| Clone Name | baet01g04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF230786.1|AF230786 Hordeum vulgare human tumor protein-like protein mRNA, complete cds Length = 778 Score = 450 bits (227), Expect = e-123 Identities = 241/243 (99%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 13 gccgctact-cccctgctcg-cctccgctctttagggttttctcttttttcgggggagaa 70 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gccgctacttcccctgctcggcctccgctctttagggttttctcttttttcgggggagaa 60 Query: 71 atctcaagaggcggcatcatgctcgtgtaccaggacaagctttccggcgatgaactcctg 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atctcaagaggcggcatcatgctcgtgtaccaggacaagctttccggcgatgaactcctg 120 Query: 131 tcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgatggccat 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgatggccat 180 Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 240 Query: 251 ggt 253 ||| Sbjct: 241 ggt 243
>gb|AF508970.1| Triticum aestivum translationally controlled tumor protein mRNA, complete cds Length = 779 Score = 321 bits (162), Expect = 6e-85 Identities = 189/198 (95%) Strand = Plus / Plus Query: 56 tttttcgggggagaaatctcaagaggcggcatcatgctcgtgtaccaggacaagctttcc 115 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4 tttttcgggggagaaatctcaagaggcggcaccatgctcgtgtaccaggacaagctttcc 63 Query: 116 ggcgatgaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgg 175 ||||| || || ||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 64 ggcgacgagcttctgtcggattcgttcccgtacagggagctggagaacggcgtgctctgg 123 Query: 176 gaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccc 235 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 124 gaagtcgacggccattgggtcgttcaaggagcagttgatgtggacattggagccaatccc 183 Query: 236 tctgctgagggtggtggt 253 |||||||||||||||||| Sbjct: 184 tctgctgagggtggtggt 201
>dbj|AK105453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C05, full insert sequence Length = 970 Score = 167 bits (84), Expect = 2e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 62 gggggagaaatctcaagaggcggcatcatgctcgtgtaccaggacaagctttccggcgat 121 |||||||| || | ||||||||||| |||| | || |||||||| |||| |||| || Sbjct: 86 gggggagagatttgaagaggcggcaccatgttggtctaccaggatctgcttaccggtgac 145 Query: 122 gaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtc 181 || |||||||||||||| ||||| ||||| ||| | |||||||| | |||||||||||| Sbjct: 146 gagctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtc 205 Query: 182 gatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgct 241 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 206 gatggcaagtgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgct 265 Query: 242 gagggtggtggt 253 |||||||||||| Sbjct: 266 gagggtggtggt 277
>dbj|D12626.1|RIC21KDP Oryza sativa (japonica cultivar-group) mRNA for 21kd polypeptide, complete cds Length = 786 Score = 167 bits (84), Expect = 2e-38 Identities = 165/192 (85%) Strand = Plus / Plus Query: 62 gggggagaaatctcaagaggcggcatcatgctcgtgtaccaggacaagctttccggcgat 121 |||||||| || | ||||||||||| |||| | || |||||||| |||| |||| || Sbjct: 51 gggggagagatttgaagaggcggcaccatgttggtctaccaggatctgcttaccggtgac 110 Query: 122 gaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtc 181 || |||||||||||||| ||||| ||||| ||| | |||||||| | |||||||||||| Sbjct: 111 gagctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtc 170 Query: 182 gatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgct 241 |||||| | ||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 171 gatggcaagtgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgct 230 Query: 242 gagggtggtggt 253 |||||||||||| Sbjct: 231 gagggtggtggt 242
>dbj|D10966.1|RICNH7521 Oryza sativa mRNA for 21kd polypeptide Length = 357 Score = 153 bits (77), Expect = 3e-34 Identities = 163/192 (84%) Strand = Plus / Plus Query: 62 gggggagaaatctcaagaggcggcatcatgctcgtgtaccaggacaagctttccggcgat 121 |||||||| || | ||||| ||||| |||| | || |||||||| |||| |||| || Sbjct: 51 gggggagagatttgaagagacggcaccatgttagtctaccaggatctgcttaccggtgac 110 Query: 122 gaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtc 181 ||||||||||||||||| ||||| ||||| ||| | |||||| | | |||||||||||| Sbjct: 111 gaactcctgtcggattcgttcccctacagagagatcgagaacagcatcctctgggaagtc 170 Query: 182 gatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgct 241 |||||| | ||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 171 gatggcaagtgggtcgttcaaggagctattgatgtggacattggtnccaacccatctgct 230 Query: 242 gagggtggtggt 253 |||||||||||| Sbjct: 231 gagggtggtggt 242
