ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet02a10 |
|---|---|
| Clone Library Name | barley_pub |
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 120 bits (300), Expect = 2e-27 Identities = 63/141 (44%), Positives = 93/141 (65%), Gaps = 2/141 (1%) Frame = +2 Query: 44 QSMLFSATMPSWVKKLSRRYLNNPLT-IDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSD 220 Q++LFSAT P WV ++++Y+ + +DL+G + +K A ++ AI T + ++ D Sbjct: 442 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWTERAAVIGD 501 Query: 221 LITVYA-KGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFT 397 +I VY+ G+TI+F TK+DA E+S +++LHGDI Q QRE TL GFR G F Sbjct: 502 VIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFG 561 Query: 398 VLVATDVASRGLDIPNGDLII 460 VLVAT+VA+RGLDIP DL++ Sbjct: 562 VLVATNVAARGLDIPEVDLVV 582
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 119 bits (299), Expect = 3e-27 Identities = 64/146 (43%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Frame = +2 Query: 44 QSMLFSATMPSWVKKLSRRYLNNPLT-IDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSD 220 Q++LFSAT P WV ++++Y+ + +DL+G + +K A ++ AI T + ++ D Sbjct: 370 QTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGD 429 Query: 221 LITVYA-KGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFT 397 +I VY+ G+TI+F TK++A E+S +++LHGDI Q QRE TL GFR G F Sbjct: 430 VIRVYSGHQGRTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFG 489 Query: 398 VLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT+VA+RGLDIP DL+I P Sbjct: 490 VLVATNVAARGLDIPEVDLVIQSSPP 515
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 117 bits (292), Expect = 2e-26 Identities = 61/146 (41%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Frame = +2 Query: 44 QSMLFSATMPSWVKKLSRRYLNNPLT-IDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSD 220 Q++LFSAT P WV K++++Y+ + +DLVG +K A ++ AI + + ++ D Sbjct: 318 QTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGD 377 Query: 221 LITVYAKG-GKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFT 397 ++ VY+ G+ I+F TK++ E+++ ++ LHGDI+Q QRE TL GFR+G F Sbjct: 378 VLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFK 437 Query: 398 VLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT+VA+RGLDIP DL+I P Sbjct: 438 VLVATNVAARGLDIPEVDLVIQSSPP 463
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 117 bits (292), Expect = 2e-26 Identities = 61/146 (41%), Positives = 94/146 (64%), Gaps = 2/146 (1%) Frame = +2 Query: 44 QSMLFSATMPSWVKKLSRRYLNNPLT-IDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSD 220 Q++LFSAT P WV K++++Y+ + +DLVG +K A ++ AI + + ++ D Sbjct: 321 QTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWSQRPAVIGD 380 Query: 221 LITVYAKG-GKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFT 397 ++ VY+ G+ I+F TK++ E+++ ++ LHGDI+Q QRE TL GFR+G F Sbjct: 381 VLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFK 440 Query: 398 VLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT+VA+RGLDIP DL+I P Sbjct: 441 VLVATNVAARGLDIPEVDLVIQSSPP 466
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 103 bits (258), Expect = 2e-22 Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P ++ L+R +L + L++ VG E + + ++ + KR++ Sbjct: 384 ERQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY----VEDHDKRSV 439 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ + G T++F TKR AD +S L + A+HGD +Q +RER L FR G Sbjct: 440 LLDILHTHGTSGLTLIFVETKRMADALSDFLLNQRFPATAIHGDRTQRERERALEMFRSG 499 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 500 RCPILVATAVAARGLDIPNVTHVINYDLP 528
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 103 bits (258), Expect = 2e-22 Identities = 64/157 (40%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ +LQ +P ER++MLFSATM + V KL R L NP+ +++ D +K + + Sbjct: 268 IDKLLQSIPRERRTMLFSATMTTKVAKLQRASLKNPVRVEV--DTKYTTVSTLKQHYMFM 325 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K T L L A G IVFTRT D+ +S+ L + LHG +SQ R Sbjct: 326 PFAHKDTYLVHLANEQA-GHSIIVFTRTVHDSQRLSILLRLLGFPAIPLHGQLSQQARLG 384 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LN F+ G ++LVATDVASRGLDIP DL+++Y++P Sbjct: 385 ALNKFKTGGRSILVATDVASRGLDIPAVDLVVNYDIP 421
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 103 bits (256), Expect = 3e-22 Identities = 57/149 (38%), Positives = 92/149 (61%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L++ +L L++ VG E + + I+ + KR++ Sbjct: 384 DRQTLMFSATFPRDIQLLAKDFLKEYVFLSVGRVGSTSENITQKIEY----VEDDDKRSV 439 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ GG T++F TKR AD +S L + I + ++HGD +Q +RER L FR G Sbjct: 440 LLDVLASMPSGGLTLIFVETKRMADMLSDFLLRSKIGATSIHGDRTQRERERALELFRSG 499 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 K ++VAT VA+RGLDIPN +++Y+LP Sbjct: 500 KTPIMVATAVAARGLDIPNVTHVVNYDLP 528
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 103 bits (256), Expect = 3e-22 Identities = 57/149 (38%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L+R +L + L++ VG E + + ++ + KR++ Sbjct: 382 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKVEY----VEDHDKRSV 437 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ + G T++F TKR AD +S L + A+HGD +Q +RER L FR G Sbjct: 438 LLDILHTHGTSGLTLIFVETKRMADSLSDFLLNQRFPATAIHGDRTQRERERALEMFRSG 497 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 498 RCPILVATAVAARGLDIPNVTHVINYDLP 526
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 101 bits (251), Expect = 1e-21 Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L+R +L + L++ VG E + + ++ + KR++ Sbjct: 388 DRQTLMFSATFPRDIQILARDFLKDYIFLSVGRVGSTSENITQKVEY----VEDIDKRSV 443 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ +A GG T++F TKR AD +S + + + ++HGD +Q +RER L FR G Sbjct: 444 LLDILHTHA-GGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEMFRNG 502 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 503 RCPILVATAVAARGLDIPNVTHVINYDLP 531
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 100 bits (250), Expect = 1e-21 Identities = 64/158 (40%), Positives = 96/158 (60%), Gaps = 2/158 (1%) Frame = +2 Query: 8 VETILQQLPAE-RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 ++ IL+ +P + R + LFSATM S + KL R L N T+ + + + I Sbjct: 231 LDRILKNIPTKVRTTYLFSATMTSKIDKLQRASLTN--TVKCAVSNKYQTVDTLVQTLIV 288 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRE 361 + K T L L+ + G TIVFTRTK +A+ +S L ++ ALHGD++Q+QR Sbjct: 289 VPGGLKNTFLIYLLNEFI-GKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRT 347 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L+ F+ GK ++LVATDVA+RGLDIP+ DL+I+Y++P Sbjct: 348 GALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIP 385
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 100 bits (250), Expect = 1e-21 Identities = 56/149 (37%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P ++ L+R +L + L++ VG E + + + + + + KR+ Sbjct: 364 ERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKV----VHVEDSEKRSY 419 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ G T++F TKR AD ++ L ++ + ++HGD +Q +RER L FR G Sbjct: 420 LLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSG 479 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +++VAT VASRGLDIPN +I+Y+LP Sbjct: 480 RTSIMVATAVASRGLDIPNVTHVINYDLP 508
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 100 bits (248), Expect = 3e-21 Identities = 63/160 (39%), Positives = 97/160 (60%), Gaps = 4/160 (2%) Frame = +2 Query: 8 VETILQQLPAE-RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQD--EKLAEGIKLFA 178 ++ IL +P + R + LFSATM S + KL R L NP+ + + L + + + Sbjct: 231 LDRILNIIPTQGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP 290 Query: 179 IPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQ 355 L T +L++ I G TIVFTRTK +A+ +S L ++ ALHGD++Q+Q Sbjct: 291 GGLKNTFLIYLLNEFI-----GKSTIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQ 345 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R L+ F+ GK ++LVATDVA+RGLDIP+ D++I+Y++P Sbjct: 346 RTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIP 385
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 99.8 bits (247), Expect = 3e-21 Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P +R + LFSATM S V+KL R L +P+ + + + A+ + + + Sbjct: 228 LDKILKVIPRQRNTYLFSATMTSKVEKLQRASLVDPVRVAV--STKYQTADNLLQYMVFC 285 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K T L L++ A G I+F RTK D +SL L + LHGD+SQ R Sbjct: 286 PFKHKDTHLVYLVSENA-GNSMIIFARTKSDTQRISLLLRNLGYGAIPLHGDLSQTARLG 344 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LN F+ G +L+ATDVASRGLDIP DL+I+Y++P Sbjct: 345 ALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIP 381
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 99.8 bits (247), Expect = 3e-21 Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 ED+E I+ ++P RQ++LFSATMP +K++ +++ P + + E E + + I Sbjct: 162 EDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAK--ELTTELVDQYYI 219 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 + K ++ L+ V A+ IVF RTKR DE++ L +E +HGD+ Q++R Sbjct: 220 RVKEQEKFDTMTRLMDV-AQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKR 278 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R L F+ G VLVATDVA+RGLDI + +Y++P Sbjct: 279 LRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIP 317
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 99.8 bits (247), Expect = 3e-21 Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 ED+E I+ ++P RQ++LFSATMP +K++ +++ P + + E E + + I Sbjct: 162 EDIEAIISRVPENRQTLLFSATMPDAIKRIGVQFMKAPEHVKIAAK--ELTTELVDQYYI 219 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 + K ++ L+ V A+ IVF RTKR DE++ L +E +HGD+ Q++R Sbjct: 220 RVKEQEKFDTMTRLMDV-AQPELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQNKR 278 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R L F+ G VLVATDVA+RGLDI + +Y++P Sbjct: 279 LRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIP 317
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 99.4 bits (246), Expect = 4e-21 Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 14/172 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P E Q+ LFSATMP ++++S+R++ NP Q+ K+ I Sbjct: 168 EDVETIMSQIPKEHQTALFSATMPEAIRRISKRFMKNP--------QEIKIQSNI----- 214 Query: 182 PLTTTSKRTILSDLITVYAKG-------------GKTIVFTRTKRDADEVSLALTTS-IA 319 T++ I VY + TI+F +TK EVS AL + Sbjct: 215 ----TTRPDIKQSYWMVYGRKTDALIRFLEVEDFSATIIFVKTKNATLEVSEALERNGYN 270 Query: 320 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ +I+Y++P Sbjct: 271 SAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVDRISFVINYDIP 322
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 99.4 bits (246), Expect = 4e-21 Identities = 62/172 (36%), Positives = 90/172 (52%), Gaps = 14/172 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P E Q+ LFSATMP ++++S+R++ NP K I Sbjct: 168 EDVETIMAQIPKEHQTALFSATMPEAIRRISKRFMRNP-----------------KEIKI 210 Query: 182 PLTTTSKRTILSDLITVYAKG-------------GKTIVFTRTKRDADEVSLAL-TTSIA 319 T++ I VY + TI+F RTK EVS AL Sbjct: 211 QSNITTRPDIKQSYWMVYGRKTDALIRFLEAEDFSATIIFVRTKNATLEVSEALERNGYN 270 Query: 320 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ +I+Y++P Sbjct: 271 SAALNGDMNQALREQTLERLKNGRLDILIATDVAARGLDVDRISFVINYDIP 322
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 99.4 bits (246), Expect = 4e-21 Identities = 57/149 (38%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P+ ++ L+R +L++ L++ VG E + + + + + K++ Sbjct: 334 ERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSENITQKV----LYVENQDKKSA 389 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L DL++ + G T++F TKR AD+++ + + + A+HGD +Q +RER L FR G Sbjct: 390 LLDLLSA-STDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSG 448 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 T+LVAT VA+RGLDIPN +I+Y+LP Sbjct: 449 AATLLVATAVAARGLDIPNVTHVINYDLP 477
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 99.4 bits (246), Expect = 4e-21 Identities = 58/159 (36%), Positives = 93/159 (58%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E VE I++ LP ER +MLFSAT+P ++KLSR+Y+ NP I++ I+ I Sbjct: 163 EQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAG--LTTRNIEHAVI 220 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 + +K ++L D++ I+F RTK ++++ L + +HG + Q R Sbjct: 221 QVREENKFSLLKDVLMT-ENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDR 279 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F++G++ LVATDVA+RG+DI N L+I+Y+LP Sbjct: 280 FDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLP 318
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 99.4 bits (246), Expect = 4e-21 Identities = 54/157 (34%), Positives = 97/157 (61%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLFAIP 184 + I++++P +RQ+++++AT P V+K++ L N + ++ +G+ DE +A + I Sbjct: 312 IRKIVKEVPVQRQTLMYTATWPKGVRKIAADLLVNSVQVN-IGNVDELVANKSITQHIEV 370 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRER 364 + K+ + ++ G K I+F TK+ D++S LT + + A+HGD SQ +R+ Sbjct: 371 VLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQGERDY 430 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L+ FR G+ VLVATDVA+RGLDI + ++I+Y+ P Sbjct: 431 VLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFP 467
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 99.0 bits (245), Expect = 6e-21 Identities = 58/148 (39%), Positives = 94/148 (63%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+++FSAT P+ ++ L+ +L + L++ VG E + + + + + KR++L Sbjct: 338 RQTLMFSATFPTDIQHLAADFLKDYIFLSVGRVGSTSENITQKV----LHVEDIDKRSVL 393 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ + GG T+VF TKR AD ++ + ++++ A+HGD +Q +RER L FR G+ Sbjct: 394 LDLLAA-SDGGLTLVFVETKRMADALTDFLIMQNLSATAIHGDRTQAERERALAFFRTGR 452 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDIPN +I+Y+LP Sbjct: 453 ANVLVATAVAARGLDIPNVTHVINYDLP 480
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 98.6 bits (244), Expect = 7e-21 Identities = 62/160 (38%), Positives = 94/160 (58%), Gaps = 3/160 (1%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 D+ +L +LPA+RQ++LFSAT +K L+ + L+NPL I++ + ++ + Sbjct: 169 DIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVA--RRNTASDQVTQHVHF 226 Query: 185 LTTTSKRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQ 355 + KR +LS +I KG + +VFTRTK A+ ++ L I S A+HG+ SQ Sbjct: 227 VDKKRKRELLSHMI---GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGA 283 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R R L F+ G VLVATD+A+RGLDI +++YELP Sbjct: 284 RTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYELP 323
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 98.6 bits (244), Expect = 7e-21 Identities = 63/157 (40%), Positives = 93/157 (59%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 +E IL+ LP ER++ LFSATM S V+ L R L +PL + + ++ ++ +K + + Sbjct: 254 LEKILKFLPRERRTFLFSATMSSKVESLQRASLRDPLKVSVSSNKYATVST-LKSNYVFI 312 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K T L L +A G I+FTRT + +++ L T + + LHG +SQ R Sbjct: 313 PHMHKDTYLVYLCNEFA-GQTIIIFTRTVLETQRIAILLRTLGMGAIPLHGGLSQSARLG 371 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LN FR G +LVATDVA+RGLDIPN D +I+++LP Sbjct: 372 ALNKFRAGSREILVATDVAARGLDIPNVDCVINHDLP 408
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 98.6 bits (244), Expect = 7e-21 Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 +D+++++QQ A RQ+++F+AT P V++L+ ++N+P+ + +GD++E A + I Sbjct: 278 QDIKSVMQQTNHANRQTLMFTATWPKEVRELASTFMNSPVKVS-IGDRNELSANKRITQI 336 Query: 176 AIPLTTTSKRTILSDLITVYAKGG----KTIVFTRTKRDADEV-SLALTTSIASEALHGD 340 + K L L+ Y G K ++F K++A + +L + S A+HGD Sbjct: 337 VEVIEPYDKEKKLLSLLRKYQSGSNKDDKVLIFALYKKEATRIENLLVRNSFKVSAVHGD 396 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR L F+ GK T+L+ATDVA+RGLDIPN ++I+ P Sbjct: 397 LSQQQRTSALGAFKAGKTTLLLATDVAARGLDIPNVKVVINLTFP 441
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 98.6 bits (244), Expect = 7e-21 Identities = 60/157 (38%), Positives = 95/157 (60%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P ER++ LFSAT+ S ++ L R L +P+ + + ++ + ++ ++ + + Sbjct: 224 IDKILKFVPRERRTYLFSATISSKIESLQRASLRDPVKVSISSNKYQTVSTLLQNYLF-I 282 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K L LI +A G TIVFTRT + VS+ L T + LHG +SQ R Sbjct: 283 PHPQKDVHLIYLINEHA-GQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLG 341 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LN FR G +LVATDVA+RGLDIP+ D++++Y+LP Sbjct: 342 ALNKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLP 378
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 97.8 bits (242), Expect = 1e-20 Identities = 63/161 (39%), Positives = 100/161 (62%), Gaps = 5/161 (3%) Frame = +2 Query: 8 VETILQQLPA-ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQD--EKLAEGIKLFA 178 ++ IL+ +P ER + LFSATM S + KL R L NP+ + + L + + + Sbjct: 245 LDRILKIIPTQERTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP 304 Query: 179 IPLTTTSKRTILSDLITVYAKGGKT-IVFTRTKRDADEVS-LALTTSIASEALHGDISQH 352 L T +L++ I GKT I+FTRTK +A+ +S L ++ ALHGD++Q+ Sbjct: 305 GGLKNTYLIYLLNEFI------GKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQN 358 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR +L+ F+ GK ++LVATDVA+RGLDIP+ D++++Y++P Sbjct: 359 QRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIP 399
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 97.4 bits (241), Expect = 2e-20 Identities = 58/149 (38%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L+R +L + L++ VG E + + I + + K+++ Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSENITQKI----LYVEDDEKKSV 433 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQRERTLNGFRQG 388 + DL++ + G TIVFT TKR AD ++ L + A+HGD SQ++RE+ L F+ G Sbjct: 434 ILDLLSAN-ENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNG 492 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 493 AAPILVATAVAARGLDIPNVSHVINYDLP 521
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 97.4 bits (241), Expect = 2e-20 Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L+R +L + L++ VG E + + ++ + KR++ Sbjct: 380 DRQTLMFSATFPRDIQMLARDFLKDYIFLSVGRVGSTSENITQKVEY----VEDVDKRSV 435 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L D++ +A G T++F TKR AD +S + + + ++HGD +Q +RER L FR G Sbjct: 436 LLDILHSHANG-LTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALEFFRNG 494 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIP+ +I+Y+LP Sbjct: 495 RCPILVATAVAARGLDIPHVTHVINYDLP 523
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 97.4 bits (241), Expect = 2e-20 Identities = 57/149 (38%), Positives = 92/149 (61%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P ++ L+R +L++ L++ VG E + + I + + K + Sbjct: 337 ERQTLMFSATFPHDIQHLARDFLHDYIFLSVGRVGSTSENITQRI----LYVENRDKNSA 392 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQG 388 L DL+ + T++F TKR AD+++ + + ++ A+HGD SQ +RER L FR G Sbjct: 393 LLDLLAA-SNDNLTLIFVETKRMADQLTDFLIMQNFSATAIHGDRSQAERERALAAFRSG 451 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 452 RANILVATAVAARGLDIPNVTHVINYDLP 480
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 97.1 bits (240), Expect = 2e-20 Identities = 61/162 (37%), Positives = 95/162 (58%), Gaps = 4/162 (2%) Frame = +2 Query: 2 EDVETILQQL-PAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++ I+ P RQ+++FSAT P V+KL+ ++ P + ++G++DE A + I Sbjct: 286 EDIKKIIGSTRPTGRQTVMFSATWPPEVRKLAEGFMKTPTKV-MIGERDELAANKRITQS 344 Query: 176 AIPLTTTSKRTILSDLITVYAKGG-KTIVFTRTKRDADEVSLALTT-SIASEALHGDISQ 349 L +K L DL+ YA K ++F K++A V LT A+HGD+SQ Sbjct: 345 VEVLDPRAKEGRLLDLLRQYANDDFKILIFALYKKEATRVENTLTRRGYGVAAIHGDLSQ 404 Query: 350 HQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR + L+ F++G+ +L+ATDVA+RGLDIPN L+I+ P Sbjct: 405 QQRTKALDEFKKGEKNILLATDVAARGLDIPNVKLVINLTFP 446
