Clone Information

BLAST Search Result

Clone Name	baet01g01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein hom...	126	2e-29
2	TCTP_ORYSA (P35681) Translationally-controlled tumor protein hom...	116	2e-26
3	TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein hom...	112	3e-25
4	TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein hom...	109	2e-24
5	TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein hom...	108	5e-24
6	TCTP_SOLTU (P43349) Translationally-controlled tumor protein hom...	107	1e-23
7	TCTP_ARATH (P31265) Translationally-controlled tumor protein hom...	105	2e-23
8	TCTP_FRAAN (O03992) Translationally-controlled tumor protein hom...	105	3e-23
9	TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein hom...	105	3e-23
10	TCTP_PEA (P50906) Translationally-controlled tumor protein homol...	102	2e-22
11	TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein hom...	100	1e-21
12	TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein hom...	100	1e-21
13	TCTP_MEDSA (P28014) Translationally-controlled tumor protein hom...	97	1e-20
14	TCTP_BRUMA (P90697) Translationally-controlled tumor protein hom...	56	3e-08
15	TCTP_YEAST (P35691) Translationally-controlled tumor protein hom...	55	5e-08
16	TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein hom...	54	8e-08
17	TCTP_SCHPO (Q10344) Translationally-controlled tumor protein hom...	53	2e-07
18	TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)	51	9e-07
19	TCTP_CAEEL (Q93573) Translationally-controlled tumor protein hom...	49	3e-06
20	TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)	49	3e-06
21	TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP...	48	6e-06
22	TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TC...	48	6e-06
23	TCTP_CHICK (P43347) Translationally-controlled tumor protein (TC...	47	1e-05
24	TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)	46	3e-05
25	TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TC...	46	3e-05
26	TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)	45	4e-05
27	TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)	45	4e-05
28	TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)	44	1e-04
29	TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)	43	2e-04
30	TCTP_SCHJA (P91800) Translationally-controlled tumor protein hom...	42	4e-04
31	TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein hom...	40	0.001
32	TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein hom...	40	0.001
33	TCTP_HYDAT (Q94587) Translationally-controlled tumor protein hom...	39	0.003
34	TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)	39	0.005
35	TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein hom...	38	0.006
36	TCTP_LUMRU (O18477) Translationally-controlled tumor protein hom...	37	0.013
37	TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein hom...	37	0.013
38	TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein hom...	37	0.017
39	TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)	37	0.017
40	FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2	34	0.086
41	YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I	30	1.6
42	MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein k...	29	3.6
43	SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.1
44	SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.1
45	CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity fa...	28	6.1
46	CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity fa...	28	6.1
47	CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity fa...	28	6.1
48	CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity fa...	28	8.0

>TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP)|
           (HTP)
          Length = 168

 Score =  126 bits (316), Expect = 2e-29
 Identities = 59/59 (100%), Positives = 59/59 (100%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 59

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>TCTP_ORYSA (P35681) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  116 bits (290), Expect = 2e-26
 Identities = 52/59 (88%), Positives = 57/59 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDSFPYRE+ENG+LWEVDG WVVQGA+DVDIGANPSAEGGG+DEG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEG 59

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>TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  112 bits (279), Expect = 3e-25
 Identities = 50/59 (84%), Positives = 57/59 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD +SGDELLSDSFPY+E+ENG++WEV+G WVV+GAVDVDIGANPSAEGGGEDEG
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEG 59

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>TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  109 bits (272), Expect = 2e-24
 Identities = 50/59 (84%), Positives = 56/59 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDSF Y+E+ENG+LWEV+G WVV+GAVDVDIGANPSAEGGGEDEG
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEG 59

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>TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  108 bits (269), Expect = 5e-24
 Identities = 49/59 (83%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDSFPY+E+ NG+LWEV+G WVVQGAVDVDIGANPSAEG  EDEG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEG 59