>gb|AC108870.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0682E05, complete sequence Length = 162223 Score = 101 bits (51), Expect = 1e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133734 tgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgctgagggtggt 133675 Query: 251 ggt 253 ||| Sbjct: 133674 ggt 133672 Score = 61.9 bits (31), Expect = 9e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 ctcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgat 184 |||||||||||||| ||||| ||||| ||| | |||||||| | ||||||||||||||| Sbjct: 134490 ctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtcgat 134431 Query: 185 ggc 187 ||| Sbjct: 134430 ggc 134428
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 101 bits (51), Expect = 1e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 25643687 tgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgctgagggtggt 25643628 Query: 251 ggt 253 ||| Sbjct: 25643627 ggt 25643625 Score = 61.9 bits (31), Expect = 9e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 ctcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgat 184 |||||||||||||| ||||| ||||| ||| | |||||||| | ||||||||||||||| Sbjct: 25644443 ctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtcgat 25644384 Query: 185 ggc 187 ||| Sbjct: 25644383 ggc 25644381
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 101 bits (51), Expect = 1e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 25962357 tgggtcgttcaaggagctattgatgtggacattggtgccaacccatctgctgagggtggt 25962298 Query: 251 ggt 253 ||| Sbjct: 25962297 ggt 25962295 Score = 61.9 bits (31), Expect = 9e-07 Identities = 55/63 (87%) Strand = Plus / Minus Query: 125 ctcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgat 184 |||||||||||||| ||||| ||||| ||| | |||||||| | ||||||||||||||| Sbjct: 25963113 ctcctgtcggattcgttcccctacagagagatcgagaacggcatcctctgggaagtcgat 25963054 Query: 185 ggc 187 ||| Sbjct: 25963053 ggc 25963051
>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence Length = 125129 Score = 79.8 bits (40), Expect = 4e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 190 ttgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 |||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||| Sbjct: 3364 ttgggttgttcaaggagcagtggatgtgaacattggtgctaacccttctgctgagggtgg 3423
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence Length = 110437 Score = 79.8 bits (40), Expect = 4e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 190 ttgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 |||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||| Sbjct: 22901 ttgggttgttcaaggagcagtggatgtgaacattggtgctaacccttctgctgagggtgg 22842 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||||||||| |||||| | |||||||| ||||| |||||||||||||| Sbjct: 43482 tgggttgttcaaggagcagtagatgtgaatattggtgctaacccttctgctgagggtgg 43424 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||||||||| |||||| | |||||||| ||||| |||||||||||||| Sbjct: 29429 tgggttgttcaaggagcagtagatgtgaatattggtgctaacccttctgctgagggtgg 29371
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence Length = 129197 Score = 79.8 bits (40), Expect = 4e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 190 ttgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 |||||| |||||||||||||| |||||| |||||||||| ||||| |||||||||||||| Sbjct: 33160 ttgggttgttcaaggagcagtggatgtgaacattggtgctaacccttctgctgagggtgg 33101 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||||||||| |||||| | |||||||| ||||| |||||||||||||| Sbjct: 53741 tgggttgttcaaggagcagtagatgtgaatattggtgctaacccttctgctgagggtgg 53683 Score = 69.9 bits (35), Expect = 4e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||||||||| |||||| | |||||||| ||||| |||||||||||||| Sbjct: 39688 tgggttgttcaaggagcagtagatgtgaatattggtgctaacccttctgctgagggtgg 39630
>gb|AF421558.1| Glycine max translationally controlled tumor-like protein mRNA, complete cds Length = 884 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| ||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 162 tgggttgttaaaggagcagttgatgtagacattggtgcaaacccttctgctgagggtgg 220
