ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet02a10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB164680.1| Hordeum vulgare HVD1 mRNA for ATP-dependent RNA helicase, complete cds Length = 2799 Score = 938 bits (473), Expect = 0.0 Identities = 476/477 (99%) Strand = Plus / Plus Query: 1 agaagatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 agaagatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctc 874 Query: 61 tgcgaccatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 tgcgaccatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgac 934 Query: 121 aattgatttggttggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 aattgatttggttggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctat 994 Query: 181 tccactcacaacgacttcaaagcgcaccattcttagtgatctcattacggtatatgcaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 tccactcacaacgacttcaaagcgcaccattcttagtgatctcattacggtatatgcaaa 1054 Query: 241 gggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatcattagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatcattagc 1114 Query: 301 attgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatcagcgtga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 attgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatcagcgtga 1174 Query: 361 gaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccactgatgttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1175 gaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccactgatgttgc 1234 Query: 421 ttctcgtggtcttgatatacccaatggtgatttgattattcattatgagttgccaaa 477 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1235 ttctcgtggtcttgatatacccaatgttgatttgattattcattatgagttgccaaa 1291
>dbj|AK065849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E01, full insert sequence Length = 2728 Score = 504 bits (254), Expect = e-139 Identities = 416/470 (88%) Strand = Plus / Plus Query: 5 gatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctctgcg 64 ||||||||||| ||||| |||||||| |||||||| | ||||||||||| |||||||| Sbjct: 837 gatgtggaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgcc 896 Query: 65 accatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgacaatt 124 ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 897 accatgcctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaatt 956 Query: 125 gatttggttggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctattcca 184 || ||||| |||||||||||||||||| | ||||||||||||||||| | |||||| || Sbjct: 957 gacttggtcggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccg 1016 Query: 185 ctcacaacgacttcaaagcgcaccattcttagtgatctcattacggtatatgcaaagggt 244 |||||| | || || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 1017 ctcacatctacatcgaagcgcactgttcttagtgatctcattacggtgtatgcaaagggt 1076 Query: 245 gggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatcattagcattg 304 |||||||| ||||| ||||| ||| ||| |||||||||||||||||||||||||| || Sbjct: 1077 gggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggtatcattagcactg 1136 Query: 305 acaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatcagcgtgagagg 364 |||| ||||||||| || ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1137 acaaacagtattgcttcggaggcactgcatggtgatatttcacaacatcagcgtgagagg 1196 Query: 365 acattaaatggtttccgccaagggaaatttactgtgcttgtggccactgatgttgcttct 424 ||| |||||||||| || ||||||||||||||||| || || || || ||||||||| | Sbjct: 1197 acactaaatggttttcgtcaagggaaatttactgttctcgtagcaaccgatgttgctgcc 1256 Query: 425 cgtggtcttgatatacccaatggtgatttgattattcattatgagttgcc 474 ||||||||||||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 1257 cgtggtcttgatataccgaatgttgatttgattatccattatgaattgcc 1306
>ref|NM_185120.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2719 Score = 496 bits (250), Expect = e-137 Identities = 415/470 (88%) Strand = Plus / Plus Query: 5 gatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctctgcg 64 ||||||||||| ||||| |||||||| |||||||| | ||||||||||| |||||||| Sbjct: 814 gatgtggaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgcc 873 Query: 65 accatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgacaatt 124 ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 874 accatgcctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaatt 933 Query: 125 gatttggttggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctattcca 184 || ||||| |||||||||||||||||| | ||||||||||||||||| | |||||| || Sbjct: 934 gacttggtcggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccg 993 Query: 185 ctcacaacgacttcaaagcgcaccattcttagtgatctcattacggtatatgcaaagggt 244 |||||| | || || |||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 994 ctcacatctacatcgaagcgcactgttcttagtgatctcattacggtgtatgcaaagggt 1053 Query: 245 gggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatcattagcattg 304 |||||||| ||||| ||||| ||| ||| |||||||||||||||||||||||||| || Sbjct: 1054 gggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggtatcattagcactg 1113 Query: 305 acaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatcagcgtgagagg 364 |||| ||||||||| || ||||| || ||||||||||||||||| ||||||||||||||| Sbjct: 1114 acaaacagtattgcttcggaggcactgcatggtgatatttcacagcatcagcgtgagagg 1173 Query: 365 acattaaatggtttccgccaagggaaatttactgtgcttgtggccactgatgttgcttct 424 ||| |||||||||| || ||||||||||||||||| || || || || ||||||||| | Sbjct: 1174 acactaaatggttttcgtcaagggaaatttactgttctcgtagcaaccgatgttgctgcc 1233 Query: 425 cgtggtcttgatatacccaatggtgatttgattattcattatgagttgcc 474 ||||||||||||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 1234 cgtggtcttgatataccgaatgttgatttgattatccattatgaattgcc 1283
