ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet01h05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full insert sequence Length = 1366 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 33 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 93 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 212 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 213 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 272 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 273 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 332 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 333 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 392 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 452 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 453 gatcaaggtcgt 464
>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full insert sequence Length = 1540 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 38 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 338 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 397 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 457 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 458 gatcaaggtcgt 469
>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full insert sequence Length = 1538 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 38 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 338 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 397 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 457 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 458 gatcaaggtcgt 469
>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full insert sequence Length = 1566 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 38 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 338 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 397 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 457 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 458 gatcaaggtcgt 469
>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full insert sequence Length = 1473 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 38 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 338 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 397 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 457 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 458 gatcaaggtcgt 469
>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full insert sequence Length = 1571 Score = 591 bits (298), Expect = e-166 Identities = 399/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 34 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 93 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 94 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 153 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 154 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 213 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 214 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 273 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 274 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 333 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 334 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 393 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 453 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 454 gatcaaggtcgt 465
>ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 583 bits (294), Expect = e-163 Identities = 395/428 (92%), Gaps = 3/428 (0%) Strand = Plus / Plus Query: 22 atggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgctggag 78 ||||||||||||||||||||| | |||| | |||||||||||| ||| || |||| Sbjct: 1 atggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtcggag 60 Query: 79 ttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgac 138 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 ttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccgacgac 120 Query: 139 ttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcggaag 198 |||||| ||| |||||||||||||| ||||||| |||||||||||||| ||||| | Sbjct: 121 ttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcggcgg 180 Query: 199 gcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaac 258 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 181 gcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcgcaac 240 Query: 259 ttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaac 318 |||||||||||||||||||||||||||||||||||||| || || || |||||||||||| Sbjct: 241 ttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccatcaac 300 Query: 319 gacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcatc 378 |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 301 gacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcggcatc 360 Query: 379 ttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgatc 438 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgatc 420 Query: 439 aaggtcgt 446 |||||||| Sbjct: 421 aaggtcgt 428
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full insert sequence Length = 1468 Score = 583 bits (294), Expect = e-163 Identities = 398/432 (92%), Gaps = 3/432 (0%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 33 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 93 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 212 Query: 195 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 254 | ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 213 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 272 Query: 255 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 314 |||||||||||||||||||||||||||||||||||||||||| || || || |||||||| Sbjct: 273 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 332 Query: 315 caacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctggg 374 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 333 caacgacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacgactccacgctcgg 392 Query: 375 catcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggt 434 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 catcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggc 452 Query: 435 gatcaaggtcgt 446 |||||||||||| Sbjct: 453 gatcaaggtcgt 464
>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA) glyceraldehyde-3-phosphate dehydrogenase Length = 1382 Score = 504 bits (254), Expect = e-139 Identities = 346/377 (91%) Strand = Plus / Plus Query: 76 gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 135 |||||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 1 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 60 Query: 136 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 195 ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| Sbjct: 61 gacttcatgtccgccgtctccttcaggacccacgcggtcggcacgagcggcgggccgcgg 120 Query: 196 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 255 ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 121 cgggcgccgacggaggcgaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 180 Query: 256 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 315 ||||||||||||||||||||||| ||||||||| |||||| || || || ||||||||| Sbjct: 181 aacttcctgcggtgctggcacggccgcggcgacgcctcgcccctcgatgtcatcgccatc 240 Query: 316 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 375 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 241 aacgacaccggaggcgtcaagcaggcgtcccacctgctcaagtacgactccacgctcggc 300 Query: 376 atcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtg 435 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 301 atcttcgacgccgacgtcaagcccgtcggcgacaacgccatctccgtcgacggcaaggtc 360 Query: 436 atcaaggtcgtgtncga 452 ||||||||||||| ||| Sbjct: 361 atcaaggtcgtgtccga 377