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 96.7 bits (239), Expect = 3e-20 Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 14/172 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ ++P Q+ LFSATMP ++++SRR++ NP K I Sbjct: 168 EDVETIMTEIPDRHQTALFSATMPEAIRRISRRFMKNP-----------------KEIRI 210 Query: 182 PLTTTSKRTILSDLITVYAKG-------------GKTIVFTRTKRDADEVSLALTT-SIA 319 T++ I VY K TI+F RTK EVS L Sbjct: 211 QSNITTRPDIQQSYWMVYGKKTDALIRFLEAEDFSATIIFVRTKNATLEVSEVLERYGYN 270 Query: 320 SEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ +I+Y++P Sbjct: 271 SAALNGDMNQSLREQTLEKLKDGRLDILIATDVAARGLDVDRISFVINYDIP 322
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 96.7 bits (239), Expect = 3e-20 Identities = 63/161 (39%), Positives = 99/161 (61%), Gaps = 5/161 (3%) Frame = +2 Query: 8 VETILQQLPAE-RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQD--EKLAEGIKLFA 178 ++ IL+ +P + R + LFSATM S + KL R L NP+ + + L + + + Sbjct: 237 LDRILKIIPTKGRTTYLFSATMTSKIDKLQRASLTNPVKCAVSNKYQTVDTLVQTLMVVP 296 Query: 179 IPLTTTSKRTILSDLITVYAKGGKT-IVFTRTKRDADEVS-LALTTSIASEALHGDISQH 352 L T +L++ I GKT I+FTRTK +A+ +S L ++ ALHGD++Q+ Sbjct: 297 GGLKNTFLIYLLNEFI------GKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQN 350 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR L+ F+ GK ++LVATDVA+RGLDIP+ D++I+Y++P Sbjct: 351 QRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIP 391
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 96.3 bits (238), Expect = 4e-20 Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 +RQ+++FSAT P ++ L+R +L L++ VG E + + I + + K+++ Sbjct: 348 DRQTLMFSATFPKEIQFLARDFLKEYIFLSVGRVGSTSENITQKI----LYVEDEEKKSV 403 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQRERTLNGFRQG 388 L DL++ G TI+FT TKR AD ++ L + A+HGD SQ++RE+ L F+ G Sbjct: 404 LLDLLSAN-DNGLTIIFTETKRMADNLADFLYDQGFPATAIHGDRSQYEREKALAAFKTG 462 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDIPN I++Y+LP Sbjct: 463 TAPILVATAVAARGLDIPNVSHIVNYDLP 491
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 96.3 bits (238), Expect = 4e-20 Identities = 59/157 (37%), Positives = 93/157 (59%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P +R + LFSATM + ++KL R L+NP+ + + + A+ + + + Sbjct: 147 LDKILKVIPIKRTTYLFSATMTNKIEKLQRASLHNPVRVAV--SSKYQTADNLVQSMMLV 204 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSL-ALTTSIASEALHGDISQHQRER 364 K TIL L+ + G IVFTRT A +L A + LHG +SQ QR Sbjct: 205 NDGYKNTILIHLLNEFM-GKSIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLG 263 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ + +LVATDVA+RGLDIP+ D++I+Y++P Sbjct: 264 SLNKFKSNQANILVATDVAARGLDIPSVDVVINYDIP 300
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 95.9 bits (237), Expect = 5e-20 Identities = 56/158 (35%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + ILQQ+ +RQ+++FSAT P V++L+ +LNN ++ +G + +K Sbjct: 298 IRKILQQIRPDRQTLMFSATWPKEVQRLAGDFLNNYAQVN-IGSTELAANHNVKQIIEVC 356 Query: 188 TTTSKR-TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 T K+ ++ L T+ A+ GK I+FT TKR AD+++ L + A+HGD Q +R+ Sbjct: 357 TEFEKKGKLIGHLETISAENGKVIIFTSTKRVADDLTKFLRQDGWPALAIHGDKQQQERD 416 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L F+ G+ ++VAT VASRGLD+ + +I+Y+ P Sbjct: 417 WVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFP 454
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 95.9 bits (237), Expect = 5e-20 Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P ++ L+R +L LT+ VG E + + ++ + KR++ Sbjct: 356 ERQTLMFSATFPREIQNLARSFLKEYIFLTVGRVGSTSENITQRVEY----VDDQDKRSL 411 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQRERTLNGFRQG 388 L DL+ GG +VF TKR AD + + + ++HGD +Q +RE L F+ G Sbjct: 412 LLDLLLAEQSGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQREREAALYAFKSG 471 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVAT VA+RGLDIPN +I Y+LP Sbjct: 472 RAPILVATAVAARGLDIPNVTHVILYDLP 500
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 95.5 bits (236), Expect = 6e-20 Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P +R + LFSATM + + KL R L+NP+ + + + A+ + + + Sbjct: 229 LDKILKIIPTQRTTYLFSATMTNKIAKLQRASLHNPVRVAV--SNKYQTADNLVQSMMLV 286 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSL-ALTTSIASEALHGDISQHQRER 364 + K T L L+ + G I+FTRT + +L A ++ LHG ++Q QR Sbjct: 287 SDGYKNTYLIHLLNEFL-GKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLG 345 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ GK +L+ATDVA+RGLDIP+ D++I+Y++P Sbjct: 346 SLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIP 382
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 95.1 bits (235), Expect = 8e-20 Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ LP ER++ LFSATM S V+ L R L+NPL + + ++ + ++ ++ + L Sbjct: 216 LDKILKVLPRERRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVSTLLQSYLF-L 274 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K L L+ + G TI+FTRT + +S L + + LHG +SQ R Sbjct: 275 PHKHKDIYLVYLLNEFV-GQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLG 333 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L FR +LVATDVA+RGLDIP+ D++++++LP Sbjct: 334 ALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLP 370
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 94.7 bits (234), Expect = 1e-19 Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ+++FSAT P V++L+R YLN+ + + VG D + IK + Sbjct: 290 IRKIVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVT-VGSLDLAASHNIKQIVEVV 348 Query: 188 TTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 KR L I K K ++FT TKR AD+++ L + A+HGD +Q +R Sbjct: 349 DNADKRARLGKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDER 408 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN FR GK ++VATDVASRG+D+ + +Y+ P Sbjct: 409 DWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNYDFP 447
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 94.7 bits (234), Expect = 1e-19 Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLPA-ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++ I+ Q + +RQ+++F+AT P V++L+ ++ P+ + +G++DE A + I Sbjct: 291 EDIKRIIGQTKSKDRQTLMFTATWPKEVRELASTFMKEPVKVS-IGNRDELSANKRITQI 349 Query: 176 AIPLTTTSKRTILSDLITVYAKG----GKTIVFTRTKRDADEVSLALT-TSIASEALHGD 340 + SK L DL+ Y G K ++F K++A V L A+HGD Sbjct: 350 VEVVDPRSKERKLLDLLKKYQSGPKKNDKVLIFALYKKEASRVERNLNYNGYKVAAIHGD 409 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR + LN F+ GK +L+ATDVA+RGLDIPN +I+ P Sbjct: 410 LSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFP 454
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 94.4 bits (233), Expect = 1e-19 Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +DVE IL + P +Q LFSATMP ++KLS +YL++P + +AE I I Sbjct: 175 DDVERILSETPEYKQVALFSATMPPAIRKLSAKYLHDPFEVTCKAKT--AVAENISQSYI 232 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 + K L+ ++ V IVF RTK+ +E++ L ++ A+ GD+ Q QR Sbjct: 233 QVAR--KMDALTRVLEVEPFEAM-IVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQR 289 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 ERT+ R G +LVATDVA+RGLD+ +++Y++P Sbjct: 290 ERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIP 328
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 94.0 bits (232), Expect = 2e-19 Identities = 58/165 (35%), Positives = 96/165 (58%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++TI+ +ERQ+++F+AT P V++L+ ++N+P+ + VGD+DE A + I Sbjct: 315 EDIKTIISNTSNSERQTLMFTATWPKEVRELANNFMNSPVKVT-VGDRDELSANKRITQV 373 Query: 176 AIPLTTTSKRTILSDLITVY----AKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGD 340 + K L L+ Y + K ++F K++A + L + S A+HGD Sbjct: 374 VEVINKFDKEKKLIQLLRKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGD 433 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR L+ F+ G+ +L+ATDVA+RGLDIPN ++I+ P Sbjct: 434 LSQQQRTAALSAFKSGQSNLLLATDVAARGLDIPNVKVVINLTFP 478
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 94.0 bits (232), Expect = 2e-19 Identities = 58/165 (35%), Positives = 95/165 (57%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLPA-ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++ I+++ A +RQ+++F+AT P V++L+ ++NNP+ + +G+ D+ A + I Sbjct: 274 EDIKNIIRETDASKRQTLMFTATWPKEVRELASTFMNNPIKVS-IGNTDQLTANKRITQI 332 Query: 176 AIPLTTTSKRTILSDLITVYAKGGK----TIVFTRTKRDADEVSLALT-TSIASEALHGD 340 + K L +L+ Y G K ++F K++A V L A+HGD Sbjct: 333 VEVVDPRGKERKLLELLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGD 392 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR + LN F+ GK +L+ATDVA+RGLDIPN +I+ P Sbjct: 393 LSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFP 437
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 94.0 bits (232), Expect = 2e-19 Identities = 56/148 (37%), Positives = 92/148 (62%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+++FSAT P ++ L+R +L+N L++ VG E + + I + + K++ L Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRI----LYVDDMDKKSAL 402 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQGK 391 DL++ KG T++F TKR AD+++ + + + A+HGD +Q +RER L+ F+ Sbjct: 403 LDLLSAEHKG-LTLIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANV 461 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDIPN +I+Y+LP Sbjct: 462 ADILVATAVAARGLDIPNVTHVINYDLP 489
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 93.2 bits (230), Expect = 3e-19 Identities = 54/159 (33%), Positives = 95/159 (59%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+R YLN+P+ + +G + + I + Sbjct: 295 IRKIVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVT-IGSLELAASHTITQLVEVI 353 Query: 188 TTTSKRTILSDLI--TVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 SKR L + + K K +VF TKR DE++ L + + A+HGD Q++R Sbjct: 354 DEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNER 413 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + L+ FR+GK +++VATDVA+RG+D+ +I+Y++P Sbjct: 414 DWVLDEFRKGKTSIMVATDVAARGIDVKGITHVINYDMP 452
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 92.8 bits (229), Expect = 4e-19 Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+++FSAT PS ++ L+ +L + L++ VG E + + I + + K L Sbjct: 352 RQTLMFSATFPSEIQHLASDFLKDYVFLSVGRVGSTSENITQKI----LYVEDFDKNDTL 407 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ + G T++F TKR AD ++ + + A+HGD +Q +RER L+ F+ G+ Sbjct: 408 LDLLAA-SNEGLTLIFVETKRAADSLTDFLIMEGFKATAIHGDRTQGERERALSAFKTGR 466 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 T+LVAT VA+RGLDIPN +I+++LP Sbjct: 467 ATILVATAVAARGLDIPNVTHVINFDLP 494
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 92.8 bits (229), Expect = 4e-19 Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 417 RQTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEMDKRSFL 472 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ K T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 473 LDLLNATGKDSLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 532 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 533 SPILVATAVAARGLDISNVKHVINFDLP 560
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 92.8 bits (229), Expect = 4e-19 Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTI 211 ERQ+++FSAT P ++ L+R +L + L++ VG E + + ++ + K + Sbjct: 353 ERQTLMFSATFPRNIQMLARDFLKDYIFLSVGRVGSTSENITQKVEY----VEDGDKISA 408 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQG 388 L D+++ KG T+VF TKR AD + L + + ++HGD SQ RER L FR G Sbjct: 409 LLDILSAAGKG-LTLVFVETKRGADYLCDVLQSEDFPATSIHGDRSQRDRERALEMFRDG 467 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDIPN +++Y+LP Sbjct: 468 TTPILVATAVAARGLDIPNVTHVVNYDLP 496
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 92.8 bits (229), Expect = 4e-19 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P ER+++LFSATM S V+KL R L+ P+ + V + + I+ + Sbjct: 210 IDKILKIIPHERRTLLFSATMTSKVEKLQRASLHQPVRV-AVSSKFSTVDTLIQRYLF-F 267 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K T L L+ A G I+F RT D +++ L T ++ LHG +SQ R Sbjct: 268 PFKHKDTYLVYLVNELA-GNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLG 326 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LN F+ G + LVATDVA+RGLDIP D++I+Y++P Sbjct: 327 ALNKFKSGARSTLVATDVAARGLDIPLVDVVINYDIP 363
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 92.8 bits (229), Expect = 4e-19 Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + + KR+ L Sbjct: 375 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEESDKRSFL 430 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ K T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 431 LDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 490 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 491 SPILVATAVAARGLDISNVKHVINFDLP 518
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 92.4 bits (228), Expect = 5e-19 Identities = 53/159 (33%), Positives = 94/159 (59%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P VK+L+ YL++P+ + +G + + I L Sbjct: 281 IRKIVDQIRPDRQTLMWSATWPKEVKQLASDYLHDPIQVQ-IGSLELSASHTITQIVEVL 339 Query: 188 TTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 T KR L+ + ++ K I+F TKR DE++ L T + A+HGD +Q++R Sbjct: 340 TDFEKRDRLAKHLETASQDQDSKIIIFASTKRTCDEITSYLRTEGWPALAIHGDKAQNER 399 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + L FR G+ ++VATDVA+RG+D+ + +I+Y++P Sbjct: 400 DWVLAEFRSGRSPIMVATDVAARGIDVKGINYVINYDMP 438
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 92.4 bits (228), Expect = 5e-19 Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +DVET++ +LP Q+ LFSATMP ++++++R++N+P + + + + A I Sbjct: 167 DDVETVMAELPENHQTALFSATMPEPIRRITKRFMNDPQEVKIKVNNEN--APDIDQSCW 224 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDA-DEVSLALTTSIASEALHGDISQHQR 358 + K L + V I+F RTK D L S AL+GD++Q R Sbjct: 225 YVHGVRKNEALLRFLEV-EDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLR 283 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 E+TL+ R G ++VATDVA+RG+DI L+++Y++P Sbjct: 284 EQTLDRLRNGSLDIVVATDVAARGIDIERISLVVNYDIP 322
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 92.4 bits (228), Expect = 5e-19 Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+ YL + + ++ +G + + I Sbjct: 284 IRKIVDQIRPDRQTLMWSATWPKEVQRLAHDYLKDQIQVN-IGSLELSASHNITQVVEVC 342 Query: 188 TTTSKRT-ILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 T KR ++ L TV K K ++FT TKR AD+++ L + A+HGD Q +R Sbjct: 343 TEYEKRDRLVKHLETVMENKESKCLIFTGTKRVADDITKFLRQDGWPALAIHGDKQQQER 402 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN FRQGK ++VATDVASRG+D+ + +I+Y+ P Sbjct: 403 DWVLNEFRQGKSPIMVATDVASRGIDVKGINFVINYDYP 441
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 92.4 bits (228), Expect = 5e-19 Identities = 56/164 (34%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQ--DEKLAEGIKL 172 +D++ I+ +P ++RQ+++F+AT P V+ L+ ++ +P+T+ + GD D + IK Sbjct: 238 QDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQ 297 Query: 173 FAIPLTTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTTSIASEA-LHGDI 343 + K L ++ + +G K + F K++A V L T A +HGD+ Sbjct: 298 VVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDL 357 Query: 344 SQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 SQ +R R+L F+ G TVLVATDVA+RGLDIP+ L+++ P Sbjct: 358 SQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVVNVTFP 401
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 92.4 bits (228), Expect = 5e-19 Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P VK+L+ +L N + I+ +G + I+ Sbjct: 449 IRKIVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQIN-IGSLELSANHNIRQVVDVC 507 Query: 188 TTTSK----RTILSDLITVYAKGGKTIVFTRTKRDADE-VSLALTTSIASEALHGDISQH 352 SK +T+LSD+ GK I+F TKR D V + + A+HGD SQ Sbjct: 508 DEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQS 567 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R+ L FR GK +LVATDVA+RGLD+ +I+++ P Sbjct: 568 ERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYP 608
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 92.0 bits (227), Expect = 7e-19 Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 375 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEIDKRSFL 430 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ K T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 431 LDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 490 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 491 SPILVATAVAARGLDISNVKHVINFDLP 518
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 90.9 bits (224), Expect = 2e-18 Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 375 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEELDKRSFL 430 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ K T+VF TK+ AD + + A ++HGD SQ RE L+ FR G+ Sbjct: 431 LDLLNATGKDSLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGR 490 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 491 KPILVATAVAARGLDISNVKHVINFDLP 518
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 90.9 bits (224), Expect = 2e-18 Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ IL +P RQ+MLFSATM V KL R LN P + L+ D + + + + Sbjct: 467 DELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRP--VRLMVDSKKNTSMNLIQEFV 524 Query: 182 PLTTTSKRTILSDLITVYAK--GGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQH 352 L + L L+ + + G+ IVF R K++A V +A + + LHG +SQ Sbjct: 525 RLRPGREDKRLGYLLHLCKEVYTGRVIVFFRQKKEAHRVRIAFGLLGLKAAELHGSMSQE 584 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR R++ FR+GK + L+ATD+A+RGLDI + +I+YE P Sbjct: 585 QRIRSVENFREGKVSFLLATDLAARGLDIKGVETVINYEAP 625
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 90.9 bits (224), Expect = 2e-18 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P Q+ LFSATMP +++++RR++ P + I Sbjct: 167 EDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEV-----------------RI 209 Query: 182 PLTTTSKRTILSDLITVYAKG--------------GKTIVFTRTKRDADEVSLAL-TTSI 316 + T++ I TV+ I+F RTK EV+ AL Sbjct: 210 QSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGY 269 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ L+++Y++P Sbjct: 270 NSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 90.9 bits (224), Expect = 2e-18 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P Q+ LFSATMP +++++RR++ P + I Sbjct: 167 EDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEV-----------------RI 209 Query: 182 PLTTTSKRTILSDLITVYAKG--------------GKTIVFTRTKRDADEVSLAL-TTSI 316 + T++ I TV+ I+F RTK EV+ AL Sbjct: 210 QSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGY 269 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ L+++Y++P Sbjct: 270 NSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 90.9 bits (224), Expect = 2e-18 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P Q+ LFSATMP +++++RR++ P + I Sbjct: 167 EDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEV-----------------RI 209 Query: 182 PLTTTSKRTILSDLITVYAKG--------------GKTIVFTRTKRDADEVSLAL-TTSI 316 + T++ I TV+ I+F RTK EV+ AL Sbjct: 210 QSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGY 269 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ L+++Y++P Sbjct: 270 NSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 90.9 bits (224), Expect = 2e-18 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P Q+ LFSATMP +++++RR++ P + I Sbjct: 167 EDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEV-----------------RI 209 Query: 182 PLTTTSKRTILSDLITVYAKG--------------GKTIVFTRTKRDADEVSLAL-TTSI 316 + T++ I TV+ I+F RTK EV+ AL Sbjct: 210 QSSVTTRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGY 269 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+TL + G+ +L+ATDVA+RGLD+ L+++Y++P Sbjct: 270 NSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 90.9 bits (224), Expect = 2e-18 Identities = 51/159 (32%), Positives = 91/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+R YLN+P+ + +G + + I + Sbjct: 278 IRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLNDPIQVQ-IGSLELAASHNITQLVEVV 336 Query: 188 TTTSKRTILSDLITVYA--KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR L + + K K ++F TKR DE++ L + A+HGD Q +R Sbjct: 337 SEFEKRDRLVKHLDTASQDKESKILIFASTKRTCDEITSYLRQDGWPALAIHGDKDQRER 396 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN FR G ++VATDVA+RG+D+ + +++Y++P Sbjct: 397 DWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMP 435