>emb|AJ012484.1|PME012484 Pseudotsuga menziesii mRNA for TCTP-like protein Length = 921 Score = 77.8 bits (39), Expect = 2e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| || ||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 267 tgggttgtccaaggagcagttgatgttgacattggtgccaacccatctgccgagggtgg 325
>gb|DQ304537.1| Cucurbita maxima translationally controlled tumor protein mRNA, complete cds Length = 892 Score = 77.8 bits (39), Expect = 2e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 131 tcggattccttcccgtacagggagctggagaacggtgtgctctgggaagtcgatggccat 190 |||||||| ||||| |||| ||| || ||||| || || |||||||||| || || | Sbjct: 160 tcggattcgttcccatacaaggaactcgagaatggaatgatctgggaagttgagggaaag 219 Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 ||||||||||||||||| || ||||||||||||||||| || || |||||||| |||| | Sbjct: 220 tgggtcgttcaaggagcggtcgatgtggacattggtgcaaatccttctgctgaaggtgat 279 Query: 251 ggt 253 ||| Sbjct: 280 ggt 282
>gb|BT017017.1| Zea mays clone EK07D2312A12.c mRNA sequence Length = 788 Score = 71.9 bits (36), Expect = 9e-10 Identities = 111/136 (81%) Strand = Plus / Plus Query: 116 ggcgatgaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgg 175 ||||| || |||||||||||||| ||| | |||| |||||| |||||||| || || ||| Sbjct: 96 ggcgacgagctcctgtcggattcattcacctacaaggagctcgagaacggcgtcctgtgg 155 Query: 176 gaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccc 235 || ||||| || | |||||| ||||| | ||||||||||||||||||||||| || Sbjct: 156 gaggtcgagggaaagtgggtcacccaaggtcctgttgatgtggacattggtgccaatcca 215 Query: 236 tctgctgagggtggtg 251 || || |||||||||| Sbjct: 216 tccgccgagggtggtg 231
>gb|BT016182.1| Zea mays clone Contig15 mRNA sequence Length = 828 Score = 71.9 bits (36), Expect = 9e-10 Identities = 111/136 (81%) Strand = Plus / Plus Query: 116 ggcgatgaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgg 175 ||||| || |||||||||||||| ||| | |||| |||||| |||||||| || || ||| Sbjct: 124 ggcgacgagctcctgtcggattcattcacctacaaggagctcgagaacggcgtcctgtgg 183 Query: 176 gaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccc 235 || ||||| || | |||||| ||||| | ||||||||||||||||||||||| || Sbjct: 184 gaggtcgagggaaagtgggtcacccaaggtcctgttgatgtggacattggtgccaatcca 243 Query: 236 tctgctgagggtggtg 251 || || |||||||||| Sbjct: 244 tccgccgagggtggtg 259
>emb|Z86091.1|FXATCTP Fragaria x ananassa mRNA for TCTP protein Length = 815 Score = 71.9 bits (36), Expect = 9e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 173 tgggaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaac 232 |||||||| ||||| | ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 236 tgggaagttgatggaaagtgggttgttcaaggagcagttgatgtagacattggtgcaaat 295 Query: 233 ccctctgctgagggtg 248 || |||||||| |||| Sbjct: 296 ccttctgctgaaggtg 311
>gb|AY103653.1| Zea mays PCO087824 mRNA sequence Length = 846 Score = 71.9 bits (36), Expect = 9e-10 Identities = 111/136 (81%) Strand = Plus / Plus Query: 116 ggcgatgaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgg 175 ||||| || |||||||||||||| ||| | |||| |||||| |||||||| || || ||| Sbjct: 99 ggcgacgagctcctgtcggattcattcacctacaaggagctcgagaacggcgtcctgtgg 158 Query: 176 gaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccc 235 || ||||| || | |||||| ||||| | ||||||||||||||||||||||| || Sbjct: 159 gaggtcgagggaaagtgggtcacccaaggtcctgttgatgtggacattggtgccaatcca 218 Query: 236 tctgctgagggtggtg 251 || || |||||||||| Sbjct: 219 tccgccgagggtggtg 234
>gb|AF548024.1| Zea mays translationally controlled tumor protein-like protein (TCTP) mRNA, complete cds Length = 504 Score = 63.9 bits (32), Expect = 2e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 116 ggcgatgaactcctgtcggattccttcccgtacagggagctggagaacggtgtgctctgg 175 ||||| || |||||||||||||| ||| | |||| |||||| |||||||| || || ||| Sbjct: 28 ggcgacgagctcctgtcggattcattcacctacaaggagctcgagaacggcgtcctgtgg 87 Query: 176 gaagtcgatggccattgggtcgttcaaggagcagttgatgtggacattggtgccaacccc 235 || ||||| || | |||||| ||||| | |||||||| |||||||||||||| || Sbjct: 88 gaggtcgagggaaagtgggtcacccaaggtcctgttgatgtagacattggtgccaatcca 147 Query: 236 tctgctgagggtggtg 251 || || |||||||||| Sbjct: 148 tccgccgagggtggtg 163
