AP005665.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09E01, TM0258a, complete sequence Length = 6464 Score = 46.1 bits (23), Expect = 0.10 Identities = 53/63 (84%) Strand = Plus / Plus Query: 289 tggactcagaagtcatctcttgctggggagcatgctgcagctgggaattttgacacagca 348 |||| ||||| |||||||||||| | || ||||| || ||||| ||||||||||| ||| Sbjct: 1587 tggattcagaggtcatctcttgcagctgatcatgcagctgctggcaattttgacactgca 1646 Query: 349 atg 351 ||| Sbjct: 1647 atg 1649 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 31 gaggaagattatgatgatgctggtggtgattggggtga 68 |||||||| ||||| | ||||| ||||||||||||||| Sbjct: 1335 gaggaagagtatgaggctgctgatggtgattggggtga 1372
>gb|AY724475.1| Rattus norvegicus clone UI-R-FJ0-cpu-e-04-0-UI unknown mRNA Length = 1979 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgattggggtgatgaaga 74 ||||||||| |||||||||| | ||||||||||| Sbjct: 1411 atgatgatggtggtggtgatggtggtgatgaaga 1444
>ref|XM_779346.1| PREDICTED: Strongylocentrotus purpuratus similar to RIO kinase 2 (LOC579218), mRNA Length = 1966 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 138 tgaaacaaatgaagaggatggggaagagga 167 ||||||| |||||||||||| ||||||||| Sbjct: 924 tgaaacagatgaagaggatgaggaagagga 953
>emb|AL646056.18| Mouse DNA sequence from clone RP23-412O18 on chromosome 11, complete sequence Length = 111791 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 gaagaggatggggaagaggaag 169 |||||||||||||||||||||| Sbjct: 80924 gaagaggatggggaagaggaag 80945
>emb|AL606902.26| Mouse DNA sequence from clone RP23-167A12 on chromosome 4, complete sequence Length = 100421 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagagga 167 |||||||||||||||||||||| Sbjct: 18419 atgaagaggatggggaagagga 18398
>dbj|AP000886.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1750A9 Length = 220495 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 152 aggatggggaagaggaaggtggctgg 177 |||||| ||||||||||||||||||| Sbjct: 151594 aggatgaggaagaggaaggtggctgg 151619
>ref|XM_640856.1| Dictyostelium discoideum hypothetical protein (DDB0190242), partial mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 39 ttatgatgatgctggtggtgattggggtgatga 71 ||||||||||| |||||||||| | |||||||| Sbjct: 218 ttatgatgatgatggtggtgatggtggtgatga 186
>gb|AC120159.9| Mus musculus chromosome 19, clone RP24-408B13, complete sequence Length = 178918 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aagtgaaacaaatgaagagga 155 ||||||||||||||||||||| Sbjct: 75757 aagtgaaacaaatgaagagga 75737
>gb|AC092574.2| Homo sapiens BAC clone RP11-2H3 from 4, complete sequence Length = 144117 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 tggggaagaggaaggtggctg 176 ||||||||||||||||||||| Sbjct: 139736 tggggaagaggaaggtggctg 139716
>gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, complete sequence Length = 230426 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 ggtggctgggacctggaagat 189 ||||||||||||||||||||| Sbjct: 137397 ggtggctgggacctggaagat 137377
>gb|AC008275.3| Homo sapiens BAC clone RP11-294I11 from 2, complete sequence Length = 166504 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 gtgaaacaaatgaagaggatg 157 ||||||||||||||||||||| Sbjct: 48204 gtgaaacaaatgaagaggatg 48184
>gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, complete sequence Length = 159856 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 ggtggctgggacctggaagat 189 ||||||||||||||||||||| Sbjct: 21626 ggtggctgggacctggaagat 21646
>emb|AL831740.9| Mouse DNA sequence from clone RP23-395P16 on chromosome 4, complete sequence Length = 166965 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 aggaggaagattatgatgatg 49 ||||||||||||||||||||| Sbjct: 86920 aggaggaagattatgatgatg 86940
>emb|AL772220.7| Mouse DNA sequence from clone RP23-409N18 on chromosome 4, complete sequence Length = 176159 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 gagggcagagcaggaggaaga 38 ||||||||||||||||||||| Sbjct: 77492 gagggcagagcaggaggaaga 77472
>emb|AL627226.16| Mouse DNA sequence from clone RP23-139P4 on chromosome 4, complete sequence Length = 90450 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 ctggggagcatgctgcagctg 331 ||||||||||||||||||||| Sbjct: 22379 ctggggagcatgctgcagctg 22359
>gb|AC116696.20| Mus musculus chromosome 3, clone RP24-425N23, complete sequence Length = 168053 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgaaacaaatgaagaggatg 157 |||||||||||||||||||| Sbjct: 159413 tgaaacaaatgaagaggatg 159394