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 90.9 bits (224), Expect = 2e-18 Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P VK+L+ YLN+P+ + VG + + I + Sbjct: 281 IRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQ-VGSLELSASHNITQIVEVV 339 Query: 188 TTTSKRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR L+ + ++ KT++F TKR D+++ L + A+HGD Q +R Sbjct: 340 SDFEKRDRLNKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRER 399 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + L FR G+ ++VATDVA+RG+D+ + +I+Y++P Sbjct: 400 DWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMP 438
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 90.5 bits (223), Expect = 2e-18 Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ IL +P RQ+MLFSATM V KL R LN P + L+ D + + + + Sbjct: 475 DELNEILTTIPKSRQTMLFSATMTDSVDKLIRVGLNRP--VRLMVDSKKNTSMNLTQEFV 532 Query: 182 PLTTTSKRTILSDLITVYAK--GGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQH 352 L + L L+ + + G+ IVF R KR+A V + + + LHG +SQ Sbjct: 533 RLRPGREDKRLGYLLYLCNEIYTGRVIVFFRQKREAHRVRIVFGLLGLKAAELHGSMSQE 592 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR +++ FR+GK L+ATD+ASRGLDI + +I+YE P Sbjct: 593 QRIKSVENFREGKVAFLLATDLASRGLDIKGVETVINYEAP 633
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 90.1 bits (222), Expect = 3e-18 Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 375 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEEADKRSFL 430 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ K +VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 431 LDLLNATGKDSLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 490 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 491 SPILVATAVAARGLDISNVKHVINFDLP 518
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 90.1 bits (222), Expect = 3e-18 Identities = 57/165 (34%), Positives = 94/165 (56%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLPA-ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++ I++Q + RQ+++F+AT P V++L+ +++ P+ + +G++DE A + I Sbjct: 255 EDIKKIIRQTRSTSRQTLMFTATWPKEVRELASSFMSEPVKVS-IGNRDELSANKRITQI 313 Query: 176 AIPLTTTSKRTILSDLITVY----AKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGD 340 + K L +L+ Y K K ++F K++A V L A+HGD Sbjct: 314 VEVVDPFRKEKKLLELLKKYHSGPTKNDKVLIFALYKKEASRVERNLKYNGYDVAAIHGD 373 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR + LN F+ GK +L+ATDVA+RGLDIPN +I+ P Sbjct: 374 LSQQQRTQALNEFKAGKCNLLLATDVAARGLDIPNVKTVINLTFP 418
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 90.1 bits (222), Expect = 3e-18 Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I Q LP Q +L SATMP V +++ +++ P+ I + +DE EGIK F I Sbjct: 213 EQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMREPVRI--LVKKDELTLEGIKQFYI 270 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + K LSDL + ++F T+R D ++ LT A+HGD+ Q Q Sbjct: 271 AVEKEEWKLDTLSDLYETVTIT-QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQ 329 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ATD+ +RG+D+ L+I+Y+LP Sbjct: 330 RDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLP 369
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 90.1 bits (222), Expect = 3e-18 Identities = 58/157 (36%), Positives = 92/157 (58%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ +P ER + LFSATM + V KL R LN P+ ++ V + ++ ++ + + L Sbjct: 202 IDKILKVIPKERNTYLFSATMTTKVAKLQRASLNKPVRVE-VSSKYSTVSTLLQHYLL-L 259 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 +K L L + ++FTRT D+ +S+ L + LHG ++Q R Sbjct: 260 PLKNKDAYLLYLANELSSSSM-MIFTRTVADSQRLSIILRRLGFPAIPLHGQMTQSLRLA 318 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ G ++LVATDVASRGLDIP DL+I+Y++P Sbjct: 319 SLNKFKSGGRSILVATDVASRGLDIPLVDLVINYDMP 355
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 89.7 bits (221), Expect = 3e-18 Identities = 55/148 (37%), Positives = 83/148 (56%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 374 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFL 429 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 DL+ + T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 430 LDLLGATGRDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 489 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 490 SPILVATAVAARGLDISNVRHVINFDLP 517
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 89.7 bits (221), Expect = 3e-18 Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 9/167 (5%) Frame = +2 Query: 2 EDVETILQQLP-----AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI 166 +D+ I+ P RQ++ FSAT P V+ L+ +L +P+ I + D+ Sbjct: 328 QDIRNIISHTPDPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNIT 387 Query: 167 KLFAIPLTTTSKRTILSDLITVYAKGG----KTIVFTRTKRDADEVSLALTTSIASEALH 334 ++ I SK +L +L+ + G K ++F K++A V L +H Sbjct: 388 QIVEILDDPRSKERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARKYNVVGIH 447 Query: 335 GDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 GD+SQ R + LN F+ GK VLVATDVA+RGLDIP L+I+ P Sbjct: 448 GDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFP 494
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 89.4 bits (220), Expect = 4e-18 Identities = 56/173 (32%), Positives = 87/173 (50%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 EDVETI+ Q+P Q+ LFSATMP +++++RR++ P + I Sbjct: 167 EDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEV-----------------RI 209 Query: 182 PLTTTSKRTILSDLITVYAKG--------------GKTIVFTRTKRDADEVSLAL-TTSI 316 + T++ I T Y I+F RTK EV+ AL Sbjct: 210 QSSVTTRPDISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGY 269 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 S AL+GD++Q RE+ L + G+ +L+ATDVA+RGLD+ L+++Y++P Sbjct: 270 NSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 89.4 bits (220), Expect = 4e-18 Identities = 56/158 (35%), Positives = 89/158 (56%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 +++ IL+ +P ER++ LFSATM V KL R L +P + + K + +K I Sbjct: 207 ELDKILKVIPRERRTYLFSATMTKKVSKLERASLRDPARVSV--SSRYKTVDNLKQHYIF 264 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRE 361 + K T L L+ +A G IVF T ++++ L + + LHG +SQ +R Sbjct: 265 VPNKYKETYLVYLLNEHA-GNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRL 323 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ +LV TDVA+RGLDIP+ D++I+Y++P Sbjct: 324 GSLNKFKSKAREILVCTDVAARGLDIPHVDMVINYDMP 361
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 89.0 bits (219), Expect = 6e-18 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I Q LP Q +L SATMP V +++ +++ +P+ I LV Q+ L EGIK F I Sbjct: 209 EQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-EGIKQFYI 266 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + K LSDL + ++F T+R D ++ LT A+HGD+ Q Q Sbjct: 267 AVEKEEWKLDTLSDLYETVTIT-QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQ 325 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ATD+ +RG+D+ L+I+Y+LP Sbjct: 326 RDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLP 365
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 89.0 bits (219), Expect = 6e-18 Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 8/166 (4%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQ--DEKLAEGIKL 172 +D++ I++ P + RQ+++F+AT P V+ L+ ++ + +T+ + GD D + IK Sbjct: 251 QDIKDIIRSTPDSTRQTVMFTATWPPSVRDLAASFMTSAVTVTIGGDPSADPRANTRIKQ 310 Query: 173 FAIPLTTTSKRTILSDLITVYAKGG----KTIVFTRTKRDADEVSLALTTSIASEA-LHG 337 + K L L++ +G K +VF K++A V L + A +HG Sbjct: 311 VVEVVKPQEKEARLVQLLSRSQRGAAVGDKVLVFCLYKKEAVRVERLLRSKNFKVAGIHG 370 Query: 338 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 D++QH+R ++L F+ G TVLVATDVA+RGLDIP+ L+I+ P Sbjct: 371 DLNQHERFKSLEAFKTGSATVLVATDVAARGLDIPSVKLVINVTFP 416
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 89.0 bits (219), Expect = 6e-18 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + + + +P + Q +L SATMPS V ++ R++ NP+ I + +DE EGI+ F I Sbjct: 190 DQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRI--LVKKDELTLEGIRQFYI 247 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQ 355 + K L DL V + ++F T+R D ++ +T + LHGD+ Q + Sbjct: 248 NVQKDEWKFDCLCDLYNV-VNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAE 306 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 307 RDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLP 346
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 89.0 bits (219), Expect = 6e-18 Identities = 56/166 (33%), Positives = 96/166 (57%), Gaps = 8/166 (4%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQ--DEKLAEGIKL 172 +D++ I++ +P ++RQ+++F+AT P V+ L+ ++++P+T+ + GD D + IK Sbjct: 246 QDIKDIIRPMPVSKRQTIMFTATWPPSVRDLASTFMSSPVTVTIGGDPSADPRANTRIKQ 305 Query: 173 FAIPLTTTSKRTILSDLITVYAKG----GKTIVFTRTKRDADEVSLALTTSIASEA-LHG 337 + K + L L+ +G K + F K++A + L T A +HG Sbjct: 306 VVEVVKPHEKESRLVQLLNRSQRGVPEPEKVLAFCLYKKEAMRIERLLRTKGFKVAGIHG 365 Query: 338 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 D+SQ +R R+L+ F+ G TVLVATDVA+RGLDIP+ +I+ P Sbjct: 366 DLSQQERFRSLDAFKTGAATVLVATDVAARGLDIPSVKQVINVTFP 411
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 88.6 bits (218), Expect = 8e-18 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I Q LP Q +L SATMP V +++ +++ +P+ I LV Q+ L EGIK F I Sbjct: 186 EQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-EGIKQFYI 243 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + K LSDL + ++F T+R D ++ LT A+HGD+ Q Q Sbjct: 244 AVEKEEWKLDTLSDLYETVTIT-QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQ 302 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ATD+ +RG+D+ L+I+Y+LP Sbjct: 303 RDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLP 342
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 88.6 bits (218), Expect = 8e-18 Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 2/155 (1%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 + Q LP + Q +L SATMP V +++++++ +P+ I + +DE EGIK F + + Sbjct: 204 VFQLLPQDTQCVLLSATMPQEVLEVTKKFMRDPIRI--LVKRDELTLEGIKQFYVAVEKE 261 Query: 197 S-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTL 370 K L DL + ++F T+R D ++ LT+ A+HGD+ Q QRE + Sbjct: 262 DWKLDTLCDLYETVTIT-QAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIM 320 Query: 371 NGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 321 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 355
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 88.6 bits (218), Expect = 8e-18 Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDL--VGDQDEKLAEGIKLF 175 EDV TI +RQ++LFSATMP ++ +R L P+TI++ G + + ++ Sbjct: 352 EDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAGAASMNVTQQVEY- 410 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQH 352 + +K L D + A ++F K+D D + L + + A+HG Q Sbjct: 411 ---VKQEAKVVYLLDCLQKTAP--PVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQE 465 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R R ++ +R GK VLVATDVAS+GLD PN +I+Y++P Sbjct: 466 ERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYDMP 506
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 88.6 bits (218), Expect = 8e-18 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I Q LP Q +L SATMP V +++ +++ +P+ I LV Q+ L EGIK F I Sbjct: 209 EQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRI-LVKKQELTL-EGIKQFYI 266 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + K LSDL + ++F T+R D ++ LT A+HGD+ Q Q Sbjct: 267 AVEKEEWKLDTLSDLYETVTIT-QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQ 325 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ATD+ +RG+D+ L+I+Y+LP Sbjct: 326 RDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLP 365
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 88.2 bits (217), Expect = 1e-17 Identities = 55/156 (35%), Positives = 92/156 (58%), Gaps = 1/156 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ +++ PA RQ++LFSAT P + +S R +PL I++ D + L + F Sbjct: 167 IDDVIRFAPASRQTLLFSATWPEAIAAISGRVQRDPLAIEI--DSTDALPPIEQQF-YET 223 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 ++ K +L L++++ + +VF TK+D V AL ++ +LHGD+ Q R++ Sbjct: 224 SSKGKIPLLQRLLSLH-QPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQ 282 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 TL F G VLVATDVA+RGLDI + +L++++EL Sbjct: 283 TLVRFANGSARVLVATDVAARGLDIKSLELVVNFEL 318
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 88.2 bits (217), Expect = 1e-17 Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 374 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFL 429 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 D++ T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 430 LDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 489 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 490 SPILVATAVAARGLDISNVRHVINFDLP 517
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 87.8 bits (216), Expect = 1e-17 Identities = 58/163 (35%), Positives = 87/163 (53%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ I+Q P RQ+MLFSATM V L R LN P+ + + D K L Sbjct: 424 DELNEIIQACPKSRQTMLFSATMTDKVDDLIRLSLNRPVRVFV----DNKKTTAKLLTQE 479 Query: 182 PLTTTSKRTILSDLITVYAKGG----KTIVFTRTKRDADEVSLAL-TTSIASEALHGDIS 346 + +R +L + +Y +TI+F R+K A ++ + S+ + +HG +S Sbjct: 480 FVRVRPQRELLRPAMLIYLCKELFHRRTIIFFRSKAFAHKMRVIFGLLSLNATEIHGSLS 539 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q QR R L FR GK L+ATDVASRG+DI +++I+YE P Sbjct: 540 QEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAP 582
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 87.8 bits (216), Expect = 1e-17 Identities = 54/159 (33%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ+ ++SAT P V++L+ +LNN + ++ +G D I + Sbjct: 308 IRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNNYIQVN-IGSMDLSANHRITQIVEVI 366 Query: 188 TTTSKRT-ILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR ++ L + +G K +VFT TKR ADE++ L + ++HGD Q +R Sbjct: 367 SEFEKRDRMIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQER 426 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ GK ++VATDVASRG+D+ + +I+Y+ P Sbjct: 427 DWVLNEFKTGKSPIMVATDVASRGIDVRDITHVINYDYP 465
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 87.8 bits (216), Expect = 1e-17 Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 R +M+FSAT P ++ L+R +L+ L + VG E + + + + + KR+ L Sbjct: 374 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKV----VWVEDLDKRSFL 429 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 D++ T+VF TK+ AD + L A ++HGD SQ RE L+ FR GK Sbjct: 430 LDILGAAGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGK 489 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +LVAT VA+RGLDI N +I+++LP Sbjct: 490 SPILVATAVAARGLDISNVRHVINFDLP 517
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 87.4 bits (215), Expect = 2e-17 Identities = 52/158 (32%), Positives = 92/158 (58%), Gaps = 2/158 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++LFSAT P V++L+ +L++ + ++ +G D + Sbjct: 278 IRKIVSQIRPDRQTLLFSATWPKEVQRLAMDFLHDFIQVN-IGSLDLTANHNVAQHVEVC 336 Query: 188 TTTSKRT-ILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 T KR+ +LS L + + GK ++F TKR AD+++ L + A+HGD Q +R+ Sbjct: 337 TDFDKRSKLLSHLEKISQENGKVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERD 396 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L F+ G+ +++ATDVASRGLD+ + +I+Y+ P Sbjct: 397 WVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFP 434
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 87.4 bits (215), Expect = 2e-17 Identities = 57/163 (34%), Positives = 92/163 (56%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPL--TIDLVGDQDEKLAEGIK 169 ED+ I+ + E Q+++FSAT P +++++ +L N + I +VG +K Sbjct: 411 EDMRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGA----CSDVK 466 Query: 170 LFAIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDIS 346 + +KR+ L ++++ A G TIVF TKR AD ++ L+ + ++HGD Sbjct: 467 QTIYEVNKYAKRSKLIEILSEQADG--TIVFVETKRGADFLASFLSEKEFPTTSIHGDRL 524 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q QRE+ L F+ G VL+AT VASRGLDI N +I+Y++P Sbjct: 525 QSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMP 567
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 87.4 bits (215), Expect = 2e-17 Identities = 50/159 (31%), Positives = 92/159 (57%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I + LP + Q LFSATMP V +L+++++ +P+ I + ++ EGIK F I Sbjct: 190 DQIYEIFRFLPKDIQVALFSATMPEEVLELTKKFMRDPVRI--LVKRESLTLEGIKQFFI 247 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQR 358 + K L DL + ++++F T+R D ++ L S + ++H ++ + R Sbjct: 248 AVEEEHKLDTLMDLYETVSIA-QSVIFANTRRKVDWIAEKLNQSNHTVSSMHAEMPKSDR 306 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 ER +N FR G VLV TD+ +RG+D+ + +++I+++LP Sbjct: 307 ERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFDLP 345
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 87.0 bits (214), Expect = 2e-17 Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 1/154 (0%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 IL + +RQ+++ SAT P V +L++ YL P+ + VG D +K I T Sbjct: 413 ILLDVRPDRQTVMTSATWPHSVHRLAQSYLKEPMIV-YVGTLDLVAVSSVKQNIIVTTEE 471 Query: 197 SKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLN 373 K + + + + K IVF K AD +S L +I+ E+LHGD Q RE+ L Sbjct: 472 EKWSHMQTFLQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALE 531 Query: 374 GFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F+ GK +L+ATD+ASRGLD+ + + +++ P Sbjct: 532 NFKTGKVRILIATDLASRGLDVHDVTHVYNFDFP 565
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 87.0 bits (214), Expect = 2e-17 Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 13/169 (7%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL +LP+ RQ++LFSAT+PS V + ++ L NPL + L D ++K++ + L + Sbjct: 217 LQEILHRLPSTRQNLLFSATLPSSVAEFAKAGLVNPLLVRL--DAEQKISPDLALKFFSV 274 Query: 188 TTTSKRTILSDLITVY------------AKGGKTIVFTRTKRDADEVS-LALTTSIASEA 328 K L L+ + + IVF TK D V+ L TT + Sbjct: 275 KPGEKEASLLVLLREVIGKPNQPEPADPSSAPQAIVFVATKHHVDYVAELLRTTGYRTSL 334 Query: 329 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 ++ + Q R++ L GFR + VLV TDVA+RGLDIP D +I+Y+ P Sbjct: 335 IYSSLDQVARQQQLAGFRSHQSDVLVVTDVAARGLDIPIMDHVINYDFP 383
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 86.7 bits (213), Expect = 3e-17 Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 V I++Q P +ERQ++LFSAT V L++++ NP +++ + + +E ++ Sbjct: 180 VRQIIRQTPPKSERQTLLFSATFTDDVMNLAKQWTTNPAIVEI--EPENVASETVEQHVY 237 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + + K +L +L+T K + +VF K + + L I + L GD+ QH+R Sbjct: 238 AVAGSDKYKLLYNLVT-QNKWERVMVFANRKDEVRRIEEKLVRDGINAAQLSGDVPQHKR 296 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RTL FR+G+ TVLVATDVA RG+ I +I++ LP Sbjct: 297 IRTLESFREGRITVLVATDVAGRGIHIDGISHVINFTLP 335
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 86.7 bits (213), Expect = 3e-17 Identities = 50/160 (31%), Positives = 93/160 (58%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + ++ + + LP + Q +L SATMP V ++SR ++ +P++I + ++E EGIK F + Sbjct: 191 DQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSI--LVKKEELTLEGIKQFYV 248 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + + K L DL + ++++F T+R D+++ ++ + A+HGD+ Q Sbjct: 249 NVKQENWKLGTLCDLYDTLSIT-QSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRD 307 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 308 REVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 347