>gb|AF230211.1|AF230211 Cucumis melo translationally controlled tumor protein-related protein mRNA, complete cds Length = 824 Score = 61.9 bits (31), Expect = 9e-07 Identities = 52/59 (88%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||||||| ||||||||||||||||||| |||||||| || || || ||||| ||||| Sbjct: 169 tgggtcgttaaaggagcagttgatgtggatattggtgctaatccttcagctgaaggtgg 227
>gb|AF091455.1|AF091455 Hevea brasiliensis translationally controlled tumor protein (TCTP) mRNA, complete cds Length = 837 Score = 52.0 bits (26), Expect = 9e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtg 248 ||||| |||||||| || |||||||| ||||||||||| || || |||||||| |||| Sbjct: 171 tgggttgttcaaggggctgttgatgtagacattggtgcaaatccttctgctgaaggtg 228
>gb|DQ323740.1| Hevea brasiliensis translationally controlled tumor protein (TCTP) mRNA, complete cds Length = 670 Score = 52.0 bits (26), Expect = 9e-04 Identities = 50/58 (86%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtg 248 ||||| |||||||| || |||||||| ||||||||||| || || |||||||| |||| Sbjct: 171 tgggttgttcaaggggctgttgatgtagacattggtgcaaatccttctgctgaaggtg 228
>gb|DQ306731.1| Hevea brasiliensis isolate SSH2 mRNA sequence Length = 520 Score = 52.0 bits (26), Expect = 9e-04 Identities = 50/58 (86%) Strand = Plus / Minus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtg 248 ||||| |||||||| || |||||||| ||||||||||| || || |||||||| |||| Sbjct: 370 tgggttgttcaaggggctgttgatgtagacattggtgcaaatccttctgctgaaggtg 313
>gb|AY323927.1| Elaeis guineensis translationally controlled tumor protein (TCTP) mRNA, complete cds Length = 507 Score = 50.1 bits (25), Expect = 0.003 Identities = 52/61 (85%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtggt 250 |||||| ||||||||||||| |||| ||||||||||| ||||| || || || |||||| Sbjct: 103 tgggtcattcaaggagcagtaaatgtcgacattggtgcaaacccttccgccgaaggtggt 162 Query: 251 g 251 | Sbjct: 163 g 163
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Plus Query: 156 tggagaacggtgtgctctgggaag 179 |||||||||||||||||||||||| Sbjct: 1921833 tggagaacggtgtgctctgggaag 1921856 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 ggtgccaacccctctgctgagggtg 248 |||||||||||||| |||||||||| Sbjct: 2669685 ggtgccaacccctccgctgagggtg 2669709
>gb|DQ235166.1| Solanum tuberosum clone 153H07 P23 tumor protein-like mRNA, complete cds Length = 834 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 174 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 232
>gb|DQ207879.1| Solanum tuberosum clone 096G01 P23 tumor protein-like mRNA, complete cds Length = 794 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 182 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 240
>gb|DQ191671.1| Solanum tuberosum P23-like protein mRNA, complete cds Length = 819 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 203 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 261
>gb|DQ191649.1| Solanum tuberosum P23 tumor protein-like protein mRNA, complete cds Length = 784 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 171 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 229
>gb|DQ191623.1| Solanum tuberosum P23 tumor protein-like protein mRNA, complete cds Length = 787 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 174 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 232
>emb|Z69944.1|SPAC1F12 S.pombe chromosome I cosmid c1F12 Length = 14399 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Minus Query: 211 tgatgtggacattggtgccaacccctctgctgagg 245 |||||| ||||||||||||||||| ||||| |||| Sbjct: 2284 tgatgttgacattggtgccaacccttctgccgagg 2250
>ref|NM_001019749.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1F12.02c), partial mRNA Length = 507 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Plus Query: 211 tgatgtggacattggtgccaacccctctgctgagg 245 |||||| ||||||||||||||||| ||||| |||| Sbjct: 123 tgatgttgacattggtgccaacccttctgccgagg 157
>gb|U97399.1|SPU97399 Schizosaccharomyces pombe unknown protein mRNA, partial cds Length = 1095 Score = 46.1 bits (23), Expect = 0.053 Identities = 32/35 (91%) Strand = Plus / Plus Query: 211 tgatgtggacattggtgccaacccctctgctgagg 245 |||||| ||||||||||||||||| ||||| |||| Sbjct: 858 tgatgttgacattggtgccaacccttctgccgagg 892