>gb|AY105041.1| Zea mays PCO121445 mRNA sequence Length = 1788 Score = 452 bits (228), Expect = e-124 Identities = 414/476 (86%) Strand = Plus / Plus Query: 2 gaagatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctct 61 |||||||||||||||||||| |||||||| || || || | ||||||||||| |||||| Sbjct: 135 gaagatgtggaaacaatattacaacagcttcctgcggacaggcaaagcatgctgttctct 194 Query: 62 gcgaccatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgaca 121 ||||| |||||||| |||||||||||| | || |||||||||||||| ||||||||||| Sbjct: 195 gcgacgatgcctagctgggtgaagaaactatccaggcggtacttgaacaatcctttgacg 254 Query: 122 attgatttggttggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctatt 181 ||||| |||||||| ||||||||||||||| | ||||||||||||||||| ||| || Sbjct: 255 attgacttggttggtgatcaagatgaaaaacttgctgaaggaatcaaacttcatgccatc 314 Query: 182 ccactcacaacgacttcaaagcgcaccattcttagtgatctcattacggtatatgcaaag 241 ||||||||||| || |||||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 315 ccactcacaacaacatcaaagcgtaccattcttagtgatctaatcacggtttatgcaaag 374 Query: 242 ggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatcattagca 301 ||||||||||| || ||||||||||| ||||| |||||||| ||||||||||| ||| Sbjct: 375 ggtgggaaaaccatagttttcactcgcacaaagaaagatgcagatgaggtatcattggca 434 Query: 302 ttgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatcagcgtgag 361 |||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 435 ctgacaaacagtattgcttctgaggcacttcatggtgatatttcacagcatcagcgtgaa 494 Query: 362 aggacattaaatggtttccgccaagggaaatttactgtgcttgtggccactgatgttgct 421 |||||| ||||||| ||||| ||||||||||||||||| || || || || |||||||| Sbjct: 495 aggacactaaatggattccgtcaagggaaatttactgttctagtagcaacagatgttgcg 554 Query: 422 tctcgtggtcttgatatacccaatggtgatttgattattcattatgagttgccaaa 477 | || |||||||||||||| |||| |||||||||||| ||||| || |||||||| Sbjct: 555 gcccgcggtcttgatataccaaatgttgatttgattatccattacgaattgccaaa 610
>dbj|AK062046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-A10, full insert sequence Length = 1728 Score = 285 bits (144), Expect = 6e-74 Identities = 261/300 (87%) Strand = Plus / Plus Query: 175 tgctattccactcacaacgacttcaaagcgcaccattcttagtgatctcattacggtata 234 |||||| || |||||| | || || |||||||| |||||||||||||||||||||| || Sbjct: 9 tgctatcccgctcacatctacatcgaagcgcactgttcttagtgatctcattacggtgta 68 Query: 235 tgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggtatc 294 |||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||| Sbjct: 69 tgcaaagggtgggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggtatc 128 Query: 295 attagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacatca 354 ||||||| |||||| ||||||||| || ||||| || ||||||||||||||||| ||||| Sbjct: 129 attagcactgacaaacagtattgcttcggaggcactgcatggtgatatttcacagcatca 188 Query: 355 gcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccactga 414 ||||| ||||||| |||||||||| || ||||||||||||||||| || || || || || Sbjct: 189 gcgtgggaggacactaaatggttttcgtcaagggaaatttactgttctcgtagcaaccga 248 Query: 415 tgttgcttctcgtggtcttgatatacccaatggtgatttgattattcattatgagttgcc 474 ||||||| | |||||||||||| |||| |||| |||||||||||| |||||||| ||||| Sbjct: 249 tgttgctgcccgtggtcttgatgtaccgaatgttgatttgattatccattatgaattgcc 308
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 234 bits (118), Expect = 2e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 |||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||| Sbjct: 34464990 tatgcaaagggtgggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggta 34465049 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 ||||||||| |||||| ||||||||| || ||||| || ||||||||||||||||| ||| Sbjct: 34465050 tcattagcactgacaaacagtattgcttcggaggcactgcatggtgatatttcacagcat 34465109 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||||||||||||||| |||||||||| || ||||||||||||||||| || || || || Sbjct: 34465110 cagcgtgagaggacactaaatggttttcgtcaagggaaatttactgttctcgtagcaacc 34465169 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttg 454 ||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 34465170 gatgttgctgcccgtggtcttgatataccgaatgttgatttg 34465211 Score = 151 bits (76), Expect = 2e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 5 gatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctctgcg 64 ||||||||||| ||||| |||||||| |||||||| | ||||||||||| |||||||| Sbjct: 34464048 gatgtggaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgcc 34464107 Query: 65 accatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgacaatt 124 ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 34464108 accatgcctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaatt 34464167 Query: 125 gatttggt 132 || ||||| Sbjct: 34464168 gacttggt 34464175 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 134 ggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctattccactcacaacg 193 |||||||||||||||||| | ||||||||||||||||| | |||||| || |||||| | Sbjct: 34464586 ggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccgctcacatct 34464645 Query: 194 acttcaaagcgcaccattcttagtgatctcattacggtat 233 || || |||||||| |||||||||||||||||||||||| Sbjct: 34464646 acatcgaagcgcactgttcttagtgatctcattacggtat 34464685
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 234 bits (118), Expect = 2e-58 Identities = 196/222 (88%) Strand = Plus / Minus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 |||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||| Sbjct: 61177 tatgcaaagggtgggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggta 61118 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 ||||||||| |||||| ||||||||| || ||||| || ||||||||||||||||| ||| Sbjct: 61117 tcattagcactgacaaacagtattgcttcggaggcactgcatggtgatatttcacagcat 61058 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||||||||||||||| |||||||||| || ||||||||||||||||| || || || || Sbjct: 61057 cagcgtgagaggacactaaatggttttcgtcaagggaaatttactgttctcgtagcaacc 60998 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttg 454 ||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 60997 gatgttgctgcccgtggtcttgatataccgaatgttgatttg 60956 Score = 151 bits (76), Expect = 2e-33 Identities = 115/128 (89%) Strand = Plus / Minus Query: 5 gatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctctgcg 64 ||||||||||| ||||| |||||||| |||||||| | ||||||||||| |||||||| Sbjct: 62119 gatgtggaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgcc 62060 Query: 65 accatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgacaatt 124 ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 62059 accatgcctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaatt 62000 Query: 125 gatttggt 132 || ||||| Sbjct: 61999 gacttggt 61992 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 134 ggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctattccactcacaacg 193 |||||||||||||||||| | ||||||||||||||||| | |||||| || |||||| | Sbjct: 61581 ggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccgctcacatct 61522 Query: 194 acttcaaagcgcaccattcttagtgatctcattacggtat 233 || || |||||||| |||||||||||||||||||||||| Sbjct: 61521 acatcgaagcgcactgttcttagtgatctcattacggtat 61482