>gb|AY103602.1| Zea mays PCO093211 mRNA sequence Length = 1490 Score = 504 bits (254), Expect = e-139 Identities = 346/377 (91%) Strand = Plus / Plus Query: 76 gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 135 |||||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 91 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 150 Query: 136 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 195 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 151 gacttcatgtccgccgtctccttcaggacccacgcggtcggcacgagcggcgggtcgcgg 210 Query: 196 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 255 ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 211 cgggcgccgacggaggcgaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 270 Query: 256 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 315 ||||||||||||||||||||||||||||||||| |||||| || || || ||||||||| Sbjct: 271 aacttcctgcggtgctggcacgggcgcggcgacgcctcgcccctcgacgtcatcgccatc 330 Query: 316 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 375 ||||||||||| || || ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 331 aacgacaccggcggtgtcaagcaggcgtcccacctgctcaagtacgactccacgctcggc 390 Query: 376 atcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtg 435 ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 391 atcttcgacgccgacgtcaagcccgtcggcgacaacgccatctccgtcgacggcaaggtc 450 Query: 436 atcaaggtcgtgtncga 452 ||||||||||||| ||| Sbjct: 451 atcaaggtcgtgtccga 467
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 442 bits (223), Expect = e-121 Identities = 259/271 (95%) Strand = Plus / Plus Query: 176 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 235 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 120991 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 121050 Query: 236 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121051 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 121110 Query: 296 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 355 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 121111 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 121170 Query: 356 agtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgcca 415 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 121171 agtacgactccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgcca 121230 Query: 416 tctccgtcgacggcaaggtgatcaaggtcgt 446 ||||||||||||||||||||||||||||||| Sbjct: 121231 tctccgtcgacggcaaggtgatcaaggtcgt 121261 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 120791 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 120850 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggt 173 |||||||||| ||| |||||||||||||| ||||||| Sbjct: 120851 cgacttcatgaacgcggtctccttcaggacccacgcggt 120889 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64 ||||||||||||||||||||||||| | |||| | ||||||||||| Sbjct: 120634 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 120680
>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16, complete sequence Length = 176383 Score = 442 bits (223), Expect = e-121 Identities = 259/271 (95%) Strand = Plus / Plus Query: 176 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 235 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 6672 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 6731 Query: 236 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6732 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 6791 Query: 296 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 355 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6792 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 6851 Query: 356 agtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgcca 415 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6852 agtacgactccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgcca 6911 Query: 416 tctccgtcgacggcaaggtgatcaaggtcgt 446 ||||||||||||||||||||||||||||||| Sbjct: 6912 tctccgtcgacggcaaggtgatcaaggtcgt 6942 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6472 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 6531 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggt 173 |||||||||| ||| |||||||||||||| ||||||| Sbjct: 6532 cgacttcatgaacgcggtctccttcaggacccacgcggt 6570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64 ||||||||||||||||||||||||| | |||| | ||||||||||| Sbjct: 6315 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 6361
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 442 bits (223), Expect = e-121 Identities = 259/271 (95%) Strand = Plus / Plus Query: 176 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 235 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 22912216 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 22912275 Query: 236 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 295 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22912276 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 22912335 Query: 296 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 355 | || || || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 22912336 ccctcgacgtcatcgccatcaacgacaccggaggcgtgaagcaggcgtcgcacctcctca 22912395 Query: 356 agtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgcca 415 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22912396 agtacgactccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgcca 22912455 Query: 416 tctccgtcgacggcaaggtgatcaaggtcgt 446 ||||||||||||||||||||||||||||||| Sbjct: 22912456 tctccgtcgacggcaaggtgatcaaggtcgt 22912486 Score = 141 bits (71), Expect = 2e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22912016 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 22912075 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggt 173 |||||||||| ||| |||||||||||||| ||||||| Sbjct: 22912076 cgacttcatgaacgcggtctccttcaggacccacgcggt 22912114 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64 ||||||||||||||||||||||||| | |||| | ||||||||||| Sbjct: 22911859 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 22911905
>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 6414 Score = 385 bits (194), Expect = e-104 Identities = 256/277 (92%) Strand = Plus / Plus Query: 176 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 235 |||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||||| | Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044 Query: 236 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 295 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104 Query: 296 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 355 | || || || |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2105 ccctcgacgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctca 2164 Query: 356 agtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgcca 415 |||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 2165 agtacgactccacgctcggcatcttcgatgccgacgtcaagcccgtcggcgacaacgcca 2224 Query: 416 tctccgtcgacggcaaggtgatcaaggtcgtgtncga 452 ||||||||||||||||||| ||||||||||||| ||| Sbjct: 2225 tctccgtcgacggcaaggtcatcaaggtcgtgtccga 2261 Score = 123 bits (62), Expect = 5e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 76 gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 135 |||||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762 Query: 136 gacttcatgtccgccgtctccttcaggacatacgcggt 173 ||||||||||||||||||||||||||||| ||||||| Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene, complete cds, clone lambda-gapA1 Length = 6414 Score = 385 bits (194), Expect = e-104 Identities = 256/277 (92%) Strand = Plus / Plus Query: 176 gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 235 |||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||||| | Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044 Query: 236 ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 295 ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104 Query: 296 cgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctca 355 | || || || |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2105 ccctcgacgtcatcgccatcaacgacaccggaggcgtcaagcaggcgtcccacctgctca 2164 Query: 356 agtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgcca 415 |||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||||| Sbjct: 2165 agtacgactccacgctcggcatcttcgatgccgacgtcaagcccgtcggcgacaacgcca 2224 Query: 416 tctccgtcgacggcaaggtgatcaaggtcgtgtncga 452 ||||||||||||||||||| ||||||||||||| ||| Sbjct: 2225 tctccgtcgacggcaaggtcatcaaggtcgtgtccga 2261 Score = 123 bits (62), Expect = 5e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 76 gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 135 |||||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762 