ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet02g10 |
|---|---|
| Clone Library Name | barley_pub |
>NLTP2_ORYSA (Q42978) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 118 Score = 36.6 bits (83), Expect = 0.028 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACLIL 314 A SC + ++ +PCLS+ GGS P+A CC RSL++ +T+ T+C CL Sbjct: 27 AISC-GQVNSAVSPCLSYAR-----GGSGPSAACCSGVRSLNSAASTTADRRTACNCLKN 80 Query: 315 TGNVPLGLPINRTLAVTLPKAC 380 GL N A ++P C Sbjct: 81 VAGSISGL--NAGNAASIPSKC 100
>NLTP2_SORBI (Q43194) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 122 Score = 35.0 bits (79), Expect = 0.082 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 7/88 (7%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACLIL 314 A +C + ++ PCLS+ G GS P+A CC RSL++ T+ +C CL Sbjct: 30 AVTC-GQVSSAIGPCLSYA----RGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKN 84 Query: 315 TGNVPLGLPINRTLAVTLPKACNSMSVP 398 GL + + A ++P C +S+P Sbjct: 85 AARGIRGLNVGK--AASIPSKC-GVSIP 109
>NLTP1_ORYSA (P23096) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| (PAPI) Length = 116 Score = 35.0 bits (79), Expect = 0.082 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Frame = +3 Query: 153 VATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACLI 311 VA +C + ++ PCL++ GG+ P+A CC RSL A +T+ T+C CL Sbjct: 24 VAITC-GQVNSAVGPCLTYAR-----GGAGPSAACCSGVRSLFAAASTTADRRTACNCL- 76 Query: 312 LTGNVPLGLP-INRTLAVTLPKACNSMSVP 398 N G+ +N A ++P C +SVP Sbjct: 77 --KNAARGIKGLNAGNAASIPSKC-GVSVP 103
>NLTP_MAIZE (P19656) Nonspecific lipid-transfer protein precursor (LTP)| (Phospholipid transfer protein) (PLTP) (Allergen Zea m 14) Length = 120 Score = 34.3 bits (77), Expect = 0.14 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACLIL 314 A SC + ++ PC+S+ G GS P+A CC RSL+ T+ +C CL Sbjct: 28 AISC-GQVASAIAPCISYA----RGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCL-- 80 Query: 315 TGNVPLGLP-INRTLAVTLPKACNSMSVP 398 N G+ +N A ++P C +S+P Sbjct: 81 -KNAAAGVSGLNAGNAASIPSKC-GVSIP 107
>NLTP3_PRUDU (Q43019) Nonspecific lipid-transfer protein 3 precursor (LTP 3)| Length = 123 Score = 33.9 bits (76), Expect = 0.18 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 10/85 (11%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTSTS----CACLIL 314 A SC ++ + TPC+++V NGG +P+ CC RSL ++ T+ C CL Sbjct: 30 AVSC-GQVVNNLTPCINYV---ANGGALNPS--CCTGVRSLYSLAQTTADRQSICNCLKQ 83 Query: 315 TGNVPLGLP---INRTLAVTLPKAC 380 N G+P N LA LP C Sbjct: 84 AVN---GIPYTNANAGLAAGLPGKC 105
>NLTPA_RICCO (P10973) Nonspecific lipid-transfer protein A (NS-LTP A)| (Phospholipid transfer protein) (PLTP) Length = 92 Score = 33.9 bits (76), Expect = 0.18 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Frame = +3 Query: 183 TSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTSTS--CACLILTGNVPLGLPIN 347 +S C+ F+T GG +SP+A CC ++L + TS AC + I Sbjct: 8 SSLASCIPFLT----GGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIK 63 Query: 348 RTLAVTLPKACN-SMSVPLQCKDTSAQ 425 + A +LPK C +++P+ K T+ Q Sbjct: 64 QDAASSLPKKCGVDINIPIS-KTTNCQ 89