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 234 bits (118), Expect = 2e-58 Identities = 196/222 (88%) Strand = Plus / Plus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 |||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||| Sbjct: 34555062 tatgcaaagggtgggaaaaccattgtgttcaccaagacgaaaagggatgcagacgaggta 34555121 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 ||||||||| |||||| ||||||||| || ||||| || ||||||||||||||||| ||| Sbjct: 34555122 tcattagcactgacaaacagtattgcttcggaggcactgcatggtgatatttcacagcat 34555181 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||||||||||||||| |||||||||| || ||||||||||||||||| || || || || Sbjct: 34555182 cagcgtgagaggacactaaatggttttcgtcaagggaaatttactgttctcgtagcaacc 34555241 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttg 454 ||||||||| | ||||||||||||||||| |||| ||||||| Sbjct: 34555242 gatgttgctgcccgtggtcttgatataccgaatgttgatttg 34555283 Score = 151 bits (76), Expect = 2e-33 Identities = 115/128 (89%) Strand = Plus / Plus Query: 5 gatgtggaaacaatattgcaacagctgccagctgaacgacaaagcatgcttttctctgcg 64 ||||||||||| ||||| |||||||| |||||||| | ||||||||||| |||||||| Sbjct: 34554120 gatgtggaaacgatattacaacagctaccagctgagaggcaaagcatgctcttctctgcc 34554179 Query: 65 accatgcctagttgggtgaagaaattgtctaggcggtacttgaataatcctttgacaatt 124 ||||||||| |||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 34554180 accatgcctggttgggtgaagaaattatctaggcgatacttgaacaatcctttgacaatt 34554239 Query: 125 gatttggt 132 || ||||| Sbjct: 34554240 gacttggt 34554247 Score = 103 bits (52), Expect = 5e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 134 ggcgatcaagatgaaaaattagctgaaggaatcaaactctttgctattccactcacaacg 193 |||||||||||||||||| | ||||||||||||||||| | |||||| || |||||| | Sbjct: 34554658 ggcgatcaagatgaaaaacttgctgaaggaatcaaactttatgctatcccgctcacatct 34554717 Query: 194 acttcaaagcgcaccattcttagtgatctcattacggtat 233 || || |||||||| |||||||||||||||||||||||| Sbjct: 34554718 acatcgaagcgcactgttcttagtgatctcattacggtat 34554757
>dbj|AP004520.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT05P01, TM0048, complete sequence Length = 110811 Score = 155 bits (78), Expect = 2e-34 Identities = 186/222 (83%) Strand = Plus / Minus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 ||||||||||||||||| |||||||||||||| ||||||||| ||||| || || ||| Sbjct: 5044 tatgcaaagggtgggaagactattgttttcacgcggacaaaaaaagatgctgatgaagta 4985 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 ||||| |||| |||| ||||| || ||||| || || ||||||||||| || || ||| Sbjct: 4984 tcattgtcattaacaaatagtatagcttctgaagcactgcatggtgatatctctcagcat 4925 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||| | ||||| || || ||||||||||| ||||| ||||| || |||||||| |||||| Sbjct: 4924 cagagagagagaacgttgaatggtttccggcaaggaaaattcacagtgcttgttgccact 4865 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttg 454 |||||||| |||||||| |||||||| || |||| ||||||| Sbjct: 4864 gatgttgcctctcgtggacttgatattcctaatgttgatttg 4823 Score = 63.9 bits (32), Expect = 4e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 49 catgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcggtacttgaa 108 ||||||||| ||||| |||||||| ||||||||||||||||||| || || ||||| Sbjct: 6263 catgcttttttctgcaaccatgccgggttgggtgaagaaattgtcaagaaaatatttgaa 6204 Query: 109 taatcctttgacaattgatttggt 132 || || ||||||||||||||||| Sbjct: 6203 caaaccattgacaattgatttggt 6180
>dbj|AB236786.1| Trifolium pratense RNA for hypothetical protein, partial cds, clone: C1833 Length = 1606 Score = 143 bits (72), Expect = 6e-31 Identities = 195/236 (82%) Strand = Plus / Plus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 |||| |||||||||||| |||||||||||||| |||||||| ||||||| || || || Sbjct: 386 tatggaaagggtgggaagactattgttttcacaaggacaaaaagggatgctgatgaaata 445 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 |||| ||||||||| ||||| || ||| | || || ||||||||||| || || || Sbjct: 446 tcatattcattgacaagtagtatagcttctaaagcactgcatggtgatatctctcagtat 505 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||| | ||||| ||||| ||||||| || ||||||| ||| || |||||||| || ||| Sbjct: 506 cagagagagagaacattggatggttttcggcaagggagattcacagtgcttgttgctact 565 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttgattattcattatga 468 ||||||||||||||||| || ||||| ||||||| |||||||||||| |||||||| Sbjct: 566 gatgttgcttctcgtggactagatattcccaatgttgatttgattatacattatga 621 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 50 atgcttttctctgcgaccatgcctagttgggtgaagaaattgtc 93 |||||||||||||| |||||||| ||||||| ||||| ||||| Sbjct: 203 atgcttttctctgcaaccatgccgggttgggtcaagaagttgtc 246
>gb|AC149038.2| Medicago truncatula chromosome 7 BAC clone mth2-29a5, complete sequence Length = 136566 Score = 131 bits (66), Expect = 2e-27 Identities = 183/222 (82%) Strand = Plus / Minus Query: 233 tatgcaaagggtgggaaaactattgttttcactcggacaaaacgggatgcagacgaggta 292 ||||||||||||||||| ||||| ||||| || | ||||||| | ||||| || || ||| Sbjct: 69556 tatgcaaagggtgggaagactatagtttttacgcagacaaaaagagatgctgatgaagta 69497 Query: 293 tcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgatatttcacaacat 352 ||||| ||||| |||| ||||| | ||||| || || ||||||||||| || || || Sbjct: 69496 tcattggcattaacaaatagtatcacttctgaagcactgcatggtgatatatctcagcac 69437 Query: 353 cagcgtgagaggacattaaatggtttccgccaagggaaatttactgtgcttgtggccact 412 ||| | || || ||||| ||||||||| | ||||| |||||||| |||||||| || ||| Sbjct: 69436 cagagagaaagaacattgaatggtttcagacaaggaaaatttacagtgcttgttgcaact 69377 Query: 413 gatgttgcttctcgtggtcttgatatacccaatggtgatttg 454 |||||||| |||||||| |||||||| ||||||| ||||||| Sbjct: 69376 gatgttgcatctcgtggacttgatattcccaatgttgatttg 69335 Score = 99.6 bits (50), Expect = 8e-18 Identities = 77/86 (89%) Strand = Plus / Minus Query: 47 agcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcggtacttg 106 ||||||||||| ||||| ||||||||||||||||||||||||||| | ||| |||||| Sbjct: 70449 agcatgcttttttctgcaaccatgcctagttgggtgaagaaattggccaggaaatacttg 70390 Query: 107 aataatcctttgacaattgatttggt 132 || ||||| ||||||||||||||||| Sbjct: 70389 aacaatccgttgacaattgatttggt 70364