>gb|AY609282.1| Chlorospingus ophthalmicus voucher MZFC 11585 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 675 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 539 gagcaggaggaagattatga 520
>gb|AY609281.1| Chlorospingus ophthalmicus voucher MZFC 12490 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 670 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 534 gagcaggaggaagattatga 515
>gb|AY609280.1| Chlorospingus ophthalmicus voucher IECO 065 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 613 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 535 gagcaggaggaagattatga 516
>gb|AY609279.1| Chlorospingus ophthalmicus voucher MZFC 10981 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 674 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 538 gagcaggaggaagattatga 519
>gb|AY609278.1| Chlorospingus ophthalmicus voucher MZFC 11297 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 665 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 529 gagcaggaggaagattatga 510
>gb|AY609277.1| Chlorospingus ophthalmicus voucher MZFC 10398 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 675 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 539 gagcaggaggaagattatga 520
>gb|AY609276.1| Chlorospingus ophthalmicus voucher MZFC BMM 085 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 674 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 538 gagcaggaggaagattatga 519
>gb|AY609275.1| Chlorospingus ophthalmicus voucher MZFC 9715 cytochrome oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; ATPase8 gene, complete cds; and ATPase6 gene, partial cds; mitochondrial Length = 645 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 509 gagcaggaggaagattatga 490
>ref|NM_001031221.1| Gallus gallus coiled-coil domain containing 6 (CCDC6), mRNA Length = 4004 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agggcagagcaggaggaaga 38 |||||||||||||||||||| Sbjct: 385 agggcagagcaggaggaaga 404
>gb|BC077351.1| Xenopus laevis zinc finger CCCH type domain containing 7, mRNA (cDNA clone MGC:81244 IMAGE:6630953), complete cds Length = 5205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 tgtgatagaaaatggagatg 118 |||||||||||||||||||| Sbjct: 902 tgtgatagaaaatggagatg 883
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ccgccaattgggcatcaaga 382 |||||||||||||||||||| Sbjct: 2932519 ccgccaattgggcatcaaga 2932500
>gb|AC147004.2| Homo sapiens chromosome 8, clone RP13-895A16, complete sequence Length = 109297 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 80817 atgatgatgctggtggtgat 80836
>gb|AF382959.1| Zeledonia coronata ATP synthase 8 and ATP synthase 6 genes, complete cds; mitochondrial Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AC185523.2| Pan troglodytes chromosome X clone PTB-124O20 map human ortholog p11.3, complete sequence Length = 209530 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgatgaagacctggaaattg 85 |||||||||||||||||||| Sbjct: 40390 tgatgaagacctggaaattg 40371
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gaggatggggaagaggaagg 170 |||||||||||||||||||| Sbjct: 202020 gaggatggggaagaggaagg 202039
>gb|AC109308.8| Mus musculus chromosome 3, clone RP24-459K16, complete sequence Length = 133381 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tgaaacaaatgaagaggatg 157 |||||||||||||||||||| Sbjct: 10378 tgaaacaaatgaagaggatg 10359
>ref|XR_002276.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC668972), mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 433 atgaagaggatgaggaagaggaag 456
>ref|XR_004709.1| PREDICTED: Mus musculus similar to High mobility group protein 1 (HMG-1) (High mobility group protein B1) (Amphoterin) (Heparin-binding protein p30) (LOC674960), mRNA Length = 846 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 433 atgaagaggatgaggaagaggaag 456
>gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome 1, complete sequence Length = 184034 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caaatgaagaggatggggaa 162 |||||||||||||||||||| Sbjct: 180682 caaatgaagaggatggggaa 180701
>gb|AC124697.3| Mus musculus BAC clone RP24-177N20 from chromosome 1, complete sequence Length = 164612 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 caaatgaagaggatggggaa 162 |||||||||||||||||||| Sbjct: 26538 caaatgaagaggatggggaa 26557
>gb|AC132569.3| Mus musculus BAC clone RP24-486E21 from chromosome 8, complete sequence Length = 172340 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 aagattatgatgatgctggtggtg 58 ||||||||||||||| |||||||| Sbjct: 131393 aagattatgatgatgatggtggtg 131416
