ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet02a05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 553 bits (279), Expect = e-154 Identities = 339/359 (94%) Strand = Plus / Plus Query: 104 gcatggctcgcatggcggtgtcggtgctggcgatcctgctcgcctggtgcgccctggcgg 163 ||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||| Sbjct: 47 gcatggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcgg 106 Query: 164 cggcgagcttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatcctga 223 |||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||| | Sbjct: 107 cggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctca 166 Query: 224 acaatggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccagtcca 283 |||| || |||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 167 acaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtcca 226 Query: 284 agcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 agcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctg 286 Query: 344 ccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgagatcgact 403 |||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 287 ccggcaccgtaaccgcctactacctgtcgtcgcagggtccgacgcacgacgagatcgact 346 Query: 404 tcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcacg 462 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 tcgagttcctgggaaacgtcaccggcgagccctacacgctgcacaccaacgtgttcacg 405
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 418 bits (211), Expect = e-114 Identities = 324/357 (90%), Gaps = 6/357 (1%) Strand = Plus / Plus Query: 105 catggctcgcatggcggtgtcggtgctggcgatcctgctcgcctggtgcgccct---ggc 161 ||||||||||||||||||||||||||||||||||||||| || | || ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 162 ggcggcgagcttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatcct 221 ||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 222 gaacaatggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccagtc 281 |||||||| ||||||||||| |||| |||||||||| ||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 282 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 339 ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 340 tctgccggcaccgtcaccgcatactacctgtcg-tcgcaggggccgacgcacgacgagat 398 || ||||||||||||||||| |||||||||||| ||| |||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 399 cgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 423 cgacttcgagttcctgggcaacgtcacgggcgagccctacacgctgcacaccaacgt 479
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 365 bits (184), Expect = 8e-98 Identities = 259/284 (91%) Strand = Plus / Plus Query: 179 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 238 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 239 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 298 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 299 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 359 catactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggca 418 | |||||| |||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 435 Query: 419 acgtcaccggcgagccctacacgctgcacaccaacgtgttcacg 462 | || ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 436 atgtgaccggggagccgtacacgctgcacaccaacgtgttcacg 479
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 365 bits (184), Expect = 8e-98 Identities = 259/284 (91%) Strand = Plus / Plus Query: 179 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 238 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 239 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 298 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 299 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 359 catactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggca 418 | |||||| |||||||||||||||||||||| || ||||||||||||||||||||||| | Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctgggga 425 Query: 419 acgtcaccggcgagccctacacgctgcacaccaacgtgttcacg 462 | || ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 426 atgtgaccggggagccgtacacgctgcacaccaacgtgttcacg 469
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 313 bits (158), Expect = 3e-82 Identities = 188/198 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 266 tccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 325 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||| Sbjct: 326 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcagggg 385 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 445 Query: 442 ctgcacaccaacgtgttc 459 |||||||||||||||||| Sbjct: 446 ctgcacaccaacgtgttc 463
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 305 bits (154), Expect = 7e-80 Identities = 187/198 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| || Sbjct: 160 tccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagatc 219 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 |||||||||||||||||||| ||||||||||||||| | | ||||||||||||||||||| Sbjct: 220 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcagggg 279 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 acggcgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 339 Query: 442 ctgcacaccaacgtgttc 459 |||||||||||||||||| Sbjct: 340 ctgcacaccaacgtgttc 357
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 293 bits (148), Expect = 3e-76 Identities = 267/304 (87%), Gaps = 2/304 (0%) Strand = Plus / Plus Query: 160 gcggcggcgagcttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatc 219 ||||||| ||||| ||| ||||| | |||||||| |||||||||||||| |||||| || Sbjct: 207 gcggcgggcagcttggaccaggagctggacatcacgtggggcgacgggcggggcaaggtc 266 Query: 220 ctgaacaatggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccag 279 || |||| || | ||| ||||||||| |||||||| ||||||||||||||||||| Sbjct: 267 cttgacaacgggcggctgctgacgctgtcgctggaccgcacgtccggctccgggttccag 326 Query: 280 tccaagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaac 339 ||| |||||||||||| ||||||||||||||||||||||| ||| || || |||||| Sbjct: 327 tcccggcacgagtacctgttcggcaagatcgacatgcagctgcggctggtgccgggcaac 386 Query: 340 tctgccggcaccgtcaccgcatactacctgtcgtcgcaggg-gccgacgcacgacgagat 398 || ||||||||||||||||| |||||||||||||||||||| | || ||||||||||||| Sbjct: 387 tccgccggcaccgtcaccgcctactacctgtcgtcgcagggcggcg-cgcacgacgagat 445 Query: 399 cgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgtt 458 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 446 cgacttcgagttcctgggcaacgtgtccggcgagccctacacgctgcacaccaacgtgtt 505 Query: 459 cacg 462 |||| Sbjct: 506 cacg 509
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 272 bits (137), Expect = 9e-70 Identities = 185/201 (92%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 |||||||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 381 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 382 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacg 441 Query: 442 ctgcacaccaacgtgttcacg 462 ||||||||||||||||||||| Sbjct: 442 ctgcacaccaacgtgttcacg 462
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 272 bits (137), Expect = 9e-70 Identities = 185/201 (92%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 |||||||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 381 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 382 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacg 441 Query: 442 ctgcacaccaacgtgttcacg 462 ||||||||||||||||||||| Sbjct: 442 ctgcacaccaacgtgttcacg 462
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 264 bits (133), Expect = 2e-67 Identities = 184/201 (91%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 154 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 213 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||| |||||||||||||||| ||||||||||||||| | | |||| ||||||||||||| Sbjct: 214 aagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcagggt 273 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| Sbjct: 274 tcgacccacgatgagatcgacttcgagttcctggggaacgtgaccggcgagccgtacacg 333 Query: 442 ctgcacaccaacgtgttcacg 462 ||||||||||||||||||||| Sbjct: 334 ctgcacaccaacgtgttcacg 354
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 252 bits (127), Expect = 9e-64 Identities = 235/271 (86%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 185 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 244 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 245 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 304 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 ||||||||||| |||||||||||||||||||||| |||||||||||| || | | |||| Sbjct: 305 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctac 364 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 365 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 424 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 |||||||| |||||| ||||||||||||||| Sbjct: 425 ggcgagccgtacacggtgcacaccaacgtgt 455