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 86.3 bits (212), Expect = 4e-17 Identities = 53/158 (33%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 +V+ IL+ +P +R++ LFSATM V+KL R L NP+ + + E ++ + I Sbjct: 187 EVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYIF 244 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRE 361 + + K T L ++ A G ++F T + +L L + LHG +SQ +R Sbjct: 245 IPSKFKDTYLVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 303 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ ++L+ATDVASRGLDIP+ D+++++++P Sbjct: 304 GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIP 341
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 86.3 bits (212), Expect = 4e-17 Identities = 52/147 (35%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+++ATMP ++KL+++YL P +TI G + + ++ T ++ L Sbjct: 365 RQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLN---TDEKRKRRL 421 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEAL-HGDISQHQRERTLNGFRQGK 391 D+I+ +VF KRD + VS AL + A+ HG Q QRE+ + ++G Sbjct: 422 LDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGA 481 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYEL 472 VLVATDVA RGLDIPN L++++++ Sbjct: 482 VDVLVATDVAGRGLDIPNVSLVVNFQM 508
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 86.3 bits (212), Expect = 4e-17 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q +L SAT+P + +++ +++ +P+ I + +DE EGIK F + Sbjct: 199 EQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI--LVKRDELTLEGIKQFFV 256 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F TKR D ++ + + ++HGD+ Q + Sbjct: 257 AVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKE 315 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL++TDV +RGLD+P LII+Y+LP Sbjct: 316 RESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP 355
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 86.3 bits (212), Expect = 4e-17 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q +L SAT+P + +++ +++ +P+ I + +DE EGIK F + Sbjct: 199 EQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI--LVKRDELTLEGIKQFFV 256 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F TKR D ++ + + ++HGD+ Q + Sbjct: 257 AVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKE 315 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL++TDV +RGLD+P LII+Y+LP Sbjct: 316 RESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP 355
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 86.3 bits (212), Expect = 4e-17 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q +L SAT+P + +++ +++ +P+ I + +DE EGIK F + Sbjct: 199 EQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI--LVKRDELTLEGIKQFFV 256 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F TKR D ++ + + ++HGD+ Q + Sbjct: 257 AVEREEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKE 315 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL++TDV +RGLD+P LII+Y+LP Sbjct: 316 RESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLP 355
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 85.9 bits (211), Expect = 5e-17 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I LP Q++L SATMP+ V ++ +++ +P+ I + +DE EGIK F I Sbjct: 183 DPIYDIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRI--LVKKDELTLEGIKQFYI 240 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQ 355 + S K +L DL + ++F T+R D ++ ALT + ++HG+ Q Q Sbjct: 241 DVEQESYKFEVLCDLYETI-NVSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQ 299 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G +L+ TD+ +RG+D+ L+I+++LP Sbjct: 300 RDVIMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLP 339
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 85.9 bits (211), Expect = 5e-17 Identities = 48/147 (32%), Positives = 86/147 (58%), Gaps = 3/147 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+++ATMPS V++++R+YL P +TI G+ + + + +++ A ++ L Sbjct: 568 RQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIA---GEDKRKKRL 624 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQGK 391 +D+++ IVF KR+ D ++ + +S LHG +Q QRE L R G Sbjct: 625 ADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGS 684 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYEL 472 VLVATD+A RG+D+P+ L++++ + Sbjct: 685 TDVLVATDLAGRGIDVPDVSLVVNFNM 711
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 85.5 bits (210), Expect = 6e-17 Identities = 52/158 (32%), Positives = 91/158 (57%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 +V+ IL+ +P +R++ LFSATM V+KL R L NP+ + + E ++ + + Sbjct: 187 EVDKILKVIPRDRKTFLFSATMTKKVQKLQRAALKNPVKCAV--SSKYQTVEKLQQYYLF 244 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRE 361 + + K T L ++ A G ++F T + +L L + LHG +SQ +R Sbjct: 245 IPSKFKDTYLVYILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRL 303 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +LN F+ ++L+ATDVASRGLDIP+ D+++++++P Sbjct: 304 GSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIP 341
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 85.5 bits (210), Expect = 6e-17 Identities = 54/165 (32%), Positives = 93/165 (56%), Gaps = 7/165 (4%) Frame = +2 Query: 2 EDVETILQQLPAE-RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLF 175 ED++ I+++ ++ RQ+++F+AT P V++L+ ++ P+ + +G++DE A + I Sbjct: 286 EDIKRIIKETKSDVRQTLMFTATWPKEVRELASTFMRAPVKVS-IGNRDELSANKRITQV 344 Query: 176 AIPLTTTSKRTILSDLITVYAKGGK----TIVFTRTKRDADEVSLALT-TSIASEALHGD 340 + K L +L+ Y G K ++F K++A V L A+HGD Sbjct: 345 VEVIDPFKKEKRLLELLKQYQSGAKKNDKVLIFALYKKEASRVERNLKYNGYNVAAIHGD 404 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +SQ QR + L+ F+ G +L+ATDVA+RGLDIPN +I+ P Sbjct: 405 LSQQQRTQALSEFKAGTANLLLATDVAARGLDIPNVKTVINLTFP 449
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 85.1 bits (209), Expect = 8e-17 Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ IL+ LP ER++ LFSATM S V+ L R L NPL + + + + ++ ++ I + Sbjct: 216 LDKILKVLPRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVST-LQQSYIFI 274 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 K L L+ + G I+F RT + +S L + LHG +SQ R Sbjct: 275 PHKHKDLYLVYLLNEFV-GQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLG 333 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L FR +LVATDVA+RGLDIP+ D++++++LP Sbjct: 334 ALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLP 370
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 85.1 bits (209), Expect = 8e-17 Identities = 47/157 (29%), Positives = 84/157 (53%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + IL + +RQ+++ SAT P V++L+ YL +P+ + VG+ + +K I Sbjct: 390 IRKILLDVRPDRQTVMTSATWPDTVRQLALSYLKDPMIV-YVGNLNLVAVNTVKQNIIVT 448 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRER 364 T KR + + + + K I+F K AD++S I++E+LHG+ Q +ER Sbjct: 449 TEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQER 508 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + F+ G +L+ TD+ SRGLD+ + + +Y+ P Sbjct: 509 AVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYDFP 545
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 85.1 bits (209), Expect = 8e-17 Identities = 53/160 (33%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP ++R+++N P+ I + +DE EGIK F + Sbjct: 201 DQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVRI--LVKRDELTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + T + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 84.7 bits (208), Expect = 1e-16 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +DVE IL +++ +LFSATMP + L+++Y+ + I K+ I+ + Sbjct: 166 KDVEKILNACNKDKRILLFSATMPREILNLAKKYMGDYSFIKA------KINANIEQSYV 219 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQR 358 + + L L+ G +VF +TKRD E+ S+ + A+HGD+SQ QR Sbjct: 220 EVNENERFEALCRLLKNKEFYG--LVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQR 277 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 E+ + F+Q K +L+ATDV SRG+D+ + + +I+Y LP Sbjct: 278 EKVIRLFKQKKIRILIATDVMSRGIDVNDLNCVINYHLP 316
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 84.7 bits (208), Expect = 1e-16 Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP Q +L SATMP V +++ +++ +P+ I + +DE EGIK F + Sbjct: 180 DQIYDIFQLLPPTAQVVLLSATMPQDVLEVTTKFMRDPIRI--LVKKDELTLEGIKQFYV 237 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ LT ++HGD+ Q Q Sbjct: 238 AVEKEEWKLDTLCDLYETVTVT-QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQ 296 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ ++ FR G +L+ TD+ +RG+D+ L+I+Y+LP Sbjct: 297 RDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLP 336
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 84.7 bits (208), Expect = 1e-16 Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V+ L+R YLN+P+ + VG + + I + Sbjct: 273 IRKIVDQIRPDRQTLMWSATWPKEVQALTRDYLNDPIQVT-VGSLELAASHTITQLVEVV 331 Query: 188 TTTSKRT-ILSDLITVYAKG-GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 T KR ++ L T A K ++F TKR DE++ L + A+HGD Q +R Sbjct: 332 TEFEKRDRLIKHLETATADPEAKCLIFASTKRTCDEITNYLRADGWPALAIHGDKQQGER 391 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + L F+ GK ++VATDVA+RG+D+ +I+ ++P Sbjct: 392 DWVLKEFKTGKSPIMVATDVAARGIDVKGISYVINLDMP 430
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 84.3 bits (207), Expect = 1e-16 Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ+ ++SAT P V++L+ +LN+ + ++ +G D I + Sbjct: 298 IRKIISQIRPDRQTCMWSATWPKEVRQLASDFLNDYIQVN-IGSMDLSANHRITQIVEVV 356 Query: 188 TTTSKRT-ILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR ++ L + +G K ++FT TKR ADE++ L + ++HGD Q +R Sbjct: 357 SDFEKRDKMIKHLEKIMENRGNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQER 416 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ GK ++VATDVASRG+D+ + +++Y+ P Sbjct: 417 DWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 455
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 84.3 bits (207), Expect = 1e-16 Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP++ Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 198 DQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 255 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 256 NIDKEDWKLDTLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 314 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 315 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 354
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 84.3 bits (207), Expect = 1e-16 Identities = 48/147 (32%), Positives = 85/147 (57%), Gaps = 3/147 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+++ATMP+ V++++R+YL P +TI G+ + + + ++ A ++ L Sbjct: 576 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIA---GEDKRKKRL 632 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQGK 391 D+++ IVF KR+ D ++ + +S LHG +Q QRE L R G+ Sbjct: 633 GDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGQ 692 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYEL 472 VLVATD+A RG+D+P+ L+I++ + Sbjct: 693 TDVLVATDLAGRGIDVPDVSLVINFNM 719
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 84.3 bits (207), Expect = 1e-16 Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI-KLFAIP 184 + I+ Q+ +RQ++++SAT P V++L+ +L + I+ VG+ + I ++ + Sbjct: 260 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVC 318 Query: 185 LTTTSKRTILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + + ++ + + A K KTI+F TKR D+++ + + +HGD SQ +R Sbjct: 319 MESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPER 378 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN FR GK +L+ATDVASRGLD+ + +I+Y+ P Sbjct: 379 DWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP 417
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 84.3 bits (207), Expect = 1e-16 Identities = 51/159 (32%), Positives = 92/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI-KLFAIP 184 + I+ Q+ +RQ++++SAT P V++L+ +L + I+ VG+ + I ++ + Sbjct: 260 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQIN-VGNLELSANHNILQIVDVC 318 Query: 185 LTTTSKRTILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + + ++ + + A K KTI+F TKR D+++ + + +HGD SQ +R Sbjct: 319 MESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPER 378 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN FR GK +L+ATDVASRGLD+ + +I+Y+ P Sbjct: 379 DWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP 417
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 84.0 bits (206), Expect = 2e-16 Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I +LP Q ++ SATM + +++R+++N+P+ I + +DE EGIK + + Sbjct: 187 QQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKI--LVKRDEISLEGIKQYVV 244 Query: 182 PLTTTSKRTILSDLITVYAKGGKT--IVFTRTKRDADEVSLALTTS-IASEALHGDISQH 352 + + L +Y T ++F TK+ D +S L S A ++HGD+ Q Sbjct: 245 NVDKEEWK--FDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQE 302 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R++ +N FR G VL++TDV +RG+D+ L+I+Y+LP Sbjct: 303 ERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLP 343
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 84.0 bits (206), Expect = 2e-16 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILS 217 +RQ+++FSAT P +++L+ +L + VG Q ++ + + SKR L Sbjct: 474 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGGACRDVQQTVLQVGQFSKREKLV 532 Query: 218 DLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGKF 394 +++ +T+VF TK+ AD ++ L I++ ++HGD Q +RE+ L FR GK Sbjct: 533 EILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKC 591 Query: 395 TVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDI N +I+++LP Sbjct: 592 PVLVATSVAARGLDIENVQHVINFDLP 618
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 84.0 bits (206), Expect = 2e-16 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILS 217 +RQ+++FSAT P +++L+ +L + VG Q ++ + + SKR L Sbjct: 475 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGGACRDVQQTVLQVGQFSKREKLV 533 Query: 218 DLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGKF 394 +++ +T+VF TK+ AD ++ L I++ ++HGD Q +RE+ L FR GK Sbjct: 534 EILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 592 Query: 395 TVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDI N +I+++LP Sbjct: 593 PVLVATSVAARGLDIENVQHVINFDLP 619
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 83.6 bits (205), Expect = 2e-16 Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I LP Q +L SATMP V +++ +++ NP+ I + +DE EGIK F + Sbjct: 183 EQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRI--LVKKDELTLEGIKQFYV 240 Query: 182 PLTTTSKR----TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDIS 346 + + T L D I+V + ++F T+R +E++ LT + +++ D+ Sbjct: 241 NVEEEQFKYDCLTDLYDSISVT----QAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLP 296 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R+ + FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 297 QQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLP 339
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 83.6 bits (205), Expect = 2e-16 Identities = 53/147 (36%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILS 217 +RQ++LFSAT P +++L+ +L + VG Q ++ + + SKR L Sbjct: 447 QRQTLLFSATFPEEIQRLAGDFLKSSYLFVAVG-QVGGACRDVQQTILQVGQYSKREKLV 505 Query: 218 DLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGKF 394 +++ +T+VF TK+ AD ++ L I++ ++HGD Q +RE+ L FR GK Sbjct: 506 EILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 564 Query: 395 TVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDI N +I+++LP Sbjct: 565 PVLVATSVAARGLDIENVQHVINFDLP 591
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 83.6 bits (205), Expect = 2e-16 Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I Q LP E Q +L SATM V ++++++ +P+ I + +DE EGI+ F I Sbjct: 189 ESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRI--LVKKDELTLEGIRQFYI 246 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ L A+HGD+ Q + Sbjct: 247 NVEKEEWKLETLCDLYETVTIT-QAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEE 305 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 306 REVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 345
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 83.6 bits (205), Expect = 2e-16 Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ IL LP RQ+MLFSATM S V +L + LN P + +V Q + + ++ F Sbjct: 421 DELNEILTTLPKSRQTMLFSATMTSSVDRLIQIGLNRPARV-MVNSQKKTVTTLVQEFVR 479 Query: 182 --PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQH 352 P + L+ + K + I+F R K+DA + ++ LHG ++Q Sbjct: 480 LRPGREDKRMGYLAHVCKNLYKE-RVIIFFRQKKDAHRARIIFGLLGLSCAELHGSMNQT 538 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR ++ FR GK L+ATD+ASRGLDI D +I+YE P Sbjct: 539 QRISSVEDFRDGKVAYLLATDLASRGLDIKGVDTVINYEAP 579
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 83.6 bits (205), Expect = 2e-16 Identities = 55/159 (34%), Positives = 81/159 (50%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E ++ I++ LP R + LFSATM + V+ L R L+NP+ + + I Sbjct: 208 ESLDKIIRILPRTRHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVSTLQSSYICI 267 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 P K L L+ +A G I+FT T + V+ L + LHG +SQ R Sbjct: 268 P--HKHKNLYLVYLLNEFA-GQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSAR 324 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L FR +LVATDVA+RGLDIP+ D++ +++LP Sbjct: 325 LGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLP 363
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 83.6 bits (205), Expect = 2e-16 Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +D+ EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDDVTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + T + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>SUB2_DEBHA (Q6BME5) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 435 Score = 83.6 bits (205), Expect = 2e-16 Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + ++++ NPL I V D+ + G++ + I Sbjct: 218 DVQDIFRNTPHQKQVMMFSATLSQEIRPVCKKFMQNPLEI-YVDDEAKLTLHGLQQYYIK 276 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 L K LSDL+ + + I+F R+ + A+E++ L +S S A+H + Q +R Sbjct: 277 LDEKEKNRKLSDLLDSL-EFNQVIIFVRSTQRANELNKLLCSSNFPSIAVHSGLPQEERI 335 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F++ + V+TDV RG+DI +L I+Y+LP Sbjct: 336 ERYKSFKEFNKRICVSTDVFGRGIDIERINLAINYDLP 373
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 83.2 bits (204), Expect = 3e-16 Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + + + LP Q +L SAT+P V +++ +++ +P+ I + +DE EGIK F + Sbjct: 185 DQIYDVYRYLPPSTQVVLLSATLPQDVLEMTSKFMTDPVRI--LVKRDELTLEGIKQFFV 242 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D +S + + ++HG++ Q + Sbjct: 243 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKE 301 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL+ TDV +RG+DI N L+I+Y+LP Sbjct: 302 RDEVMAEFRQGSSRVLITTDVWARGIDIANISLVINYDLP 341
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 83.2 bits (204), Expect = 3e-16 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+ +L + + I+ +G + I Sbjct: 262 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVC 320 Query: 188 TTTSKRTILSDLIT--VYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 K L L+ + K KTIVF TKR DE++ + + +HGD SQ +R Sbjct: 321 HDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQER 380 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ GK +L+ATDVASRGLD+ + +I+Y+ P Sbjct: 381 DWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 83.2 bits (204), Expect = 3e-16 Identities = 53/159 (33%), Positives = 87/159 (54%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+ +L + + I+ +G + I Sbjct: 262 IRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHIN-IGALELSANHNILQIVDVC 320 Query: 188 TTTSKRTILSDLIT--VYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 K L L+ + K KTIVF TKR DE++ + + +HGD SQ +R Sbjct: 321 HDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQER 380 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ GK +L+ATDVASRGLD+ + +I+Y+ P Sbjct: 381 DWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYP 419