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gaggatggggaagaggaagg 170 |||||||||||||||||||| Sbjct: 21263 gaggatggggaagaggaagg 21244
>gb|AC126688.4| Mus musculus BAC clone RP23-152P20 from chromosome 7, complete sequence Length = 205673 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 139516 atgaagaggatgaggaagaggaag 139539
>gb|AC130467.2| Homo sapiens chromosome 16 clone CTD-2015G9, complete sequence Length = 117601 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 18619 atgatgatgctggtggtgat 18600
>emb|Z74042.1|CET11F9 Caenorhabditis elegans Cosmid T11F9, complete sequence Length = 37714 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 37343 atgatgatgctggtggtgat 37362
>gb|AC124380.4| Mus musculus BAC clone RP24-404N12 from chromosome 8, complete sequence Length = 149620 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 aagattatgatgatgctggtggtg 58 ||||||||||||||| |||||||| Sbjct: 12988 aagattatgatgatgatggtggtg 12965
>gb|AC122237.4| Mus musculus BAC clone RP23-143A15 from 8, complete sequence Length = 183867 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 aagattatgatgatgctggtggtg 58 ||||||||||||||| |||||||| Sbjct: 159193 aagattatgatgatgatggtggtg 159170
>gb|AC121929.2| Mus musculus BAC clone RP24-204J10 from 5, complete sequence Length = 143840 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 100140 atgaagaggatgaggaagaggaag 100163
>gb|AC099609.8| Mus musculus chromosome 7, clone RP23-376D24, complete sequence Length = 226284 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 185382 atgaagaggatgaggaagaggaag 185359
>gb|AC138133.26| Medicago truncatula clone mth2-9o2, complete sequence Length = 149166 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 aaatgaagaggatggggaagaggaaggt 171 |||||||||||||| ||| ||||||||| Sbjct: 76119 aaatgaagaggatgaggatgaggaaggt 76146
>gb|AF468608.1| Amphispiza belli ATPase subunit 8 and ATPase subunit 6 genes, complete cds; and cytochrome oxidase subunit III gene, partial cds; mitochondrial genes for mitochondrial products Length = 1670 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 435 gagcaggaggaagattatga 416
>gb|AC126790.38| Medicago truncatula clone mth2-10d14, complete sequence Length = 127447 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 144 aaatgaagaggatggggaagaggaaggt 171 |||||||||||||| ||| ||||||||| Sbjct: 26473 aaatgaagaggatgaggatgaggaaggt 26500
>ref|NM_024133.2| Rattus norvegicus huntingtin-associated protein 1 (Hap1), transcript variant 1, mRNA Length = 3633 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 689 atgaagaggatgaggaagaggaag 712
>ref|NM_177982.1| Rattus norvegicus huntingtin-associated protein 1 (Hap1), transcript variant 2, mRNA Length = 3126 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 689 atgaagaggatgaggaagaggaag 712
>emb|Z98884.11|HS467L1 Human DNA sequence from clone RP3-467L1 on chromosome 1p36.21-36.33 Contains the 3' end of the CAMTA1 gene for calmodulin binding transcription activator 1, the VAMP3 gene for vesicle-associated membrane protein 3 (cellubrevin), the PER3 gene for period homolog 3 (Drosophila), a novel gene, the UTS2 gene for urotensin 2 and a CpG island, complete sequence Length = 162727 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 agggcagagcaggaggaaga 38 |||||||||||||||||||| Sbjct: 9664 agggcagagcaggaggaaga 9645
>emb|AL591491.5| Human DNA sequence from clone RP11-435K1 on chromosome Xp15.3-15.5 Contains the 5' end of a novel gene (FLJ14103 FLJ37558) and the 5' end of a novel gene, complete sequence Length = 121720 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgatgaagacctggaaattg 85 |||||||||||||||||||| Sbjct: 9240 tgatgaagacctggaaattg 9221
>emb|AL356214.20| Human DNA sequence from clone RP11-30E16 on chromosome 10 Contains the C10orf3 gene for chromosome 10 open reading frame 3, the RBP4 gene for retinol binding protein 4 (plasma), the 5' end of the PDE6C gene for phosphodiesterase 6C (cGMP-specific, cone, alpha prime), the GPR120 gene for G protein-coupled receptor 120 and three CpG islands, complete sequence Length = 163964 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ggggaagaggaaggtggctg 176 |||||||||||||||||||| Sbjct: 118531 ggggaagaggaaggtggctg 118550
>emb|AL137022.8| Human DNA sequence from clone RP11-344A7 on chromosome 9p21.2-22.3 Contains the 5' end of a novel gene, a histone H3 pseudogene, and a CpG island, complete sequence Length = 169854 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 33793 atgatgatgctggtggtgat 33774