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Minus Query: 179 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 238 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 239 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 298 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 299 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 359 catactac 366 | |||||| Sbjct: 28773856 cctactac 28773849 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 28761419 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 28761478 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 28761479 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 28761538 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 354 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 28761539 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 28761586 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 28749714 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 28749773 Query: 322 aagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||||||||||||| ||||||||||||||| Sbjct: 28749774 aagctcgtccccggcaactccgccggcaccgtcacc 28749809 Score = 133 bits (67), Expect = 6e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 368 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 427 |||||||||||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 28773713 Query: 428 gcgagccctacacgctgcacaccaacgtgttcacg 462 | ||||| ||||||||||||||||||||||||||| Sbjct: 28773712 gggagccgtacacgctgcacaccaacgtgttcacg 28773678 Score = 133 bits (67), Expect = 6e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 368 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 427 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 28750013 Query: 428 gcgagccctacacgctgcacaccaacgtgttcacg 462 ||||||| ||||||||||||||||||||||||||| Sbjct: 28750014 gcgagccgtacacgctgcacaccaacgtgttcacg 28750048 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 28761748 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 |||||||| |||||| ||||||||||||||| Sbjct: 28761749 ggcgagccgtacacggtgcacaccaacgtgt 28761779 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 28754713 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 28754772 Query: 447 caccaac 453 ||||||| Sbjct: 28754773 caccaac 28754779 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaac 13230434 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 4973855 cgacgagctggacttcgagttcctgggcaac 4973825 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 4958743 cgacgagctggacttcgagttcctgggcaac 4958713 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 334 ggcaactctgccggcaccgtcaccgcatactac 366 |||||||| ||||||||||||||| | |||||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 238 bits (120), Expect = 1e-59 Identities = 171/188 (90%) Strand = Plus / Minus Query: 179 aggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcc 238 ||||||||||||||||||||||||| || |||||||||||||| | |||| ||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 239 tgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctct 298 ||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 299 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccg 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 359 catactac 366 | |||||| Sbjct: 81631 cctactac 81624 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 69194 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 69253 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 69254 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 69313 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 354 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 69314 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 69361 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 57489 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 57548 Query: 322 aagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||||||||||||| ||||||||||||||| Sbjct: 57549 aagctcgtccccggcaactccgccggcaccgtcacc 57584 Score = 133 bits (67), Expect = 6e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 368 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 427 |||||||||||||||||||||| || ||||||||||||||||||||||| || || |||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagttcctggggaatgtgaccg 81488 Query: 428 gcgagccctacacgctgcacaccaacgtgttcacg 462 | ||||| ||||||||||||||||||||||||||| Sbjct: 81487 gggagccgtacacgctgcacaccaacgtgttcacg 81453 Score = 133 bits (67), Expect = 6e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 368 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 427 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 57788 Query: 428 gcgagccctacacgctgcacaccaacgtgttcacg 462 ||||||| ||||||||||||||||||||||||||| Sbjct: 57789 gcgagccgtacacgctgcacaccaacgtgttcacg 57823 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 69523 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 |||||||| |||||| ||||||||||||||| Sbjct: 69524 ggcgagccgtacacggtgcacaccaacgtgt 69554 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 62488 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 62547 Query: 447 caccaac 453 ||||||| Sbjct: 62548 caccaac 62554
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 212 bits (107), Expect = 8e-52 Identities = 182/203 (89%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 261 gtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 320 ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | Sbjct: 291 gtccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagat 350 Query: 321 caagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg 380 |||||| || || |||||||| | ||||| |||||| | | |||||||||||| ||||| Sbjct: 351 caagctggtgccaggcaactccgt-ggcacggtcaccaccttctacctgtcgtcccaggg 409 Query: 381 -gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctaca 439 | || ||||||||||||||||||||||||||||||||||||| | ||| |||||||||| Sbjct: 410 cgacg-cgcacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctaca 468 Query: 440 cgctgcacaccaacgtgttcacg 462 ||||||||||||||||||||||| Sbjct: 469 cgctgcacaccaacgtgttcacg 491
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 180 bits (91), Expect = 3e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 198 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 257 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 258 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 317 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 ||||||||||||||||||||||||| || |||| |||||||||||| || | | ||| Sbjct: 318 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 377 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 || ||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 378 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 437 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 || ||||| |||||| ||||||| ||||||| Sbjct: 438 ggggagccgtacacggtgcacacgaacgtgt 468
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 180 bits (91), Expect = 3e-42 Identities = 226/271 (83%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 205 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 264 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 265 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 324 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 ||||||||||||||||||||||||| || |||| |||||||||||| || | | ||| Sbjct: 325 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctat 384 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 || ||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 385 ctttcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 444 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 || ||||| |||||| ||||||| ||||||| Sbjct: 445 ggggagccgtacacggtgcacacgaacgtgt 475
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 178 bits (90), Expect = 1e-41 Identities = 176/202 (87%), Gaps = 2/202 (0%) Strand = Plus / Minus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||| | Sbjct: 924 tccgggtccgggttccagtccaaggacgagtacctgttcggcaagatcgagatgcagatg 865 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg- 380 ||||| || || |||||||| || |||||||| || | | ||||||||||||||||| Sbjct: 864 aagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctgtcgtcgcagggc 805 Query: 381 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 440 | || ||||||||||||||||| | ||||||||||||||||| | |||||||||||||| Sbjct: 804 gacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacac 746 Query: 441 gctgcacaccaacgtgttcacg 462 ||||||||| |||||||||||| Sbjct: 745 gctgcacacgaacgtgttcacg 724
