| Clone Name | baet02c09 |
|---|---|
| Clone Library Name | barley_pub |
>P1_ARATH (Q39172) Probable NADP-dependent oxidoreductase P1 (EC 1.3.1.74)| Length = 345 Score = 123 bits (308), Expect = 3e-28 Identities = 69/136 (50%), Positives = 85/136 (62%), Gaps = 8/136 (5%) Frame = +1 Query: 121 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDG--SVLVKNLYLSCDPYMRPKMSRP--- 285 +++V+LKDYV G+PTE+ + +G SVLVKNLYLSCDPYMR +M +P Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64 Query: 286 ---LHQSYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAML 456 L Q+YT PG PI GYGVS ++ S P GDL+WG+ WE+YSVI P T Sbjct: 65 TAALAQAYT----PGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVI-TPMTHAH 119 Query: 457 TKIQPDDGVPLSYYTG 504 KIQ D VPLSYYTG Sbjct: 120 FKIQHTD-VPLSYYTG 134
>P2_ARATH (Q39173) Probable NADP-dependent oxidoreductase P2 (EC 1.3.1.74)| Length = 343 Score = 122 bits (306), Expect = 6e-28 Identities = 67/131 (51%), Positives = 82/131 (62%), Gaps = 3/131 (2%) Frame = +1 Query: 121 SRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGS--VLVKNLYLSCDPYMRPKMSRPLHQ 294 +++V+ KD+V G+P E+ +GS VLVKNLYLSCDPYMR +M +P Sbjct: 4 NKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKPDPS 63 Query: 295 SYTA-AFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQP 471 S A A+ PG PI GYGVS V+ S P GDL+WG+ GWE+YSVI P M KIQ Sbjct: 64 SALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVI-TPMAHMHFKIQH 122 Query: 472 DDGVPLSYYTG 504 D VPLSYYTG Sbjct: 123 TD-VPLSYYTG 132
>YNCB_ECOLI (P76113) Putative NADP-dependent oxidoreductase yncB (EC 1.-.-.-)| Length = 353 Score = 62.8 bits (151), Expect = 5e-10 Identities = 39/104 (37%), Positives = 54/104 (51%) Frame = +1 Query: 118 KSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 297 ++RR VL G P + L V +G VL++ +YLS DPYMR +MS S Sbjct: 15 RNRRWVLASRPHGAPVPENFRL-EEDDVATPGEGQVLLRTVYLSLDPYMRGRMSD--EPS 71 Query: 298 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSV 429 Y+ G + G VS VV S+ P +GD V G +GW+DY + Sbjct: 72 YSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDI 115
>LTB4D_RABIT (Q28719) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (ADRAB-F) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 349 Score = 53.9 bits (128), Expect = 2e-07 Identities = 39/130 (30%), Positives = 58/130 (44%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 ++++ LK + G+PT++ EL + +G VL++ L+LS DPYMR R Sbjct: 2 VRAKNWTLKKHFHGHPTDSDFEL-KTVELPPLNNGEVLLEALFLSVDPYMRLGSKR---- 56 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 G + G V+ VV S P G LV +GW +S+ L PD Sbjct: 57 -----LKEGDTMMGQQVARVVESKNPAWPVGTLVLAHSGWASHSISDGQQLEKLLTEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 T-LPLSLALG 120
>LTB4D_CAVPO (Q9EQZ5) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (LTB4) (12-HD) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (PGR) Length = 329 Score = 53.5 bits (127), Expect = 3e-07 Identities = 39/130 (30%), Positives = 59/130 (45%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 +K++ LK + +G PT++ EL + ++G VL++ L+LS DPYMR R Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFEL-KTVELPPLKNGEVLLEALFLSVDPYMRIASKR---- 56 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 GA + G V+ VV S AG +V +GW + + L PD Sbjct: 57 -----LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 K-LPLSLALG 120