>gb|AC095532.8| Rattus norvegicus 18 BAC CH230-8E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 227576 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 43836 atgaagaggatgaggaagaggaag 43813
>gb|AC073493.27| Homo sapiens Xp BAC RP11-631N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 211422 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaagaggatggggaagagga 167 |||||||||||||||||||| Sbjct: 38182 gaagaggatggggaagagga 38201
>emb|BX842594.1| Neurospora crassa DNA linkage group II BAC clone B18P7 Length = 95637 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 28530 atgatgatgctggtggtgat 28511
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagag 165 |||||||||||||||||||| Sbjct: 129915 atgaagaggatggggaagag 129896
>emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chromosome 11 Contains the 5' end of the Sparc gene for secreted acidic cysteine rich glycoprotein, the Atox1 gene for ATX1 (antioxidant protein 1) homolog 1 (yeast), an upregulated during skeletal muscle growth 5 (Usmg5) pseudogene, the gene for Ras-GTPase-activating protein SH3-domain binding protein (G3bp-pending) (C87777), a novel gene, the Glra1 gene for glycine receptor, alpha 1 subunit, a novel gene, a ubiquitously expressed transcript (Uxt) pseudogene and one CpG island, complete sequence Length = 204037 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 tgatgatgctggtggtgattggggtgat 69 |||||||| |||||||||||| |||||| Sbjct: 122389 tgatgatggtggtggtgattgtggtgat 122362
>emb|AL356834.1|NCB11B22 Neurospora crassa DNA linkage group II BAC clone B11B22 Length = 73803 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 15510 atgatgatgctggtggtgat 15529
>emb|AJ851457.1| Gallus gallus mRNA for hypothetical protein, clone 3i14 Length = 4004 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agggcagagcaggaggaaga 38 |||||||||||||||||||| Sbjct: 385 agggcagagcaggaggaaga 404
>gb|AC083984.7| Homo sapiens chromosome 11, clone RP11-401C19, complete sequence Length = 117149 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gctactgggagggcagagca 29 |||||||||||||||||||| Sbjct: 28613 gctactgggagggcagagca 28594
>emb|CR937045.1|PT025P03 Pan troglodytes chromosome 11 BAC PTB-025P03, complete sequence Length = 173795 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 66843 atgatgatgctggtggtgat 66824
>emb|AL596204.8| Mouse DNA sequence from clone RP23-180B18 on chromosome 11 Contains the Flcn gene for folliculin, the gene for a novel Phospholipase D Active site motif-containing protein, two novel genes, the gene for Rho interacting protein 3 (Rhoip3), the gene (possible pseudogene) for a novel protein similar to olfactory receptor proteins and two CpG islands, complete sequence Length = 205606 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 gaggatggggaagaggaagg 170 |||||||||||||||||||| Sbjct: 119658 gaggatggggaagaggaagg 119639
>gb|AC008035.12| Homo sapiens 12 BAC RP11-446N19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 104000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 101810 atgatgatgctggtggtgat 101829
>gb|AF447332.1| Geospiza fortis cytochrome c oxidase subunit II gene, partial cds; tRNA-Lys gene, complete sequence; and ATP synthase 8 and ATP synthase 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 998 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 560 gagcaggaggaagattatga 541
>emb|BX322655.10| Zebrafish DNA sequence from clone DKEYP-53E12 in linkage group 8, complete sequence Length = 184723 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gaaagtgaaacaaatgaaga 152 |||||||||||||||||||| Sbjct: 162555 gaaagtgaaacaaatgaaga 162536
>gb|AC011594.8| Homo sapiens 12p12-27.2-31.7 BAC RP11-18J10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105207 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 aaagtgaaacaaatgaagag 153 |||||||||||||||||||| Sbjct: 64041 aaagtgaaacaaatgaagag 64022
>gb|AC097658.2| Homo sapiens BAC clone RP11-364L4 from 4, complete sequence Length = 165247 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gatgatgctggtggtgattg 62 |||||||||||||||||||| Sbjct: 140996 gatgatgctggtggtgattg 141015
>dbj|AK157061.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830116K19 product:unclassifiable, full insert sequence Length = 1539 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaagaggatggggaagagga 167 |||||||||||||||||||| Sbjct: 1457 gaagaggatggggaagagga 1476