Query: 136 gacttcatgtccgccgtctccttcaggacatacgcggt 173 ||||||||||||||||||||||||||||| ||||||| Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit (GAPDH) mRNA, partial cds Length = 1073 Score = 381 bits (192), Expect = e-102 Identities = 374/433 (86%), Gaps = 5/433 (1%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccagggg----ggcatgc 73 ||||||||||||||| ||||||||| | |||| | ||||||||||||| ||| || Sbjct: 41 ggacatggcgtcgcc-atgctctccgccgccaccgtgccactccaggggaggcggcttgt 99 Query: 74 tggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccg 133 ||| |||||||| |||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 100 cggatttctccggcctgaggagctcgtcgtcgctgccgctgcggcgggatgccacctccg 159 Query: 134 acgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgc 193 || |||||||| | | |||||||||||||| ||||||| |||||| ||||||| ||| Sbjct: 160 acaacttcatgaacccggtctccttcaggacccacgcggttggcacgaacggcggggcgc 219 Query: 194 ggaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggc 253 || |||||| |||||||| || || ||||||||||||||||||||||| ||| |||||| Sbjct: 220 ggcgggcgcccacggaggcaaaactgaaggtggcgatcaacgggttcggccgcttcgggc 279 Query: 254 gcaacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgcca 313 ||||||||||||||||||||||||||||||| ||| ||||| || | | ||| ||| Sbjct: 280 gcaacttcctgcggtgctggcacgggcgcggtgacgattcgcccctcaacatcatcccca 339 Query: 314 tcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgg 373 ||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| | Sbjct: 340 tcaacgacaccggaggcgtgaagcaggcgtcgcaccgcctcaagtacaactccacgctcg 399 Query: 374 gcatcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaagg 433 ||||||||||||| |||||||||||||||||||| ||| | |||||||||| || ||| Sbjct: 400 gcatcttcgacgccgacgtcaagcccgtgggcgagaacccgctctccgtcgagggggagg 459 Query: 434 tgatcaaggtcgt 446 ||||||||||||| Sbjct: 460 tgatcaaggtcgt 472
>gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogenase mRNA, 5' end Length = 386 Score = 381 bits (192), Expect = e-102 Identities = 279/308 (90%) Strand = Plus / Plus Query: 76 gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 135 |||||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 72 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 131 Query: 136 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 195 ||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||| Sbjct: 132 gacttcatgtccgccgtctccttcaggacccacgcggtcggtacgagcggcgggccgcgg 191 Query: 196 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 255 ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 192 cgggcgccgacggaggcaaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 251 Query: 256 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 315 ||||||||||||||||||||||||||||||||| ||||| || || || ||||||||| Sbjct: 252 aacttcctgcggtgctggcacgggcgcggcgacgcgtcgcccctcgacgtcatcgccatc 311 Query: 316 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 375 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 312 aacgacaccggaggcgtcaagcaggcgtcccacctgctcaagtacgactccacgctcggc 371 Query: 376 atcttcga 383 |||||||| Sbjct: 372 atcttcga 379
>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 5922 Score = 341 bits (172), Expect = 1e-90 Identities = 234/255 (91%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 |||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| Sbjct: 2030 ggcgccgacggaggcgaagctcaaggtggccataaacgggttcggccgcatcgggcgcaa 2089 Query: 258 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 317 ||||||||||||||||||||||||||||||| |||||| || || || ||||||||||| Sbjct: 2090 cttcctgcggtgctggcacgggcgcggcgacgactcgcccctcgacgtcatcgccatcaa 2149 Query: 318 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 377 ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2150 cgacaccgggggcgtcaagcaggcgtcgcacctgctcaagtacgactccacgctcggcat 2209 Query: 378 cttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgat 437 ||||||||| |||||| ||||||| |||||||||||||||||||| ||||||||||| || Sbjct: 2210 cttcgacgccgacgtcgagcccgtcggcgacaacgccatctccgtggacggcaaggtcat 2269 Query: 438 caaggtcgtgtncga 452 ||| ||||||| ||| Sbjct: 2270 caaagtcgtgtccga 2284 Score = 109 bits (55), Expect = 8e-21 Identities = 76/83 (91%) Strand = Plus / Plus Query: 91 aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 150 |||||||| ||||||||||| | || ||||||||||||||||||||||||||||||||| Sbjct: 1757 aggagctccgcgtcgctgccgatgcgccggaatgccacctccgacgacttcatgtccgcc 1816 Query: 151 gtctccttcaggacatacgcggt 173 |||||||||||||| ||||||| Sbjct: 1817 gtctccttcaggacccacgcggt 1839
>gb|AF010582.1|AF010582 Oryza sativa glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA, partial cds Length = 804 Score = 323 bits (163), Expect = 3e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 244 cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggag 303 |||||||||||||||||||||||||||||||||||||||||| |||||||||| || || Sbjct: 7 cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcaacagctcgcccctcgac 66 Query: 304 gtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgac 363 || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || Sbjct: 67 gtcatcgccatcaacaacaccggaggcgtgaagcaggcgtcgcacctcctcaagtacaac 126 Query: 364 tccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtc 423 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127 tccacgctcggcatcttcgacgccgacgtcaagcccgtgggcgacaacgccatctccgtc 186 Query: 424 gacggcaaggtgatcaaggtcgt 446 ||||||||||||||||||||||| Sbjct: 187 gacggcaaggtgatcaaggtcgt 209
>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate dehydrogenase subunit A Length = 8839 Score = 285 bits (144), Expect = 6e-74 Identities = 227/255 (89%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 5211 ggcgccgacagaggcaaagctcaaggtggccatcaacgggttcggtcgcatcgggcgtaa 5270 Query: 258 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 317 |||||||||||||||||||||||||| |||| |||||| || || || ||||||||||| Sbjct: 5271 cttcctgcggtgctggcacgggcgcgacgacgactcgcccctcgacgtcatcgccatcaa 5330 Query: 318 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 377 ||||||||| ||||| ||||||||||| ||||| ||||||||| |||||| ||| ||||| Sbjct: 5331 cgacaccgggggcgtcaagcaggcgtcgcacctgctcaagtacaactccatgctcggcat 5390 Query: 378 cttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgat 437 |||||| || || ||| ||||||| |||||||| ||||||||||| ||||||||||| || Sbjct: 5391 cttcgatgccgatgtcgagcccgtcggcgacaatgccatctccgtggacggcaaggtcat 5450 Query: 438 caaggtcgtgtncga 452 ||||||||||| ||| Sbjct: 5451 caaggtcgtgtccga 5465 Score = 89.7 bits (45), Expect = 7e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 91 aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 150 |||||||| ||||||||||| | || ||||||||||||||||||| |||||||||||| Sbjct: 4928 aggagctccgcgtcgctgccgatgcgctggaatgccacctccgacgaattcatgtccgcc 4987 Query: 151 gtctccttcagga 163 ||||||||||||| Sbjct: 4988 gtctccttcagga 5000
>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full insert sequence Length = 778 Score = 200 bits (101), Expect = 3e-48 Identities = 175/199 (87%), Gaps = 3/199 (1%) Strand = Plus / Plus Query: 18 ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74 ||||||||||||||||||||||||| | |||| | |||||||||||| ||| || Sbjct: 39 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 98 Query: 75 ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 134 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 158 Query: 135 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 194 |||||||||| ||| |||||||||||||| ||||||| |||||||||||||| |||| Sbjct: 159 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 218 Query: 195 gaaggcgccgacggaggcg 213 | |||||||||||||||| Sbjct: 219 gcgggcgccgacggaggcg 237
>gb|DQ270265.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1437 Score = 135 bits (68), Expect = 1e-28 Identities = 178/214 (83%), Gaps = 3/214 (1%) Strand = Plus / Plus Query: 228 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcga 287 ||||||||||||||||||||| || |||||||||||||||||||||||||| || | | Sbjct: 3 gatcaacgggttcgggcgcattggccgcaacttcctgcggtgctggcacggtcggg---a 59 Query: 288 cagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtccca 347 | |||||| || ||||| |||||||||||||| | || || || ||||||||||| || Sbjct: 60 gaactcgcctctcgaggttgtcgccatcaacgactctggtggggttaagcaggcgtctca 119 Query: 348 cctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcga 407 |||||| ||||| ||||||| ||| |||| |||| ||| || |||||| | || |||| Sbjct: 120 cctcctgaagtatgactccatgctcggcacgttcgccgccgatgtcaaggctgtcagcga 179 Query: 408 caacgccatctccgtcgacggcaaggtgatcaag 441 || |||||||||||||||||||| |||||||| Sbjct: 180 tgacaccatctccgtcgacggcaagctgatcaag 213