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 83.2 bits (204), Expect = 3e-16 Identities = 56/160 (35%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E ++ I+ +LP Q++LFSAT+P + + +R L P+ I L D D KL E +K Sbjct: 259 EQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL--DVDTKLNEQLKTSFF 316 Query: 182 PLTTTSKRTILSDLI-TVYAKGGKTIVFTRTKRDADEVSLALTTSIASEA-LHGDISQHQ 355 + +K +L L+ V +T+VF TK A+ ++ LTT S A ++ + Sbjct: 317 LVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTA 376 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ L F GK + L+ TD+A+RGLDIP D +I+Y P Sbjct: 377 RKINLAKFTLGKCSTLIVTDLAARGLDIPLLDNVINYSFP 416
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 83.2 bits (204), Expect = 3e-16 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP++ Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 202 DQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 259 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + A HGD+ Q+ Sbjct: 260 NVEKEEWKLDTLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNT 318 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 319 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 358
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 83.2 bits (204), Expect = 3e-16 Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 83.2 bits (204), Expect = 3e-16 Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>SUB2_ASPFU (Q4WCW2) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 448 Score = 83.2 bits (204), Expect = 3e-16 Identities = 50/159 (31%), Positives = 92/159 (57%), Gaps = 2/159 (1%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLFAI 181 DV+ I + PA++Q M+FSAT+ ++ + ++++ NPL + + D D KL G++ + I Sbjct: 232 DVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYV--DDDTKLTLHGLQQYYI 289 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 L+ + K L++L+ + + I+F ++ A+E+ L + S A+H +SQ +R Sbjct: 290 KLSESEKNRKLNELLDSL-EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEER 348 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + F++ + VATDV RG+DI +L I+Y+LP Sbjct: 349 IKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLP 387
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 83.2 bits (204), Expect = 3e-16 Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 1/147 (0%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILS 217 +RQ+++FSAT P +++L+ +L + VG Q ++ + + SKR L Sbjct: 472 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVG-QVGGACRDVQQADLQVGQYSKREKLL 530 Query: 218 DLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGKF 394 +++ +T+VF TK+ AD ++ L I++ ++HGD Q +RE+ L FR GK Sbjct: 531 EILRNIGDE-RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKC 589 Query: 395 TVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDI N +I+++LP Sbjct: 590 PVLVATSVAARGLDIENVQHVINFDLP 616
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 82.8 bits (203), Expect = 4e-16 Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 6/164 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I + LP Q +L SATMP V +++ +++NNP+ I + +DE EGIK F I Sbjct: 184 EQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRI--LVKKDELTLEGIKQFYI 241 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASE-----ALHGDI 343 + K L DL + + ++F T+ + LTT + E A+H D+ Sbjct: 242 NVEQEDYKFDCLCDLYDSISVT-QAVIFCNTRSKVE----FLTTKLKGENFTVSAIHADL 296 Query: 344 SQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q R+ +N FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 297 PQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVSLVINYDLP 340
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 82.8 bits (203), Expect = 4e-16 Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 20/178 (11%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 ED++ IL P +RQ+++F+AT P ++KL+ Y+ NP + +G + +G Sbjct: 352 EDIKLILSGCPPKEQRQTLMFTATWPLDIQKLAESYMINPAQVT-IGHRTRAGGDGEGNG 410 Query: 176 AIPLTTTS-------------KRTILSDLITVYAKGG----KTIVFTRTKRDADEVSLAL 304 I L S K L +L+ KG + +VF K++A V L Sbjct: 411 NIELQANSRIEQKVEVVDPRGKEFRLYELLKEAQKGSQKDDRILVFCLYKKEAVRVEQFL 470 Query: 305 TTS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + I ++HGD+ Q QR R+L F+ G TVLVATDVA+RGLDIP L+I+ P Sbjct: 471 SRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFP 528
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 82.8 bits (203), Expect = 4e-16 Identities = 50/163 (30%), Positives = 89/163 (54%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I LP Q +L SATMP+ V +++ +++ NP+ I + +DE EGIK F + Sbjct: 181 EQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRI--LVKKDELTLEGIKQFYV 238 Query: 182 PLTTTSKR----TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDIS 346 + + T L D I+V + ++F T+R +E++ L A++ D+ Sbjct: 239 NVEEEEYKYECLTDLYDSISVT----QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLP 294 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R+ + FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 295 QQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLP 337
>IF4A6_TOBAC (Q40469) Eukaryotic initiation factor 4A-6 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-6) (eIF-4A-6) (Fragment) Length = 253 Score = 82.8 bits (203), Expect = 4e-16 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 42 DQIYDIFQLLPPKIQVGIFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 99 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + A HGD+ Q+ Sbjct: 100 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNT 158 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 159 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 198
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 82.8 bits (203), Expect = 4e-16 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 202 DQIYDIFQLLPGKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 259 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + A HGD+ Q+ Sbjct: 260 NVEKEEWKLDTLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNT 318 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 319 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 358
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 82.8 bits (203), Expect = 4e-16 Identities = 50/161 (31%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI--KLF 175 +++ IL LP +RQ++LFSATM S + L + L+ P+ + + + ++ A G+ + Sbjct: 418 QELTEILTLLPKKRQTLLFSATMNSSISSLIQLSLSRPVRVMI--NPPKQAASGLVQEFV 475 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQH 352 I K +L+ ++ K +TI+F K A + + L + LHG +SQ Sbjct: 476 RIRKRDHLKPALLASILKKMDKEQRTIIFVARKETAHRLRIMLGLLGVRIGELHGALSQE 535 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR +++ F++ + +LV TD+ASRGLDIP + +++Y++P Sbjct: 536 QRLQSITAFKKLEVPILVCTDLASRGLDIPKIECVVNYDMP 576
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 82.8 bits (203), Expect = 4e-16 Identities = 54/179 (30%), Positives = 96/179 (53%), Gaps = 22/179 (12%) Frame = +2 Query: 2 EDVETILQQLPAERQ----------------SMLFSATMPSWVKKLSRRYLNNP--LTID 127 +D+ +L +LP E+Q +M+F+AT+ V+KL+++YL +P L I Sbjct: 340 KDLNKVLDKLPTEKQLSSTIDGRIFHLEKRSTMMFTATISPTVEKLTKKYLIDPGYLYIG 399 Query: 128 LVGDQDEKLAEGIKLFAIPLTTTSKRTILSDLITVY---AKGGKTIVFTRTKRDADEVSL 298 G+ + +++ + + T +K L +I + + I+F K D +S Sbjct: 400 GAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVTENPLIIIFANFKHVCDSLSQ 459 Query: 299 ALTTS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 L+++ I + +HG SQ RE+ + FR + VL+ATDVA+RG+DIPN L+I+Y++ Sbjct: 460 ELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVINYQM 518
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 82.4 bits (202), Expect = 5e-16 Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I LP Q +L SATMP V ++ +++N P+ I + +D EGI+ + I Sbjct: 183 EQIYKIFTMLPPTTQVVLLSATMPKEVLDVTDKFMNKPVRI--LVKKDALTLEGIQQYYI 240 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQ 355 + + K LSDL + + ++F T+R +E++ LT S A++ D+ Q Q Sbjct: 241 NVESEEYKYDCLSDLYDSISVT-QAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQ 299 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 300 RDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLP 339
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 82.4 bits (202), Expect = 5e-16 Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 12/169 (7%) Frame = +2 Query: 5 DVETILQQLPAE---RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQ---DEKLAEGI 166 D+ I+ P RQ+++FSAT P V++L+ +LNNPL I + D+ ++++ + + Sbjct: 349 DIRRIIAHTPGHKEGRQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQIV 408 Query: 167 KLFAIPLTTTSKRTILSDLITVYAKGGKT-----IVFTRTKRDADEVSLALTTS-IASEA 328 ++ P + T KT +VF K++A + + + A A Sbjct: 409 EVLDNPRDKDFRLTHHLKAHLKVHPNSKTSPTRILVFALYKKEAQRLEYTIRRAGYAVGA 468 Query: 329 LHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 LHGD++Q R + L F+ G+ VLVATDVA+RGLDIP+ L+I+ P Sbjct: 469 LHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVINVTFP 517
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 82.4 bits (202), Expect = 5e-16 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>SUB2_ASPOR (Q2U6P7) ATP-dependent RNA helicase sub2 (EC 3.6.1.-)| Length = 441 Score = 82.4 bits (202), Expect = 5e-16 Identities = 50/159 (31%), Positives = 91/159 (57%), Gaps = 2/159 (1%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLA-EGIKLFAI 181 DV+ I + PA++Q M+FSAT+ ++ + ++++ NPL + + D D KL G++ + I Sbjct: 225 DVQEIFRATPADKQVMMFSATLSQEIRPVCKKFMRNPLEVYV--DDDTKLTLHGLQQYYI 282 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 L+ K L++L+ + + I+F ++ A+E+ L + S A+H +SQ +R Sbjct: 283 KLSEAEKNRKLNELLDSL-EFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEER 341 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + F++ + VATDV RG+DI +L I+Y+LP Sbjct: 342 IKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLP 380
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 82.0 bits (201), Expect = 7e-16 Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++E I++ P RQ+MLFSATM V +L + L+ P+ + + D A G+ + Sbjct: 391 DELEEIIKACPRSRQTMLFSATMTDSVDELVKLSLDKPIRVFV--DPKRNTARGLTQEFV 448 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 + + R+ + K I+F R+K A ++ + + + LHG+++Q QR Sbjct: 449 RIRSDDSRSPSLLALCKRTIREKCIIFFRSKALAHQMRIVFGLFGLKAAELHGNLTQEQR 508 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ G L+ATD+ASRGLDI + +I+Y++P Sbjct: 509 LQALNDFKAGTVDYLLATDLASRGLDIKGVETVINYDMP 547
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 82.0 bits (201), Expect = 7e-16 Identities = 48/148 (32%), Positives = 81/148 (54%), Gaps = 1/148 (0%) Frame = +2 Query: 35 AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 + RQ+M+F+AT ++K++ YL P + + G++ + + I + +P + ++ Sbjct: 322 SNRQTMMFTATFSPTIEKVANGYLKKPSYVTVGGEESKPKIKQIVRY-VPDEEEKLKILV 380 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGK 391 D + Y I+F KR AD + L + + LHG SQ QRE +L+ R GK Sbjct: 381 KDFLPNYK--APIIIFINYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRNGK 438 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 +L+ATDVA RG+DIPN L+++ + P Sbjct: 439 VDILIATDVAGRGIDIPNVSLVVNLQFP 466
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 82.0 bits (201), Expect = 7e-16 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +D+ EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDDVTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 81.6 bits (200), Expect = 9e-16 Identities = 50/159 (31%), Positives = 91/159 (57%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ+ ++SAT P V++L+ +LN+ + ++ +G D I + Sbjct: 289 IRKIVSQIRPDRQTCMWSATWPKEVRQLATDFLNDYIQVN-IGSMDLSANHRITQIVEVV 347 Query: 188 TTTSKRT-ILSDLITVYA-KGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR ++ L + + K ++FT TKR ADE++ L + ++HGD Q +R Sbjct: 348 SDFEKRDKMIKHLEKIMENRSNKCLIFTGTKRIADEITRFLRQDGWPALSIHGDKQQQER 407 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + LN F+ GK ++VATDVASRG+D+ + +++Y+ P Sbjct: 408 DWVLNEFKTGKSPIMVATDVASRGIDVRDITHVLNYDYP 446
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 81.6 bits (200), Expect = 9e-16 Identities = 51/159 (32%), Positives = 88/159 (55%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 V I++Q P ERQ++LFSAT V L++++ +P +++ + + ++ ++ Sbjct: 180 VRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEI--EPENVASDTVEQHVY 237 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + + K +L +L+ + +VF K + + LT I++ + GD+ QH+R Sbjct: 238 AVAGSDKYKLLYNLVA-QNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKR 296 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RTL GFR+GK VLVATDVA RG+ I +I++ LP Sbjct: 297 IRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLP 335
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 81.6 bits (200), Expect = 9e-16 Identities = 49/160 (30%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L + Q +L SATMPS V +++++++ +P+ I + ++E EGI+ F I Sbjct: 194 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI--LVKKEELTLEGIRQFYI 251 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + A+HGD+ Q + Sbjct: 252 NVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKE 310 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 311 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 350
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 81.6 bits (200), Expect = 9e-16 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +DE EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+++LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLP 357
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 81.6 bits (200), Expect = 9e-16 Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 15/173 (8%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 ED++ IL P +RQ+++F+AT P V+ L+ ++ +P+ I + E ++L Sbjct: 323 EDIKMILSSCPPREKRQTLMFTATWPQSVQTLAATFMVSPVKIAIGSGGKETAGGAVELQ 382 Query: 176 AIPLTTTSKRTI--------LSDLITVYAKGGKT----IVFTRTKRDADEVSLALTTS-I 316 A + S + L +++ + +G K +VF K++A + L+ I Sbjct: 383 ANARISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKEATRIENFLSRKGI 442 Query: 317 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +HGD+ Q QR R+L F+ G+ VLVATDVA+RGLDIP L+I+ P Sbjct: 443 RVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVINVTFP 495
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 81.3 bits (199), Expect = 1e-15 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 4/161 (2%) Frame = +2 Query: 2 EDVETILQQLPAE----RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIK 169 + +++IL L A+ RQ+MLF+AT+ S V+ +++ YL NPL + + D + Sbjct: 350 DQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQ 409 Query: 170 LFAIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQ 349 + K + L D + G I+F K AD ++L L+ LHG SQ Sbjct: 410 VVRHTGDDDKKLSFLKD--DLIKNGLPAIIFINYKETADWLTLRLSDRFNIVTLHGSKSQ 467 Query: 350 HQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 QRE + + G VL+AT+VA+RGLDIP+ L++++++ Sbjct: 468 SQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQM 508
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/160 (30%), Positives = 90/160 (56%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I + LPA Q ++ SAT+P V +++ +++ +P+ I + +DE EG+K + I Sbjct: 185 EQIYDIYRYLPAATQVVVVSATLPHSVLEMTSKFMTDPVRI--LVKRDELTLEGLKQYFI 242 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F TK+ D ++ + + ++HGD++Q Sbjct: 243 AVEQEEWKFDTLCDLYDTLTIT-QAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKD 301 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ +N FR G+ VL++TDV +RG+D+ L+I+Y+LP Sbjct: 302 RDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLP 341
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + + + LP E Q +L SAT+P+ + +++ +++ +P+ I + +DE EGIK F + Sbjct: 179 DQIYDVYRYLPPELQVVLISATLPNEILEITSKFMTDPVRI--LVKRDELTLEGIKQFFV 236 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F TKR D ++ + + ++HGD+ Q + Sbjct: 237 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKE 295 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TDV +RGLD+ L+I+Y+LP Sbjct: 296 RDAIMAEFRGGTTRVLITTDVWARGLDVQQVSLVINYDLP 335
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 80.9 bits (198), Expect = 2e-15 Identities = 50/161 (31%), Positives = 88/161 (54%), Gaps = 5/161 (3%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I ++LP + Q LFSATMP+ + L+ +++ +P I + Q+E EGI+ F + + Sbjct: 194 IHDIFKKLPQDVQVALFSATMPNEILHLTTQFMRDPKRI--LVKQEELTLEGIRQFYVGV 251 Query: 188 TTTS-KRTILSDL---ITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQH 352 K L DL +T+ + I++ T+R D+++ + ++HGD+ Q Sbjct: 252 EKDEWKMDTLIDLYETLTIV----QAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQK 307 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 RE + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 308 DREVIMRQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 348
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ+++FSAT P ++ L+RR L+ P+ + + G + ++ I + Sbjct: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVI 600 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 K L +L+ Y + G I+F + AD + L S +LHG I Q+ R+ Sbjct: 601 EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F+ G +LVAT VA+RGLD+ + L+++Y P Sbjct: 661 IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) Length = 1032 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ+++FSAT P ++ L+RR L+ P+ + + G + ++ I + Sbjct: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVI 600 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 K L +L+ Y + G I+F + AD + L S +LHG I Q+ R+ Sbjct: 601 EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F+ G +LVAT VA+RGLD+ + L+++Y P Sbjct: 661 IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) (PRP5 homolog) Length = 1032 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ+++FSAT P ++ L+RR L+ P+ + + G + ++ I + Sbjct: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRS--VVCSDVEQQVIVI 600 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 K L +L+ Y + G I+F + AD + L S +LHG I Q+ R+ Sbjct: 601 EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F+ G +LVAT VA+RGLD+ + L+++Y P Sbjct: 661 IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 80.9 bits (198), Expect = 2e-15 Identities = 49/145 (33%), Positives = 78/145 (53%), Gaps = 1/145 (0%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILSD 220 R + LFSATMP V++L+R+YL P T+ ++G+ E + + K+ L + Sbjct: 518 RVTTLFSATMPPAVERLARKYLIKPATV-VIGNAGEAVDTVEQRVEFVHGDEKKKARLIE 576 Query: 221 LITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQRERTLNGFRQGKFT 397 ++ IVF K+ AD V ++ LH SQ QRE L R G+ + Sbjct: 577 ILRTIGLPPPIIVFVNQKKTADMVVKYVQQAGMSGVTLHSGKSQEQREAALQALRDGEIS 636 Query: 398 VLVATDVASRGLDIPNGDLIIHYEL 472 VLVATD+A RG+D+P+ L+I++++ Sbjct: 637 VLVATDLAGRGIDVPDVSLVINWQM 661
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L + Q +L SATMPS V +++++++ +P+ I + ++E EGI+ F I Sbjct: 194 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI--LVKKEELTLEGIRQFYI 251 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + A+HGD+ Q + Sbjct: 252 NVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 311 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 350
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L + Q +L SATMPS V +++++++ +P+ I + ++E EGI+ F I Sbjct: 194 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI--LVKKEELTLEGIRQFYI 251 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + A+HGD+ Q + Sbjct: 252 NVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 311 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 350
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L + Q +L SATMPS V +++++++ +P+ I + ++E EGI+ F I Sbjct: 194 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI--LVKKEELTLEGIRQFYI 251 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + A+HGD+ Q + Sbjct: 252 NVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 310 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 311 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 350
