Clone Information

BLAST Search Result

Clone Name	baet01g04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein hom...	117	6e-27
2	TCTP_ORYSA (P35681) Translationally-controlled tumor protein hom...	108	3e-24
3	TCTP_FRAAN (O03992) Translationally-controlled tumor protein hom...	103	9e-23
4	TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein hom...	103	1e-22
5	TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein hom...	103	2e-22
6	TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein hom...	100	8e-22
7	TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein hom...	100	1e-21
8	TCTP_PEA (P50906) Translationally-controlled tumor protein homol...	99	3e-21
9	TCTP_SOLTU (P43349) Translationally-controlled tumor protein hom...	99	4e-21
10	TCTP_ARATH (P31265) Translationally-controlled tumor protein hom...	97	8e-21
11	TCTP_MEDSA (P28014) Translationally-controlled tumor protein hom...	93	2e-19
12	TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein hom...	92	4e-19
13	TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein hom...	92	5e-19
14	TCTP_YEAST (P35691) Translationally-controlled tumor protein hom...	52	3e-07
15	TCTP_SCHPO (Q10344) Translationally-controlled tumor protein hom...	52	5e-07
16	TCTP_BRUMA (P90697) Translationally-controlled tumor protein hom...	51	7e-07
17	TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)	50	1e-06
18	TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein hom...	50	2e-06
19	TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP...	48	8e-06
20	TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TC...	48	8e-06
21	TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)	48	8e-06
22	TCTP_CHICK (P43347) Translationally-controlled tumor protein (TC...	47	1e-05
23	TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)	45	4e-05
24	TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TC...	45	4e-05
25	TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)	45	5e-05
26	TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)	45	5e-05
27	TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)	43	2e-04
28	TCTP_CAEEL (Q93573) Translationally-controlled tumor protein hom...	42	5e-04
29	TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)	41	7e-04
30	TCTP_SCHJA (P91800) Translationally-controlled tumor protein hom...	40	0.002
31	TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein hom...	40	0.002
32	TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein hom...	40	0.002
33	TCTP_HYDAT (Q94587) Translationally-controlled tumor protein hom...	37	0.013
34	TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)	37	0.018
35	TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein hom...	37	0.018
36	TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)	36	0.023
37	TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein hom...	36	0.023
38	TCTP_LUMRU (O18477) Translationally-controlled tumor protein hom...	36	0.030
39	TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein hom...	36	0.030
40	FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2	33	0.15
41	YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I	30	1.6
42	MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein k...	29	3.7
43	STP2_MACFA (Q8WNV1) Nuclear transition protein 2 (TP-2) (TP2)	28	4.8
44	ANA_DROME (Q26307) Protein anachronism precursor	28	6.2
45	SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.2
46	SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.2
47	CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity fa...	28	6.2
48	CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity fa...	28	6.2
49	CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity fa...	28	6.2
50	CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity fa...	28	8.2

>TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP)|
           (HTP)
          Length = 168

 Score =  117 bits (294), Expect = 6e-27
 Identities = 55/55 (100%), Positives = 55/55 (100%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 55

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>TCTP_ORYSA (P35681) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  108 bits (271), Expect = 3e-24
 Identities = 49/55 (89%), Positives = 53/55 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQD L+GDELLSDSFPYRE+ENG+LWEVDG WVVQGA+DVDIGANPSAEGGG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGG 55

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>TCTP_FRAAN (O03992) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 170

 Score =  103 bits (258), Expect = 9e-23
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEG 247
           MLVYQD LSGDELLSDSFPY+E++NGVLWEVDG WVVQGAVDVDIGANPSAEG
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEG 53

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>TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  103 bits (257), Expect = 1e-22
 Identities = 46/55 (83%), Positives = 53/55 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQD +SGDELLSDSFPY+E+ENG++WEV+G WVV+GAVDVDIGANPSAEGGG
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGG 55

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>TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score =  103 bits (256), Expect = 2e-22
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGG 250
           M+VYQD LSGDELLSDSFPY+EL NGVLWEV+G WVVQGAVDVDIGANPSAEGG
Sbjct: 1   MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGG 54

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>TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  100 bits (250), Expect = 8e-22
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQD L+GDELLSDSF Y+E+ENG+LWEV+G WVV+GAVDVDIGANPSAEGGG
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGG 55

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>TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  100 bits (248), Expect = 1e-21
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEG 247
           MLVYQD L+GDELLSDSFPY+E+ NG+LWEV+G WVVQGAVDVDIGANPSAEG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEG 53