>ref|XM_627713.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_3730), partial mRNA Length = 6810 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagag 165 |||||||||||||||||||| Sbjct: 865 atgaagaggatggggaagag 846
>gb|AY262165.1| Pichia pastoris protein kinase C (PKC1) gene, complete cds Length = 3348 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 2107 atgatgatgctggtggtgat 2088
>gb|AC142398.2| Homo sapiens chromosome 8, clone XXfos-87101G1, complete sequence Length = 43668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 21040 atgatgatgctggtggtgat 21059
>ref|NM_073515.3| Caenorhabditis elegans T11F9.12 (T11F9.12) mRNA, complete cds Length = 2353 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 765 atgatgatgctggtggtgat 746
>dbj|AK033130.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030444B03 product:retinoblastoma binding protein 2, full insert sequence Length = 2264 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gaggatggggaagaggaagg 170 |||||||||||||||||||| Sbjct: 2085 gaggatggggaagaggaagg 2104
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atgaaagtgaaacaaatgaa 150 |||||||||||||||||||| Sbjct: 37756422 atgaaagtgaaacaaatgaa 37756441
>gb|AC084020.17|AC084020 Mus musculus 11 BAC RP23-301I12 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 147670 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 gaggatggggaagaggaagg 170 |||||||||||||||||||| Sbjct: 57674 gaggatggggaagaggaagg 57693
>gb|DQ021880.1| Homo sapiens GRB2-associated binding protein 1 (GAB1) gene, complete cds Length = 135764 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 gatgatgctggtggtgattg 62 |||||||||||||||||||| Sbjct: 32052 gatgatgctggtggtgattg 32071
>gb|AC159040.2| Pan troglodytes BAC clone CH251-149A3 from chromosome unknown, complete sequence Length = 174983 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ggcagagcaggaggaagatt 40 |||||||||||||||||||| Sbjct: 35828 ggcagagcaggaggaagatt 35847
>dbj|AB162351.1| Drosophila sechellia genes, CG11099 to CG8914 region, complete cds Length = 63744 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 37 gattatgatgatgctggtggtgat 60 ||||||||||||| |||||||||| Sbjct: 586 gattatgatgatggtggtggtgat 563
>gb|AC018801.4|AC018801 Homo sapiens BAC clone RP11-279O19 from 8, complete sequence Length = 177130 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 aagtgctgtgatagaaaatg 112 |||||||||||||||||||| Sbjct: 25342 aagtgctgtgatagaaaatg 25323
>ref|XM_217657.3| PREDICTED: Rattus norvegicus similar to mKIAA0534 protein (LOC307992), mRNA Length = 6464 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ttgttgatgcaagtgctgtg 102 |||||||||||||||||||| Sbjct: 5051 ttgttgatgcaagtgctgtg 5032
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atgaaagtgaaacaaatgaa 150 |||||||||||||||||||| Sbjct: 84723 atgaaagtgaaacaaatgaa 84742
>gb|AC136489.3| Homo sapiens chromosome X clone RP13-749I18 map Xp11.3 complete sequence Length = 164468 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 tgatgaagacctggaaattg 85 |||||||||||||||||||| Sbjct: 85885 tgatgaagacctggaaattg 85866
>emb|BX548065.6| Mouse DNA sequence from clone RP23-163B21 on chromosome X, complete sequence Length = 225082 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 92935 atgaagaggatgaggaagaggaag 92912
>dbj|AP006749.3| Homo sapiens genomic DNA, chromosome 8q24.3, clone: KB1528A10, complete sequence Length = 34971 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 8870 atgatgatgctggtggtgat 8851
>dbj|AB124586.1| Pan troglodytes RBP4 gene for retinol binding protein4, complete cds Length = 173042 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 ggggaagaggaaggtggctg 176 |||||||||||||||||||| Sbjct: 111517 ggggaagaggaaggtggctg 111498
>emb|AL953846.6| Zebrafish DNA sequence from clone CH211-244D10, complete sequence Length = 153939 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atgaaagtgaaacaaatgaa 150 |||||||||||||||||||| Sbjct: 126246 atgaaagtgaaacaaatgaa 126227
>gb|AF132433.1|AF132433 Tiaris bicolor isolate SV-TBI2164 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AF132432.1|AF132432 Tiaris bicolor isolate SV-TBI2132 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AF132431.1|AF132431 Tiaris bicolor isolate SL-TBI4 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AF132430.1|AF132430 Tiaris bicolor isolate SL-TBI3 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AF132429.1|AF132429 Tiaris bicolor isolate BA-TBI7 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AF132428.1|AF132428 Tiaris bicolor isolate BA-TBI6 ATPase subunit 8 and ATPase subunit 6 genes, complete cds; mitochondrial genes for mitochondrial products Length = 842 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gagcaggaggaagattatga 44 |||||||||||||||||||| Sbjct: 404 gagcaggaggaagattatga 385
