ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet02f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUMF1_MOUSE (Q8R0F3) Sulfatase-modifying factor 1 precursor (C-a... 32 0.76
2SUMF1_HUMAN (Q8NBK3) Sulfatase-modifying factor 1 precursor (C-a... 30 2.2
3SEC14_YARLI (P45816) SEC14 cytosolic factor (Phosphatidylinosito... 30 2.2
4ACBD4_PONPY (Q5R7P6) Acyl-CoA-binding domain-containing protein 4 29 4.9
5HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG... 29 6.4
6ANF_CAVPO (P27596) Atrial natriuretic factor precursor (ANF) (At... 29 6.4
7TRPE_AZOBR (P50872) Anthranilate synthase (EC 4.1.3.27) [Include... 29 6.4
8SYS_MANSM (Q65SK3) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--... 28 8.4
9AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 28 8.4

>SUMF1_MOUSE (Q8R0F3) Sulfatase-modifying factor 1 precursor|
           (C-alpha-formyglycine-generating enzyme 1)
          Length = 372

 Score = 32.0 bits (71), Expect = 0.76
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
 Frame = +1

Query: 205 IKAEEAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADLHGADCVAQLHSAASN 384
           I+    F  L +A +   S      +   +L G+     P  A  HG+   AQ +S  +N
Sbjct: 14  IRLARVFLLLVLACEVAGSDEAEAREGAASLAGSCGCGTPQRAGAHGSSAAAQRYSREAN 73

Query: 385 AP--CPGQEP---SKIVPVSEG 435
           AP    G  P   +K+VP+  G
Sbjct: 74  APGLTSGPRPLALTKMVPIPAG 95



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>SUMF1_HUMAN (Q8NBK3) Sulfatase-modifying factor 1 precursor|
           (C-alpha-formyglycine-generating enzyme 1)
          Length = 374

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
 Frame = +1

Query: 232 LQVAIKCRNSAGEYES---KAVGALDGTGAFSVPLAADLHGADCVAQLHSAASNA--PCP 396
           L +++ C  +AG  E+      G+L G+     P     HG+   A  +S  +NA  P P
Sbjct: 23  LLLSLLC-GAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVP 81

Query: 397 GQEP---SKIVPVSEG 435
           G+     SK+VP+  G
Sbjct: 82  GERQLAHSKMVPIPAG 97



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>SEC14_YARLI (P45816) SEC14 cytosolic factor|
           (Phosphatidylinositol/phosphatidylcholine transfer
           protein) (PI/PC TP)
          Length = 492

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -3

Query: 407 GSWPGHGALEAALWSCATQSAPWRSAARGTLKAPVPSRAPTA 282
           G+    GA  AA  S + Q+AP ++A     KAPVP+ A TA
Sbjct: 346 GTAAAGGAAAAAGASSSKQAAPAQAAPAQAAKAPVPAAAKTA 387



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>ACBD4_PONPY (Q5R7P6) Acyl-CoA-binding domain-containing protein 4|
          Length = 269

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -3

Query: 380 EAALWSCATQSAPWRSAARGTLKAPVPSRAPTALLSYS 267
           EAA  +  +  APW   AR  L  PV  R P AL + S
Sbjct: 217 EAAAQAQCSAMAPWAPRARAALLPPVALRRPVALPNVS 254



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>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)|
           (Hydroxymethylbilane synthase) (HMBS)
           (Pre-uroporphyrinogen synthase)
          Length = 329

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 265 GEYESKAVGALDGTGAFSVPLAADLHGADCVAQLHSAAS--NAPCPG 399
           G+   +++  L GTG F+  L   L   +C   +HS      AP PG
Sbjct: 53  GDTSRESLSELGGTGVFATALRDALRNGECDLVVHSLKDLPTAPAPG 99



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>ANF_CAVPO (P27596) Atrial natriuretic factor precursor (ANF) (Atrial|
           natriuretic peptide) (ANP) (Prepronatriodilatin)
           [Contains: Cardiodilatin-related peptide (CDP)]
           (Fragment)
          Length = 128

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 8/41 (19%)
 Frame = -3

Query: 404 SWPGH--------GALEAALWSCATQSAPWRSAARGTLKAP 306
           SWPG         GAL    W  + +SAP +S  R  L AP
Sbjct: 57  SWPGEAGPAQREGGALGRGPWDSSDRSAPLKSKLRALLDAP 97



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>TRPE_AZOBR (P50872) Anthranilate synthase (EC 4.1.3.27) [Includes: Glutamine|
           amidotransferase]
          Length = 732

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
 Frame = +1

Query: 286 VGALDGTGAFSVPLAAD-LHGADCVAQLH--------SAASNAPCPGQEPSK 414
           + AL+G G   +P  A+ L G + +A L         S+AS AP PG+E S+
Sbjct: 87  IDALNGRGQVLLPAVAEALRGLEALAGLEEAPSRVTASSASPAPLPGEERSR 138



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>SYS_MANSM (Q65SK3) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 430

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 214 EEAFKALQVAIKCRNSAGEYESKAVGALDGTGAFSVPLAADL 339
           EE  KALQV  +   +     SKAVGA    G    PL A++
Sbjct: 35  EEQRKALQVETETLQAKRNARSKAVGAAKARGENIAPLLAEM 76



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>AGLU_ASPNG (P56526) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 985

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 313 FSVPLAADLHGADCVAQL---HSAASNAPCPGQEPSKIVPVSEGTT 441
           F++P +AD+ GA  +A +    +A + + CPG + SK+   S G T
Sbjct: 35  FTIPASADV-GAQLIANIDDPQAADAQSVCPGYKASKVQHNSRGFT 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.132    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,826,358
Number of Sequences: 219361
Number of extensions: 737334
Number of successful extensions: 3045
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3044
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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