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 178 bits (90), Expect = 1e-41 Identities = 176/202 (87%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||| | Sbjct: 280 tccgggtccgggttccagtccaaggacgagtacctgttcggcaagatcgagatgcagatg 339 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggg- 380 ||||| || || |||||||| || |||||||| || | | ||||||||||||||||| Sbjct: 340 aagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctgtcgtcgcagggc 399 Query: 381 gccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacac 440 | || ||||||||||||||||| | ||||||||||||||||| | |||||||||||||| Sbjct: 400 gacg-cgcacgacgagatcgacctggagttcctgggcaacgtgtcgggcgagccctacac 458 Query: 441 gctgcacaccaacgtgttcacg 462 ||||||||| |||||||||||| Sbjct: 459 gctgcacacgaacgtgttcacg 480
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 172 bits (87), Expect = 6e-40 Identities = 237/287 (82%) Strand = Plus / Plus Query: 169 agcttcgacaaggagttcgacatcacctggggcgacgggcgtggcaagatcctgaacaat 228 |||||| |||| || ||||||||||||||||| || || || || |||||||| ||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 229 ggtcagctcctgacgctggcgctggacaaggtgtccggctccgggttccagtccaagcac 288 || |||||||| | || | |||||||| |||||||| ||||| || || || || Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 289 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 348 |||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 349 accgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgag 408 || |||||||| || ||||| || || ||||| || || ||||||||||||||||| ||| Sbjct: 496 acggtcaccgcctattacctatcctcacagggccctacccacgacgagatcgactttgag 555 Query: 409 ttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 ||||| || |||||| ||||| |||||||||| |||||||||||||| Sbjct: 556 ttcctcgggaacgtctccggccagccctacaccctgcacaccaacgt 602
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 151 bits (76), Expect = 2e-33 Identities = 133/152 (87%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| || Sbjct: 323 tccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagatc 382 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||||| || ||||| ||||| ||||||||||||||| | | |||||| ||||| ||||| Sbjct: 383 aagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccagggc 442 Query: 382 ccgacgcacgacgagatcgacttcgagttcct 413 || | |||||||||||||||||||||||||| Sbjct: 443 cccaaccacgacgagatcgacttcgagttcct 474 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 196 tggggcgacgggcgtggcaagatc 219 ||||||||||| |||||||||||| Sbjct: 257 tggggcgacggccgtggcaagatc 280
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 151 bits (76), Expect = 2e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||| ||||||||||| || ||||||||||| ||| || ||||||||||||||| Sbjct: 161985 gacatcacttggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctg 162044 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 ||||||||| | |||||||||||| |||||||||||| || ||||||| | |||| Sbjct: 162045 tcgctggacaggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgc 162104 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 354 ||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 162105 ttcgacatgcagatcaagctcgtccccggcaactccgccggcaccgtc 162152 Score = 151 bits (76), Expect = 2e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 150280 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 150339 Query: 322 aagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||||||||||||| ||||||||||||||| Sbjct: 150340 aagctcgtccccggcaactccgccggcaccgtcacc 150375 Score = 133 bits (67), Expect = 6e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 368 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccg 427 ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagttcctggggaacgtgaccg 150579 Query: 428 gcgagccctacacgctgcacaccaacgtgttcacg 462 ||||||| ||||||||||||||||||||||||||| Sbjct: 150580 gcgagccgtacacgctgcacaccaacgtgttcacg 150614 Score = 109 bits (55), Expect = 8e-21 Identities = 82/91 (90%) Strand = Plus / Plus Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 ||||||||||||||| || |||||||||||||||||||||||||||||| |||| | | Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagttcctggggaacgcgagc 162314 Query: 427 ggcgagccctacacgctgcacaccaacgtgt 457 |||||||| |||||| ||||||||||||||| Sbjct: 162315 ggcgagccgtacacggtgcacaccaacgtgt 162345 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 |||||||||| | ||||||||||||||||||||||| | ||||||||| ||| |||||| Sbjct: 155279 gcacgacgaggtggacttcgagttcctgggcaacgtgagcggcgagccgtacctgctgca 155338 Query: 447 caccaac 453 ||||||| Sbjct: 155339 caccaac 155345
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 125 bits (63), Expect = 1e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||| ||||| ||||||| || ||||| |||||||||||||| || |||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcacc 426 || || || ||||| |||||||||||||||||||||| |||||||| |||||||| | Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagttccttggcaacgtttct 430 Query: 427 ggcgagccctacacgctgcacaccaac 453 || || || |||||| ||||||||||| Sbjct: 431 ggggaaccgtacacgttgcacaccaac 457
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 123 bits (62), Expect = 5e-25 Identities = 164/198 (82%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 211 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 270 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||||||||||||||| | || ||||||| ||| || | | ||||||| | ||| |||| Sbjct: 271 aagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggga 330 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | Sbjct: 331 gatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtg 390 Query: 442 ctgcacaccaacgtgttc 459 ||||||||||||||||| Sbjct: 391 atgcacaccaacgtgttc 408
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 123 bits (62), Expect = 5e-25 Identities = 164/198 (82%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 279 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 338 Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||||||||||||||| | || ||||||| ||| || | | ||||||| | ||| |||| Sbjct: 339 aagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggga 398 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | Sbjct: 399 gatgcgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtg 458 Query: 442 ctgcacaccaacgtgttc 459 ||||||||||||||||| Sbjct: 459 atgcacaccaacgtgttc 476
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 119 bits (60), Expect = 8e-24 Identities = 141/168 (83%) Strand = Plus / Plus Query: 187 gacatcacctggggcgacgggcgtggcaagatcctgaacaatggtcagctcctgacgctg 246 |||||||||||||||||||| || ||||||||||| |||| || ||||||||||||||| Sbjct: 88 gacatcacctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctg 147 Query: 247 gcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaag 306 | |||||| | |||||||| || |||||||||||| | ||||||||| |||| Sbjct: 148 tccatggacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgc 207 Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtc 354 ||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 208 ttcgacatgcagctcaagctcgtcccgggggactccgccggcaccgtc 255 Score = 79.8 bits (40), Expect = 7e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 370 tcgtcgcaggggccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggc 429 ||||||||||| || |||||||||||||||||||||||||||||| |||| | ||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagttcctggggaacgcgagcggg 455 Query: 430 gagccctacacgctgcacaccaacgtgt 457 ||||| |||||| ||||||| ||||||| Sbjct: 456 gagccgtacacggtgcacacgaacgtgt 483
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 379 ||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 380 ggccgacgcacgacgagatcgacttcgagttcctggg 416 || |||||||||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagttcctggg 371
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 379 ||||||||||| ||||| |||| ||||||||||||||||| | |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 380 ggccgacgcacgacgagatcgacttcgagttcctggg 416 || |||||||||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagttcctggg 368
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 103 bits (52), Expect = 5e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 338 actctgccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgaga 397 |||| ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgaga 60 Query: 398 tcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgt 457 | ||||||||||||||||| ||| | | |||||| || |||| || ||||||||||| | Sbjct: 61 ttgacttcgagttcctggggaacctgagcggcgacccttacatcctccacaccaacgtct 120 Query: 458 tcac 461 |||| Sbjct: 121 tcac 124
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 93.7 bits (47), Expect = 5e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||||||||||| |||||||| || || ||||| ||| ||| |||| |||| || || ||| Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaac 420 |||| ||||||||||||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagttcctgggcaac 106
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 372 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 373 tc 374 || Sbjct: 341 tc 342
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 325 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 384 Query: 448 accaac 453 |||||| Sbjct: 385 accaac 390