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 32.7 bits (73), Expect = 0.41 Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 17/90 (18%) Frame = +2 Query: 164 VHGIAHHQLHAVPQLRHQQHQRRXXXXXXXXXXXXXXXX-------------DHEHQLRL 304 + G H Q+H Q HQQHQ + H HQ + Sbjct: 1908 LQGQRHGQVHGNGQQLHQQHQHQQQQPQQAQQTQQQRQQVHPAPQLPQAQPPQHSHQAQA 1967 Query: 305 PHPDRQRAARP---ADQPDPRRHA-AQGLQ 382 HP Q+A P A QP P + A AQ +Q Sbjct: 1968 QHPQTQQAQAPQAQAQQPQPPQQAQAQQVQ 1997
>NLTP_DAUCA (P27631) Nonspecific lipid-transfer protein precursor (LTP)| (Extracellular protein 2) Length = 120 Score = 32.3 bits (72), Expect = 0.53 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 4/82 (4%) Frame = +3 Query: 186 SFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTS----TSCACLILTGNVPLGLPINRT 353 + PCL ++ + N + R L+ T+ T+C CL T N GL +N Sbjct: 36 ALAPCLGYLRSQVNVPVPLTCCNVVRGLNNAARTTLDKRTACGCLKQTANAVTGLNLN-- 93 Query: 354 LAVTLPKACNSMSVPLQCKDTS 419 A LP C +++P + T+ Sbjct: 94 AAAGLPARC-GVNIPYKISPTT 114
>NLTP_CICAR (O23758) Nonspecific lipid-transfer protein precursor (LTP)| Length = 116 Score = 32.3 bits (72), Expect = 0.53 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 5/71 (7%) Frame = +3 Query: 183 TSFTPCLSFVTNSTNGGGSSPTADCCRSL-----SAVVTTSTSCACLILTGNVPLGLPIN 347 T+ PCL ++ GG P+A CC + +AV T AC L +N Sbjct: 32 TALAPCLGYLQ-----GGPGPSAQCCGGVRNLNSAAVTTPDRQAACNCLKSAAGSISRLN 86 Query: 348 RTLAVTLPKAC 380 A LP C Sbjct: 87 ANNAAALPGKC 97
>NLTP5_ORYSA (O65091) Nonspecific lipid-transfer protein 5 precursor (LTP 5)| Length = 117 Score = 32.3 bits (72), Expect = 0.53 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 7/51 (13%) Frame = +3 Query: 177 LITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACL 308 +++++ PC+ + +G G +PT CC R+L++ T+ T+CACL Sbjct: 31 VVSTWAPCIMYA----DGEGVAPTGGCCDGVRTLNSAAATTADRQTTCACL 77
>AMP1_ALLCE (Q41258) Antimicrobial protein Ace-AMP1 precursor| Length = 132 Score = 31.2 bits (69), Expect = 1.2 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 6/74 (8%) Frame = +3 Query: 192 TPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTST------SCACLILTGNVPLGLPINRT 353 TPC+++ G G +P A CCR+L+ + +T +C CL+ N GL N Sbjct: 39 TPCVAY------GLGRAPIAPCCRALNDLRFVNTRNLRRAACRCLVGVVNRNPGLRRNPR 92 Query: 354 LAVTLPKACNSMSV 395 +P+ C + V Sbjct: 93 FQ-NIPRDCRNTFV 105
>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 522 Score = 31.2 bits (69), Expect = 1.2 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 16/89 (17%) Frame = +3 Query: 153 VATSCTASLITSFTPCLSFVTNS-----TNG---------GGSSPTADCCRSLSAVVTTS 290 +AT+ T+S T + C T T G G+S T + +A TTS Sbjct: 225 IATAPTSSATTGLSLCTPVTTAGAPTAGTQGFSLKAPGAASGTSTTTSTAATATATTTTS 284 Query: 291 TSCA--CLILTGNVPLGLPINRTLAVTLP 371 +S L L P G+P N AVT P Sbjct: 285 SSTTGFALNLKPLAPAGIPSNTAAAVTAP 313