>ref|NM_147920.2| Arabidopsis thaliana EMB1138; ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G26742 (EMB1138) transcript variant AT5G26742.1 mRNA, complete cds Length = 2244 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 850 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 909 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 910 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 969 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 970 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1029 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1030 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1089 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1090 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1149 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1150 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1209 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1210 ttagttgccactgatgttgcatctcgtggacttga 1244
>ref|NM_001036866.1| Arabidopsis thaliana EMB1138; ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT5G26742 (EMB1138) transcript variant AT5G26742.2 mRNA, complete cds Length = 2910 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 959 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 1018 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 1019 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1078 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1079 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1138 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1139 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1198 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1199 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1258 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1259 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1318 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1319 ttagttgccactgatgttgcatctcgtggacttga 1353
>gb|BT000713.1| Arabidopsis thaliana clone RAFL09-89-I07 (R19812) unknown protein (At5g26742) mRNA, complete cds Length = 2786 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 915 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 974 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 975 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1034 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1035 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1094 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1095 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1154 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1155 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1214 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1215 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1274 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1275 ttagttgccactgatgttgcatctcgtggacttga 1309
>gb|AY123000.1| Arabidopsis thaliana unknown protein (At5g26742) mRNA, complete cds Length = 2278 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 850 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 909 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 910 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 969 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 970 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1029 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1030 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1089 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1090 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1149 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1150 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1209 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1210 ttagttgccactgatgttgcatctcgtggacttga 1244
>gb|AY091068.1| Arabidopsis thaliana unknown protein (At5g26742) mRNA, complete cds Length = 2826 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 929 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 988 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 989 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1048 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1049 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1108 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1109 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1168 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1169 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1228 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1229 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1288 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1289 ttagttgccactgatgttgcatctcgtggacttga 1323
>gb|AY080625.1| Arabidopsis thaliana unknown protein (At5g26742) mRNA, complete cds Length = 2744 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 911 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 970 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 971 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1030 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1031 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1090 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1091 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1150 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1151 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1210 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1211 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1270 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1271 ttagttgccactgatgttgcatctcgtggacttga 1305
>emb|AJ010457.1|ATH010457 Arabidopsis thaliana mRNA for DEAD box RNA helicase,RH3 Length = 2749 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 907 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 966 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 967 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1026 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1027 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1086 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1087 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1146 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1147 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1206 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1207 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1266 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1267 ttagttgccactgatgttgcatctcgtggacttga 1301