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 386 cgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgc 445 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | ||| Sbjct: 32715 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgc 32656 Query: 446 acaccaacgtgttc 459 |||||||||||||| Sbjct: 32655 acaccaacgtgttc 32642 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 29159 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 29218 Query: 448 accaac 453 |||||| Sbjct: 29219 accaac 29224 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32994 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 32935 Query: 322 aagctcgtccccggc 336 ||||||||||||||| Sbjct: 32934 aagctcgtccccggc 32920
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 372 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 373 tc 374 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 372 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 373 tc 374 || Sbjct: 330 tc 331
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 386 cgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgc 445 ||||||||||||||||||||||||||||||| ||||| | ||||||||| ||| | ||| Sbjct: 30557007 cgcacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgc 30556948 Query: 446 acaccaacgtgttc 459 |||||||||||||| Sbjct: 30556947 acaccaacgtgttc 30556934 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | |||||||| |||||||||||||||||||| |||||||| ||| Sbjct: 30553451 cacgacgagatcgacctggagttcctcggcaacgtcaccggcgagccatacacgctccac 30553510 Query: 448 accaac 453 |||||| Sbjct: 30553511 accaac 30553516 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 32180420 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 32180467 Score = 69.9 bits (35), Expect = 7e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 |||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557286 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagatg 30557227 Query: 322 aagctcgtccccggc 336 ||||||||||||||| Sbjct: 30557226 aagctcgtccccggc 30557212 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 30517006 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 30516957 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 30508420 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 30508361 Query: 448 accaac 453 |||||| Sbjct: 30508360 accaac 30508355 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 308 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 30517206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 30517157
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 91.7 bits (46), Expect = 2e-15 Identities = 103/122 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 372 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 373 tc 374 || Sbjct: 289 tc 290
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 89.7 bits (45), Expect = 8e-15 Identities = 144/177 (81%) Strand = Plus / Plus Query: 285 gcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgc 344 ||||||||| || || || |||||||| |||||||||||||| ||||| || || ||||| Sbjct: 236 gcacgagtatctatttggtaagatcgatatgcagctcaagctggtccctggaaattctgc 295 Query: 345 cggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcacgacgagatcgactt 404 ||||||||| || || || || || || || || ||||| || || || ||||||||||| Sbjct: 296 cggcaccgttactgcttattatctttcatcacaagggcctacccatgatgagatcgactt 355 Query: 405 cgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgttcac 461 ||||||||| || || ||| ||| || || ||||| ||||||| ||||||||||| Sbjct: 356 cgagttcctcggaaatctcagcggagacccgtacacattgcacactaacgtgttcac 412
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 87.7 bits (44), Expect = 3e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagggg 381 ||||||||| |||| |||| || ||||||||||| || | |||||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcagaac 356 Query: 382 ccgacgcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacg 441 || ||||||||||||||||| |||||||||||||||| || || ||||||||| Sbjct: 357 tcggagcacgacgagatcgactccgagttcctgggcaaccggacggggcagccctacatc 416 Query: 442 ctgcacaccaacgtgttcac 461 ||||| |||||||||||||| Sbjct: 417 ctgcagaccaacgtgttcac 436
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 265 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 324 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 17324 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 17383 Query: 325 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 17384 ctcgttgccggaaactccgctggaactgtcaccgcttacta 17424
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 253 gacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 312 |||||||| |||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 ||| |||||||||| ||| | || |||||||| |||||||||||||| |||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 265 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 324 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 26245 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 26304 Query: 325 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 26305 ctcgttgccggaaactccgctggaactgtcaccgcttacta 26345
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 315 |||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 252 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 379 ||||||||||| |||| |||| |||||||| |||||||| | |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 380 ggccgacgcacgacgagatcgacttcgagttcctggg 416 || ||||||||||||||||||||||||| |||| Sbjct: 384 actcggagcacgacgagatcgacttcgagttcttggg 420
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg 379 ||||||||||| |||| |||| ||||||||||||||||| | |||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 380 ggccgacgcacgacgagatcgacttcgagttcctggg 416 || ||||||||||||||||||||||||| |||| Sbjct: 345 actcggagcacgacgagatcgacttcgagttcttggg 381
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 76109 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 76156
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 79.8 bits (40), Expect = 7e-12 Identities = 176/219 (80%), Gaps = 3/219 (1%) Strand = Plus / Plus Query: 242 cgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcg 301 |||||| ||| ||| ||| |||||||||||| ||| |||||||| | |||||||||||| Sbjct: 201 cgctggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcg 260 Query: 302 gcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcat 361 || || |||| | || | ||||||||| ||||||||| |||||||| |||||| | | Sbjct: 261 gcgagttcgaggtcaagatgaagctcgtcgacggcaactccgccggcacagtcacctcct 320 Query: 362 actacctgtcgtc--gc-aggggccgacgcacgacgagatcgacttcgagttcctgggca 418 ||||||| | || || || | |||| ||||||||||||||| |||||||| |||||| Sbjct: 321 tctacctgacttccggcgagagcgcgacccacgacgagatcgacatcgagttcatgggca 380 Query: 419 acgtcaccggcgagccctacacgctgcacaccaacgtgt 457 || || |||||| |||||| | || |||||||||||| Sbjct: 381 actccagcggcgacccctacgtgatgaacaccaacgtgt 419
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 331 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 378
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 335 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 382
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 79.8 bits (40), Expect = 7e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 31596 gcacaacgagttcgacttcgagttcctgggcaacgtcaccggcgagcc 31643
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 346 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 405 Query: 448 accaac 453 |||||| Sbjct: 406 accaac 411
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 8379000 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 8378941 Query: 448 accaac 453 |||||| Sbjct: 8378940 accaac 8378935 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 8322016 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 8322017 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 8322076 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 8482431 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 8482490 Query: 448 ac 449 || Sbjct: 8482491 ac 8482492
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||| | ||| | |||||||| || ||||||||||||||||||||||| |||||| Sbjct: 119109 cacgacgaggtggacctggagttcctcgggaacgtcaccggcgagccctacaccctgcac 119050 Query: 448 accaac 453 |||||| Sbjct: 119049 accaac 119044 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 62125 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 62126 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 62185
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 331 cccggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcaggggccgacgcac 390 ||||| || ||||| || ||||||||| | | |||| |||||||||| ||| ||| |||| Sbjct: 4 cccgggaattctgcggggaccgtcaccaccttctacttgtcgtcgcaagggtcgatgcac 63 Query: 391 gacgagatcgacttcgagttcctgggcaac 420 ||||||||||| ||||||||||| |||||| Sbjct: 64 gacgagatcgatttcgagttcctcggcaac 93