>M6_LILHE (Q40189) M6 protein (LHM6) (Fragment)| Length = 78 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +3 Query: 240 SPTADCCRSLSAVVTTSTSCACLILTGNVPLGLPIN 347 +P+A+CC SLSAV T CL T N+ LP N Sbjct: 10 TPSAECCSSLSAVNT-----GCLCETINILSSLPAN 40
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 30.8 bits (68), Expect = 1.6 Identities = 33/156 (21%), Positives = 51/156 (32%), Gaps = 15/156 (9%) Frame = +3 Query: 21 ACSCEVVTSGREVATEIAMDLRXXXXXXXXXXXXXXXXXXXGQGVATSCTASLITSFTPC 200 + S TSG G G + S + T+ P Sbjct: 78 SASTASTTSGPGTTPSPVPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAP- 136 Query: 201 LSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPLGLPINRTLAV------ 362 T++T+G G++P+ S ++ TTST+ G P +P T V Sbjct: 137 ---TTSTTSGPGTTPSPVPTTSTTSAPTTSTTSG----PGTTPSPVPTTSTTPVSKTSTS 189 Query: 363 --TLPKACNSMSVPLQCKDTSA-------QLPAPGP 443 ++ K +S V C A P+PGP Sbjct: 190 HLSVSKTTHSQPVTSDCHPLCAWTKWFDVDFPSPGP 225
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/146 (16%), Positives = 45/146 (30%) Frame = +3 Query: 6 PSRSRACSCEVVTSGREVATEIAMDLRXXXXXXXXXXXXXXXXXXXGQGVATSCTASLIT 185 P+ + S T+ V T + A + TA+ T Sbjct: 157 PTTTTPTSTTTTTATTTVPTTASTTTDTTTAATTTAATTTAATTTAATTTAATTTAATTT 216 Query: 186 SFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPLGLPINRTLAVT 365 + T + +++T ++ + +A TT+ + TG+ G + + Sbjct: 217 AATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTTGASTS 276 Query: 366 LPKACNSMSVPLQCKDTSAQLPAPGP 443 P A + S TSA P Sbjct: 277 TPSASTATSATPTSTSTSAAATTSTP 302
>NLTP2_LYCES (P27056) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 114 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Frame = +3 Query: 156 ATSCTASLITS-FTPCLSFVTNSTNGGGSSPTADCCRS----LSAVVTTS---TSCACLI 311 A + T +T+ PCL ++ G P CC L + TT+ T+C CL Sbjct: 22 AEALTCGQVTAGLAPCLPYLQ------GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLK 75 Query: 312 LTGNVPLGLPINRTLAVTLPKAC 380 N G+ +N+ A +P C Sbjct: 76 SAANAIKGIDLNK--AAGIPSVC 96
>NLTP3_BRANA (Q42616) Nonspecific lipid-transfer protein 3 precursor (LTP 3)| Length = 117 Score = 30.4 bits (67), Expect = 2.0 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 7/95 (7%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC--RSLSAVVTTST----SCACLILT 317 A SC ++ + C+ ++T + G PTA C SL+ + T+ +C CL+ Sbjct: 26 ALSC-GTVSGNLAACIGYLTQN----GPVPTACCSGVTSLNNMARTTPDRQQACRCLVGA 80 Query: 318 GNVPLGLP-INRTLAVTLPKACNSMSVPLQCKDTS 419 N LP IN A LPKAC +++P + T+ Sbjct: 81 ANA---LPTINVARAAGLPKAC-GVNIPYKISKTT 111
>NLTP1_SORBI (Q43193) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| Length = 118 Score = 30.4 bits (67), Expect = 2.0 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCC---RSLSAVVTTS----TSCACLIL 314 A SC + ++ CLS+ G G +P+A CC RSL++ T+ +C CL Sbjct: 26 AISC-GQVSSAIALCLSYA----RGQGFAPSAGCCSGVRSLNSAARTTADRRAACNCL-- 78 Query: 315 TGNVPLGLP-INRTLAVTLPKACNSMSVP 398 N G+ +N A ++P C +SVP Sbjct: 79 -KNAARGISGLNAGNAASIPSKC-GVSVP 105