>LTB4D_HUMAN (Q14914) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 52.8 bits (125), Expect = 5e-07 Identities = 38/130 (29%), Positives = 59/130 (45%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 ++++ LK + GYPT + EL A + ++G VL++ L+L+ DPYMR R Sbjct: 2 VRTKTWTLKKHFVGYPTNSDFEL-KTAELPPLKNGEVLLEALFLTVDPYMRVAAKR---- 56 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 G + G V++VV S + G +V GW +S+ L PD Sbjct: 57 -----LKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 T-IPLSLALG 120
>LTB4D_RAT (P97584) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) (Dithiolethione-inducible gene 1 protein) (D3T-inducible gene 1 protein) (DIG-1) Length = 329 Score = 52.0 bits (123), Expect = 9e-07 Identities = 37/130 (28%), Positives = 59/130 (45%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 ++++ LK + EG+PT+++ EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKTWTLKKHFEGFPTDSNFELR-TTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 G + G V+ VV S G +V + GW +S+ L PD Sbjct: 57 -----LKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 K-LPLSLALG 120
>LTB4D_MOUSE (Q91YR9) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/130 (28%), Positives = 58/130 (44%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 ++++ LK + EG+PT+ + EL + +G VL++ L+LS DPYMR + Sbjct: 2 VQAKSWTLKKHFEGFPTDGNFEL-KTTELPPLNNGEVLLEALFLSVDPYMRVAAKK---- 56 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 G + G V+ VV S G +V + GW +S+ L PD Sbjct: 57 -----LKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 K-LPLSLALG 120
>LTB4D_PIG (Q29073) NADP-dependent leukotriene B4 12-hydroxydehydrogenase (EC| 1.3.1.74) (15-oxoprostaglandin 13-reductase) (EC 1.3.1.48) Length = 329 Score = 48.9 bits (115), Expect = 8e-06 Identities = 37/130 (28%), Positives = 61/130 (46%) Frame = +1 Query: 115 LKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQ 294 ++++ LK + GYPT ++ EL + ++G VL++ L+L+ DPYMR +R L + Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFEL-KTVELPPLKNGEVLLEALFLTVDPYMR-IAARKLKE 59 Query: 295 SYTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPD 474 G + G V+ V+ S G +V + GW +S+ L PD Sbjct: 60 --------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPD 111 Query: 475 DGVPLSYYTG 504 +PLS G Sbjct: 112 T-LPLSLTLG 120
>ZADH1_MOUSE (Q8VDQ1) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 47.0 bits (110), Expect = 3e-05 Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 5/132 (3%) Frame = +1 Query: 124 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 297 +RVVL G P + + + +D +G V V+ LYLS DPYMR KM+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDTGTD 63 Query: 298 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 474 Y A + G G+ V S +A GD V W+ +++ L K+ P Sbjct: 64 YLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDG---NGLEKVDPQ 120 Query: 475 --DGVPLSYYTG 504 DG LSY+ G Sbjct: 121 LVDG-HLSYFLG 131
>YMN1_YEAST (Q03102) Hypothetical 40.0 kDa protein in COX14-COS3 intergenic| region Length = 365 Score = 46.6 bits (109), Expect = 4e-05 Identities = 27/99 (27%), Positives = 49/99 (49%) Frame = +1 Query: 202 DEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSSTPGVA 381 ++ +DG +L++ YLS DP + +S + ++Y PG I G+ +V+ S + Sbjct: 40 EQLKDGELLLETTYLSNDPAQKFWISS-MDKNYAKGVQPGEIIPARGIGKVLASRNKAFS 98 Query: 382 AGDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDGVPLSYY 498 GD V +TGW +++I L K+ + L +Y Sbjct: 99 PGDYVSAVTGWTTHAIISQENVQGLRKLDKNKVGKLWWY 137
