>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 25/91 (27%), Positives = 34/91 (37%)
 Frame = -1

Query: 356 YSPRNPKTLISHKVPAESYKQHPPIPGRHRLWLRLGRYLIVFEPPTFVLD**KHPWQMLS 177
           +SP  PK    +K P    K + P P  H        Y+    PP         P +  S
Sbjct: 331 HSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPP---------PVKHYS 381

Query: 176 QLFVFHKSKNFTSDYEIRMPPTVPINHYSDP 84
              V+H        Y  + PP  P++HYS P
Sbjct: 382 PPPVYHSPPPPKEKYVYKSPPPPPVHHYSPP 412

>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore|
           domain potassium channel Ork1)
          Length = 1001

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 302 RTPPAPYEKSKSLGSGGSMVARLKLKGIDGRAPP 403
           R PP P+E + SL SGG  +  +  +  DG  PP
Sbjct: 599 RGPPPPFESNGSLASGGGGLTNMGFQMEDGATPP 632

>APE1_AERPE (O73942) Homing endonuclease I-ApeI (EC 3.1.-.-) (rRNA|
           intron-encoded homing endonuclease 1)
          Length = 222

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 19/34 (55%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 326 KSKSLGS--GGSMVARLKLKGIDGRAPPGVEPAA 421
           KSK L    G  +    KLKGI G AP GVEPAA
Sbjct: 189 KSKKLNELLGRPLPGPSKLKGIGGGAPQGVEPAA 222

>AKT6_ARATH (Q8GXE6) Potassium channel AKT6 (Shaker pollen inward rectifier|
           K(+) channel) (Potassium channel SPIK)
          Length = 888

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +2

Query: 197 VFINQERKLGARRRSDTVLVSTINDADQGSADVAYRTPPAPYEKSKSLGSGGSMV 361
           V ++Q+RKL   R S   ++S  N AD G      R+P  P       G GGSM+
Sbjct: 773 VVVSQKRKLNNFRNSLFGIISAANSADDGGE--VPRSPAVP-------GGGGSMI 818

>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)|
          Length = 655

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 445 GVLLCL*LSRRLHAWWCPSVNSFKFQPC---DHTPPG 344
           G+L+C    RRL   +C S      +PC   DH PPG
Sbjct: 97  GLLMCRGCGRRLPRQFCRSCGVVLCEPCREADHQPPG 133

>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger|
           protein HT2A) (72 kDa Tat-interacting protein)
          Length = 653

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 445 GVLLCL*LSRRLHAWWCPSVNSFKFQPC---DHTPPG 344
           G+L+C    RRL   +C S      +PC   DH PPG
Sbjct: 96  GLLMCRSCGRRLPRQFCRSCGLVLCEPCREADHQPPG 132

>NEU1_CATCO (P15210) Isoticin-neurophysin IT 1 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 1]
          Length = 154

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 181 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 297
           S+C  C+  S   +GG + I+  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAIQDSPSRQCMSCGPGDRGRC 53

>RGYR_SULSH (P74759) Reverse gyrase [Includes: Helicase (EC 3.6.1.-);|
           Topoisomerase (EC 5.99.1.3)]
          Length = 1166

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 126 YFIVRGEILGFMKDEQLRKHLPRMFSLIKNE 218
           + I++GE + + K EQLR+ L    SL+K++
Sbjct: 439 FSIIKGETINYQKLEQLRQELLYYISLVKDK 469

>NEU2_CATCO (P15211) Isoticin-neurophysin IT 2 precursor [Contains: Isotocin|
           (IT); Neurophysin IT 2]
          Length = 148

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 181 SICQGCFH*SRTKVGGSKTIRYRPSLNHKRCRPGIGGCC 297
           S+C  C+  S   +GG + ++  PS     C PG  G C
Sbjct: 16  SVCSACYI-SNCPIGGKRAVQDLPSRQCMSCGPGDRGRC 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,122,807
Number of Sequences: 219361
Number of extensions: 1681421
Number of successful extensions: 3750
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3747
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)