>gb|AC002460.1|AC002460 Human BAC clone CTB-191D16, complete sequence Length = 174952 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agattatgatgatgctggtg 55 |||||||||||||||||||| Sbjct: 47087 agattatgatgatgctggtg 47106
>emb|CR932979.5| Zebrafish DNA sequence from clone CH211-80M8 in linkage group 10, complete sequence Length = 177139 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 atgaaagtgaaacaaatgaa 150 |||||||||||||||||||| Sbjct: 35251 atgaaagtgaaacaaatgaa 35232
>emb|AL162151.5|CNS01RHO Human chromosome 14 DNA sequence BAC C-3104H21 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 231893 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ggcagagcaggaggaagatt 40 |||||||||||||||||||| Sbjct: 194490 ggcagagcaggaggaagatt 194471
>dbj|AP006477.2| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1335O1, complete sequence Length = 77332 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 gctactgggagggcagagca 29 |||||||||||||||||||| Sbjct: 54201 gctactgggagggcagagca 54220
>gb|AC133519.3| Mus musculus BAC clone RP23-178N8 from chromosome 5, complete sequence Length = 219269 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 52366 atgaagaggatgaggaagaggaag 52389
>dbj|AP001271.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-826F13, complete sequence Length = 210402 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 aaatgaagaggatggggaag 163 |||||||||||||||||||| Sbjct: 119129 aaatgaagaggatggggaag 119110
>dbj|AP003466.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1047C11 Length = 154371 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 aagtgctgtgatagaaaatg 112 |||||||||||||||||||| Sbjct: 29206 aagtgctgtgatagaaaatg 29225
>gb|AC130926.4| Rattus norvegicus BAC CH230-39O11 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217219 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 atgatgatgctggtggtgat 60 |||||||||||||||||||| Sbjct: 36293 atgatgatgctggtggtgat 36274
>gb|U38373.1|RNU38373 Rattus norvegicus huntingtin associated protein (rHAP1-A) mRNA, complete cds Length = 3708 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 704 atgaagaggatgaggaagaggaag 727
>gb|U38370.1|RNU38370 Rattus norvegicus huntingtin associated protein (rHAP1-B) mRNA, complete cds, alternatively spliced form Length = 3201 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||||| ||||||||||| Sbjct: 704 atgaagaggatgaggaagaggaag 727
>emb|AL627409.9| Mouse DNA sequence from clone RP23-430L23 on chromosome X, complete sequence Length = 189295 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gaagaggatggggaagagga 167 |||||||||||||||||||| Sbjct: 62662 gaagaggatggggaagagga 62681
>emb|AL845432.7| Mouse DNA sequence from clone RP23-332H19 on chromosome 2, complete sequence Length = 195835 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tgggaattttgacacagcaa 349 |||||||||||||||||||| Sbjct: 32579 tgggaattttgacacagcaa 32560
>emb|AL627185.10| Mouse DNA sequence from clone RP23-332E2 on chromosome 4, complete sequence Length = 120180 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 146 atgaagaggatggggaagaggaag 169 |||||||||| ||||||||||||| Sbjct: 109627 atgaagaggagggggaagaggaag 109650
>emb|AL627076.14| Mouse DNA sequence from clone RP23-402I22 on chromosome 4, complete sequence Length = 163353 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 42 tgatgatgctggtggtgattggggtgat 69 ||||||||||||||||||| | |||||| Sbjct: 37535 tgatgatgctggtggtgatggtggtgat 37508
>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0008G24 Length = 152736 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atgaaagtgaaacaaatgaa 150 |||||||||||||||||||| Sbjct: 15670 atgaaagtgaaacaaatgaa 15689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,436,417 Number of Sequences: 3902068 Number of extensions: 5436417 Number of successful extensions: 130465 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130026 Number of HSP's gapped (non-prelim): 438 length of query: 479 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 457 effective length of database: 17,147,199,772 effective search space: 7836270295804 effective search space used: 7836270295804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