>SPTN4_HUMAN (Q9H254) Spectrin beta chain, brain 3 (Spectrin, non-erythroid beta| chain 3) (Beta-IV spectrin) Length = 2564 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 3/48 (6%) Frame = +2 Query: 299 RLPHPDRQRAA---RPADQPDPRRHAAQGLQLHVRPAPVQRYFGSAPS 433 R P PDR RA +P +P PR G R AP Q GSAP+ Sbjct: 2365 RTPRPDRPRARDRPKPRRRPRPREGGEGGGSRRSRSAPAQG--GSAPA 2410
>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)| Length = 210 Score = 30.0 bits (66), Expect = 2.7 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Frame = +3 Query: 189 FTPCLSFVTNSTNGGGSSPTADCCRSL--------SAVVTTSTSCACLILTGNVPLGLPI 344 F+PC+S V NS + SP + CRSL SA V +C + L L Sbjct: 112 FSPCISGVANSQHSSSQSPRSH-CRSLVPSFIAIYSASVVLCALISCFLDPYETTLPL-T 169 Query: 345 NRTLAVTLPKACNSMSVPLQCKDTSAQ 425 N T +TL ++ S+ +C + ++ Sbjct: 170 NVTNCLTLFRSSGSLRSEHRCSTSDSR 196
>SCND1_HUMAN (P57086) SCAN domain-containing protein 1| Length = 179 Score = 30.0 bits (66), Expect = 2.7 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +2 Query: 305 PHPDRQRAARPADQPDPRRHAAQGLQLHVRPAPV 406 P P AA P P PR A+ L+L + PAPV Sbjct: 48 PEPSSPNAAVPEAIPTPRAAASAALELPLGPAPV 81
>UGPI5_ARATH (Q9C7F7) Uncharacterized GPI-anchored protein At1g27950 precursor| Length = 193 Score = 29.6 bits (65), Expect = 3.5 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 5/84 (5%) Frame = +3 Query: 144 GQGVATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLIL--- 314 G +A C T CL F T G + P+ CC ++ + C C ++ Sbjct: 28 GGALADECNQDF-QKVTLCLDFAT----GKATIPSKKCCDAVEDIKERDPKCLCFVIQQA 82 Query: 315 -TGNVPL-GLPINRTLAVTLPKAC 380 TG L L + + LP +C Sbjct: 83 KTGGQALKDLGVQEDKLIQLPTSC 106
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Frame = +2 Query: 179 HHQLHAVPQLRHQQHQRRXXXXXXXXXXXXXXXXDHEHQLRLPHPDRQRAARPADQPDPR 358 HHQ H V Q + QQH +H ++ H +Q+ + QP P Sbjct: 841 HHQQHGVQQQQQQQH---------------SVQQQQQHNVQQQHGVQQQHVQ--QQPPPS 883 Query: 359 -RHAAQGLQLHVRP 397 +HA +GL + +P Sbjct: 884 YQHATRGLMMQQQP 897
>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)| Length = 780 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +2 Query: 299 RLPHPDRQRAARPADQPDPRRHAAQGLQLHVR 394 R+PHP ARP D +P R A+ G Q+ R Sbjct: 532 RIPHP----VARPRDTVEPERTASSGSQIKTR 559
>RNF39_PANTR (Q7YR31) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 346 TGPSPSRCPRPATPCPSRSSAKILRLSSQLR 438 T SP+ CP PCP RS +RL+ ++R Sbjct: 124 TEASPTACPCCGLPCPRRSLRSNVRLAVEVR 154
>RNF39_MACMU (Q5TM52) RING finger protein 39| Length = 420 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 346 TGPSPSRCPRPATPCPSRSSAKILRLSSQLR 438 T SP+ CP PCP RS +RL+ ++R Sbjct: 124 TEASPTACPCCGLPCPRRSLRSNVRLAVEVR 154