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 80.5 bits (197), Expect = 2e-15 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E ++ I+ +LP Q++LFSAT+P + + +R L P+ I L D D KL E +K + Sbjct: 258 EQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL--DVDSKLNEQLKTSFL 315 Query: 182 PLTTTSKRTILSDLI-TVYAKGGKTIVFTRTKRDADEVS-LALTTSIASEALHGDISQHQ 355 + +K +L L+ V +T+VF TK A+ ++ L + ++ ++ + Q Sbjct: 316 LVREDTKAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTA 375 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ L F K + L+ TD+A+RGLDIP D +I+Y P Sbjct: 376 RKINLAKFTHNKCSTLIVTDLAARGLDIPLLDNVINYSFP 415
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/156 (31%), Positives = 90/156 (57%), Gaps = 3/156 (1%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 I +LP Q ++ SATM + +++++++N+P+ I + +DE EGIK + + + Sbjct: 192 IFTKLPRTSQVVVVSATMSPEILEITKKFMNDPVKI--LVKRDEITLEGIKQYYVNVEKE 249 Query: 197 SKRTILSDLITVYAKGGKT--IVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERT 367 + L +Y T ++F +K+ D ++ L S A ++HGD+ Q +R+R Sbjct: 250 EWK--FDTLCDIYDSLTITQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRV 307 Query: 368 LNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N FR G+ VL++TDV +RG+D+ L+I+Y+LP Sbjct: 308 MNEFRTGQSRVLISTDVWARGIDVQQVSLVINYDLP 343
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 80.5 bits (197), Expect = 2e-15 Identities = 49/160 (30%), Positives = 88/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L + Q +L SATMPS V +++++++ +P+ I + ++E EGI+ F I Sbjct: 186 DQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI--LVKKEELTLEGIRQFYI 243 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + A+HGD+ Q + Sbjct: 244 NVEREEWKLDTLCDLYETLTIT-QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKE 302 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 303 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 342
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 80.1 bits (196), Expect = 3e-15 Identities = 48/163 (29%), Positives = 96/163 (58%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I +LP Q ++ SATM + +++++++++P+ I + +DE + IK + + Sbjct: 186 QQIYDIFTKLPPTIQVVVVSATMSKDILEITKKFMSDPVKI--LVKRDEISLDVIKQYYV 243 Query: 182 PLTTTS-KRTILSDL---ITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDIS 346 + K L DL +T+ + ++F T++ D +S LT T+ + ++HGD+ Sbjct: 244 DVEKEEWKFDTLCDLYDSLTIT----QCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMK 299 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R++ +N FR GK VL++TDV +RG+D+ L+I+Y++P Sbjct: 300 QEERDQVMNDFRSGKARVLISTDVWARGIDVQQISLVINYDIP 342
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 80.1 bits (196), Expect = 3e-15 Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I ++P + Q ++FSAT+P +K ++Y+ NP + + + A I+ IP Sbjct: 169 DVDYIGSRMPEDLQMLVFSATIPEKLKPFLKKYMENPKYAHV--EPKQVTAAKIEHILIP 226 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRE 361 K +L D+++ + IVF TK AD ++ LT + LHG ++ +R+ Sbjct: 227 SKHRDKDKLLFDIMS-HLNPYLGIVFANTKNTADHIAQYLTGKGMKIGLLHGGLTPRERK 285 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + + +FT ++ATD+A+RG+DI +I+YELP Sbjct: 286 KVMKQINDLEFTYIIATDLAARGIDIKGVSHVINYELP 323
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 80.1 bits (196), Expect = 3e-15 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L Q +L SATMP+ V +++++++ +P+ I + ++E EGIK F I Sbjct: 196 DQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI--LVKKEELTLEGIKQFYI 253 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + ALHGD+ Q + Sbjct: 254 NVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 312 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 313 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 352
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 80.1 bits (196), Expect = 3e-15 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 D+ TI +RQ++LFSATMP ++ ++ L P+TI++ A + + Sbjct: 357 DIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV----GRAGAASLDVIQEV 412 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQRE 361 + ++ L + ++F K D D + L + + A+HG Q +R Sbjct: 413 EYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERT 472 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + + FR+GK VLVATDVAS+GLD P +I+Y++P Sbjct: 473 KAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMP 510
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 80.1 bits (196), Expect = 3e-15 Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 D+ TI +RQ++LFSATMP ++ ++ L P+TI++ A + + Sbjct: 357 DIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINV----GRAGAASLDVIQEV 412 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQRE 361 + ++ L + ++F K D D + L + + A+HG Q +R Sbjct: 413 EYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERT 472 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + + FR+GK VLVATDVAS+GLD P +I+Y++P Sbjct: 473 KAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMP 510
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 80.1 bits (196), Expect = 3e-15 Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R++++ P+ I + +D+ EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI--LVKRDDVTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 357
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 80.1 bits (196), Expect = 3e-15 Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ I+ LP++RQ++LFSATM S +K+L L P+ I + + + I Sbjct: 372 DELNEIMSLLPSKRQTLLFSATMNSRIKQLISLSLKRPVRIMIDPPKQAATKLTQEFVRI 431 Query: 182 PLTTTSKRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQH 352 K ++L +LI G + +VF K A ++ + L +A LHG ++Q Sbjct: 432 RKRDHLKPSLLFNLIRKLDPNGQKRIVVFVARKDMAHKLRIILGLLGMAVAELHGSLTQE 491 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 QR ++N F+ + VL+ TD+ASRGLDIP +++I+Y++P Sbjct: 492 QRLDSVNKFKSLQVPVLICTDLASRGLDIPKIEVVINYDMP 532
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 80.1 bits (196), Expect = 3e-15 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L Q +L SATMP+ V +++++++ +P+ I + ++E EGIK F I Sbjct: 195 DQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI--LVKKEELTLEGIKQFYI 252 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + ALHGD+ Q + Sbjct: 253 NVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 311 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 312 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 351
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 80.1 bits (196), Expect = 3e-15 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L Q +L SATMP+ V +++++++ +P+ I + ++E EGIK F I Sbjct: 195 DQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI--LVKKEELTLEGIKQFYI 252 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + ALHGD+ Q + Sbjct: 253 NVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 311 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 312 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 351
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 80.1 bits (196), Expect = 3e-15 Identities = 50/160 (31%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q+L Q +L SATMP+ V +++++++ +P+ I + ++E EGIK F I Sbjct: 195 DQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI--LVKKEELTLEGIKQFYI 252 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + ALHGD+ Q + Sbjct: 253 NVEREEWKLDTLCDLYETLTIT-QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKE 311 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 312 RDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLP 351
>SUB2_KLULA (Q6CM95) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 437 Score = 80.1 bits (196), Expect = 3e-15 Identities = 48/158 (30%), Positives = 87/158 (55%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + RR+L NPL I V D+ + G++ + I Sbjct: 220 DVQDIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEI-FVDDEAKLTLHGLQQYYIK 278 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 L K L+ L+ + + I+F ++ A+E++ L S + +HG + Q +R Sbjct: 279 LNEKEKNRKLAQLLDDL-EFNQVIIFVKSTVRANELTKLLNASNFPAITVHGHMKQEERI 337 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F++ + + V+TDV RG+DI +L I+Y++P Sbjct: 338 ARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMP 375
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 79.7 bits (195), Expect = 4e-15 Identities = 51/158 (32%), Positives = 92/158 (58%), Gaps = 5/158 (3%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 I +LP+ Q ++ SATM V +++++++++P+ I + +DE EGIK + I + Sbjct: 191 IFTKLPSSVQVVVVSATMSKVVLEVTKKFMSDPVKI--LVKRDEVSLEGIKQYHINVDKE 248 Query: 197 S-KRTILSDL---ITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRE 361 K L DL +T+ + ++F TK+ D +S L + A ++HGD+ Q R+ Sbjct: 249 EWKFDTLCDLYDSLTIT----QCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRD 304 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + ++ FR G VL++TDV +RG+D+ L+I+Y+LP Sbjct: 305 KVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLP 342
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 79.7 bits (195), Expect = 4e-15 Identities = 48/161 (29%), Positives = 91/161 (56%), Gaps = 5/161 (3%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V+ L+ +L + + ++ +G D I + Sbjct: 300 IRKIIGQIRPDRQTLMWSATWPKEVRNLAADFLTDFIQVN-IGSMDLAANHRITQIVEVV 358 Query: 188 TTTSKRTILSDLITVYAKG----GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQH 352 + + KR + + +G K ++FT TKR AD+++ L + ++HGD Q+ Sbjct: 359 SESEKRDRMIKHLEKIMEGRENQNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQN 418 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R+ L+ F+ GK ++VATDVASRG+D+ N +++Y+ P Sbjct: 419 ERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYP 459
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 79.7 bits (195), Expect = 4e-15 Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I + LP Q +L SATMP V +++ +++NNP+ I + +DE EGIK F I Sbjct: 184 EQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNPVRI--LVKKDELTLEGIKQFYI 241 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQ 355 + K L DL + + ++F T+ + ++ L A+H D+ Q + Sbjct: 242 NVELEDYKFDCLCDLYDSISVT-QAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAE 300 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 301 RDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLP 340
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 79.7 bits (195), Expect = 4e-15 Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAE--RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ +L+++P RQ++LFSAT+ V +L+ ++N P LV + + A ++ Sbjct: 178 KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEK--LVVETESITAARVRQR 235 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQH 352 + K+T+L L++ ++G +T+VF TK + V+ L L GD+ Q Sbjct: 236 IYFPSDEEKQTLLLGLLS-RSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQK 294 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE LN F++G+ +LVATDVA+RGL I + +Y+LP Sbjct: 295 KRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLP 335
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) Length = 1032 Score = 79.7 bits (195), Expect = 4e-15 Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ+++FSAT P ++ L RR L+ P+ + + G + ++ I + Sbjct: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALVRRILSKPIEVQVGGRS--VVCSDVEQQVIVI 600 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 K L +L+ Y + G I+F + AD + L S +LHG I Q+ R+ Sbjct: 601 EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F+ G +LVAT VA+RGLD+ + L+++Y P Sbjct: 661 IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 79.7 bits (195), Expect = 4e-15 Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R++++ P+ I + +DE EGIK F + Sbjct: 200 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI--LVKRDELTLEGIKQFYV 257 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 258 NVEKEDWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 316 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+++LP Sbjct: 317 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLP 356
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 79.7 bits (195), Expect = 4e-15 Identities = 50/160 (31%), Positives = 89/160 (55%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R++++ P+ I + +DE EGIK F + Sbjct: 200 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVRI--LVKRDELTLEGIKQFYV 257 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 258 NVEKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 316 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G VL+ TD+ +RG+D+ L+I+++LP Sbjct: 317 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLP 356
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 79.7 bits (195), Expect = 4e-15 Identities = 48/157 (30%), Positives = 83/157 (52%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ+++FSAT P ++ L+RR L+ P+ + + G + ++ I + Sbjct: 511 VMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRS--VVCSDVEQHVIVI 568 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRER 364 K L +++ Y + G I+F + AD + L S +LHG I Q+ R+ Sbjct: 569 EEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDS 628 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +N F+ G +LVAT VA+RGLD+ L+++Y P Sbjct: 629 IINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCP 665
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 79.3 bits (194), Expect = 5e-15 Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ IL++LP RQ++LFSAT+ V +L+ Y+N P LV + + ++ Sbjct: 178 KDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEK--LVAETETVTTTRVRQR 235 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQH 352 K +L L++ ++G +T+VF TK + V+ AL + L GD+ Q Sbjct: 236 IYFPAEEEKIPLLLGLLS-RSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQR 294 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE LN F++G+ +LVATDVA+RGL I + + +Y+LP Sbjct: 295 KRETLLNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLP 335
>SUB2_ASHGO (Q759L6) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 438 Score = 79.3 bits (194), Expect = 5e-15 Identities = 48/158 (30%), Positives = 87/158 (55%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + RR+L NPL I V D+ + G++ + I Sbjct: 221 DVQDIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEI-FVDDEAKLTLHGLQQYYIR 279 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 L K L+ L+ + + I+F ++ A+E++ L S + +HG + Q +R Sbjct: 280 LEEREKNRKLAQLLDDL-EFNQVIIFVKSTLRANELTKLLNASNFPAITVHGHMRQEERI 338 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F++ + + V+TDV RG+DI +L I+Y++P Sbjct: 339 ARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMP 376
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 79.3 bits (194), Expect = 5e-15 Identities = 53/155 (34%), Positives = 86/155 (55%), Gaps = 6/155 (3%) Frame = +2 Query: 29 LPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIK-LFAIPLTTTSKR 205 LP + Q +LFSAT V++ +RR + N +++L ++E IK LF K Sbjct: 247 LPKDTQLVLFSATFDDSVREYARRVVPNANSLEL--QRNEVNVSAIKQLFMDCNDERHKF 304 Query: 206 TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEA-----LHGDISQHQRERTL 370 T+L DL + G +I+F +TK+ A+ L T + E LHGD+ R+R + Sbjct: 305 TVLCDLYGLLTIGS-SIIFVQTKQTAN----MLYTELKREGHQVSILHGDLQSADRDRLI 359 Query: 371 NGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 FR+G+ VL+ T+V +RG+DIP ++++Y+LP Sbjct: 360 GDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP 394
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 79.3 bits (194), Expect = 5e-15 Identities = 47/159 (29%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V++L+R YL++P+ ++ +G + + I + Sbjct: 282 IRKIVDQIRPDRQTLMWSATWPKEVQQLARDYLHDPIQVN-IGSLELAASHTITQLGEVV 340 Query: 188 TTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + KR L + + +K K I+ TKR DE++ L + A+HG Sbjct: 341 SDFDKRDRLVKHLEIGSKDKDSKIIILHSTKRTCDEITSYLRQDGWPALAIHGPTPLQDI 400 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + TLN +R G+ ++VATDV +RG+D+ + +I+Y++P Sbjct: 401 DCTLNDYRTGRSPIMVATDVVARGIDVKGINFVINYDMP 439
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 79.3 bits (194), Expect = 5e-15 Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAE--RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ +L+++P RQ++LFSAT+ V +L+ ++N P LV + + A ++ Sbjct: 178 KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEK--LVVETETITAARVRQR 235 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQH 352 + K+T+L L++ ++G +T+VF TK + V+ L L GD+ Q Sbjct: 236 IYFPSDDEKQTLLLGLLS-RSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQK 294 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE LN F++G+ +LVATDVA+RGL I + +Y+LP Sbjct: 295 KRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLP 335
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 79.3 bits (194), Expect = 5e-15 Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAE--RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ +L+++P RQ++LFSAT+ V +L+ ++N P LV + + A ++ Sbjct: 178 KDIRFLLRRMPERGTRQTLLFSATLSHRVLELAYEHMNEPEK--LVVETETITAARVRQR 235 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQH 352 + K+T+L L++ ++G +T+VF TK + V+ L L GD+ Q Sbjct: 236 IYFPSDEEKQTLLLGLLS-RSEGARTMVFVNTKAFVERVARTLERHGYRVGVLSGDVPQK 294 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE LN F++G+ +LVATDVA+RGL I + +Y+LP Sbjct: 295 KRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLP 335
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 79.0 bits (193), Expect = 6e-15 Identities = 51/163 (31%), Positives = 92/163 (56%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI--KLF 175 E+++ I+ +P++RQ++LFSATM S +K+L L P+ I + D ++ A+ + + Sbjct: 399 EELQEIMSLIPSKRQTLLFSATMNSKIKQLISLSLKKPVRIMI--DPPKQAADKLTQEFI 456 Query: 176 AIPLTTTSKRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLAL-TTSIASEALHGDIS 346 I K +L LI + +VF K A ++ + L + LHG ++ Sbjct: 457 RIRKRDHLKPALLYQLIRKLDNTSQKRIVVFVARKETAHKLRIVLGLLGMQVGELHGSLT 516 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q QR +++N F+ + VL+ TD+ASRGLDIP +++I++++P Sbjct: 517 QEQRLQSVNNFKSLQVPVLICTDLASRGLDIPKIEVVINFDMP 559
>SUB2_YARLI (Q6CH89) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 441 Score = 79.0 bits (193), Expect = 6e-15 Identities = 47/158 (29%), Positives = 88/158 (55%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + ++++++PL I LV D+ + G++ + + Sbjct: 224 DVQEIFRVTPRQKQVMMFSATLSQEIRPICKKFMSSPLEI-LVDDEGKLTLHGLQQYYVD 282 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 + SK L DL+ + + I+F ++ A+ +S L + A+H I Q +R Sbjct: 283 VEEKSKNRKLGDLLD-NLEFNQVIIFVKSTSRANGLSQVLNANGFPCTAVHSGIPQEERI 341 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F++ K + V+TDV RG+DI +L I+Y+LP Sbjct: 342 ARYKEFKEFKKRICVSTDVFGRGIDIERINLAINYDLP 379
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 78.6 bits (192), Expect = 8e-15 Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ IL++LP RQ++LFSAT+ V +L+ Y+N P LV + + ++ Sbjct: 178 KDIRFILRRLPERCSRQTLLFSATLSHRVLELAYEYMNEPEK--LVAETESVTTTRVRQR 235 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQH 352 K +L L++ +G +T+VF TK + V+ AL + L GD+ Q Sbjct: 236 IYFPAEEEKIPLLLGLLS-RNEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQR 294 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE LN F++G+ +LVATDVA+RGL I + + +Y+LP Sbjct: 295 KRETLLNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLP 335
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 78.6 bits (192), Expect = 8e-15 Identities = 45/147 (30%), Positives = 84/147 (57%), Gaps = 3/147 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+++ATMP V++++++YL P +TI G+ + + + ++ + ++ L Sbjct: 495 RQTMMYTATMPPLVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVS---GEDRRKKRL 551 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQGK 391 ++++ G IVF KR+ D V+ + ++ LHG +Q QRE L R G Sbjct: 552 QEILSSGNFGPPIIVFVNIKRNCDAVARDIKQMGWSAVTLHGSKTQEQREAALGSVRAGH 611 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYEL 472 VLVATD+A RG+D+P+ L++++ + Sbjct: 612 TQVLVATDLAGRGIDVPDVSLVVNFNM 638