>gb|AY102126.1| Arabidopsis thaliana At5g26743 mRNA, complete cds Length = 2815 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 963 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 1022 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 1023 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1082 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1083 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1142 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1143 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1202 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1203 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1262 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1263 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1322 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1323 ttagttgccactgatgttgcatctcgtggacttga 1357
>gb|AY094485.1| Arabidopsis thaliana At5g26752 mRNA, complete cds Length = 2764 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 957 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 1016 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 1017 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1076 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1077 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1136 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1137 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1196 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1197 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1256 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1257 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1316 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1317 ttagttgccactgatgttgcatctcgtggacttga 1351
>gb|BT004533.1| Arabidopsis thaliana At5g26743 gene, complete cds Length = 2244 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 850 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 909 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 910 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 969 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 970 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1029 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1030 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1089 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1090 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1149 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1150 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1209 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1210 ttagttgccactgatgttgcatctcgtggacttga 1244
>gb|BT002456.1| Arabidopsis thaliana Unknown protein (At5g26742) mRNA, complete cds Length = 2761 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 940 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 999 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 1000 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1059 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1060 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1119 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1120 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1179 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1180 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1239 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1240 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1299 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1300 ttagttgccactgatgttgcatctcgtggacttga 1334
>gb|BT002289.1| Arabidopsis thaliana At5g26752 mRNA, complete cds Length = 2247 Score = 77.8 bits (39), Expect = 3e-11 Identities = 306/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 850 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 909 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 910 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 969 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 970 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1029 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || || |||||||| || | || ||| | ||| Sbjct: 1030 cttattacagtgtatgcgaagggtggcaagaccattgtttttacccaaactaaaagagat 1089 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1090 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1149 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1150 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1209 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1210 ttagttgccactgatgttgcatctcgtggacttga 1244
>gb|AY128278.1| Arabidopsis thaliana At5g26740 mRNA, complete cds Length = 2779 Score = 69.9 bits (35), Expect = 7e-09 Identities = 305/395 (77%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaaattgtctaggcgg 100 |||||||| ||||||||||| || || ||||||| |||||| ||||| ||| | ||| | Sbjct: 954 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaagttggcgaggaag 1013 Query: 101 tacttgaataatcctttgacaattgatttggttggcgatcaagatgaaaaattagctgaa 160 ||| | | ||||| |||| |||||| ||||||| || |||||||| || | || || Sbjct: 1014 taccttgacaatcccttgaatattgatctggttggagaccaagatgagaagctcgcagag 1073 Query: 161 ggaatcaaactctttgctattccactcacaacgacttcaaagcgcaccattcttagtgat 220 || |||||||| | ||| || || |||| |||| ||||| ||||| ||||| || || Sbjct: 1074 ggtatcaaactttatgcaatcgcaaccacatcgacatcaaaacgcactattctaagcgac 1133 Query: 221 ctcattacggtatatgcaaagggtgggaaaactattgttttcactcggacaaaacgggat 280 || ||||| || ||||| |||||||| || | |||||||| || | || ||| | ||| Sbjct: 1134 cttattacagtgtatgcgaagggtggcaagaacattgtttttacccaaactaaaagagat 1193 Query: 281 gcagacgaggtatcattagcattgacaaccagtattgcgtctgaggcgcttcatggtgat 340 |||||||| || || | |||||| ||| |||||| || | || || |||||||| ||| Sbjct: 1194 gcagacgaagtttctcttgcattgtcaaacagtatagctaccgaagcacttcatggagat 1253 Query: 341 atttcacaacatcagcgtgagaggacattaaatggtttccgccaagggaaatttactgtg 400 || || || ||||| | ||||| ||| | |||| |||||| ||||||||||| || || Sbjct: 1254 atatctcagcatcaaagagagagaacactcaatgctttccgtcaagggaaattcaccgta 1313 Query: 401 cttgtggccactgatgttgcttctcgtggtcttga 435 | || |||||||||||||| |||||||| ||||| Sbjct: 1314 ttagttgccactgatgttgcatctcgtggacttga 1348
>ref|XM_503463.1| Yarrowia lipolytica CLIB122, YALI0E02552g predicted mRNA Length = 1329 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatat 438 |||||||||||||||||||||||||| ||||||||||| Sbjct: 907 cttgtggccactgatgttgcttctcgaggtcttgatat 944
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatat 438 |||||||||||||||||||||||||| ||||||||||| Sbjct: 281843 cttgtggccactgatgttgcttctcgaggtcttgatat 281880
