ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet02b04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 26 2.1

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 25.8 bits (55), Expect(2) = 2.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 2   TGSYTIAIISFLDVFG 49
           +G YT+  +SFLDVFG
Sbjct: 57  SGMYTMVTMSFLDVFG 72



 Score = 22.7 bits (47), Expect(2) = 2.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 60  YHLDLSGH 83
           YHLDLSGH
Sbjct: 77  YHLDLSGH 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,826,080
Number of Sequences: 219361
Number of extensions: 60743
Number of successful extensions: 160
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 80,573,946
effective HSP length: 6
effective length of database: 79,257,780
effective search space used: 1902186720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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