>gb|AY103974.1| Zea mays PCO123560 mRNA sequence Length = 1889 Score = 125 bits (63), Expect = 1e-25 Identities = 185/225 (82%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 208 gaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 267 ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||| ||| Sbjct: 479 gaggcgaagctgaaggtggcgatcaacggcttcggccgcatcggccggaacttcctccgg 538 Query: 268 tgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaacgacaccgga 327 ||||||||||| |||| || ||||||| | || || ||| | | ||||||| |||| Sbjct: 539 tgctggcacggccgcgagga---ctcgccgatcgacgtcgtcgtcgtgaacgacagcgga 595 Query: 328 ggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcg 387 ||||| | | | |||||||||||||||||||||||||| | ||| |||| |||| | || Sbjct: 596 ggcgtcaggaacgcgtcccacctcctcaagtacgactcgatgctcggcaccttcaaggcc 655 Query: 388 gacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaag 432 ||||||||| ||||| ||||| ||||| ||||||||||||| Sbjct: 656 gacgtcaagatcgtggacgacacgaccatcagcgtcgacggcaag 700
>ref|XM_493811.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 117 bits (59), Expect = 3e-23 Identities = 202/249 (81%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 213 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 272 Query: 258 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 317 |||||| ||||||||||||| | |||| | ||| ||||| ||||| ||| | |||| Sbjct: 273 cttcctccggtgctggcacgaac---gcgagaactccccgctcgaggtcgtcgtcgtcaa 329 Query: 318 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 377 ||||| ||||||||| | | | || || ||||| |||||||||||||| | ||| |||| Sbjct: 330 cgacagcggaggcgtcaggaacgcatcacaccttctcaagtacgactcgatgctcggcac 389 Query: 378 cttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgat 437 |||| | || ||||||||| ||| | |||| | ||||| ||||||||||||| |||| Sbjct: 390 cttcaaggccgacgtcaagatcgtcgacgaccagaccatcagcgtcgacggcaagctgat 449 Query: 438 caaggtcgt 446 ||||||||| Sbjct: 450 caaggtcgt 458
>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full insert sequence Length = 1668 Score = 117 bits (59), Expect = 3e-23 Identities = 202/249 (81%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 268 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 327 Query: 258 cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 317 |||||| ||||||||||||| | |||| | ||| ||||| ||||| ||| | |||| Sbjct: 328 cttcctccggtgctggcacgaac---gcgagaactccccgctcgaggtcgtcgtcgtcaa 384 Query: 318 cgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggcat 377 ||||| ||||||||| | | | || || ||||| |||||||||||||| | ||| |||| Sbjct: 385 cgacagcggaggcgtcaggaacgcatcacaccttctcaagtacgactcgatgctcggcac 444 Query: 378 cttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacggcaaggtgat 437 |||| | || ||||||||| ||| | |||| | ||||| ||||||||||||| |||| Sbjct: 445 cttcaaggccgacgtcaagatcgtcgacgaccagaccatcagcgtcgacggcaagctgat 504 Query: 438 caaggtcgt 446 ||||||||| Sbjct: 505 caaggtcgt 513
>gb|DQ270269.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds Length = 1481 Score = 111 bits (56), Expect = 2e-21 Identities = 133/158 (84%), Gaps = 3/158 (1%) Strand = Plus / Plus Query: 208 gaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 267 ||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||| Sbjct: 158 gaggcgaagctcaaggttgccatcaatggcttcggccgcatcgggcgcaacttcctgcgc 217 Query: 268 tgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaacgacaccgga 327 |||||| | | || |||| | ||| || || |||||| |||| |||||||||| ||| Sbjct: 218 tgctgg---gtgggccgcgagaactctcccctcgaggtggtcgcgatcaacgacagcggc 274 Query: 328 ggcgtgaagcaggcgtcccacctcctcaagtacgactc 365 || |||||||||||| | ||||| |||||||||||||| Sbjct: 275 ggggtgaagcaggcggcgcacctgctcaagtacgactc 312
>gb|DQ270268.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit B (gapB) mRNA, complete cds Length = 1444 Score = 103 bits (52), Expect = 5e-19 Identities = 136/164 (82%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgc 282 ||||| |||||||| ||||| ||||| || ||||||||||| || ||||||||||| ||| Sbjct: 282 gtggccatcaacggcttcggacgcattggtcgcaacttcctccgctgctggcacggtcgc 341 Query: 283 ggcgacagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcg 342 || || | ||||| || || ||||||||||||||| ||||||| || |||||||| Sbjct: 342 ggtgatgacagcccgctcgaagtcatcgccatcaacgactccggaggtgtcaagcaggcc 401 Query: 343 tcccacctcctcaagtacgactccacgctgggcatcttcgacgc 386 | |||||||||||||||||||||| ||| |||| |||| |||| Sbjct: 402 actcacctcctcaagtacgactccatgctcggcaccttcaacgc 445
>gb|DQ270262.1| Chara vulgaris glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 956 Score = 99.6 bits (50), Expect = 8e-18 Identities = 56/58 (96%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 367 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 88 gccatcaacgacaccggaggagtgaagcaggcctcccacctcctcaagtacgactcca 145
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 1643182 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643241 Query: 258 cttcctgcggtgctggcacg 277 |||||| ||||||||||||| Sbjct: 1643242 cttcctccggtgctggcacg 1643261 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 337 caggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaag 396 ||||| || ||||| |||||||||||||| | ||| |||| |||| | || ||||||||| Sbjct: 1643432 caggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaag 1643491 Query: 397 cccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgt 446 ||| | |||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 1643492 atcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgt 1643541
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 50628 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 50687 Query: 258 cttcctgcggtgctggcacg 277 |||||| ||||||||||||| Sbjct: 50688 cttcctccggtgctggcacg 50707 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 337 caggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaag 396 ||||| || ||||| |||||||||||||| | ||| |||| |||| | || ||||||||| Sbjct: 50878 caggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaag 50937 Query: 397 cccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgt 446 ||| | |||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 50938 atcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgt 50987
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 122743 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 122802 Query: 258 cttcctgcggtgctggcacg 277 |||||| ||||||||||||| Sbjct: 122803 cttcctccggtgctggcacg 122822 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 337 caggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaag 396 ||||| || ||||| |||||||||||||| | ||| |||| |||| | || ||||||||| Sbjct: 122993 caggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaag 123052 Query: 397 cccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgt 446 ||| | |||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 123053 atcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgt 123102
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 1643180 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643239 Query: 258 cttcctgcggtgctggcacg 277 |||||| ||||||||||||| Sbjct: 1643240 cttcctccggtgctggcacg 1643259 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 337 caggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaag 396 ||||| || ||||| |||||||||||||| | ||| |||| |||| | || ||||||||| Sbjct: 1643430 caggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaag 1643489 Query: 397 cccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgt 446 ||| | |||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 1643490 atcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgt 1643539