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 78.2 bits (191), Expect = 1e-14 Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 1/147 (0%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTILS 217 +RQ++LFSAT P +++L+ +L + VG Q ++ + + K+ L Sbjct: 459 QRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVG-QVGGACRDVQQSILQVGPVFKKRKLV 517 Query: 218 DLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQGKF 394 +++ + +VF TK+ AD ++ L I++ ++HGD Q +RE+ L FR GK Sbjct: 518 EILRNIGDE-RPMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKC 576 Query: 395 TVLVATDVASRGLDIPNGDLIIHYELP 475 VLVAT VA+RGLDI N +I++ LP Sbjct: 577 PVLVATSVAARGLDIENVQHVINFNLP 603
>RHLB_PSESM (Q887N8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 77.8 bits (190), Expect = 1e-14 Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 V I++Q P ERQ++LFSAT V L++++ +P +++ + ++ ++ Sbjct: 179 VRQIIRQTPHKGERQTLLFSATFTEDVMNLAKQWTTDPSIVEI--ESLNVASDNVEQHIY 236 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEA-LHGDISQHQR 358 + K +L +L+T + +VF K + + L + A L GD+ QH+R Sbjct: 237 AVAGADKYKLLYNLVTDNG-WERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKR 295 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +TL GFR+GK VLVATDVA RG+ I +I++ LP Sbjct: 296 IKTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLP 334
>SUB2_YEAST (Q07478) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-) (Suppressor| of BRR1 protein 2) Length = 446 Score = 77.8 bits (190), Expect = 1e-14 Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 1/157 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + RR+L NPL I V D+ + G++ + I Sbjct: 229 DVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEI-FVDDEAKLTLHGLQQYYIK 287 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 L K L+ L+ + + I+F ++ A+E++ L S + +HG + Q +R Sbjct: 288 LEEREKNRKLAQLLDDL-EFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERI 346 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 F+ + + V+TDV RG+DI +L I+Y+L Sbjct: 347 ARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDL 383
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 77.8 bits (190), Expect = 1e-14 Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 3/149 (2%) Frame = +2 Query: 35 AERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRT 208 + RQ+++FSAT+P V L++ YL P LTI +G +++ + +++ + + K Sbjct: 448 SRRQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMIS---DDSKKWR 504 Query: 209 ILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQ 385 + +++ I+F KR+ + ++ L + LHG SQ QRER + R Sbjct: 505 RVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRN 564 Query: 386 GKFTVLVATDVASRGLDIPNGDLIIHYEL 472 +LVATD+A RG+DIPN L+++Y + Sbjct: 565 KTADILVATDIAGRGIDIPNVSLVLNYNM 593
>SUB2_SCHPO (O13792) ATP-dependent RNA helicase uap56 (EC 3.6.1.-)| Length = 434 Score = 77.8 bits (190), Expect = 1e-14 Identities = 41/158 (25%), Positives = 88/158 (55%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 D++ + + P ++Q M+FSAT+ + ++ + ++++ NPL I V D+ + G++ + Sbjct: 218 DIQEVFRATPPQKQVMMFSATLSNEIRPICKKFMQNPLEI-YVDDETKLTLHGLQQHYVK 276 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRE 361 L +K ++DL+ + + ++F ++ A+E+ L + S +HG + Q +R Sbjct: 277 LEEKAKNRKINDLLDSL-EFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERI 335 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + F+ + VATDV RG+DI +++I+Y++P Sbjct: 336 KRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMP 373
>SUB2_CANGA (Q6FL17) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 439 Score = 77.8 bits (190), Expect = 1e-14 Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 1/157 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P ++Q M+FSAT+ ++ + RR+L NPL I V D+ + G++ + I Sbjct: 222 DVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEI-FVDDEAKLTLHGLQQYYIK 280 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRE 361 L K L+ L+ + + I+F ++ A+E++ L S + +HG + Q +R Sbjct: 281 LEEREKNRKLAQLLDDL-EFNQVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERI 339 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 F+ + + V+TDV RG+DI +L I+Y+L Sbjct: 340 ARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDL 376
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 77.8 bits (190), Expect = 1e-14 Identities = 52/163 (31%), Positives = 90/163 (55%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 +++ I+ +P++RQ++LFSATM S +K+L L P+ I + D ++ A + + Sbjct: 385 DELNEIMSLIPSKRQTLLFSATMNSRIKQLISLSLKKPVRIMI--DPPKQAANKLTQEFV 442 Query: 182 PLTTTS--KRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLAL-TTSIASEALHGDIS 346 L K +L L+ G + +VF K A + + L + + LHG ++ Sbjct: 443 RLRKREHLKPALLYHLLRKLDSTGQKRIVVFVARKEVAHRLRVILGLLGMKAGELHGSLT 502 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q QR +++N F+ VLV TD+ASRGLDIP +++I+Y++P Sbjct: 503 QEQRLQSVNNFKSLDVPVLVCTDLASRGLDIPKIEVVINYDMP 545
>IF413_TOBAC (Q40466) Eukaryotic initiation factor 4A-13 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-13) (eIF-4A-13) (Fragment) Length = 355 Score = 77.8 bits (190), Expect = 1e-14 Identities = 49/158 (31%), Positives = 87/158 (55%), Gaps = 2/158 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I Q LP + Q +FSATMP +++R+++N P+ I + +D+ EGIK F + Sbjct: 201 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNQPVRI--LVKRDDVTLEGIKQFYV 258 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQ 355 + K L DL A ++++F T+R D ++ + + + A HGD+ Q+ Sbjct: 259 NVDKEEWKLETLCDLYETLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 317 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYE 469 R+ + FR G VL+ TD+ +RG+D+ L+I+Y+ Sbjct: 318 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 355
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 77.8 bits (190), Expect = 1e-14 Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I LP Q +L SATMP V +++ +++ +P+ I + +DE EGI + + Sbjct: 183 EQIYNIFTMLPPTSQVVLLSATMPGDVLEVTSKFMKDPVRI--LVKKDELTLEGIGQYYV 240 Query: 182 PLTTTSKR----TILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDIS 346 + + T L D I+V + ++F T+R +E++ L + A++ D+ Sbjct: 241 NVEEEQYKYDCLTDLYDSISVT----QAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQ 296 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R+ + FR G +L++TD+ +RG+D+ L+I+Y+LP Sbjct: 297 QQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLP 339
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 77.4 bits (189), Expect = 2e-14 Identities = 48/159 (30%), Positives = 89/159 (55%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 + I+ Q+ +RQ++++SAT P V+ L+ +L + + ++ +G + I + Sbjct: 302 IRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVN-IGSMELAANHRITQIVEVV 360 Query: 188 TTTSKRTILSDLI--TVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 T KR + + + K K ++F TKR ADE++ L + ++HGD Q++R Sbjct: 361 TEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNER 420 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + L+ F+ GK ++VATDVASRG+D+ N +++Y+ P Sbjct: 421 DWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYP 459
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 77.4 bits (189), Expect = 2e-14 Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI--KLF 175 +++ I+ LP+ RQ++LFSATM S +K L L P+ I + D +K A + + Sbjct: 397 DELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKKPVRIMI--DPPKKAATKLTQEFV 454 Query: 176 AIPLTTTSKRTILSDLITVYAKGG--KTIVFTRTKRDADEVSLAL-TTSIASEALHGDIS 346 I K +L +LI G + +VF K A + + + ++ LHG ++ Sbjct: 455 RIRKRDHLKPALLFNLIRKLDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLT 514 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q QR ++N F+ + VL+ TD+ASRGLDIP +++I+Y++P Sbjct: 515 QEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMP 557
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 77.0 bits (188), Expect = 2e-14 Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I+ + +RQ++LFSAT P ++ L+R+ L P+ I VG + +E ++ + Sbjct: 589 VMRIINNIRPDRQTVLFSATFPRAMEALARKVLKKPVEIT-VGGRSVVASEVEQIVEVRP 647 Query: 188 TTTSKRTILSDLITVYAK--GGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQHQR 358 + +L L +Y +T+VF + AD + S + S ++HG QH R Sbjct: 648 EESKFSRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDR 707 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + T++ ++ G F VL+AT V +RGLD+ + L+++Y+ P Sbjct: 708 DSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDCP 746
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 77.0 bits (188), Expect = 2e-14 Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 4/160 (2%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNN-PLTIDLVGDQDEKLAEGIKLFAIP 184 V IL + +RQ++LFSAT P ++ L+R+ L N PL I VG + AE ++ + Sbjct: 647 VMKILNNIRPDRQTVLFSATFPKQMESLARKVLKNKPLEIT-VGGRSVVAAEIEQIVEVR 705 Query: 185 LTTTSKRTILSDLITVY--AKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQ 355 T +L L +Y K +T++F + AD++ L + +LHG Q Sbjct: 706 SEDTKFHRLLEILGELYNREKDARTLIFVDRQEAADDLLKDLIRKGYVTMSLHGGKDQVD 765 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ T++ F+ G ++ AT VA+RGLD+ L+I+Y++P Sbjct: 766 RDETISDFKAGNVPIVTATSVAARGLDVKQLKLVINYDVP 805
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 77.0 bits (188), Expect = 2e-14 Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q ++ SAT+P V ++ +++ +P+ I + +DE EG+K + I Sbjct: 188 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRI--LVKRDELTLEGLKQYFI 245 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HGD+ Q + Sbjct: 246 AVEKEDWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKE 304 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL++TDV +RG+D+ L+I+Y+LP Sbjct: 305 RDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLP 344
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 77.0 bits (188), Expect = 2e-14 Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q ++ SAT+P V ++ +++ +P+ I + +DE EG+K + I Sbjct: 187 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRI--LVKRDELTLEGLKQYFI 244 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HGD+ Q + Sbjct: 245 AVEKEDWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKE 303 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL++TDV +RG+D+ L+I+Y+LP Sbjct: 304 RDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLP 343
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 77.0 bits (188), Expect = 2e-14 Identities = 49/151 (32%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Frame = +2 Query: 29 LPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIK-LFAIPLTTTSKR 205 LP Q +LFSAT V++ +++ + ++++L ++E IK LF K Sbjct: 248 LPKTCQLVLFSATFDDGVRQYAKKIIPTAVSLEL--QKNEVNVSAIKQLFMDCDNEEHKY 305 Query: 206 TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEA-LHGDISQHQRERTLNGFR 382 TILS+L + G +I+F +TK+ A+ + L + LHGD+ R+R ++ FR Sbjct: 306 TILSELYGLLTIGS-SIIFVKTKQTANLLYAKLKKEGHQVSILHGDLQSQDRDRLIDDFR 364 Query: 383 QGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +G+ VL+ T+V +RG+DIP+ ++++Y+LP Sbjct: 365 EGRSKVLITTNVLARGIDIPSVSMVVNYDLP 395
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 76.6 bits (187), Expect = 3e-14 Identities = 49/155 (31%), Positives = 87/155 (56%), Gaps = 6/155 (3%) Frame = +2 Query: 29 LPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIK-LFAIPLTTTSKR 205 LP + Q +LFSAT V++ +++ + N T++L +E + IK L+ K Sbjct: 261 LPKDTQLVLFSATFADAVRQYAKKIVPNANTLEL--QTNEVNVDAIKQLYMDCKNEADKF 318 Query: 206 TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEA-----LHGDISQHQRERTL 370 +L++L + G +I+F TK+ A+ L + SE LHGD+ +R+R + Sbjct: 319 DVLTELYGLMTIGS-SIIFVATKKTAN----VLYGKLKSEGHEVSILHGDLQTQERDRLI 373 Query: 371 NGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + FR+G+ VL+ T+V +RG+DIP ++++Y+LP Sbjct: 374 DDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP 408
>DBP5_DEBHA (Q6BRE4) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 493 Score = 76.6 bits (187), Expect = 3e-14 Identities = 47/155 (30%), Positives = 88/155 (56%), Gaps = 2/155 (1%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 + + LP Q +LFSAT P V+K + +++ N +++L Q+E EGIK + + Sbjct: 268 VKRTLPKATQLVLFSATFPDEVRKYAEKFVPNANSLEL--KQEELNVEGIKQLYMDCDSA 325 Query: 197 S-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTL 370 + K +LS+L + G +I+F +TK A+ + + LH + +R+R + Sbjct: 326 NHKFEVLSELYGLLTIGS-SIIFVKTKDTANILYAKMKKEGHKCSILHAGLETSERDRLI 384 Query: 371 NGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + FR+G+ VL+ T+V +RG+DI + ++++Y+LP Sbjct: 385 DDFREGRSKVLITTNVLARGIDIASVSMVVNYDLP 419
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 76.3 bits (186), Expect = 4e-14 Identities = 43/147 (29%), Positives = 83/147 (56%), Gaps = 3/147 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+M+++ATMP V++++++YL P +TI G+ + + + ++ + ++ L Sbjct: 500 RQTMMYTATMPPIVERIAKKYLRRPAIVTIGNAGEAVDTVEQRVEFVS---GEDKRKKRL 556 Query: 215 SDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQRERTLNGFRQGK 391 +++ IVF KR+ D V+ + ++ LHG +Q QRE L R G+ Sbjct: 557 QEILNSGQFKPPIIVFVNIKRNCDMVARDIKGMGYSAVTLHGSKTQEQREAALASLRNGQ 616 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYEL 472 +LVATD+A RG+D+P+ L++++ + Sbjct: 617 TDILVATDLAGRGIDVPDVSLVVNFNM 643
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 76.3 bits (186), Expect = 4e-14 Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 12/157 (7%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP--LTIDLVGDQDEKLAEGIKLFAI-----PLTTT 196 +R +++F+AT+ ++K+++ YL P L I VG+ + + + + F + Sbjct: 358 KRITLMFTATISPPIEKITKNYLMKPGYLFIGNVGEAVDNINQQFEYFGARQSSDEILDP 417 Query: 197 SKRTILSDLITVYAKGGKT---IVFTRTKRDADEVSLALTTSIASE--ALHGDISQHQRE 361 K L ++ + + I+F K+ +E++ L+ S+ +HG SQ RE Sbjct: 418 KKLDKLFSILRFHKDENRNYSIIIFANFKKACEELAYELSRKGFSDNTVIHGSKSQEARE 477 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYEL 472 R ++ FR+GK +L+ATDVA+RG+DIPN L+++Y++ Sbjct: 478 RAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQM 514
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 76.3 bits (186), Expect = 4e-14 Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 23/180 (12%) Frame = +2 Query: 5 DVETIL--QQLPAE--RQSMLFSATMPSWVKKLSRRYLNNP---LTIDLVG--------- 136 D++TI+ + +P + RQ+++FSAT P V++ +R +L L ID +G Sbjct: 724 DIDTIVNYESMPKKENRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQE 783 Query: 137 ----DQDEKLAEGIKLFAIPLT--TTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSL 298 D+ EK + +++ I + TT K + VY K KTIVF + AD ++ Sbjct: 784 FEKCDRSEKKDKLLEILGIDIDSYTTEKNS------EVYTK--KTIVFVSQRAMADTLAS 835 Query: 299 ALTTS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L+++ + + +HG Q +R L FR G VL+AT VA RGLDI D +I+Y++P Sbjct: 836 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 895
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q ++ SAT+P V ++ +++ +P+ + + +DE EGIK + I Sbjct: 185 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRV--LVKRDELTLEGIKQYFI 242 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HG++ Q + Sbjct: 243 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKE 301 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL++TDV +RG+D+ L+I+Y+LP Sbjct: 302 RDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLP 341
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q ++ SAT+P V ++ +++ +P+ + + +DE EGIK + I Sbjct: 185 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRV--LVKRDELTLEGIKQYFI 242 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HG++ Q + Sbjct: 243 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKE 301 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL++TDV +RG+D+ L+I+Y+LP Sbjct: 302 RDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLP 341
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I + LP Q ++ SAT+P V +++ ++ NP+ I + +DE EG+K + I Sbjct: 182 EQIYDIYRYLPPGTQVVVVSATLPQDVLEMTNKFTTNPVRI--LVKRDELTLEGLKQYFI 239 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F ++R D ++ + + ++HG++ Q + Sbjct: 240 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKE 298 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL+ TD+ +RG+D+ L+I+Y+LP Sbjct: 299 RDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLP 338
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 75.9 bits (185), Expect = 5e-14 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + + + LP Q ++ SAT+P V ++ +++ +P+ + + +DE EGIK + I Sbjct: 186 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRV--LVKRDELTLEGIKQYFI 243 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HG++ Q + Sbjct: 244 AVEKEEWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKE 302 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FRQG VL++TDV +RG+D+ L+I+Y+LP Sbjct: 303 RDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLP 342
>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 760 Score = 75.1 bits (183), Expect = 9e-14 Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E ++ I++ RQ+MLFSATM VK L+ L NP+ I + + D + I Sbjct: 349 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 408 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQR 358 R + + + ++FT+TK+ A + + L + LHG++SQ QR Sbjct: 409 RPNREGDREAIVAALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQR 468 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L F+ + +LVATDVA+RGLDI +I++ +P Sbjct: 469 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 507
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 74.7 bits (182), Expect = 1e-13 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ + +++P +R +MLFSAT+ V++L+ ++NNP + V + ++K I+ Sbjct: 177 KDIRFLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHV--VVEPEQKTGHRIQEE 234 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEAL-HGDISQH 352 + K +L LI + I+F TK +++ L L GD+ Q Sbjct: 235 LFYPSNEHKMALLQTLIEEEWPD-RAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQK 293 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RER L F QG +LVATDVA+RGL IP + +Y+LP Sbjct: 294 KRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLP 334
>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)| (DEAD box protein 27) Length = 796 Score = 74.7 bits (182), Expect = 1e-13 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 1/159 (0%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E ++ I++ RQ+MLFSATM VK L+ L NP+ I + + D + I Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 442 Query: 182 PLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQR 358 R + + ++FT+TK+ A + + L + LHG++SQ QR Sbjct: 443 RPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQR 502 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L F+ + +LVATDVA+RGLDI +I++ +P Sbjct: 503 LEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMP 541
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 74.3 bits (181), Expect = 1e-13 Identities = 40/149 (26%), Positives = 77/149 (51%), Gaps = 4/149 (2%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQ---DEKLAEGIKLFAIPLTTTSKRTI 211 R + +FSAT P V+ L+ ++N P+ + + D+ + ++ + +++ A + Sbjct: 350 RHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLND 409 Query: 212 LSDLITVYAKGGKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQRERTLNGFRQG 388 + K ++F K++A + L +HGD+ Q++R +L F+ Sbjct: 410 FLRSVNAQRSKDKILIFALYKKEAQRIEQTLRRGGFKVSGIHGDLGQNERIASLERFKSA 469 Query: 389 KFTVLVATDVASRGLDIPNGDLIIHYELP 475 + +LVATDVA+RGLDIPN + +++Y P Sbjct: 470 ETPLLVATDVAARGLDIPNVEHVVNYTFP 498