>RNF39_HUMAN (Q9H2S5) RING finger protein 39 (Protein HZFw)| Length = 420 Score = 29.3 bits (64), Expect = 4.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 346 TGPSPSRCPRPATPCPSRSSAKILRLSSQLR 438 T SP+ CP PCP RS +RL+ ++R Sbjct: 124 TEASPTACPCCGLPCPRRSLRSNVRLAVEVR 154
>NLTP6_ARATH (Q9LDB4) Nonspecific lipid-transfer protein 6 precursor (LTP 6)| Length = 113 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Frame = +3 Query: 156 ATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTS-------CACL-I 311 A SC ++I PCLS+VT GG PT CC L+ + + + + C C+ Sbjct: 20 AVSCN-TVIADLYPCLSYVTQ----GGPVPTL-CCNGLTTLKSQAQTSVDRQGVCRCIKS 73 Query: 312 LTGNVPLGLPINRTLAVTLPKAC 380 G + L P A+ LP C Sbjct: 74 AIGGLTLS-PRTIQNALELPSKC 95
>GUXA_CELFI (P50401) Exoglucanase A precursor (EC 3.2.1.91)| (Exocellobiohydrolase A) (1,4-beta-cellobiohydrolase A) (CBP95) Length = 872 Score = 28.9 bits (63), Expect = 5.9 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Frame = +3 Query: 159 TSCTASLITSFTPCL--SFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPL 332 T+ T+ +T TP SF + + G+ A S +A TT + +VP Sbjct: 526 TAATSYTVTGLTPATAYSFTVRAKDAAGNVSAA----SAAAAATTQSGTVTDTTAPSVPA 581 Query: 333 GLPINRTLAVTLP 371 GL T T+P Sbjct: 582 GLTAGTTTTTTVP 594
>TRAC9_MAIZE (P03010) Putative AC9 transposase| Length = 839 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/71 (29%), Positives = 26/71 (36%), Gaps = 5/71 (7%) Frame = +2 Query: 176 AHHQLHAVPQLRHQQHQRRXXXXXXXXXXXXXXXXD-----HEHQLRLPHPDRQRAARPA 340 AHH H QLR ++H + D HE Q P P Q +P Sbjct: 13 AHHHHHQ--QLRRERHFIQSVSSSNANGTATDPSQDDMAIVHEPQ---PQPQPQPEPQPQ 67 Query: 341 DQPDPRRHAAQ 373 QP+P A Q Sbjct: 68 PQPEPEEEAPQ 78
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 201 LSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPLGLPIN 347 LS NS NG S+ D C +L ++ + +L G++P LP N Sbjct: 94 LSLYNNSINGSLSADDFDTCHNLISLDLSEN-----LLVGSIPKSLPFN 137
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 28.9 bits (63), Expect = 5.9 Identities = 17/86 (19%), Positives = 29/86 (33%) Frame = +3 Query: 39 VTSGREVATEIAMDLRXXXXXXXXXXXXXXXXXXXGQGVATSCTASLITSFTPCLSFVTN 218 +TS T + V+ + + S TS T T+ Sbjct: 175 ITSALPTTTSTKLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTTSSTLISTS 234 Query: 219 STNGGGSSPTADCCRSLSAVVTTSTS 296 +++ S+PT +S T+STS Sbjct: 235 TSSSSSSTPTTTSSAPISTSTTSSTS 260
>RRFC_ARATH (Q9M1X0) Ribosome recycling factor, chloroplast precursor| (Ribosome-releasing factor, chloroplast) (RRF) (CpFrr) (RRFHCP) Length = 275 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +3 Query: 192 TPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSC-ACLILTGNVPLGLPIN 347 TP L F N + S P + C R +S+ ++ ST AC T +PLG +N Sbjct: 12 TPVLRFRANYSKPLLSLPDS-CLRIISSAISPSTRLIACSFKTDKLPLGAGVN 63