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 73.8 bits (37), Expect = 4e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacacc 450 ||||| |||||||||||||||||||| |||| ||||| |||||||||| ||||||||| Sbjct: 424 gacgaaatcgacttcgagttcctggggaacgagaccggacagccctacaccctgcacacc 483 Query: 451 aacgt 455 ||||| Sbjct: 484 aacgt 488
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 10359113 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 10359172 Query: 447 caccaacgt 455 ||||||||| Sbjct: 10359173 caccaacgt 10359181 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 15085618 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 15085677 Query: 448 accaac 453 ||||| Sbjct: 15085678 gccaac 15085683 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 323 agctcgtccccggcaactctgccggcaccgtcacc 357 ||||||||||||||||||| ||||||||||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcacc 10358939 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 28642113 gacgcacgacgagctggacttcgagttcctgggca 28642147 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 328 gtccccggcaactctgccggcaccgtcaccgcatactac 366 ||||||||||| || ||||||||||||||| |||||||| Sbjct: 10363481 gtccccggcaattcggccggcaccgtcaccacatactac 10363519 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||||| |||||| | ||||||| |||||| | |||||||| | ||| Sbjct: 10363968 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 10364027 Query: 448 accaac 453 |||||| Sbjct: 10364028 accaac 10364033 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||| | ||||||||||||||||||||| Sbjct: 1445478 gcacgacgagctggacttcgagttcctgggcaac 1445511 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 431 agccctacacgctgcacaccaacgt 455 |||||||||||||||| |||||||| Sbjct: 35396829 agccctacacgctgcagaccaacgt 35396805
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 73.8 bits (37), Expect = 4e-10 Identities = 107/128 (83%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 333 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 389 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 390 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 449 ||||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 415 Query: 450 caacgtgt 457 |||||||| Sbjct: 416 caacgtgt 423
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 1535 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 1594 Query: 447 caccaacgt 455 ||||||||| Sbjct: 1595 caccaacgt 1603 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 323 agctcgtccccggcaactctgccggcaccgtcacc 357 ||||||||||||||||||| ||||||||||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcacc 1361 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 328 gtccccggcaactctgccggcaccgtcaccgcatactac 366 ||||||||||| || ||||||||||||||| |||||||| Sbjct: 5903 gtccccggcaattcggccggcaccgtcaccacatactac 5941 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||||| |||||| | ||||||| |||||| | |||||||| | ||| Sbjct: 6390 cacgacgagatcgactttgagttcttaggcaacgagaccggccaaccctacaccatccac 6449 Query: 448 accaac 453 |||||| Sbjct: 6450 accaac 6455
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgca 446 ||||||||||||||||||||||||||||||||||| ||||| | |||||||| | || Sbjct: 124923 gcacgacgagatcgacttcgagttcctgggcaacgagaccggacaaccctacaccatcca 124982 Query: 447 caccaacgt 455 ||||||||| Sbjct: 124983 caccaacgt 124991 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 323 agctcgtccccggcaactctgccggcaccgtcacc 357 ||||||||||||||||||| ||||||||||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcacc 124749
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 265 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 324 ||||| || ||||| |||||| |||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 325 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 || ||||| ||||||||||| ||||||||||| || ||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcactgcctacta 366
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 361 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 420 Query: 448 accaacgt 455 |||||||| Sbjct: 421 accaacgt 428
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 17438276 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 17438335 Query: 448 accaacgt 455 |||||||| Sbjct: 17438336 accaacgt 17438343
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||| | || |||||||||||||||| || || Sbjct: 106500 cacgacgagatcgacatggagttcctgggcaccatccccggcgagccctacaccctccag 106559 Query: 448 accaacgt 455 |||||||| Sbjct: 106560 accaacgt 106567
>gb|AY103552.1| Zea mays PCO075057 mRNA sequence Length = 1380 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcc 434 |||| ||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 390 gcacaacgagttcgacttcgagttcctgggcaacgtgaccggcgagcc 437
>ref|XM_465430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 862 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 465 Query: 448 accaac 453 ||||| Sbjct: 466 gccaac 471
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 316 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 375 Query: 448 accaac 453 |||||| Sbjct: 376 accaac 381 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 279
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 310 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 359 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 308 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 206 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 255
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 150383 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 150334 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 141797 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 141738 Query: 448 accaac 453 |||||| Sbjct: 141737 accaac 141732 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 308 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 150583 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 150534
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 382 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 431 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 308 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 278 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 327
>dbj|AP004816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0533E11 Length = 150678 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 91399 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 91458 Query: 448 accaac 453 ||||| Sbjct: 91459 gccaac 91464
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgt 455 |||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct: 400 gagttcctcggcaacgtcaccgggcagccgtacacgctgcacaccaacgt 449 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 308 tcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| ||||| ||||||||||| || |||||| |||||||| |||||| Sbjct: 296 tcgacctgcagatcaagctcgtcgccaacaactccgccggcacggtcacc 345
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| | ||||||||||||||||||||||| | || ||||| ||||| Sbjct: 379 cacgacgagatcgacctggagttcctgggcaacgtcaccgggcaaccgtacaccctgcat 438 Query: 448 accaac 453 |||||| Sbjct: 439 accaac 444 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 342
>dbj|AK063216.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-D12, full insert sequence Length = 862 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||| | | |||||||| ||||||||||||||| |||| |||||||| ||| Sbjct: 406 cacgacgagatcggcctagagttcctcggcaacgtcaccggcaagccatacacgctccac 465 Query: 448 accaac 453 ||||| Sbjct: 466 gccaac 471
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 313 atgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcg 372 ||||||||||||||||| ||||||||||||| ||||| ||||| || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtca 320 Query: 373 tcgcaggggccgacgcacgacgagatcgacttcgagtt 410 || || ||||| || || || ||||| || |||||||| Sbjct: 321 tcccaagggccaacacatgatgagattgatttcgagtt 358
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 358 gcatactac 366 || |||||| Sbjct: 311 gcctactac 319
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 358 gcatactac 366 || |||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 358 gcatactac 366 || |||||| Sbjct: 311 gcctactac 319
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 358 gcatactac 366 || |||||| Sbjct: 288 gcctactac 296
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 106/128 (82%), Gaps = 3/128 (2%) Strand = Plus / Plus Query: 333 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 389 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 295 cggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggcca 354 Query: 390 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 449 |||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 355 tgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 414 Query: 450 caacgtgt 457 |||||||| Sbjct: 415 caacgtgt 422