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>TCTP_PEA (P50906) Translationally-controlled tumor protein homolog (TCTP)|
           (23 kDa callus protein) (p23) (PsRCI22-3)
          Length = 167

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 44/54 (81%), Positives = 52/54 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGG 250
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WVV+GAVDV+IGANPSAEGG
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGG 54

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>TCTP_SOLTU (P43349) Translationally-controlled tumor protein homolog (TCTP)|
           (p23)
          Length = 168

 Score = 98.6 bits (244), Expect = 4e-21
 Identities = 45/55 (81%), Positives = 50/55 (90%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQD L+GDELLSDSFPY E++NG+LWEV G WVV GAVDV+IGANPSAEGGG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYTEIQNGMLWEVHGKWVVHGAVDVNIGANPSAEGGG 55

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>TCTP_ARATH (P31265) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 97.4 bits (241), Expect = 8e-21
 Identities = 44/55 (80%), Positives = 50/55 (90%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WV  GAVDV+IGANPSAE GG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGG 55

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>TCTP_MEDSA (P28014) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 41/54 (75%), Positives = 49/54 (90%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGG 250
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WV +G V+VDIGAN SAEGG
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAEGG 54

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>TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 45/53 (84%), Positives = 46/53 (86%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEG 247
           MLVYQD LSGDEL SDSF Y EL NGVLWEV G WVVQGAVDV+IGANPSAEG
Sbjct: 1   MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEG 53

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>TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGG 253
           MLVY D L+GDELLSDSFPY+E+ENG+LWEV+G W  +G V+V+IGANPSAE GG
Sbjct: 1   MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGG 55

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>TCTP_YEAST (P35691) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 27/54 (50%), Positives = 38/54 (70%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGG 250
           M++Y+D  S DELLSD++  + L + V++E D   V  G  ++DIGANPSAEGG
Sbjct: 1   MIIYKDIFSNDELLSDAYDAK-LVDDVIYEADCAMVNVGGDNIDIGANPSAEGG 53

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>TCTP_SCHPO (Q10344) Translationally-controlled tumor protein homolog (TCTP)|
           (p23fyp)
          Length = 168

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 27/53 (50%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVDIGANPSAE 244
           ML+Y+D +SGDEL+SD++  +E+++ +++E D   V V+   DVDIGANPSAE
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAE 52

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>TCTP_BRUMA (P90697) Translationally-controlled tumor protein homolog (TCTP)|
           (TPH-1)
          Length = 181

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEG 247
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPSAEG
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPSAEG 53

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>TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAE 244
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   D+D   IG N SAE
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAE 55

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>TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEG 247
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPS EG
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPSTEG 53

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>TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP) (Lens|
           epithelial protein)
          Length = 172

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSAEG 247
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SAEG
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEG 56

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>TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TCTP) (p23) (21|
           kDa polypeptide) (p21)
          Length = 172

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSAEG 247
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SAEG
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAEG 56

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>TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 22/55 (40%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAE 244
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   ++D   IG N SAE
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAE 55

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>TCTP_CHICK (P43347) Translationally-controlled tumor protein (TCTP) (p23)|
           (pCHK23)
          Length = 172

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEG 247
           M++Y+D +S DE+ SD +  RE+ NG+  EV+G  V +    +D   IG N SAEG
Sbjct: 1   MIIYRDCISQDEMFSDIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASAEG 56

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>TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEG 247
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAEG
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEG 56

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>TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TCTP) (p23)|
           (Histamine-releasing factor) (HRF) (Fortilin)
          Length = 172

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEG 247
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAEG
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEG 56

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>TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEG 247
           M++Y+D +S DE+ SD +  RE+  G+  EV+G  V +   ++D   IG N SAEG
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAEG 56

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>TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEG 247
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAEG
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEG 56

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>TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)|
          Length = 170

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSAE 244
           M++Y+  +SGDE+ SD+F  +E  NG+ +EVDG    +     D  I AN SAE
Sbjct: 1   MIIYKCIISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAE 54

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>TCTP_CAEEL (Q93573) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGG 250
           ML+Y+D  + DEL SDSFP + L + +++E  G  VV+   ++ + G+NPSAE G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMK-LVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEG 54

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>TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSAE 244
           M++Y+D ++ DE+ SD +   E  +G+ +EV+G  +  V+GA+ D  IG N SAE
Sbjct: 1   MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAE 55

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>TCTP_SCHJA (P91800) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 169

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVD-IGANPSAEGG 250
           M V++D +SGDE+ SDS    +L N V++EVD +++ V   +D   I ANPS E G
Sbjct: 1   MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEG 55

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>TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAE 244
           M +Y+D ++GDE+ SD++  + L + V++EV G  V +   DV I G NPSAE
Sbjct: 1   MRIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGKLVTRTHGDVQIEGFNPSAE 52