>G156_PARPR (P13837) G surface protein, allelic form 156 precursor| Length = 2715 Score = 28.5 bits (62), Expect = 7.7 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = +3 Query: 153 VATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPL 332 ++ + I + C S V+++ G S + DC + S+ V +CA +I T + Sbjct: 702 ISNNTADGCIAKPSSCSSLVSSNCRDG-SKASGDCYWNGSSCV--DKTCANIIQTTHNSC 758 Query: 333 GLPINR-------TLAVTLPKACNSMSVPLQCKDTS 419 N+ T TL AC S S CK TS Sbjct: 759 NTTFNQCTVNNGGTACQTLATACTSYSTQENCKFTS 794
>VP41_NPVAC (P32651) Structural glycoprotein gp41| Length = 409 Score = 28.5 bits (62), Expect = 7.7 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 12/84 (14%) Frame = +3 Query: 144 GQGVATSCTASLITSFTPCLSFVTNST--------NGG----GSSPTADCCRSLSAVVTT 287 GQ A +S F P SFV NS NGG G A+ + LS V Sbjct: 157 GQSNAAESLSSDSNIFQP--SFVLNSLPAYAQKFYNGGADMLGKDALAEAAKQLSLAVQY 214 Query: 288 STSCACLILTGNVPLGLPINRTLA 359 + A +T N+P+ LP N+ LA Sbjct: 215 MVAEA---VTCNIPIPLPFNQQLA 235
>NLTPD_BRAOT (Q43304) Nonspecific lipid-transfer protein D precursor (LTP D)| (Wax-associated protein 9D) Length = 118 Score = 28.5 bits (62), Expect = 7.7 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Frame = +3 Query: 195 PCLSFVTNSTNGGGSSPTADCC--RSLSAVVTTST----SCACLILTGNVPLGLP-INRT 353 PC+ ++ + + PTA C SL+ + T+ +C CL+ N LP IN Sbjct: 38 PCIGYLAQNAP---AVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANA---LPTINVA 91 Query: 354 LAVTLPKACNSMSVPLQCKDTS 419 A LPKAC +++P + T+ Sbjct: 92 RAAGLPKAC-GVNIPYKISKTT 112
>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog| Length = 328 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 287 EHQLRLPHPDRQRAARPADQPDPRRHAAQGLQLHVRPAP-VQRYFGSAP 430 +HQ + P+ Q RPA P P+ Q +Q V+PAP Q+ SAP Sbjct: 89 QHQYQPPYASAQ--PRPAAPPQPQAPMQQPVQQPVQPAPQPQQVQPSAP 135
>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog| Length = 328 Score = 28.5 bits (62), Expect = 7.7 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +2 Query: 287 EHQLRLPHPDRQRAARPADQPDPRRHAAQGLQLHVRPAP-VQRYFGSAP 430 +HQ + P+ Q RPA P P+ Q +Q V+PAP Q+ SAP Sbjct: 89 QHQYQPPYASAQ--PRPAAPPQPQAPMQQPVQQPVQPAPQPQQVQPSAP 135
>G168_PARPR (P17053) G surface protein, allelic form 168 precursor| Length = 2704 Score = 28.5 bits (62), Expect = 7.7 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = +3 Query: 153 VATSCTASLITSFTPCLSFVTNSTNGGGSSPTADCCRSLSAVVTTSTSCACLILTGNVPL 332 ++ + I + C S V+++ G S + DC + S+ V +CA + LT + Sbjct: 696 ISNNTADGCIAKPSSCSSLVSSNCRDG-SKASGDCYWNGSSCV--DKTCANITLTSHASC 752 Query: 333 GLPINR-------TLAVTLPKACNSMSVPLQCKDTS 419 N+ T TL AC S S CK TS Sbjct: 753 YSIFNQCTVNNGGTACQTLATACTSYSTQENCKFTS 788 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,635,219 Number of Sequences: 219361 Number of extensions: 879145 Number of successful extensions: 3717 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3430 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3701 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