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 65.9 bits (33), Expect = 1e-07 Identities = 91/108 (84%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 333 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 389 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 390 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagcccta 437 ||||||||||||| |||||||| |||||||| ||| |||||| ||||| Sbjct: 356 cgacgagatcgacatcgagttcatgggcaacctcagcggcgaccccta 403
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaac 147622 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 334 ggcaactctgccggcaccgtcaccgcatactac 366 |||||||| ||||||||||||||| | |||||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 358 gcatactac 366 || |||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 358 gcatactac 366 || |||||| Sbjct: 1391 gcctactac 1399
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaac 675 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 334 ggcaactctgccggcaccgtcaccgcatactac 366 |||||||| ||||||||||||||| | |||||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 298 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| |||||||| Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 358 gcatactac 366 || |||||| Sbjct: 253 gcctactac 261
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 410 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 63.9 bits (32), Expect = 4e-07 Identities = 95/116 (81%) Strand = Plus / Plus Query: 242 cgctggcgctggacaaggtgtccggctccgggttccagtccaagcacgagtacctcttcg 301 |||||| ||| ||| ||| |||||||||||| ||| |||||||| | |||||||||||| Sbjct: 192 cgctggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcg 251 Query: 302 gcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 || || || | | | | | ||||||||| ||||||||| ||||||||||||||| Sbjct: 252 gcgagttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacc 307 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||||||| |||||||| |||||||| | |||||| |||||| | || || Sbjct: 341 cacgacgagatcgacatcgagttcatgggcaactcgagcggcgacccctacgtgatgaac 400 Query: 448 accaacgtgt 457 |||||||||| Sbjct: 401 accaacgtgt 410
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 410 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 387 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 430
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 410 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 63.9 bits (32), Expect = 4e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 367 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 410 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 61.9 bits (31), Expect = 2e-06 Identities = 104/126 (82%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 333 cggcaactctgccggcaccgtcaccgcatactacctgtcgtcgcagg-ggccgacg--ca 389 ||||||||| ||||||||||||||| | | ||||||| |||| || || ||||| || Sbjct: 307 cggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacggcca 366 Query: 390 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacac 449 |||||||||||| |||||||| |||||||| ||| |||||| |||||| | || |||| Sbjct: 367 tgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatgaacac 426 Query: 450 caacgt 455 |||||| Sbjct: 427 caacgt 432
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 366 cctgtc 371 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 366 cctgtc 371 | |||| Sbjct: 361 cttgtc 366
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctggg 416 |||||||||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagttcctggg 113502 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 359 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 113350
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctggg 416 |||||||||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagttcctggg 13121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 359 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 12969
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 366 cctgtc 371 | |||| Sbjct: 361 cttgtc 366
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctggg 416 |||||||||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagttcctggg 19010304 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 359 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19010152
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||||||||||||||||| |||||| Sbjct: 445 gcacgacgagatcgacttcgagttccttggcaac 478
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 366 cctgtc 371 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 366 cctgtc 371 | |||| Sbjct: 361 cttgtc 366
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctggg 416 |||||||||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagttcctggg 19168953 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 320 tcaagctcgtccccggcaactctgccggcaccgtcaccgc 359 ||||||||||| ||||| |||| ||||||||||||||||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgc 19168801
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 366 cctgtc 371 | |||| Sbjct: 276 cttgtc 281
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 366 c 366 | Sbjct: 95813 c 95813
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| ||||||||||| || ||| |||| ||||| |||||||||||||| || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 366 c 366 | Sbjct: 35361 c 35361
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 339 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 340 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 399
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 99/120 (82%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtcaccgcatactacctgtcgtc-gcaggg 380 ||||||||| ||||||||| ||||||||||||||| | | |||||| || || | | | Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 381 gccgacg--cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctac 438 | ||||| ||||||||||||||| |||||||| |||||||| ||| |||| | |||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 262 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 321 ||||||||||| ||| | |||||| || |||||||||||||| || || | | | | | Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatg 288 Query: 322 aagctcgtccccggcaactctgccggcaccgtcacc 357 ||||||||| ||||||||| ||||||||||||||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacc 324
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 478 gacgcacgacgagctggacttcgagttcctgggca 512
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7311670 gacgcacgacgagctggacttcgagttcctggggaacgt 7311632 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35691476 gacgcacgacgagctggacttcgagttcttgggcaac 35691440 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcct 413 ||||||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagttcct 944240
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 62926 gacgcacgacgagctggacttcgagttcctggggaacgt 62888
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 396 gatcgacttcgagtt--cctgggcaacgtcaccggcga 431 ||||||||||||||| ||||||||||||||||||||| Sbjct: 19933644 gatcgacttcgagttttcctgggcaacgtcaccggcga 19933681
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 7309565 gacgcacgacgagctggacttcgagttcctggggaacgt 7309527 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 35781549 gacgcacgacgagctggacttcgagttcttgggcaac 35781513 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcct 413 ||||||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagttcct 944238
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 106126 gacgcacgacgagctggacttcgagttcctgggca 106160
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 476 gacgcacgacgagctggacttcgagttcctgggca 510
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggca 418 ||||||||||||| | ||||||||||||||||||| Sbjct: 477 gacgcacgacgagctggacttcgagttcctgggca 511
>dbj|AK061284.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G03, full insert sequence Length = 1194 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||||||| | ||||||||||||||||| ||||| Sbjct: 433 gacgcacgacgagctggacttcgagttcctggggaacgt 471
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Plus Query: 396 gatcgacttcgagtt--cctgggcaacgtcaccggcga 431 ||||||||||||||| ||||||||||||||||||||| Sbjct: 19859858 gatcgacttcgagttttcctgggcaacgtcaccggcga 19859895
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/38 (94%), Gaps = 2/38 (5%) Strand = Plus / Minus Query: 396 gatcgacttcgagtt--cctgggcaacgtcaccggcga 431 ||||||||||||||| ||||||||||||||||||||| Sbjct: 93616 gatcgacttcgagttttcctgggcaacgtcaccggcga 93579
>ref|XM_463978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 390 cgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctaca 439 ||||||| | ||||||||||||||||||||| || ||| |||||||||| Sbjct: 156 cgacgagctggacttcgagttcctgggcaaccgcagcggggagccctaca 205