>gb|AF058914.1|F21E10 Arabidopsis thaliana BAC F21E10, complete sequence Length = 111767 Score = 54.0 bits (27), Expect = 4e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 329 cttcatggtgatatttcacaacatcagcgtgagaggacattaaatggtttccgccaaggg 388 |||||||| ||||| || || ||||| | ||||| ||| | |||| |||||| |||||| Sbjct: 111399 cttcatggagatatatctcagcatcaaagagagagaacactcaatgctttccgtcaaggg 111458 Query: 389 aaatttactgtgcttgtggccactgatgttgcttctcgtggtcttga 435 ||||| || || | || |||||||||||||| |||||||| ||||| Sbjct: 111459 aaattcaccgtattagttgccactgatgttgcatctcgtggacttga 111505 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaa 87 |||||||| ||||||||||| || || ||||||| |||||| ||||| Sbjct: 110916 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaa 110962
>gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone T7I7, from chromosome 5, complete sequence Length = 22832 Score = 54.0 bits (27), Expect = 4e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 329 cttcatggtgatatttcacaacatcagcgtgagaggacattaaatggtttccgccaaggg 388 |||||||| ||||| || || ||||| | ||||| ||| | |||| |||||| |||||| Sbjct: 21200 cttcatggagatatatctcagcatcaaagagagagaacactcaatgctttccgtcaaggg 21141 Query: 389 aaatttactgtgcttgtggccactgatgttgcttctcgtggtcttga 435 ||||| || || | || |||||||||||||| |||||||| ||||| Sbjct: 21140 aaattcaccgtattagttgccactgatgttgcatctcgtggacttga 21094 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 41 cgacaaagcatgcttttctctgcgaccatgcctagttgggtgaagaa 87 |||||||| ||||||||||| || || ||||||| |||||| ||||| Sbjct: 21683 cgacaaagtatgcttttctcagcaactatgcctacttgggttaagaa 21637
>ref|XM_421338.1| PREDICTED: Gallus gallus similar to ATP-dependent RNA helicase DDX24 (DEAD-box protein 24) (LOC423429), mRNA Length = 3108 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 413 gatgttgcttctcgtggtcttgatatacccaatg 446 ||||||||| |||||||||||||||| ||||||| Sbjct: 2509 gatgttgctgctcgtggtcttgatattcccaatg 2542
>ref|XM_505988.1| Yarrowia lipolytica CLIB122, YALI0F28391g predicted mRNA Length = 1728 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 397 tgtgcttgtggccactgatgttgcttctcgtggtcttgatat 438 ||||||||| ||||||||||||||| ||| ||||||||||| Sbjct: 1449 tgtgcttgttgccactgatgttgctggtcgaggtcttgatat 1490
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 397 tgtgcttgtggccactgatgttgcttctcgtggtcttgatat 438 ||||||||| ||||||||||||||| ||| ||||||||||| Sbjct: 3612037 tgtgcttgttgccactgatgttgctggtcgaggtcttgatat 3611996
>ref|NM_113131.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G22330 mRNA, complete cds Length = 2097 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| |||||||| ||| Sbjct: 1229 cttgttgcgactgatgttgctgcccgtggacttgatgtacctaatgtcgatttgatcatt 1288 Query: 461 cattatgag 469 || |||||| Sbjct: 1289 cactatgag 1297 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| ||||||||||||||||| ||||| Sbjct: 928 gtacctgaataatcctttgacagttgat 955
>ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H RNA helicase (Tb09.211.3510) partial mRNA Length = 2208 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacccaa 444 ||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 1777 gtggcaactgacgttgcttctcgcggtcttgatatccccaa 1817
>ref|XM_385512.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05336.1) partial mRNA Length = 2352 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||||||||| Sbjct: 1687 actgatgttgctgctcgtggtcttgatat 1715
>gb|AY093256.1| Arabidopsis thaliana DEAD-Box RNA helicase-like protein (At3g22320) mRNA, complete cds Length = 1925 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| |||||||| ||| Sbjct: 1204 cttgttgcgactgatgttgctgcccgtggacttgatgtacctaatgtcgatttgatcatt 1263 Query: 461 cattatgag 469 || |||||| Sbjct: 1264 cactatgag 1272 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| ||||||||||||||||| ||||| Sbjct: 903 gtacctgaataatcctttgacagttgat 930
>gb|AY062502.1| Arabidopsis thaliana DEAD-Box RNA helicase-like protein (At3g22320; MCB17.5) mRNA, complete cds Length = 2052 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| |||||||| ||| Sbjct: 1229 cttgttgcgactgatgttgctgcccgtggacttgatgtacctaatgtcgatttgatcatt 1288 Query: 461 cattatgag 469 || |||||| Sbjct: 1289 cactatgag 1297 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| ||||||||||||||||| ||||| Sbjct: 928 gtacctgaataatcctttgacagttgat 955
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttga 435 |||||||| || |||||||||||||||||||| Sbjct: 778700 gtggccaccgacgttgcttctcgtggtcttga 778731
>ref|XM_572889.1| Cryptococcus neoformans var. neoformans JEC21 ATP-dependent RNA helicase (CNI02850) partial mRNA Length = 1504 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttga 435 |||||||| || |||||||||||||||||||| Sbjct: 1043 gtggccaccgacgttgcttctcgtggtcttga 1074
>emb|CT485797.2| Medicago truncatula chromosome 5 clone mth4-11a3, COMPLETE SEQUENCE Length = 211224 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Minus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacccaatggtgat 451 ||||| |||||||||||||| ||||| || |||||||| |||| |||| Sbjct: 160638 gtggcaactgatgttgcttcacgtgggctcgatatacctaatgttgat 160591
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 404 gtggccactgatgttgcttctcgtggtcttgatat 438 |||||||||||||||||| | |||||||| ||||| Sbjct: 5543870 gtggccactgatgttgctgcccgtggtctggatat 5543836
>ref|XM_663562.1| Cryptosporidium hominis TU502 DEAD box polypeptide, Y chromosome-related (Chro.40341) partial mRNA Length = 2109 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgatat 438 ||||| |||||||||||| ||||||| |||||||| Sbjct: 1540 gtggctactgatgttgctgctcgtgggcttgatat 1574
>gb|AC157512.3| Mus musculus BAC clone RP24-399L6 from chromosome 9, complete sequence Length = 148736 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 138 atcaagatgaaaaattagctgaa 160 ||||||||||||||||||||||| Sbjct: 114062 atcaagatgaaaaattagctgaa 114040
>ref|XM_635410.1| Dictyostelium discoideum hypothetical protein (DDB0204291), partial mRNA Length = 1761 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 413 gatgttgcttctcgtggtcttgatat 438 ||||||||| |||||||||||||||| Sbjct: 1255 gatgttgctgctcgtggtcttgatat 1280
>ref|XM_477035.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2514 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacc 441 ||||| |||||||||||| ||||||| || |||||||| Sbjct: 1774 gtggcaactgatgttgctgctcgtggactggatatacc 1811