>UAP56_CAEEL (Q18212) Spliceosome RNA helicase BAT1 homolog (EC 3.6.1.-) (DEAD| box protein UAP56) Length = 425 Score = 74.3 bits (181), Expect = 1e-13 Identities = 40/158 (25%), Positives = 87/158 (55%), Gaps = 1/158 (0%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I++ P ++Q M+FSAT+P ++ + +R++ +P+ + V D+ + G++ + Sbjct: 206 DVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEV-YVDDEAKLTLHGLQQHYVK 264 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRE 361 L K L +L+ + + ++F + + + + LT + S A+H ++Q +R Sbjct: 265 LKEAEKNRRLLNLLDAL-EFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERL 323 Query: 362 RTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F+ + +LVATD+ RG+DI +++ +Y++P Sbjct: 324 SRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMP 361
>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline| helicase 3) Length = 720 Score = 74.3 bits (181), Expect = 1e-13 Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 19/165 (11%) Frame = +2 Query: 38 ERQSMLFSATMPSWVKKLSRRYLNNP---LTIDLVG-------------DQDEKLAEGIK 169 +RQ+M+FSAT PS V++ +R+ L +TID +G D+ K+ + +K Sbjct: 485 KRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIGAANKCVIQEFELCDRTSKVDKLLK 544 Query: 170 LFAIPLTT--TSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGD 340 L I + T T K + V+ K KTIVF ++ AD + S+ + + +HG Sbjct: 545 LLGIDIDTYTTEKNS------DVFVK--KTIVFVAQQKMADTLASIMSAAQVPAITIHGA 596 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R L FR G VL+AT V RGLDI D +I+Y++P Sbjct: 597 REQKERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMP 641
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 73.9 bits (180), Expect = 2e-13 Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 1/157 (0%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I Q+ +RQ+++FSAT P +++L+ + + I VG + + + + I Sbjct: 269 VRKICGQIRPDRQTVMFSATWPREIQRLAAEFQKQWIRIS-VGSTELQANKDVTQRFILT 327 Query: 188 TTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRER 364 +K+ L L+ + + + +VF + KR ADE+ L + A+HGD Q QRE Sbjct: 328 QEFAKQDELRKLMQEHREE-RVLVFCKMKRTADELERQLRRWGYDAMAIHGDKEQRQREF 386 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L FR+ LVATDVA+RGLDI + +I+Y+ P Sbjct: 387 ILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFP 423
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 73.6 bits (179), Expect = 3e-13 Identities = 46/159 (28%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 V I + +RQ++LFSATMP + L+++ L NP+ + VG + E ++ + Sbjct: 768 VMKIFANMRPDRQTILFSATMPRIIDSLTKKVLKNPIEVT-VGGRSVVAKEIEQIVEVRD 826 Query: 188 TTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTTS-IASEALHGDISQHQR 358 + +L L +Y + +T++F + AD++ L ++HG Q R Sbjct: 827 EPSKFHRVLELLGELYDRDEDARTLIFVERQEKADDLLKELMMKGYPCMSIHGGKDQIDR 886 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + T++ F++G +L+AT VA+RGLD+ L+I+Y+ P Sbjct: 887 DSTISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAP 925
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 73.6 bits (179), Expect = 3e-13 Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 2/160 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 + + I + LP Q ++ SAT+P V +++ +++ +P+ I + +DE EGIK F + Sbjct: 184 DQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPVRI--LVKRDELTLEGIKQFFV 241 Query: 182 PLTTTS-KRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALT-TSIASEALHGDISQHQ 355 + K L DL + ++F T+R D ++ + + ++HG++ Q + Sbjct: 242 AVEKEDWKFDTLCDLYDTLTIT-QAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKE 300 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+ + FR G+ VL+ TDV +RG+D+ L+I+Y+LP Sbjct: 301 RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLP 340
>DHH1_ASHGO (Q75BS4) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 484 Score = 73.6 bits (179), Expect = 3e-13 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 VE IL LP QS+LFSAT P VK+ ++LN P I+L+ DE +GI + Sbjct: 192 VEQILSFLPQNHQSLLFSATFPLTVKEFMVKHLNKPYEINLM---DELTLKGITQY---Y 245 Query: 188 TTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQR 358 +R L L T+++K + I+F + + ++ +T + H + Q +R Sbjct: 246 AFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQER 305 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + + FRQGK LV +D+ +RG+DI +++I+++ P Sbjct: 306 NKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFP 344
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 73.6 bits (179), Expect = 3e-13 Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 5/154 (3%) Frame = +2 Query: 29 LPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKR- 205 +P Q +LFSAT P+ V + R I L Q+E EGIK F + + Sbjct: 233 MPKSCQLVLFSATFPTNVYDFAVRIAPGANEIRL--KQEELSVEGIKQFYMDCKDEDHKY 290 Query: 206 ---TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIAS-EALHGDISQHQRERTLN 373 L +L+T+ G++I+F + AD ++ +T ++LHG + R+RT++ Sbjct: 291 EVLVELYNLLTI----GQSIIFCAKRETADRIAQKMTQEGHKVDSLHGRLETADRDRTID 346 Query: 374 GFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 FR GK VL++T+V +RG+DI L+I+Y++P Sbjct: 347 AFRDGKSKVLISTNVIARGIDIQQVTLVINYDMP 380
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 73.6 bits (179), Expect = 3e-13 Identities = 58/204 (28%), Positives = 90/204 (44%), Gaps = 46/204 (22%) Frame = +2 Query: 2 EDVETILQQLP-AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFA 178 +++ I++ P RQ+MLFSATM V++L R L P ++LF Sbjct: 502 DELNEIVKSCPKGARQTMLFSATMTDDVEQLVRLSLKRP----------------VRLFV 545 Query: 179 IPLTTTSKRTI----------------------LSDLITVYAKGGK-------------- 250 P TT+K+ I + D + GG+ Sbjct: 546 DPKRTTAKKLIQEFVRVRGTGTGGVAGADGLSGIQDQPATWISGGRKSEDAQRPALLLSL 605 Query: 251 --------TIVFTRTKRDADEVSLAL-TTSIASEALHGDISQHQRERTLNGFRQGKFTVL 403 T++F R+K+ A ++ + +++ LHGD+SQ QR L FR GK L Sbjct: 606 CTRTFTSQTMIFVRSKKLAHQLKIVFGLLGLSAGELHGDLSQEQRIDALTDFRDGKTDFL 665 Query: 404 VATDVASRGLDIPNGDLIIHYELP 475 +ATD+ASRGLDI +I+Y++P Sbjct: 666 LATDLASRGLDIKGVQTVINYDMP 689
>DBP8_ASPFU (Q4WXW1) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 526 Score = 73.6 bits (179), Expect = 3e-13 Identities = 56/165 (33%), Positives = 82/165 (49%), Gaps = 8/165 (4%) Frame = +2 Query: 5 DVETILQQLP--AERQSMLFSATMPSWVKKLSR--RYLNNP--LTIDLVGDQDEKLAEGI 166 DVET L LP +ERQ++LF+AT+ V+ L R N P ++ + + + Sbjct: 265 DVETCLSALPPSSERQTLLFTATVTPEVRALKNMPRSANKPPVFVTEISTENQGTIPPTL 324 Query: 167 KLFAIPLTTTSKRTILSDLITVYAKGGK-TIVFTRTKRDADEVSLALTT-SIASEALHGD 340 K + + T + L L++ K IVF + AD + L S +LH Sbjct: 325 KQTYLKVPLTHREAFLHVLLSTEGNASKPAIVFCNHTKTADLLERMLRRLSHRVTSLHSL 384 Query: 341 ISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 + Q +R L FR +LVATDVASRGLDIP L+I+Y++P Sbjct: 385 LPQSERNANLARFRASAARILVATDVASRGLDIPTVSLVINYDVP 429
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 73.2 bits (178), Expect = 3e-13 Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 23/180 (12%) Frame = +2 Query: 5 DVETILQ--QLPAE--RQSMLFSATMPSWVKKLSRRYLNNP---LTIDLVG--------- 136 D+ETI+ +P + RQ+++FSAT P V++ +R +L + ID +G Sbjct: 513 DIETIVNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIGAANKCVLQE 572 Query: 137 ----DQDEKLAEGIKLFAIPLT--TTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSL 298 ++ EK + ++L I + TT K VY K KT+VF + AD ++ Sbjct: 573 FERCERSEKKDKLLELLGIDIDSYTTEKSA------EVYTK--KTMVFVSQRAMADTLAS 624 Query: 299 ALTTS-IASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 L+++ + + +HG Q +R L FR G VL+AT VA RGLDI D +I+Y++P Sbjct: 625 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 684
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 73.2 bits (178), Expect = 3e-13 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQD-EKLAEGIKLFA 178 + ++ IL LP RQ++LFSAT VK L+R L NP + + DQ+ E ++ + Sbjct: 211 KQIDNILGHLPPTRQTLLFSATQSDSVKDLARLSLANPKRVGISSDQELSATPESLEQYY 270 Query: 179 IPLTTTSKRTILSDLITVYAKGGKTIVFTRTK--RDADEVSLALTTSIASEALHGDISQH 352 I + K +L I + K + F+ K + A E L I+ L+G Q Sbjct: 271 IKIPLDEKLDVLWSFIKSHLKSKILVFFSSLKQVQYAYETFRTLQPGISLLKLYGRHKQT 330 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R T F Q + L ATD+ +RGLD P D ++ + P Sbjct: 331 SRMETTMKFSQAQHACLFATDIVARGLDFPAIDWVVQIDCP 371
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 73.2 bits (178), Expect = 3e-13 Identities = 40/157 (25%), Positives = 82/157 (52%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P E+Q M+FSAT+ ++ + R+++ +P+ + V D+ + G++ + + Sbjct: 209 DVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEV-FVDDETKLTLHGLQQYYVK 267 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRER 364 L + K L DL+ V I +R L + + + A+H ++Q +R Sbjct: 268 LKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLS 327 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F+ + +LVAT++ RG+DI +++ +Y++P Sbjct: 328 RYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMP 364
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 73.2 bits (178), Expect = 3e-13 Identities = 40/157 (25%), Positives = 82/157 (52%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P E+Q M+FSAT+ ++ + R+++ +P+ + V D+ + G++ + + Sbjct: 209 DVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEV-FVDDETKLTLHGLQQYYVK 267 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRER 364 L + K L DL+ V I +R L + + + A+H ++Q +R Sbjct: 268 LKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLS 327 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F+ + +LVAT++ RG+DI +++ +Y++P Sbjct: 328 RYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMP 364
>RHLB_VIBVY (Q7MGP7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 73.2 bits (178), Expect = 3e-13 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ + +++PA ER +MLFSAT+ V++L+ +++NP + V + ++K I+ Sbjct: 177 KDIRFLFRRMPAPQERLNMLFSATLSYRVQELAFEHMHNPEHV--VVEPEQKTGHRIQEE 234 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEAL-HGDISQH 352 + K +L LI + I+F TK + + L L GD+ Q Sbjct: 235 LFYPSNEDKMALLQTLIEEEWPD-RAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQK 293 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE+ L F QG +LVATDVA+RGL IP + +Y+LP Sbjct: 294 KREKILEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLP 334
>RHLB_VIBVU (Q8DDN6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 73.2 bits (178), Expect = 3e-13 Identities = 52/161 (32%), Positives = 85/161 (52%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ + +++PA ER +MLFSAT+ V++L+ +++NP + V + ++K I+ Sbjct: 177 KDIRFLFRRMPAPQERLNMLFSATLSYRVQELAFEHMHNPEHV--VVEPEQKTGHRIQEE 234 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEAL-HGDISQH 352 + K +L LI + I+F TK + + L L GD+ Q Sbjct: 235 LFYPSNEDKMALLQTLIEEEWPD-RAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQK 293 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +RE+ L F QG +LVATDVA+RGL IP + +Y+LP Sbjct: 294 KREKILEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLP 334
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 72.8 bits (177), Expect = 4e-13 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 9/162 (5%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNP---------LTIDLVGDQDEKLAEGIK 169 I + LP+ Q +LFSAT P V L+ + NP L +D + +G + Sbjct: 263 IKKYLPSSTQVVLFSATFPESVLDLAGKMCPNPNEIRLKANELNVDAITQLYMDCEDGEE 322 Query: 170 LFAIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQ 349 F + S TI S +I V + ++ R ++ +VSL LH D+S Sbjct: 323 KFKMLEELYSMLTIASSVIFVAQRSTANALYQRMSKNGHKVSL----------LHSDLSV 372 Query: 350 HQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R+R ++ FR G+ VL++T+V +RG+DI ++++Y+LP Sbjct: 373 DERDRLMDDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLP 414
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 72.8 bits (177), Expect = 4e-13 Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAI 181 E + I + LP Q ++ SAT+P V +++ ++ +P+ I + +DE GIK + + Sbjct: 187 EQIYEIYKHLPPSVQVVVVSATLPREVLEMTSKFTTDPVKI--LVKRDEISLSGIKQYYV 244 Query: 182 PLTTTS-KRTILSDL---ITVYAKGGKTIVFTRTKRD----ADEVSLALTTSIASEALHG 337 K L DL +T+ + ++F TK AD++ T +A +HG Sbjct: 245 QCEREDWKFDTLCDLYDNLTIT----QAVIFCNTKLKVNWLADQMKKQNFTVVA---MHG 297 Query: 338 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 D+ Q +R+ +N FR+G VL++TDV +RG+D+ L+I+Y+LP Sbjct: 298 DMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLVINYDLP 343
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 72.4 bits (176), Expect = 6e-13 Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 3/159 (1%) Frame = +2 Query: 8 VETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPL 187 ++ I+ LP RQ+MLFSAT VK L+R L NP I + + + F + + Sbjct: 206 LDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTV 265 Query: 188 TTTSKRTILSDLITVYAKGGKTIVF---TRTKRDADEVSLALTTSIASEALHGDISQHQR 358 T K IL I + K KTIVF + R E + I+ LHG Q R Sbjct: 266 PLTEKLDILFGFIRTHLK-FKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTR 324 Query: 359 ERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F + VL TD+ +RGLD P D +I + P Sbjct: 325 TEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAP 363
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 72.4 bits (176), Expect = 6e-13 Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPAE--RQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ + +++PA R +MLFSAT+ VK+L+ ++N+P ++ V + ++K I+ Sbjct: 177 KDIRFLFRRMPAPKARLNMLFSATLSYRVKELAFEHMNSPESV--VVEPNQKTGHLIQEE 234 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEAL-HGDISQH 352 + K +L LI + I+F TK +++ L L +GD+ Q Sbjct: 235 LFYPSNQEKMRLLQTLIEEEWPD-RAIIFANTKHRCEDIWGHLAADNHRVGLLNGDVPQK 293 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R R L F QG +LVATDVA+RGL IP + +Y+LP Sbjct: 294 KRVRILEQFTQGDIDILVATDVAARGLHIPQVTHVYNYDLP 334
>DBP5_CANGA (Q6FKN8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 504 Score = 72.4 bits (176), Expect = 6e-13 Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 11/160 (6%) Frame = +2 Query: 29 LPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTTSKR- 205 LP + Q +LFSAT VK +++ + N T++L ++E + IK + + + Sbjct: 283 LPKDTQLVLFSATFADAVKAYAQKVIPNANTLEL--QRNEVNVKAIKQLYMDCNDEAHKY 340 Query: 206 ----------TILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQ 355 TI S +I V K +++ + K + +VS+ LH D+ + Sbjct: 341 EVLCELYGLLTIGSSIIFVAKKDTANLLYGKLKHEGHQVSI----------LHSDLRTDE 390 Query: 356 RERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 R+R ++ FR+G+ VL+ T+V +RG+DIP+ ++++Y+LP Sbjct: 391 RDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLP 430
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 72.4 bits (176), Expect = 6e-13 Identities = 40/157 (25%), Positives = 82/157 (52%) Frame = +2 Query: 5 DVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIP 184 DV+ I + P E+Q M+FSAT+ ++ + R+++ +P+ + V D+ + G++ + + Sbjct: 209 DVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEV-FVDDETKLTLHGLQQYYVK 267 Query: 185 LTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHGDISQHQRER 364 L + K L DL+ V I +R L + + + A+H ++Q +R Sbjct: 268 LKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLS 327 Query: 365 TLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 F+ + +LVAT++ RG+DI +++ +Y++P Sbjct: 328 RYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMP 364
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 72.0 bits (175), Expect = 7e-13 Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%) Frame = +2 Query: 2 EDVETILQQLP--AERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ +LQ++P ++R ++LFSAT+ V++L+ ++N P +++ E L + Sbjct: 176 DDIRYLLQKMPDPSKRLNLLFSATLSYRVQELAYEHMNAPTKLEV-----EPLQKTATRV 230 Query: 176 AIPLTTTSKRTILSDLITVYAKG--GKTIVFTRTKRDADEV-SLALTTSIASEALHGDIS 346 L SK L+T+ + K IVF TK ++V + + L GD+ Sbjct: 231 TEELFYPSKPEKFPLLLTLIEEDWPDKAIVFANTKHGCEKVHGWLVANEHRAGLLTGDVP 290 Query: 347 QHQRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 Q +R R L F +GK LVATDVA+RGL IP + +++LP Sbjct: 291 QKKRLRILEDFAEGKLDFLVATDVAARGLHIPEVTHVYNFDLP 333
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 72.0 bits (175), Expect = 7e-13 Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 3/161 (1%) Frame = +2 Query: 2 EDVETILQQLPA--ERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLF 175 +D+ + +++P +R +MLFSAT+ V++L+ ++N+P+ +++ +EK ++ IK Sbjct: 177 KDIRFLFRRMPNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIA--PEEKTSKNIKEE 234 Query: 176 AIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEV-SLALTTSIASEALHGDISQH 352 + K +L LI K IVF+ TK + + S L GD+ Q Sbjct: 235 IFYPSQEDKMRLLLTLIEEDWPE-KAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQK 293 Query: 353 QRERTLNGFRQGKFTVLVATDVASRGLDIPNGDLIIHYELP 475 +R R L F QG+ +LVATDVA+RGL I + + +Y+LP Sbjct: 294 KRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLP 334
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 71.6 bits (174), Expect = 1e-12 Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 37/190 (19%) Frame = +2 Query: 17 ILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLFAIPLTTT 196 IL LP RQ++LFSAT+P + ++ L +P+ + L D + K++ ++ + T Sbjct: 237 ILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRL--DVESKVSADLQSAFFSVKTA 294 Query: 197 SKRT----ILSDLITVYAKGG--------------------------------KTIVFTR 268 + IL D+I + K T+VF Sbjct: 295 EREAALLCILQDIIKLPLKDNVRPREIGNVNNPKKRKRALELALKGSESGSPDSTLVFVP 354 Query: 269 TKRDADEVS-LALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPN 445 TK + VS L + + ++G + Q R +N FR GK +LV TDVASRG+DIP Sbjct: 355 TKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRGIDIPL 414 Query: 446 GDLIIHYELP 475 +I+Y+ P Sbjct: 415 LANVINYDFP 424
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 71.6 bits (174), Expect = 1e-12 Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 50/208 (24%) Frame = +2 Query: 2 EDVETILQQLPAERQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL--F 175 E + +L LP+ RQ++LFSAT+P + + ++ L++P+ + L D + KL E +++ F Sbjct: 265 EQMNELLASLPSNRQTLLFSATLPKTLVEFAKAGLHDPILVRL--DAETKLPEHLEMTFF 322 Query: 176 AI-------------------PLTTTSKRTILSDLITVYAKGGK---------------- 250 A+ P T + L L G+ Sbjct: 323 AVKENQRDACLAFILKEVIQMPFATPEQLKELERLDERAIDDGERDEDRKQKRPKFKKER 382 Query: 251 ------------TIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQGK 391 TIVF TK + V + L T A ++G + QH R+ L FR GK Sbjct: 383 LPPAHQLPSEKSTIVFCPTKHHVEYVIVLLQTLGYAVSYIYGTLDQHARKNQLYRFRTGK 442 Query: 392 FTVLVATDVASRGLDIPNGDLIIHYELP 475 ++LV TDVA+RG+D+P +I+Y LP Sbjct: 443 TSILVVTDVAARGIDVPVLANVINYSLP 470
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-) (DEAD| box protein 23) Length = 820 Score = 71.2 bits (173), Expect = 1e-12 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNPLTIDL--VGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+++F+ATMP V++L+R YL P + + G E++ + + L ++ + KR Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFL----MSESEKR--- 652 Query: 215 SDLITVYAKG--GKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQ 385 L+ + +G I+F K+ D ++ +L + LHG Q QRE L+ + Sbjct: 653 KKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 712 Query: 386 GKFTVLVATDVASRGLDIPNGDLIIHYEL 472 G +LVATDVA RG+DI + ++++Y++ Sbjct: 713 GAKDILVATDVAGRGIDIQDVSMVVNYDM 741
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-) (DEAD| box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 71.2 bits (173), Expect = 1e-12 Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 5/149 (3%) Frame = +2 Query: 41 RQSMLFSATMPSWVKKLSRRYLNNPLTIDL--VGDQDEKLAEGIKLFAIPLTTTSKRTIL 214 RQ+++F+ATMP V++L+R YL P + + G E++ + + L ++ + KR Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFL----MSESEKR--- 652 Query: 215 SDLITVYAKG--GKTIVFTRTKRDADEVSLALTT-SIASEALHGDISQHQRERTLNGFRQ 385 L+ + +G I+F K+ D ++ +L + LHG Q QRE L+ + Sbjct: 653 KKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKA 712 Query: 386 GKFTVLVATDVASRGLDIPNGDLIIHYEL 472 G +LVATDVA RG+DI + ++++Y++ Sbjct: 713 GAKDILVATDVAGRGIDIQDVSMVVNYDM 741 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,253,850 Number of Sequences: 219361 Number of extensions: 1244583 Number of successful extensions: 5225 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 4585 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4795 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