>dbj|AP005311.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0482F12 Length = 147735 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||| | ||||||||||||||||||||| Sbjct: 126750 gcacgacgagctggacttcgagttcctgggcaac 126783
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||| | ||||||||||||||||||||| Sbjct: 8899 gcacgacgagctggacttcgagttcctgggcaac 8932
>dbj|AK073018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149H23, full insert sequence Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||| | ||||||||||||||||||||| Sbjct: 636 gcacgacgagctggacttcgagttcctgggcaac 669
>ref|XM_470453.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 456 gacgcacgacgagctggacttcgagttcttgggcaac 492
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 89254 gacgcacgacgagctggacttcgagttcttgggcaac 89218
>gb|AY580314.1| Selaginella kraussiana putative xyloglucan endotransglucosylase/hydrolase (XTH1) mRNA, complete cds Length = 849 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcctgggcaa 419 |||||||||||| |||||||||||||||| Sbjct: 295 gacgagatcgacctcgagttcctgggcaa 323
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtc 354 |||||| ||||||||||||| |||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgtc 360 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacg 421 |||||||||||||||| | |||||| ||||||||| Sbjct: 396 gcacgacgagatcgacatggagttcatgggcaacg 430
>dbj|AK104577.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-A12, full insert sequence Length = 1326 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 407 gacgcacgacgagctggacttcgagttcttgggcaac 443
>dbj|AK071886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H18, full insert sequence Length = 1359 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 384 gacgcacgacgagatcgacttcgagttcctgggcaac 420 ||||||||||||| | |||||||||||| |||||||| Sbjct: 460 gacgcacgacgagctggacttcgagttcttgggcaac 496
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 322 aagctcgtccccggcaactctgccggcaccgtc 354 |||||| ||||||||||||| |||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgtc 385 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacg 421 |||||||||||||||| | |||||| ||||||||| Sbjct: 421 gcacgacgagatcgacatggagttcatgggcaacg 455
>gb|DQ449625.1| Dianthus caryophyllus endo-transglycosylase (XTH2) mRNA, partial cds Length = 716 Score = 48.1 bits (24), Expect = 0.026 Identities = 48/56 (85%) Strand = Plus / Plus Query: 403 ttcgagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaacgtgtt 458 ||||||||||| || ||||| || || || || |||||||||||||| |||||||| Sbjct: 10 ttcgagttcctaggaaacgttacgggagaaccttacacgctgcacacgaacgtgtt 65
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 307 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatactac 366 |||||||||||||| || |||||| |||| ||||| || || |||||||| || |||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcacc 357 |||||||||| | ||||||||||| ||| | |||| ||||||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgtcacc 272 Score = 48.1 bits (24), Expect = 0.026 Identities = 42/48 (87%) Strand = Plus / Minus Query: 406 gagttcctgggcaacgtcaccggcgagccctacacgctgcacaccaac 453 ||||||||||||||||||||||| | || ||||| ||||| |||||| Sbjct: 231 gagttcctgggcaacgtcaccgggcaaccgtacaccctgcataccaac 184
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcct 413 ||||||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagttcct 99437
>ref|XM_450915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1457 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||| | |||||||||||||| |||||||| Sbjct: 13727110 cacgacgaggtggacttcgagttcctcggcaacgt 13727076
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 15969 cgacgagctggacttcgagttcctgggcaac 15939 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 857 cgacgagctggacttcgagttcctgggcaac 827
>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0528E04 Length = 170701 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 161338 cgacgagctggacttcgagttcctgggcaac 161308 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 390 cgacgagatcgacttcgagttcctgggcaac 420 ||||||| | ||||||||||||||||||||| Sbjct: 146226 cgacgagctggacttcgagttcctgggcaac 146196
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1040D06 Length = 155034 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||| | |||||||||||||| |||||||| Sbjct: 125224 cacgacgaggtggacttcgagttcctcggcaacgt 125190
>dbj|AK122079.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N05, full insert sequence Length = 1621 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||| | |||||||||||||| |||||||| Sbjct: 596 cacgacgaggtggacttcgagttcctcggcaacgt 630
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcct 413 ||||||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagttcct 377
>dbj|AK060495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E08, full insert sequence Length = 1457 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgt 422 ||||||||| | |||||||||||||| |||||||| Sbjct: 404 cacgacgaggtggacttcgagttcctcggcaacgt 438
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaacg 421 |||||||||||||||| | |||||| ||||||||| Sbjct: 435 gcacgacgagatcgacatggagttcatgggcaacg 469
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108, complete sequence Length = 117124 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Minus Query: 292 tacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcacc 351 |||||||| || | ||| || |||||||||||||| || | ||||||||||| ||||| Sbjct: 92397 tacctctttgggaggattgatatgcagctcaagcttgttgctggcaactctgctggcact 92338 Query: 352 gtcaccgcatactac 366 ||||| || |||||| Sbjct: 92337 gtcactgcttactac 92323
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 307 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 366 Query: 448 ac 449 || Sbjct: 367 ac 368
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctgggcaac 420 |||||||||||||||| | |||||| |||||||| Sbjct: 252 gcacgacgagatcgacatggagttcatgggcaac 285
>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds Length = 590284 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ttccagcttttcatccttctca 30 |||||||||||||||||||||| Sbjct: 29251 ttccagcttttcatccttctca 29272
>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence Length = 163926 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ttccagcttttcatccttctca 30 |||||||||||||||||||||| Sbjct: 92371 ttccagcttttcatccttctca 92350
>gb|AF223419.1|AF223419 Asparagus officinalis xyloglucan endotransglycosylase XET1 (AoXET1) mRNA, complete cds Length = 1128 Score = 44.1 bits (22), Expect = 0.40 Identities = 55/66 (83%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||| |||||||||||||| ||||| |||||| ||| ||||| || |||| || ||| Sbjct: 314 cacgatgagatcgacttcgaattcctcggcaacctcagtggcgacccatacatcctacac 373 Query: 448 accaac 453 |||||| Sbjct: 374 accaac 379
>emb|BX827656.1|CNS0A2HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 44.1 bits (22), Expect = 0.40 Identities = 55/66 (83%) Strand = Plus / Plus Query: 306 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||| |||||||||| || ||| |||| |||| |||||||||||||| || ||||| Sbjct: 285 gatcgatatgcagctcagacttgtcgccggagactcggccggcaccgtcactgcttacta 344 Query: 366 cctgtc 371 | |||| Sbjct: 345 cttgtc 350
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 98148 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 98207 Query: 448 ac 449 || Sbjct: 98208 ac 98209
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 44.1 bits (22), Expect = 0.40 Identities = 52/62 (83%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctgggcaacgtcaccggcgagccctacacgctgcac 447 ||||||||||| ||| | |||||| |||| ||| ||| |||||||| ||||| |||||| Sbjct: 11974 cacgacgagattgaccttgagttcttggggaactccactggcgagccgtacaccctgcac 12033 Query: 448 ac 449 || Sbjct: 12034 ac 12035
>emb|AM179464.1| Uncultured sulfate-reducing bacterium partial dsrAB gene for sulfite reductase, dissimilatory-type alpha subunit, clone 3d_20 Length = 702 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 408 gttcctgggcaacgtcaccggcgagc 433 ||||||||||| |||||||||||||| Sbjct: 129 gttcctgggcaccgtcaccggcgagc 154
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 114 catggcggtgtcggtgctggcg 135 |||||||||||||||||||||| Sbjct: 2218712 catggcggtgtcggtgctggcg 2218691
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 387 gcacgacgagatcgacttcgagttcctggg 416 |||||| |||||||||||||||||| |||| Sbjct: 353 gcacgatgagatcgacttcgagttcttggg 382
>ref|NM_118713.2| Arabidopsis thaliana XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25810 (XTR6) mRNA, complete cds Length = 1078 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 265 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 324 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 217 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 276 Query: 325 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 277 ctcgttgccggaaactccgctggaactgtcaccgcttacta 317