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 198 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || ||||| Sbjct: 55645 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 55704 Query: 258 cttcctgcggtgctggcacg 277 |||||| ||||||||||||| Sbjct: 55705 cttcctccggtgctggcacg 55724 Score = 60.0 bits (30), Expect = 7e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 337 caggcgtcccacctcctcaagtacgactccacgctgggcatcttcgacgcggacgtcaag 396 ||||| || ||||| |||||||||||||| | ||| |||| |||| | || ||||||||| Sbjct: 55895 caggcatcacaccttctcaagtacgactcgatgctcggcaccttcaaggccgacgtcaag 55954 Query: 397 cccgtgggcgacaacgccatctccgtcgacggcaaggtgatcaaggtcgt 446 ||| | |||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 55955 atcgtcgacgaccagaccatcagcgtcgacggcaagctgatcaaggtcgt 56004
>gb|DQ270259.1| Scherffelia dubia glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1210 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 219 caaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 278 ||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 172 caaggtggccatcaacggcttcggccgcatcggccgcaacttcctgcgctgctggcacgg 231 Query: 279 gcgcgg 284 ||||| Sbjct: 232 ccgcgg 237 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 368 |||||||||||| |||| || ||||||||||| |||||||| || |||||||||||||| Sbjct: 263 gccatcaacgactccggcggtgtgaagcaggcctcccacctgctgaagtacgactccac 321
>gb|DQ301767.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1330 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 316 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 375 |||||| |||| || ||||||||||| || ||||| || ||||||||| ||||||||||| Sbjct: 220 aacgactccggcggtgtgaagcaggcctctcacctgctgaagtacgacaccacgctgggc 279 Query: 376 atcttcgacgcggacgtcaagcccgtgggcgacaa 410 | |||||||| || |||||| |||||| |||||| Sbjct: 280 aagttcgacgctgatgtcaaggccgtggacgacaa 314 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 273 ||||| |||||||| ||||| ||||| || |||||||||||||| |||||| Sbjct: 130 gtggccatcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 180
>gb|DQ301766.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1478 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 316 aacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctgggc 375 |||||| |||| || ||||||||||| || ||||| || ||||||||| ||||||||||| Sbjct: 226 aacgactccggcggtgtgaagcaggcctctcacctgctgaagtacgacaccacgctgggc 285 Query: 376 atcttcgacgcggacgtcaagcccgtgggcgacaa 410 | |||||||| || |||||| |||||| |||||| Sbjct: 286 aagttcgacgctgatgtcaaggccgtggacgacaa 320 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 273 ||||| |||||||| ||||| ||||| || |||||||||||||| |||||| Sbjct: 136 gtggccatcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 186
>gb|DQ270263.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, partial cds Length = 1239 Score = 77.8 bits (39), Expect = 3e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 298 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 357 |||||| || |||||||||||||||||||||| || |||||||| || ||||| || ||| Sbjct: 76 ctggagctggtcgccatcaacgacaccggaggtgtcaagcaggcctctcacctgctgaag 135 Query: 358 tacgactccacgctgggca 376 |||||||||| ||| |||| Sbjct: 136 tacgactccatgctcggca 154
>emb|AJ246009.1|CAN246009 Capsicum annuum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA2 Length = 936 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 369 |||||||| ||| | ||||| || ||||| || || |||||||||||||||||||| || Sbjct: 82 gccatcaatgactctggaggtgtcaagcaagcctctcacctcctcaagtacgactctacc 141 Query: 370 ctgggcatcttcgacgcggacgtcaagcc 398 || |||||||| ||||| ||||||||||| Sbjct: 142 cttggcatctttgacgctgacgtcaagcc 170
>dbj|AB035312.1| Chlamydomonas sp. W80 gap-1 mRNA for NADP-glyceraldehyde-3-phosphate dehydrogenase, complete cds Length = 1311 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 313 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacgctg 372 ||||||||| | || || || ||||||||||| ||||| |||||||||||||||| ||| Sbjct: 227 atcaacgactcgggcggtgtcaagcaggcgtcgcacctgctcaagtacgactccatcctg 286 Query: 373 ggcatcttcgacgcggacgtcaagcccgtgggcgaca 409 |||| ||||||||| || |||||| ||||| ||||| Sbjct: 287 ggcaccttcgacgccgaggtcaagatcgtggacgaca 323
>emb|AJ246027.2|MPO246027 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate dehydrogenase, subunit GapB Length = 1770 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 229 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcgg 284 |||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 341 atcaacgggttcggtcgtatcggtcgcaacttcctgcgctgctggcacggacgcgg 396
>emb|AJ252208.1|CFU252208 Scenedesmus vacuolatus partial mRNA for NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (phosphorylating), (gapA gene) Length = 941 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 298 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 357 ||||||||||| |||||||||||| |||| |||||||||||||| |||||| || ||| Sbjct: 64 ctggaggtgattgccatcaacgactccggtggcgtgaagcaggccagccacctgctgaag 123 Query: 358 tacgactc 365 |||||||| Sbjct: 124 tacgactc 131
>gb|L27668.1|CRECPGAPA Chlamydomonas reinhardtii chloroplast glyceraldehyde-3-phosphate dehydrogenase (gapA) gene, complete cds Length = 2219 Score = 71.9 bits (36), Expect = 2e-09 Identities = 125/154 (81%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgc 282 ||||| |||||||| ||||| ||||| || |||||||||||||| ||||||||||| | Sbjct: 613 gtggccatcaacggcttcggtcgcattggccgcaacttcctgcgctgctggcacggtc-- 670 Query: 283 ggcgacagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcg 342 || | | | | | |||||| ||| | ||||||||||||| ||| || || |||||||| Sbjct: 671 -gccagaacaccctgctggacgtggttgccatcaacgacagcggcggtgtcaagcaggcc 729 Query: 343 tcccacctcctcaagtacgactccacgctgggca 376 |||||| || |||||||||||||| ||||||| Sbjct: 730 agccacctgctgaagtacgactccaccctgggca 763
>emb|AJ246026.1|MPO246026 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 1443 Score = 69.9 bits (35), Expect = 7e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 299 tggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagt 358 ||||||| ||| |||||||||||||||||| || ||||| || |||||| | || |||| Sbjct: 291 tggaggtcgtcgtcatcaacgacaccggaggtgtcaagcaagcctcccacttgctgaagt 350 Query: 359 acgactccacgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgccatct 418 |||| |||| ||| || ||||| || || | |||||| | || || ||| ||||||||| Sbjct: 351 acgattccatgctcggtatctttgatgcctatgtcaaggcagtcggtgacgacgccatct 410 Query: 419 ccgtcgacggcaaggtgatcaag 441 |||| ||||||||| | |||||| Sbjct: 411 ccgtggacggcaagatcatcaag 433
>dbj|AK109016.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A07, full insert sequence Length = 1712 Score = 69.9 bits (35), Expect = 7e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 369 |||||||||||| |||| || ||||||||||| |||||| ||||||||||||||||| Sbjct: 259 gccatcaacgactccggtggtgtgaagcaggccagccacctgctcaagtacgactccacc 318 Query: 370 ctgggca 376 ||||||| Sbjct: 319 ctgggca 325
>gb|DQ270267.1| Physcomitrella patens glyceraldehyde-3-phosphate dehydrogenase subunit A2 (gapA2) mRNA, partial cds Length = 1238 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 312 catcaacgacaccggaggcgtgaagcaggcgtc 344 ||||||||||||||||||||||||||||||||| Sbjct: 54 catcaacgacaccggaggcgtgaagcaggcgtc 86 Score = 40.1 bits (20), Expect = 6.1 Identities = 37/43 (86%) Strand = Plus / Plus Query: 410 acgccatctccgtcgacggcaaggtgatcaaggtcgtgtncga 452 |||||||| ||| ||||||||||| |||||||| |||| ||| Sbjct: 152 acgccatcagcgtggacggcaaggtcatcaaggtggtgtccga 194
>gb|DQ122925.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) gene, partial cds; nuclear gene for chloroplast product Length = 1772 Score = 63.9 bits (32), Expect = 4e-07 Identities = 124/154 (80%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgc 282 ||||| || ||||| || || ||||| || |||||||||||||| ||||||||||| | Sbjct: 257 gtggccattaacggctttggtcgcattggccgcaacttcctgcgctgctggcacggtc-- 314 Query: 283 ggcgacagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcg 342 || | | | | | |||||| ||| ||||||||||||||| ||| || || |||||||| Sbjct: 315 -gccagaacaccctgctggacgtggtcgccatcaacgacagcggcggtgtcaagcaggcc 373 Query: 343 tcccacctcctcaagtacgactccacgctgggca 376 |||||| || |||||||||||||| ||||||| Sbjct: 374 agccacctgctgaagtacgactccaccctgggca 407