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 53 cttttctctgcgaccatgccta 74 |||||||||||||||||||||| Sbjct: 1026156 cttttctctgcgaccatgccta 1026135
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatat 438 |||||||| || |||||||| |||||||||||||||| Sbjct: 1893235 cttgtggcaacagatgttgcggctcgtggtcttgatat 1893272
>emb|CR378678.1| Photobacterium profundum SS9 chromosome 2; segment 4/7 Length = 349527 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 413 gatgttgcttctcgtggtcttgatat 438 |||||||||||||||||||| ||||| Sbjct: 79417 gatgttgcttctcgtggtctagatat 79392
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacc 441 ||||| |||||||||||| ||||||| || |||||||| Sbjct: 5533273 gtggcaactgatgttgctgctcgtggactggatatacc 5533236 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 aggcgcttcatggtgatatttcaca 348 ||||||||||||| ||||||||||| Sbjct: 2259026 aggcgcttcatggggatatttcaca 2259002
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacc 441 ||||| |||||||||||| ||||||| || |||||||| Sbjct: 46358 gtggcaactgatgttgctgctcgtggactggatatacc 46321
>dbj|AK101736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061I19, full insert sequence Length = 2514 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacc 441 ||||| |||||||||||| ||||||| || |||||||| Sbjct: 1774 gtggcaactgatgttgctgctcgtggactggatatacc 1811
>dbj|AK059814.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B10, full insert sequence Length = 1087 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgatatacc 441 ||||| |||||||||||| ||||||| || |||||||| Sbjct: 360 gtggcaactgatgttgctgctcgtggactggatatacc 397
>gb|AE017321.1| Wolbachia endosymbiont strain TRS of Brugia malayi, complete genome Length = 1080084 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 413 gatgttgcttctcgtggtcttgatat 438 |||||||||||||| ||||||||||| Sbjct: 920189 gatgttgcttctcgaggtcttgatat 920214
>dbj|D16247.1|TOBRDB10 Tobacco mRNA for RNA helicase like protein DB10 Length = 2378 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 ctgtgcttgtggccactgatgttgct 421 ||||||||||||| |||||||||||| Sbjct: 1461 ctgtgcttgtggctactgatgttgct 1486
>ref|NM_112746.4| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G18600 mRNA, complete cds Length = 1982 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||| ||||| Sbjct: 1316 actgatgttgctgctcgtggtctcgatat 1344
>ref|NM_113129.3| Arabidopsis thaliana ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding AT3G22310 mRNA, complete cds Length = 2142 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| ||||| | ||| Sbjct: 1336 cttgttgcaactgatgttgctgcccgtggacttgatgtacctaatgtcgatttagtaatt 1395 Query: 461 cattatgag 469 ||||||||| Sbjct: 1396 cattatgag 1404 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| |||| |||||||||||||||||| Sbjct: 1035 gtacctgaacaatcctttgacaattgat 1062
>ref|XM_461087.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F18161g) partial mRNA Length = 2799 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||| ||||||| Sbjct: 1339 actgatgttgctgctcgtggtattgatat 1367
>ref|XM_734032.1| Plasmodium chabaudi chabaudi hypothetical protein (PC106816.00.0) partial mRNA Length = 594 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 141 aagatgaaaaattagctgaaggaat 165 ||||||||||||||| ||||||||| Sbjct: 509 aagatgaaaaattagatgaaggaat 533
>emb|CR648939.2|CNS0EZOX Tetraodon nigroviridis full-length cDNA Length = 1105 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 tggtgatttgattattcatta 465 ||||||||||||||||||||| Sbjct: 450 tggtgatttgattattcatta 470
>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete sequence Length = 252632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 gtgatttgattattcattatg 467 ||||||||||||||||||||| Sbjct: 43938 gtgatttgattattcattatg 43958
>gb|AY096431.1| Arabidopsis thaliana putative DEAD box helicase protein (At3g18600) mRNA, complete cds Length = 1738 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||| ||||| Sbjct: 1171 actgatgttgctgctcgtggtctcgatat 1199
>gb|AY091091.1| Arabidopsis thaliana putative RNA helicase (At3g22310) mRNA, complete cds Length = 2158 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| ||||| | ||| Sbjct: 1336 cttgttgcaactgatgttgctgcccgtggacttgatgtacctaatgtcgatttagtaatt 1395 Query: 461 cattatgag 469 ||||||||| Sbjct: 1396 cattatgag 1404 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| |||| |||||||||||||||||| Sbjct: 1035 gtacctgaacaatcctttgacaattgat 1062
>gb|AY070052.1| Arabidopsis thaliana putative DEAD box helicase protein (At3g18600) mRNA, complete cds Length = 1976 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||| ||||| Sbjct: 1308 actgatgttgctgctcgtggtctcgatat 1336
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||| ||||||| Sbjct: 1456877 actgatgttgctgctcgtggtattgatat 1456849
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 aagatgaaaaattagctgaag 161 ||||||||||||||||||||| Sbjct: 2301098 aagatgaaaaattagctgaag 2301118
>emb|AJ010461.1|ATH010461 Arabidopsis thaliana mRNA for DEAD box RNA helicase, RH9 Length = 1324 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| ||||| | ||| Sbjct: 500 cttgttgcaactgatgttgctgcccgtggacttgatgtacctaatgtcgatttagtaatt 559 Query: 461 cattatgag 469 ||||||||| Sbjct: 560 cattatgag 568 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| |||| |||||||||||||||||| Sbjct: 199 gtacctgaacaatcctttgacaattgat 226
>emb|BX826227.1|CNS0A7DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL92ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1982 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 401 cttgtggccactgatgttgcttctcgtggtcttgatatacccaatggtgatttgattatt 460 ||||| || |||||||||||| | ||||| |||||| |||| |||| ||||| | ||| Sbjct: 1301 cttgttgcaactgatgttgctgcccgtggacttgatgtacctaatgtcgatttagtaatt 1360 Query: 461 cattatgag 469 ||||||||| Sbjct: 1361 cattatgag 1369 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| |||| |||||||||||||||||| Sbjct: 1000 gtacctgaacaatcctttgacaattgat 1027
>emb|BX823774.1|CNS0A4WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1925 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||| ||||| Sbjct: 1316 actgatgttgctgctcgtggtctcgatat 1344