>ZADH1_PONPY (Q5R806) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 43.5 bits (101), Expect = 3e-04 Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Frame = +1 Query: 124 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 297 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 298 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 474 Y + + G G+ + S + GD V W+ ++ L K+ P Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDG---NSLEKVDPQ 120 Query: 475 --DGVPLSYYTG 504 DG LSY+ G Sbjct: 121 LVDG-HLSYFLG 131
>ZADH1_HUMAN (Q8N8N7) Zinc-binding alcohol dehydrogenase domain-containing| protein 1 (EC 1.-.-.-) Length = 351 Score = 43.5 bits (101), Expect = 3e-04 Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 5/132 (3%) Frame = +1 Query: 124 RRVVLKDYV--EGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQS 297 +RVVL G P + + D +G V V+ LYLS DPYMR +M+ Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTD 63 Query: 298 YTAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGM-TGWEDYSVIKAPFTAMLTKIQPD 474 Y + + G G+ + S + GD V W+ ++ L K+ P Sbjct: 64 YITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDG---NSLEKVDPQ 120 Query: 475 --DGVPLSYYTG 504 DG LSY+ G Sbjct: 121 LVDG-HLSYFLG 131
>SYE_TOBAC (Q43794) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA| ligase) (GluRS) Length = 569 Score = 30.8 bits (68), Expect = 2.2 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Frame = +1 Query: 211 EDGSVLVKN---LYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRS----ST 369 +D +L+K+ L + + +S PL++ T A G PI GVSEV +S Sbjct: 409 QDAVLLLKDGIDLITDSEKALSSLLSYPLYE--TLASAEGKPILEDGVSEVAKSLLAAYD 466 Query: 370 PGVAAGDLVWGMTGWEDYS 426 G +G L G GW+ ++ Sbjct: 467 SGELSGALAEGQPGWQKWA 485
>JHD1_USTMA (Q4P5U1) JmjC domain-containing histone demethylation protein 1 (EC| 1.14.11.-) Length = 669 Score = 30.8 bits (68), Expect = 2.2 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%) Frame = +1 Query: 181 LLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSR----------PLHQSYTAAFVPGAPI 330 L+PA P ++ V K ++ P RPK +R P H S VP + Sbjct: 216 LVPAPPDRSSQAPHVQAKAEDVAASPVPRPKPARAKKQATHRLVPCHTSIPGMVVPPPEM 275 Query: 331 TGYGVSEVVRSSTP-------GVAAGDLVWGMTGWEDY 423 + + V++++ TP ++ W ++ W +Y Sbjct: 276 SIFDVADIIGHDTPVEVIDVASQSSSKASWTISEWAEY 313
>MATB_NEUCR (P36981) Mating- type protein a-1 (Mt a-1)| Length = 382 Score = 30.0 bits (66), Expect = 3.7 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 10/118 (8%) Frame = +1 Query: 157 YPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFV--PGAPI 330 Y + H E+ P + SV+V N++ P++R K ++ T + P Sbjct: 126 YRKDHHREIREQNPGLHNNEISVIVGNMWRDEQPHIREKYFNMSNEIKTRLLLENPDYRY 185 Query: 331 TGYGVSEVVRSSTPGVAA--------GDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDG 480 ++ R +P + G+L+WG ED ++I+ F ++ + DDG Sbjct: 186 NPRRSQDIRRRVSPYLKIKLLNYDVNGNLLWGTVNAEDAALIRTHFHGVVRVEEMDDG 243