>gb|DQ122894.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate dehydrogenase (GapA) mRNA, partial cds; nuclear gene for chloroplast product Length = 1708 Score = 63.9 bits (32), Expect = 4e-07 Identities = 124/154 (80%), Gaps = 3/154 (1%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgc 282 ||||| || ||||| || || ||||| || |||||||||||||| ||||||||||| | Sbjct: 103 gtggccattaacggctttggtcgcattggccgcaacttcctgcgctgctggcacggtc-- 160 Query: 283 ggcgacagctcgccgctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcg 342 || | | | | | |||||| ||| ||||||||||||||| ||| || || |||||||| Sbjct: 161 -gccagaacaccctgctggacgtggtcgccatcaacgacagcggcggtgtcaagcaggcc 219 Query: 343 tcccacctcctcaagtacgactccacgctgggca 376 |||||| || |||||||||||||| ||||||| Sbjct: 220 agccacctgctgaagtacgactccaccctgggca 253
>gb|DQ270266.1| Physcomitrella patens glyceraldehyde-3-phosphate dehydrogenase subunit A1 (gapA1) mRNA, partial cds Length = 1444 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 312 catcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 367 |||||| ||||||||||| ||||||||||| || ||||| || ||||||||||||| Sbjct: 219 catcaatgacaccggaggtgtgaagcaggcctctcacctgctgaagtacgactcca 274
>emb|AJ246029.2|KFL246029 Klebsormidium flaccidum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 949 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 313 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 367 ||||||||||||||||| || |||||||| |||||| | || ||||||||||||| Sbjct: 93 atcaacgacaccggaggtgtcaagcaggcctcccacttgctgaagtacgactcca 147 Score = 48.1 bits (24), Expect = 0.025 Identities = 39/44 (88%) Strand = Plus / Plus Query: 235 gggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 278 ||||||||| | || |||||||||||||| ||||||||| |||| Sbjct: 18 gggttcgggaggattgggcgcaacttcctccggtgctggaacgg 61
>emb|AJ246030.1|SSP246030 Spirogyra sp. mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA Length = 956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 307 atcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcc 366 ||||||||||||||||| ||||| || || || || |||| |||||||||||||| ||| Sbjct: 85 atcgccatcaacgacactggaggagttaaacaagccgcccatctcctcaagtacgattcc 144 Query: 367 acgctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgac 426 | ||| || |||||| | || || ||||| || | |||||| |||||||||||||| Sbjct: 145 atgctcggaatcttcaatgccgatgtcaaaatcgctgatgacaactccatctccgtcgac 204 Query: 427 ggcaaggtgatcaaggtcgt 446 || ||| | ||||| ||||| Sbjct: 205 ggaaagatcatcaaagtcgt 224
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 218 tcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 257 ||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 2085730 tcaaggttgcgatcaacggtttcggacgcatcgggcgcaa 2085691
>emb|AJ246031.1|SCU246031 Sphagnum cuspidatum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA1 Length = 956 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 334 aagcaggcgtcccacctcctcaagtacgactccacgctgggca 376 |||||||| ||||||||||| |||||||| |||| |||||||| Sbjct: 112 aagcaggcatcccacctcctgaagtacgattccatgctgggca 154
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 368 |||||||||||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 17907 gccatcaacgacaccggaggtgtaaagcaagcctctcaccttctcaagtatgattccac 17849
>gb|L76552.1|SPIGDND Spinacia oleracea NADP-dependent glyceraldehydephosphate dehydrogenase subunit A mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 1397 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 313 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 367 ||||||||||| ||||| ||||| || || |||||||| || ||||||||||||| Sbjct: 328 atcaacgacactggaggtgtgaaacaagcttcccaccttctaaagtacgactcca 382
>gb|DQ224370.1| Glycine max glyceraldehyde-3-phosphate dehydrogenase A subunit mRNA, complete cds Length = 1212 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactcca 367 ||||||||||||||||| |||||||| || || || ||||| ||||| ||||| |||| Sbjct: 295 gccatcaacgacaccggcggcgtgaaacaagcctctcaccttctcaaatacgattcca 352
>gb|AY273819.1| Porphyra yezoensis glyceraldehyde-3-phosphate dehydrogenase subunit A (GAPA) mRNA, complete cds Length = 1404 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 213 gaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcg 266 ||||||||||||||| |||| ||| || || ||||| || |||||||||||||| Sbjct: 317 gaagctcaaggtggctatcagcggctttggccgcattggccgcaacttcctgcg 370
>gb|BT012685.1| Lycopersicon esculentum clone 113533R, mRNA sequence Length = 1501 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 369 |||||||| ||||| || || || ||||| || || ||||| ||||| || |||||||| Sbjct: 405 gccatcaatgacactggtggtgtcaagcaagcctctcaccttctcaaatatgactccacc 464 Query: 370 ctgggcatcttcgacgcggacgtcaagcc 398 || |||||||| || || ||||||||||| Sbjct: 465 cttggcatctttgatgctgacgtcaagcc 493
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Plus Query: 229 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 273 |||||||| |||||| | ||||||||||||||| |||| |||||| Sbjct: 567772 atcaacggcttcgggaggatcgggcgcaacttcttgcgctgctgg 567816
>gb|DQ270258.1| Cyanophora paradoxa glyceraldehyde-3-phosphate dehydrogenase subunit A (gapA) mRNA, complete cds Length = 1442 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 308 tcgccatcaacgacaccggaggcg 331 |||||||||||||||||||||||| Sbjct: 320 tcgccatcaacgacaccggaggcg 343 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 230 tcaacgggttcgggcgcatcgggcgcaacttc 261 ||||||| ||||||||||| || ||||||||| Sbjct: 245 tcaacggcttcgggcgcattggccgcaacttc 276
>emb|X16595.1|TAYT1GAP Thermus aquaticus gap gene for glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) Length = 1393 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 344 cccacctcctcaagtacgactcca 367 |||||||||||||||||||||||| Sbjct: 407 cccacctcctcaagtacgactcca 430
>gb|AF162202.1|AF162202 Lactuca sativa NADP-dependent glyceraldehyde phosphate dehydrogenase, partial cds Length = 350 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Plus Query: 204 gacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgg 251 |||||| || ||||| ||||| ||||||||||| |||||||| ||||| Sbjct: 199 gacggaagcaaagctgaaggtagcgatcaacggattcgggcgtatcgg 246 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 298 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 357 ||||| || |||||||| ||||||||||| || || || || || |||||||| |||||| Sbjct: 290 ctggatgtcatcgccattaacgacaccggcggtgtcaaacaagcatcccaccttctcaag 349 Query: 358 t 358 | Sbjct: 350 t 350
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 48.1 bits (24), Expect = 0.025 Identities = 30/32 (93%) Strand = Plus / Minus Query: 410 acgccatctccgtcgacggcaaggtgatcaag 441 |||||||| |||||||||||||| |||||||| Sbjct: 5112231 acgccatcgccgtcgacggcaagctgatcaag 5112200
>emb|AJ246032.1|SCU246032 Sphagnum cuspidatum mRNA for partial glyceraldehyde-3-phosphate dehydrogenase, subunit GapA2 Length = 852 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 334 aagcaggcgtcccacctcctcaagtacgactccacgctgggca 376 |||||||| ||||||||||| || ||||| |||| |||||||| Sbjct: 9 aagcaggcatcccacctcctgaaatacgattccatgctgggca 51
>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence Length = 189532 Score = 46.1 bits (23), Expect = 0.099 Identities = 23/23 (100%) Strand = Plus / Minus Query: 60 ccaggggggcatgctggagttct 82 ||||||||||||||||||||||| Sbjct: 154385 ccaggggggcatgctggagttct 154363
>gb|U29134.1|XFU29134 Xanthobacter flavus transketolase (CbbT) and class II fructose-1,6-bisphosphate aldolase (CbbA) genes, complete cds, and pentose-5-phosphate-3-epimerase (Cbbe) gene, partial cds Length = 4031 Score = 46.1 bits (23), Expect = 0.099 Identities = 29/31 (93%) Strand = Plus / Plus Query: 405 cgacaacgccatctccgtcgacggcaaggtg 435 |||||||| ||||||| |||||||||||||| Sbjct: 929 cgacaacggcatctccatcgacggcaaggtg 959
>gb|M14417.1|TOBGAPA Tobacco (N.tabacum) GapA mRNA encoding A-subunit of chloroplast glyceradehyde-3-phosphate dehydrogenase Length = 1327 Score = 46.1 bits (23), Expect = 0.099 Identities = 95/119 (79%) Strand = Plus / Plus Query: 310 gccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccacg 369 |||||||| ||||| || || || ||||| || || ||||| || || || |||||||| Sbjct: 262 gccatcaatgacactggtggtgtcaagcaagcctctcaccttcttaaatatgactccacc 321 Query: 370 ctgggcatcttcgacgcggacgtcaagcccgtgggcgacaacgccatctccgtcgacgg 428 || |||||||| || || || ||||||||||| ||| ||| ||||||||||||||| Sbjct: 322 cttggcatctttgatgctgatgtcaagcccgtcggcactgacggcatctccgtcgacgg 380