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 431 agccctacacgctgcacaccaacgt 455 |||||||||||||||| |||||||| Sbjct: 422 agccctacacgctgcagaccaacgt 446
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 266 gctccgggttccagtccaagcacga 290 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 243 gctggcgctggacaaggtgtccggc 267 ||||||||||||||||||| ||||| Sbjct: 1311448 gctggcgctggacaaggtgcccggc 1311472
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 cggcaagatcgacatgcagctcaag 324 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA, complete cds Length = 1268 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctggg 416 |||||||||||||| ||||||||| |||| Sbjct: 370 cacgacgagatcgatttcgagttcttggg 398
>gb|AF411808.1| Lycopersicon esculentum BAC clone Clemson_Id 62O11, complete sequence Length = 70347 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 337 aactctgccggcaccgtcaccgcatacta 365 |||||||| ||||| |||||||||||||| Sbjct: 59824 aactctgctggcactgtcaccgcatacta 59852
>gb|AC087773.1|AC087773 Genomic Sequence For Lycopersicon esculentum Clone T62O11, complete sequence Length = 70497 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 337 aactctgccggcaccgtcaccgcatacta 365 |||||||| ||||| |||||||||||||| Sbjct: 59824 aactctgctggcactgtcaccgcatacta 59852
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 431 agccctacacgctgcacaccaacgt 455 |||||||||||||||| |||||||| Sbjct: 8350 agccctacacgctgcagaccaacgt 8326
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 431 agccctacacgctgcacaccaacgt 455 |||||||||||||||| |||||||| Sbjct: 57377 agccctacacgctgcagaccaacgt 57353
>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase, partial cds Length = 1292 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 388 cacgacgagatcgacttcgagttcctggg 416 |||||||||||||| ||||||||| |||| Sbjct: 436 cacgacgagatcgatttcgagttcttggg 464
>gb|AC005828.1|AC005828 Homo sapiens chromosome 17, clone hRPK.269_G_24, complete sequence Length = 163685 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 tcccttccagcttttcatcct 25 ||||||||||||||||||||| Sbjct: 111619 tcccttccagcttttcatcct 111639
>gb|U43488.1|ATU43488 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR6) mRNA, complete cds Length = 885 Score = 42.1 bits (21), Expect = 1.6 Identities = 81/101 (80%) Strand = Plus / Plus Query: 265 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 324 ||||| || ||||| |||||| |||| || | ||||| || |||||||||||| |||| Sbjct: 169 ggctcaggattccaatccaagaacgaatatttgttcggtaaaatcgacatgcagatcaaa 228 Query: 325 ctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 ||||| |||| ||||| || || || |||||||| ||||| Sbjct: 229 ctcgttgccggaaactccgctggaactgtcaccgcttacta 269
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatttgtcttgtgacttgtg 56 |||||||||||||||||||| Sbjct: 221597 tatttgtcttgtgacttgtg 221616
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 ggtgtcggtgctggcgatcctgctcgcc 147 |||| ||||| ||||||||||||||||| Sbjct: 3145732 ggtgccggtgatggcgatcctgctcgcc 3145705
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggctccgggttccagtccaagcac 288 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 ggtgtcggtgctggcgatcctgctcgcc 147 |||| ||||| ||||||||||||||||| Sbjct: 1655427 ggtgccggtgatggcgatcctgctcgcc 1655454
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcgagcttcgacaaggagttcg 187 ||||||||||||||||||| |||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 265 ggctccgggttccagtccaagcac 288 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>gb|BT014081.1| Lycopersicon esculentum clone 133181F, mRNA sequence Length = 1229 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 310 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||||||||||| || ||||| || || ||||| ||||| ||||| || ||||| Sbjct: 251 gacatgcagctcaaacttgtcccaggaaattctgctggcactgtcactgcttacta 306
>gb|AY497476.1| Lycopersicon esculentum xyloglucan endotransglucosylase-hydrolase XTH3 (XTH3) mRNA, complete cds Length = 1055 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 310 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtcaccgcatacta 365 |||||||||||||| || ||||| || || ||||| ||||| ||||| || ||||| Sbjct: 244 gacatgcagctcaaacttgtcccaggaaattctgctggcactgtcactgcttacta 299
>gb|AY460341.1| Oncopeltus fasciatus hunchback mRNA, complete cds Length = 2071 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgacatcacctggggcgacg 205 |||||||||||||||||||| Sbjct: 723 cgacatcacctggggcgacg 742
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctgacgctggcgctggacaaggtg 261 |||||||||||||||| ||||||| Sbjct: 195103 ctgacgctggcgctggccaaggtg 195126
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tatttgtcttgtgacttgtg 56 |||||||||||||||||||| Sbjct: 66091 tatttgtcttgtgacttgtg 66110
>gb|AC121984.3| Mus musculus BAC clone RP24-292L23 from chromosome 3, complete sequence Length = 145348 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttttcatccttctcatcaa 34 |||||||||||||||||||| Sbjct: 112181 cttttcatccttctcatcaa 112162
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gacttcgagttcctgggcaa 419 |||||||||||||||||||| Sbjct: 3333298 gacttcgagttcctgggcaa 3333279
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 ggtgtcggtgctggcgatcctgctcgcc 147 |||| ||||| ||||||||||||||||| Sbjct: 1542370 ggtgccggtgatggcgatcctgctcgcc 1542397
>emb|AJ518827.1|RET518827 Rhizobium etli partial gdhB gene for NAD-glutamate dehydrogenase Length = 537 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gggcaacgtcaccggcgagc 433 |||||||||||||||||||| Sbjct: 309 gggcaacgtcaccggcgagc 328
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gggcaacgtcaccggcgagc 433 |||||||||||||||||||| Sbjct: 4350898 gggcaacgtcaccggcgagc 4350917
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcgagcttcgacaaggagttcg 187 ||||||||||||||||||| |||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|DQ382358.1| Glycine max clone pSXET1a xyloglucan endotransglycosylase precursor (XET1) mRNA, partial cds Length = 681 Score = 40.1 bits (20), Expect = 6.2 Identities = 47/56 (83%) Strand = Plus / Plus Query: 289 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgc 344 |||||| | ||||| || || ||||||||||||||||| || || || |||||||| Sbjct: 354 gagtacttgttcggaaaaattgacatgcagctcaagcttgtgcctggtaactctgc 409
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 cgatcctgctcgcctggtgc 153 |||||||||||||||||||| Sbjct: 1726715 cgatcctgctcgcctggtgc 1726734
>gb|AY129331.1| Mycobacteriophage CJW1, complete genome Length = 75931 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 gtgctggcgatcctgctcgc 146 |||||||||||||||||||| Sbjct: 796 gtgctggcgatcctgctcgc 815
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 164 cggcgagcttcgacaaggagttcg 187 ||||||||||||||||||| |||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome Length = 56425 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 ggtgctggcgatcctgctcg 145 |||||||||||||||||||| Sbjct: 54849 ggtgctggcgatcctgctcg 54868
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgctggcgatcctgctcgcc 147 |||||||||||||||||||| Sbjct: 925869 tgctggcgatcctgctcgcc 925888
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ctgacgctggcgctggacaa 257 |||||||||||||||||||| Sbjct: 1832811 ctgacgctggcgctggacaa 1832792
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 gctggcgatcctgctcgcct 148 |||||||||||||||||||| Sbjct: 5519571 gctggcgatcctgctcgcct 5519590
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 391 gacgagatcgacttcgagttcctg 414 |||||||||||||||||| ||||| Sbjct: 4194088 gacgagatcgacttcgagatcctg 4194111
>gb|AC108437.14| Mus musculus chromosome 13, clone RP23-207N7, complete sequence Length = 194800 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 tgaacaatggtcagctcctg 240 |||||||||||||||||||| Sbjct: 38279 tgaacaatggtcagctcctg 38298
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 ggtgtcggtgctggcgatcctgctcgcc 147 |||| ||||| ||||||||||||||||| Sbjct: 3230785 ggtgccggtgatggcgatcctgctcgcc 3230758
>gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, complete sequence Length = 174136 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cttttcatccttctcatcaa 34 |||||||||||||||||||| Sbjct: 126267 cttttcatccttctcatcaa 126248 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,949,564 Number of Sequences: 3902068 Number of extensions: 2949564 Number of successful extensions: 60772 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58352 Number of HSP's gapped (non-prelim): 2395 length of query: 462 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 440 effective length of database: 17,147,199,772 effective search space: 7544767899680 effective search space used: 7544767899680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