>MYO1A_MOUSE (O88329) Myosin Ia (Brush border myosin I) (BBM-I) (BBMI) (Myosin I| heavy chain) (MIHC) (Fragment) Length = 909 Score = 29.6 bits (65), Expect = 4.9 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +1 Query: 94 RRRSMAELKSRRVVLKD-YVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 267 R S K++ +LK + EG P EA ++ P A +VL+KNLY Y+R Sbjct: 529 RDLSQTMWKAQHPLLKSLFPEGNPKEASLKRPPTAGTQFKNSVAVLMKNLYSKNPNYIR 587
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/85 (22%), Positives = 37/85 (43%) Frame = +1 Query: 88 PRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMR 267 P ++ L+ + +D E T A ++ L ++ ++ ++LYL DP +R Sbjct: 509 PTHQQGQPALELKEESFRDPAEVLGTGAEVDYLEQFGTSSFKESALRKQSLYLKFDPLLR 568 Query: 268 PKMSRPLHQSYTAAFVPGAPITGYG 342 RP+ + + + GA T G Sbjct: 569 DSPGRPVPVATETSSMHGANETPSG 593
>P60_LISGR (Q01835) Protein p60 precursor (Invasion-associated protein)| Length = 511 Score = 29.3 bits (64), Expect = 6.4 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +1 Query: 301 TAAFVPGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGWEDYSVIKAPFTAMLTKIQPDDG 480 T G +T + VV ++T VA+GD +WG+ +V + L K+ D Sbjct: 7 TIVSAAGIAVTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQ---LKQLNKLDSDRI 63 Query: 481 VP 486 VP Sbjct: 64 VP 65
>MOLR_ECOLI (P33345) Molybdate metabolism regulator| Length = 1264 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 70 ARSPVHPRRRRSMAELKSRRVVLKDYVEGYPTEAHMELLPAAP--VDEAEDGS 222 A S + P R+ +LK+ R + ++ YP A LLPAAP EA+D + Sbjct: 678 AASELAPAVARAFNKLKTLRENARSWLLKYPEHALTGLLPAAPGKAGEAQDNA 730
>ASK1_ASHGO (Q75DE8) DASH complex subunit ASK1 (Outer kinetochore protein ASK1)| (Associated with spindles and kinetochores protein 1) Length = 181 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%) Frame = +1 Query: 163 TEAHMELLPAAPVDEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSY----TAAFVPGAP 327 TE H+ +P + DE +DGS L + + R K+S L Q Y +++FV +P Sbjct: 102 TEGHVLAVPVSSDDEPDDGSTLQRQ-------HKRRKLSLQLQQRYGSSSSSSFVSRSP 153
>RUVC_NITOC (Q3JES5) Crossover junction endodeoxyribonuclease ruvC (EC| 3.1.22.4) (Holliday junction nuclease ruvC) (Holliday juction resolvase ruvC) Length = 174 Score = 28.9 bits (63), Expect = 8.3 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +1 Query: 316 PGAPITGYGVSEVVRSSTPGVAAGDLVWGMTGW-EDYSVIKAPFTAMLTKIQPDD 477 PG+ ITGYG+ E T +AAG + G G E I T ++ PD+ Sbjct: 9 PGSRITGYGLIETNNKKTVYIAAGCIRAGEGGLAERLGQIFQGITGIIQAYHPDE 63
>SPD3_MOUSE (Q6P6N5) Sprouty-related, EVH1 domain-containing protein 3| (Spred-3) Length = 408 Score = 28.9 bits (63), Expect = 8.3 Identities = 34/134 (25%), Positives = 48/134 (35%), Gaps = 6/134 (4%) Frame = +1 Query: 40 RSRSVALHRLARSPVHPRRRRSMA----ELKSRRVVLKDYVEGYPTEAH--MELLPAAPV 201 +S AL L+R + P S + + L +V+ + +H E P AP+ Sbjct: 104 KSLLAALAALSRGSLTPSSSSSSSSPSQDTAETPCPLTSHVDSDSSSSHSRQETPPTAPI 163 Query: 202 DEAEDGSVLVKNLYLSCDPYMRPKMSRPLHQSYTAAFVPGAPITGYGVSEVVRSSTPGVA 381 E + RP+ R QSY P P TG + S Sbjct: 164 ATVESAAAFPLAT--------RPQRRRSSAQSYP----PLLPFTG-----IPEPSESLAG 206 Query: 382 AGDLVWGMTGWEDY 423 AG WG G+EDY Sbjct: 207 AGSQGWGSRGYEDY 220 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,346,577 Number of Sequences: 219361 Number of extensions: 915822 Number of successful extensions: 3795 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 3676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3778 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)