>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone BACR48I02, complete sequence Length = 163741 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcgatcaagatgaaaaatta 154 ||||||||||||||||||||| Sbjct: 35058 ggcgatcaagatgaaaaatta 35038
>dbj|AP001303.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K24M9 Length = 45292 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 410 actgatgttgcttctcgtggtcttgatat 438 |||||||||||| |||||||||| ||||| Sbjct: 29814 actgatgttgctgctcgtggtctcgatat 29786
>dbj|AK111212.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-A09, full insert sequence Length = 2284 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttgat 436 ||||||||||||||||| || |||||| ||||| Sbjct: 1481 gtggccactgatgttgcctcgcgtggtattgat 1513
>dbj|AK068871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169B18, full insert sequence Length = 2148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 324 aggcgcttcatggtgatatttcaca 348 ||||||||||||| ||||||||||| Sbjct: 1140 aggcgcttcatggggatatttcaca 1164
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 324 aggcgcttcatggtgatatttcaca 348 ||||||||||||| ||||||||||| Sbjct: 32725 aggcgcttcatggggatatttcaca 32701
>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete sequence Length = 236096 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ggcgatcaagatgaaaaatta 154 ||||||||||||||||||||| Sbjct: 51713 ggcgatcaagatgaaaaatta 51693
>gb|AC168881.3| Mus musculus BAC clone RP23-170A19 from chromosome 13, complete sequence Length = 212206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 actgtgcttgtggccactgat 415 ||||||||||||||||||||| Sbjct: 183088 actgtgcttgtggccactgat 183068
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 tctgcgaccatgcctagttg 78 |||||||||||||||||||| Sbjct: 1940945 tctgcgaccatgcctagttg 1940964
>gb|AE008494.1| Streptococcus pneumoniae R6 section 110 of 184 of the complete genome Length = 10635 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tattcattatgagttgccaa 476 |||||||||||||||||||| Sbjct: 10084 tattcattatgagttgccaa 10065
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 377 ttccgccaagggaaatttactgtgcttg 404 ||||||||||| |||||||| ||||||| Sbjct: 4792853 ttccgccaaggaaaatttaccgtgcttg 4792826
>ref|XM_656745.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4233.2), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 407 gccactgatgttgcttctcgtggtcttgatat 438 ||||||||||| ||| |||| ||||||||||| Sbjct: 1021 gccactgatgtcgctgctcgaggtcttgatat 1052
>gb|BT012899.1| Lycopersicon esculentum clone 114007F, mRNA sequence Length = 2183 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 gtgcttgtggccactgatgttgct 421 ||||||||||| |||||||||||| Sbjct: 1484 gtgcttgtggctactgatgttgct 1507
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agatgaaaaattagctgaag 161 |||||||||||||||||||| Sbjct: 3142896 agatgaaaaattagctgaag 3142915
>emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 in linkage group 16, complete sequence Length = 148046 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cccaatggtgatttgattat 459 |||||||||||||||||||| Sbjct: 127245 cccaatggtgatttgattat 127226
>ref|XM_625884.1| Cryptosporidium parvum Iowa II Dbp1p, eIF4a-1 family RNA SFII helicase (DEXDC+HELICc) (cgd4_3000), partial mRNA Length = 2109 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 404 gtggccactgatgttgcttctcgtggtcttga 435 ||||| |||||||||||| ||||||| ||||| Sbjct: 1540 gtggctactgatgttgctgctcgtgggcttga 1571
>ref|XM_397167.2| PREDICTED: Apis mellifera similar to CG6375-PB, isoform B (LOC413727), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 410 actgatgttgcttctcgtggtcttgatatacc 441 |||||||| ||| | ||||||||||||||||| Sbjct: 715 actgatgtagctgcacgtggtcttgatatacc 746
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 gccactgatgttgcttctcgtggt 430 ||||||||||||||| |||||||| Sbjct: 25863661 gccactgatgttgctgctcgtggt 25863638
>dbj|AB195230.1| Pyrus pyrifolia PpARF2 mRNA for alpha-L-arabinofuranosidase / beta-D-xylosidase, complete cds Length = 2575 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 gtctgaggcgcttcatggtg 338 |||||||||||||||||||| Sbjct: 309 gtctgaggcgcttcatggtg 328
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 tattcattatgagttgccaa 476 |||||||||||||||||||| Sbjct: 1294586 tattcattatgagttgccaa 1294567
>dbj|AB022215.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB17 Length = 83205 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| ||||||||||||||||| ||||| Sbjct: 13987 gtacctgaataatcctttgacagttgat 14014 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 100 gtacttgaataatcctttgacaattgat 127 |||| |||| |||||||||||||||||| Sbjct: 8754 gtacctgaacaatcctttgacaattgat 8781
>gb|AF169483.1|AF169483 Streptococcus pneumoniae 5-enolpyruvylshikimate-3-phosphate synthase (aroA) gene, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 tattcattatgagttgccaa 476 |||||||||||||||||||| Sbjct: 471 tattcattatgagttgccaa 490
>emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in linkage group 4, complete sequence Length = 195795 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 tgtggaaacaatattgcaacagct 30 |||||||||||| ||||||||||| Sbjct: 91526 tgtggaaacaattttgcaacagct 91549
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 gccactgatgttgcttctcgtggt 430 ||||||||||||||| |||||||| Sbjct: 25791837 gccactgatgttgctgctcgtggt 25791814
>emb|AL928780.5|CNS08CCA Oryza sativa chromosome 12, . BAC OSJNBa0018C20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137492 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 gccactgatgttgcttctcgtggt 430 ||||||||||||||| |||||||| Sbjct: 85112 gccactgatgttgctgctcgtggt 85089
>emb|AL691448.24| Mouse DNA sequence from clone RP23-103A1 on chromosome 11, complete sequence Length = 197959 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 152 ttagctgaaggaatcaaactctttgcta 179 |||||| ||||| ||||||||||||||| Sbjct: 134944 ttagctaaaggagtcaaactctttgcta 134917 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,585,583 Number of Sequences: 3902068 Number of extensions: 4585583 Number of successful extensions: 77619 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77150 Number of HSP's gapped (non-prelim): 467 length of query: 477 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 455 effective length of database: 17,147,199,772 effective search space: 7801975896260 effective search space used: 7801975896260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