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.39 Identities = 37/42 (88%) Strand = Plus / Minus Query: 226 gcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 267 ||||||||||| ||||| |||||||| |||| | |||||||| Sbjct: 933500 gcgatcaacggattcggccgcatcggccgcaccatcctgcgg 933459
>ref|XM_607139.2| PREDICTED: Bos taurus similar to Protein C14orf115 (LOC528708), mRNA Length = 2103 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 375 catcttcgacgcggacgtcaag 396 |||||||||||||||||||||| Sbjct: 465 catcttcgacgcggacgtcaag 486
>ref|XM_547904.1| PREDICTED: Canis familiaris similar to Protein C14orf115 (LOC490782), mRNA Length = 2082 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 375 catcttcgacgcggacgtcaag 396 |||||||||||||||||||||| Sbjct: 465 catcttcgacgcggacgtcaag 486
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 229 atcaacgggttcgggcgcatcgggcgcaac 258 |||||||| ||||| ||||||||||||||| Sbjct: 264340 atcaacggattcggccgcatcgggcgcaac 264311
>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster, complete sequence Length = 49461 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 206 cggaggcgaagctcaaggtggc 227 |||||||||||||||||||||| Sbjct: 40058 cggaggcgaagctcaaggtggc 40037
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 412 gccatctccgtcgacggcaaggtgatcaag 441 |||||| |||||||||||||| |||||||| Sbjct: 4190231 gccatcaccgtcgacggcaagctgatcaag 4190202
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcgca 256 |||||||||||||| ||||| |||||||| |||| Sbjct: 2308628 gtggcgatcaacggcttcggacgcatcggccgca 2308661
>gb|U44856.1|SAU44856 Streptomyces arenae pentalenolactone-insensitive glyceraldehyde-3-phosphate dehydrogenase (gapR) gene, complete cds Length = 1594 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 229 atcaacgggttcgggcgcatcgggcgcaac 258 |||||||| |||||||||||||| |||||| Sbjct: 373 atcaacggcttcgggcgcatcggccgcaac 402
>ref|XM_675899.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN7722.2), mRNA Length = 1395 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 aacgccatctccgtcgacggc 429 ||||||||||||||||||||| Sbjct: 757 aacgccatctccgtcgacggc 777
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 cagctcgccgctggaggtgatcgcc 312 |||||||||||||| |||||||||| Sbjct: 5278875 cagctcgccgctggtggtgatcgcc 5278899
>gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat) gene, partial sequence Length = 321 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ctgaggagctcgtcgtcgctg 108 ||||||||||||||||||||| Sbjct: 258 ctgaggagctcgtcgtcgctg 238
>gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat) gene, partial sequence Length = 321 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ctgaggagctcgtcgtcgctg 108 ||||||||||||||||||||| Sbjct: 258 ctgaggagctcgtcgtcgctg 238
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 414 catctccgtcgacggcaaggtgatcaaggtcgt 446 |||| |||||||||||||||| | ||||||||| Sbjct: 27222 catcaccgtcgacggcaaggtcaccaaggtcgt 27190
>emb|AJ318383.1|SSP318383 Spirulina sp. PCC 6313 partial gap2 gene for NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase Length = 939 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ctcaagtacgactccacgctgggca 376 |||||||||||||||| |||||||| Sbjct: 118 ctcaagtacgactccatgctgggca 142
>emb|AJ252120.1|PSP252120 Pseudanabaena sp. strain PCC 6903 partial gap2 gene for NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) Length = 938 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ctcaagtacgactccacgctgggca 376 |||||||||||||||| |||||||| Sbjct: 118 ctcaagtacgactccatgctgggca 142
>gb|AE005686.1| Caulobacter crescentus CB15 section 12 of 359 of the complete genome Length = 11992 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Plus Query: 302 aggtgatcgccatcaacgacaccggaggcgtgaagca 338 |||||||| ||||| |||||||| |||||||||||| Sbjct: 7629 aggtgatcttcatcaccgacaccgaaggcgtgaagca 7665
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 gcgcggcgacagctcgccgct 299 ||||||||||||||||||||| Sbjct: 1843399 gcgcggcgacagctcgccgct 1843379
>gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosphate dehydrogenase homolog (gapdh) gene, complete cds; and phosphoglycerate kinase gene, partial cds Length = 2530 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 atcaacgggttcgggcgcatcgggcgcaacttc 261 |||||||| ||||| || ||||||||||||||| Sbjct: 360 atcaacggcttcggtcgaatcgggcgcaacttc 392
>gb|AE004716.1| Pseudomonas aeruginosa PAO1, section 277 of 529 of the complete genome Length = 11610 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 cagctcgccgctggaggtgatcgcc 312 |||||||||||||| |||||||||| Sbjct: 8192 cagctcgccgctggtggtgatcgcc 8216
>ref|XM_315755.2| Anopheles gambiae str. PEST ENSANGP00000018681 (ENSANGG00000016192), partial mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 423 cgacggcaaggtgatcaaggtcgtg 447 ||||||||||||||||||| ||||| Sbjct: 1179 cgacggcaaggtgatcaagttcgtg 1203
>gb|AF162198.1|AF162198 Lactuca sativa NADP-dependent glyceraldehyde phosphate dehydrogenase mRNA, partial cds Length = 447 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 298 ctggaggtgatcgccatcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaag 357 ||||| || |||||||| ||||||||||| || || || || || |||||||| |||||| Sbjct: 387 ctggatgtcatcgccattaacgacaccggcggtgtcaaacaagcatcccaccttctcaag 446 Query: 358 t 358 | Sbjct: 447 t 447 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 220 aaggtggcgatcaacgggttcgggcgcatcgg 251 ||||| ||||||||||| |||||||| ||||| Sbjct: 312 aaggtagcgatcaacggattcgggcgtatcgg 343
>gb|AF170561.1|AF170561 Streptomyces coelicolor SdrD (sdrD) gene, complete cds Length = 2568 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 414 catctccgtcgacggcaaggtgatcaaggtcgt 446 |||| |||||||||||||||| | ||||||||| Sbjct: 1905 catcaccgtcgacggcaaggtcaccaaggtcgt 1937
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgcggtgagcacgagcggcgg 188 ||||||||||||||||||||| Sbjct: 1509597 cgcggtgagcacgagcggcgg 1509577
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 229 atcaacgggttcgggcgcatcgggcgcaacttc 261 |||||||| ||||| || ||||||||||||||| Sbjct: 1221918 atcaacggcttcggtcgaatcgggcgcaacttc 1221950
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 tcgccgctggaggtgatcgcc 312 ||||||||||||||||||||| Sbjct: 118648 tcgccgctggaggtgatcgcc 118628
>gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ctgaggagctcgtcgtcgctg 108 ||||||||||||||||||||| Sbjct: 207 ctgaggagctcgtcgtcgctg 187
>ref|XM_483629.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 agctcgtcgtcgctgccgct 113 |||||||||||||||||||| Sbjct: 501 agctcgtcgtcgctgccgct 482
>gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) gene, partial cds Length = 297 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 211 tgaggagctcgtcgtcgctg 192
>gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) gene, partial cds Length = 295 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 208 tgaggagctcgtcgtcgctg 189
>gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) gene, partial cds Length = 292 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 208 tgaggagctcgtcgtcgctg 189
>gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) gene, partial cds Length = 285 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 198 tgaggagctcgtcgtcgctg 179
>gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) gene, partial cds Length = 262 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 175 tgaggagctcgtcgtcgctg 156
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 223 gtggcgatcaacgggttcgggcgcatcgggcg 254 ||||| |||||||| ||||| ||||||||||| Sbjct: 1641330 gtggcaatcaacggcttcggccgcatcgggcg 1641361
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 425 acggcaaggtgatcaaggtc 444 |||||||||||||||||||| Sbjct: 4330157 acggcaaggtgatcaaggtc 4330176
>gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, complete genome Length = 9031 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 5443 tgaggagctcgtcgtcgctg 5424
>gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) gene, partial sequence Length = 321 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 257 tgaggagctcgtcgtcgctg 238
>gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (tat) gene, partial sequence Length = 321 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 257 tgaggagctcgtcgtcgctg 238