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>TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVDIGANPSAE 244
           M +Y+D ++GDE+ SD++  + L + V++EV G  V   QG + +D G NPSAE
Sbjct: 1   MRIYKDIITGDEMFSDTYKVK-LVDEVIYEVTGKLVSRTQGDIQID-GFNPSAE 52

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>TCTP_HYDAT (Q94587) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 184

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHW---VVQGAVDVDIGANPSAEG 247
           M +Y    +G E+ SD++P++  + G +W VDG +     Q   D   G N SAEG
Sbjct: 1   MYIYNCIFTGKEVFSDAYPHKLEDEGFVWVVDGKYEELADQKFDDSLFGGNKSAEG 56

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>TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSAE 244
           M++Y+D ++ DE+ SD +   E  +G+  EV+G  +   +GA+ D  IG N SAE
Sbjct: 1   MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAE 55

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>TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein homolog (TCTP)|
           (Histamine-releasing factor) (Fragment)
          Length = 166

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGG 250
           M+VY+D ++ DE+ +DS   R + +   +EVD  +    + +VD   IGANPS EGG
Sbjct: 1   MIVYKDMITEDEMFTDSHCPRVVAD-FFYEVDSRFTTVSS-NVDGRLIGANPSGEGG 55

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>TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)|
          Length = 169

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ-GAVDVD-IGANPSAE 244
           M++Y+D +SGDE+ SD++  + L++   +E++G    + G +D   IG N SAE
Sbjct: 1   MIIYKDIVSGDEMFSDAYKMKVLDD-YFYELEGKITTEKGGIDESAIGGNASAE 53

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>TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 36.2 bits (82), Expect = 0.023
 Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAE 244
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SAE
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDDVIYEVYGKLITRQGDDIKLEGANASAE 52

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>TCTP_LUMRU (O18477) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSAEGG 250
           M++++D   G EL SDSFP   L N  +++V G          D  IG N SAEGG
Sbjct: 1   MIIFKDVFPGVELFSDSFPV-SLVNETVYKVKGKLRTDTFAIDDKAIGGNASAEGG 55

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>TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAE 244
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SAE
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDEVIYEVYGKLITRQGDDIKLEGANASAE 52

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>FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2|
          Length = 173

 Score = 33.5 bits (75), Expect = 0.15
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAE 244
           M+++QD +S +E+ SD +   E+ NG+  EV+   + +   + D   IG N S+E
Sbjct: 1   MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSE 55

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>YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I|
          Length = 670

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +3

Query: 48  FSLFSGEKSQEAASCSCTRTSFPAMNSCRIPSRTGSWRTVCSGKSMAIGSF 200
           +++ + E  ++  SCSCT      ++ C  P+ + +W T+   K+  I  F
Sbjct: 82  YAVDNEEVKKDVISCSCTIYPLVFLHCCTSPNDSSTWDTLTKLKNEIINDF 132

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>MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein kinase|
           precursor (EC 2.7.10.1) (Muscle-specific tyrosine
           protein kinase receptor) (Muscle-specific kinase
           receptor) (MuSK)
          Length = 947

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 239 QRGWHQCPHQLLLERPNGHRLPRAHRSPAPCT 144
           QRG ++ P  +LL  P  +RLP  H+ P+ CT
Sbjct: 419 QRGIYK-PGLMLLALPECNRLPSLHQDPSACT 449

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>STP2_MACFA (Q8WNV1) Nuclear transition protein 2 (TP-2) (TP2)|
          Length = 141

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
 Frame = -3

Query: 245 PQQRGWHQCPHQLLLERPNGHRLPRAHRS----PAPCTGRNPTGVHRRKAC 105
           PQ R    C H       +  +  R  RS     +P T +NPTG H    C
Sbjct: 21  PQSRSQCTCTHHCQTFSQSCRQSQRGSRSRSSSQSPATHQNPTGAHSSSGC 71

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>ANA_DROME (Q26307) Protein anachronism precursor|
          Length = 474

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -3

Query: 251 HHPQQRGWHQCPHQLLLERPNGHRLPRAHRSPA 153
           HH  + G H   HQL     + HR  + HR PA
Sbjct: 438 HHRHRTGHHHPHHQLHQHHHHHHRHTKHHRIPA 470

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>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20) (X16 protein)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 783

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -1

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI  EF+ G LV
Sbjct: 712 HQSVFMNEPRLSDFK-----QVLLREGIHAEFVGGVLV 744


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,128,898
Number of Sequences: 219361
Number of extensions: 688788
Number of successful extensions: 2257
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result