>gb|L47968.1|PEACPP23 Pisum sativum (clone PsRCI22-3) callus protein P23 mRNA, complete cds Length = 700 Score = 46.1 bits (23), Expect = 0.053 Identities = 41/47 (87%) Strand = Plus / Plus Query: 203 ggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||||||||||||| |||| ||||| ||||| ||||| || ||||| Sbjct: 185 ggagcagttgatgtgaacatcggtgcaaacccttctgccgaaggtgg 231
>gb|DQ241847.1| Solanum tuberosum clone 186H01 P23 tumor protein-like mRNA, complete cds Length = 795 Score = 46.1 bits (23), Expect = 0.053 Identities = 50/59 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggtgg 249 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||||| Sbjct: 163 tgggttgttcaaggtgccgttgatgtaaacattggggcaaatccttctgctgagggtgg 221
>gb|AY488171.1| Capsicum annuum P23 tumor protein-like protein mRNA, complete cds Length = 615 Score = 42.1 bits (21), Expect = 0.83 Identities = 48/57 (84%) Strand = Plus / Plus Query: 191 tgggtcgttcaaggagcagttgatgtggacattggtgccaacccctctgctgagggt 247 ||||| |||||||| || |||||||| ||||||| || || || |||||||||||| Sbjct: 131 tgggttgttcaaggtgctgttgatgtaaacattggggcaaatccttctgctgagggt 187
>dbj|AB226162.1| Aspergillus oryzae cDNA, contig sequence: AoEST3020 Length = 985 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 ggtgccaacccctctgctgagggtg 248 |||||||||||||| |||||||||| Sbjct: 221 ggtgccaacccctccgctgagggtg 245
>gb|AF418663.1|AF418663 Brassica oleracea translationally controlled tumor protein (TCTP) mRNA, complete cds Length = 823 Score = 42.1 bits (21), Expect = 0.83 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 acattggtgccaacccctctgctga 243 |||||||||||||||| |||||||| Sbjct: 216 acattggtgccaacccatctgctga 240
>ref|NM_124857.2| Arabidopsis thaliana translation initiation factor AT5G54760 mRNA, complete cds Length = 706 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttagggttttctctttttt 60 |||||||||||||||||||| Sbjct: 32 tttagggttttctctttttt 51
>gb|AY191612.1| Pan troglodytes Rho-associated protein kinase (ROCK1) gene, partial cds; ubiquitin specific protease 14 (USP14) gene, complete cds; and THO complex 1 (THOC1) gene, partial cds Length = 186959 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttagggttttctctttttt 60 |||||||||||||||||||| Sbjct: 148159 tttagggttttctctttttt 148178
>gb|AC111127.11| Mus musculus chromosome 9, clone RP23-338I1, complete sequence Length = 186127 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 ttagggttttctcttttttc 61 |||||||||||||||||||| Sbjct: 100324 ttagggttttctcttttttc 100343
>gb|AC183297.3| Pan troglodytes BAC clone CH251-300E12 from chromosome 18, complete sequence Length = 173095 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttagggttttctctttttt 60 |||||||||||||||||||| Sbjct: 83071 tttagggttttctctttttt 83090
>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence Length = 163065 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gctctttagggttttctctt 56 |||||||||||||||||||| Sbjct: 12874 gctctttagggttttctctt 12855
>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence Length = 169462 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gctctttagggttttctctt 56 |||||||||||||||||||| Sbjct: 95182 gctctttagggttttctctt 95163
>dbj|AB005232.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBG8 Length = 80315 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttagggttttctctttttt 60 |||||||||||||||||||| Sbjct: 2920 tttagggttttctctttttt 2939
>gb|L42813.1|PRRMTCG Protopterus dolloi complete mitochondrial genome Length = 16646 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 tcttttttcgggggagaaat 72 |||||||||||||||||||| Sbjct: 16043 tcttttttcgggggagaaat 16062
>dbj|AP000845.4| Homo sapiens genomic DNA, chromosome 18p clone:RP11-705O1, complete sequences Length = 142000 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 tttagggttttctctttttt 60 |||||||||||||||||||| Sbjct: 33020 tttagggttttctctttttt 33039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,090,479 Number of Sequences: 3902068 Number of extensions: 2090479 Number of successful extensions: 45951 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45841 Number of HSP's gapped (non-prelim): 106 length of query: 253 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 231 effective length of database: 17,147,199,772 effective search space: 3961003147332 effective search space used: 3961003147332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)