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 atcaacgggttcgggcgcatcgggcgca 256 |||||||| ||||| ||||||||||||| Sbjct: 3113498 atcaacggcttcggccgcatcgggcgca 3113471
>emb|X52148.1|CHPSGPA1 Pisum sativum gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase, subunit A Length = 3696 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 313 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 368 ||||| ||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 2153 atcaatgacaccggaggtgtaaagcaagcttctcaccttctcaagtatgattccac 2208
>emb|X15190.1|PSGAPA1 Pea chloroplast GAPA mRNA encoding glyceraldehyde-3-phosphate dehydrogenase (GAPDH) subunit A (EC 1.2.1.13) Length = 1480 Score = 40.1 bits (20), Expect = 6.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 313 atcaacgacaccggaggcgtgaagcaggcgtcccacctcctcaagtacgactccac 368 ||||| ||||||||||| || ||||| || || ||||| |||||||| || ||||| Sbjct: 366 atcaatgacaccggaggtgtaaagcaagcttctcaccttctcaagtatgattccac 421
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctggagttctccgggctg 90 |||||||||||||||||||| Sbjct: 180213 tgctggagttctccgggctg 180232
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctggagttctccgggctg 90 |||||||||||||||||||| Sbjct: 13755 tgctggagttctccgggctg 13774
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 410 acgccatctccgtcgacggcaaggtgatcaag 441 ||||||| ||| |||| ||||||||||||||| Sbjct: 1797305 acgccatttccatcgatggcaaggtgatcaag 1797336
>gb|L81176.2|PSEFLAOP Pseudomonas aeruginosa flagellin (fliC) gene, partial cds; FlaG (flaG), flagellar cap (fliD), FliS (fliS), and FleQ (fleQ) genes, complete cds; and unknown genes Length = 5735 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 gaaggcgccgacggaggcgaagctcaag 222 ||||||||||| ||||||| |||||||| Sbjct: 1406 gaaggcgccgaaggaggcgcagctcaag 1433
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gaggtgatcgccatcaacga 320 |||||||||||||||||||| Sbjct: 4171968 gaggtgatcgccatcaacga 4171987
>gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome Length = 9192 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 5575 tgaggagctcgtcgtcgctg 5556
>gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds Length = 8791 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 5210 tgaggagctcgtcgtcgctg 5191
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acggcaaggtgatcaaggtc 444 |||||||||||||||||||| Sbjct: 11545921 acggcaaggtgatcaaggtc 11545902
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 agctcgtcgtcgctgccgct 113 |||||||||||||||||||| Sbjct: 27356053 agctcgtcgtcgctgccgct 27356034
>gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral protein ZmNIP2-1 mRNA, complete cds Length = 1293 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 ggggggcatgctggagttct 82 |||||||||||||||||||| Sbjct: 282 ggggggcatgctggagttct 263
>gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome Length = 8415 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 4843 tgaggagctcgtcgtcgctg 4824
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 390 cgtcaagcccgtgggcgacaacgccatc 417 |||||||||||| |||||| |||||||| Sbjct: 4238797 cgtcaagcccgtcggcgactacgccatc 4238770
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 agctcgtcgtcgctgccgct 113 |||||||||||||||||||| Sbjct: 57580 agctcgtcgtcgctgccgct 57561
>gb|AF139825.1|AF139825 Pseudomonas aeruginosa strain PA103 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2047 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 gaaggcgccgacggaggcgaagctcaag 222 ||||||||||| ||||||| |||||||| Sbjct: 221 gaaggcgccgaaggaggcgcagctcaag 248
>gb|AF139824.1|AF139824 Pseudomonas aeruginosa strain PAK flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2095 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 gaaggcgccgacggaggcgaagctcaag 222 ||||||||||| ||||||| |||||||| Sbjct: 242 gaaggcgccgaaggaggcgcagctcaag 269
>gb|AF139823.1|AF139823 Pseudomonas aeruginosa strain cs2 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2049 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 gaaggcgccgacggaggcgaagctcaag 222 ||||||||||| ||||||| |||||||| Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
>gb|AF139822.1|AF139822 Pseudomonas aeruginosa strain cs32 flagellar cap protein FliD (fliD) and FliS (fliS) genes, complete cds Length = 2053 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 195 gaaggcgccgacggaggcgaagctcaag 222 ||||||||||| ||||||| |||||||| Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 229 atcaacgggttcgggcgcatcgggcgca 256 |||||||| ||||| ||||||||||||| Sbjct: 2960727 atcaacggcttcggccgcatcgggcgca 2960700
>gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, complete genome Length = 9703 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
>gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, complete genome Length = 9703 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gaggtgatcgccatcaacga 320 |||||||||||||||||||| Sbjct: 4175389 gaggtgatcgccatcaacga 4175408
>dbj|AB095184.1| Cyanidioschyzon merolae gene for Glyceraldehyde 3 phosphate dehydrogenase, complete cds Length = 1023 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 351 cctcaagtacgactccacgc 370 |||||||||||||||||||| Sbjct: 144 cctcaagtacgactccacgc 163
>gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat protein (tat) gene, partial cds Length = 216 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 179 tgaggagctcgtcgtcgctg 160
>gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat protein (tat) gene, partial cds Length = 216 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 179 tgaggagctcgtcgtcgctg 160
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 ccatctccgtcgacggcaag 432 |||||||||||||||||||| Sbjct: 4120563 ccatctccgtcgacggcaag 4120544
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acggcaaggtgatcaaggtc 444 |||||||||||||||||||| Sbjct: 11545592 acggcaaggtgatcaaggtc 11545573
>emb|CR450261.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0013J10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 16142 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 acggcaaggtgatcaaggtc 444 |||||||||||||||||||| Sbjct: 9802 acggcaaggtgatcaaggtc 9783
>gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat protein (tat) gene, partial cds Length = 219 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 179 tgaggagctcgtcgtcgctg 160
>gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat protein (tat) gene, partial cds Length = 219 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 179 tgaggagctcgtcgtcgctg 160
>gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mRNA, partial cds Length = 243 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 206 tgaggagctcgtcgtcgctg 187
>gb|DQ248961.1| Streptomyces davawensis putative RNA polymerase ECF-subfamily sigma factor, putative chitinase precursor, putative riboflavin synthase, putative integral membrane protein, putative dihydroxybutanonphosphate synthase/GTP-cyclohydrolase II, putative 6,7-dimethyl-8-ribityllumazine synthase, and putative phosphoribosyl-ATP-pyrophosphatase genes, complete cds Length = 7320 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 caagtacgactccacgctgg 373 |||||||||||||||||||| Sbjct: 1918 caagtacgactccacgctgg 1899
>gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample 1995, tat protein (tat) gene, partial cds Length = 216 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tgaggagctcgtcgtcgctg 108 |||||||||||||||||||| Sbjct: 179 tgaggagctcgtcgtcgctg 160
>dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein, complete cds (exon1, exon2) Length = 2429 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 agctcgtcgtcgctgccgct 113 |||||||||||||||||||| Sbjct: 704 agctcgtcgtcgctgccgct 685 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,470,120 Number of Sequences: 3902068 Number of extensions: 2470120 Number of successful extensions: 49021 Number of sequences better than 10.0: 149 Number of HSP's better than 10.0 without gapping: 149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46771 Number of HSP's gapped (non-prelim): 2240 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