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>TCTP_SOLTU (P43349) Translationally-controlled tumor protein homolog (TCTP)|
           (p23)
          Length = 168

 Score =  107 bits (266), Expect = 1e-23
 Identities = 49/59 (83%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDSFPY E++NG+LWEV G WVV GAVDV+IGANPSAEGGGEDEG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYTEIQNGMLWEVHGKWVVHGAVDVNIGANPSAEGGGEDEG 59

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>TCTP_ARATH (P31265) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  105 bits (263), Expect = 2e-23
 Identities = 48/59 (81%), Positives = 54/59 (91%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WV  GAVDV+IGANPSAE GGEDEG
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEG 59

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>TCTP_FRAAN (O03992) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 170

 Score =  105 bits (262), Expect = 3e-23
 Identities = 49/57 (85%), Positives = 52/57 (91%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGED 259
           MLVYQD LSGDELLSDSFPY+E++NGVLWEVDG WVVQGAVDVDIGANPSAEG   D
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSAEGADAD 57

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>TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score =  105 bits (262), Expect = 3e-23
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGED 259
           M+VYQD LSGDELLSDSFPY+EL NGVLWEV+G WVVQGAVDVDIGANPSAEGG E+
Sbjct: 1   MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEE 57

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>TCTP_PEA (P50906) Translationally-controlled tumor protein homolog (TCTP)|
           (23 kDa callus protein) (p23) (PsRCI22-3)
          Length = 167

 Score =  102 bits (255), Expect = 2e-22
 Identities = 48/59 (81%), Positives = 56/59 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WVV+GAVDV+IGANPSAE GGEDEG
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAE-GGEDEG 58

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>TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  100 bits (248), Expect = 1e-21
 Identities = 49/59 (83%), Positives = 50/59 (84%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD LSGDEL SDSF Y EL NGVLWEV G WVVQGAVDV+IGANPSAEG  EDEG
Sbjct: 1   MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEG 59

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>TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  100 bits (248), Expect = 1e-21
 Identities = 44/59 (74%), Positives = 52/59 (88%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVY D L+GDELLSDSFPY+E+ENG+LWEV+G W  +G V+V+IGANPSAE GGEDEG
Sbjct: 1   MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEG 59

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>TCTP_MEDSA (P28014) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 97.1 bits (240), Expect = 1e-20
 Identities = 45/59 (76%), Positives = 53/59 (89%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEG 265
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WV +G V+VDIGAN SAE GGEDEG
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAE-GGEDEG 58

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>TCTP_BRUMA (P90697) Translationally-controlled tumor protein homolog (TCTP)|
           (TPH-1)
          Length = 181

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGEDEG 265
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPSAEG   DEG
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPSAEGEDGDEG 59

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>TCTP_YEAST (P35691) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 28/57 (49%), Positives = 40/57 (70%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGED 259
           M++Y+D  S DELLSD++  + L + V++E D   V  G  ++DIGANPSAEGG +D
Sbjct: 1   MIIYKDIFSNDELLSDAYDAK-LVDDVIYEADCAMVNVGGDNIDIGANPSAEGGDDD 56

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>TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGEDEG 265
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPS EG   DEG
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPSTEGEDGDEG 59

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>TCTP_SCHPO (Q10344) Translationally-controlled tumor protein homolog (TCTP)|
           (p23fyp)
          Length = 168

 Score = 52.8 bits (125), Expect = 2e-07
 Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVDIGANPSAEGGGED 259
           ML+Y+D +SGDEL+SD++  +E+++ +++E D   V V+   DVDIGANPSAE   E+
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSAEDAEEN 57

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>TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGE 256
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   D+D   IG N SAE   E
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADE 59

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>TCTP_CAEEL (Q93573) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGEDEG 265
           ML+Y+D  + DEL SDSFP + L + +++E  G  VV+   ++ + G+NPSAE G ED+G
Sbjct: 1   MLIYKDIFTDDELSSDSFPMK-LVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDG 59

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>TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   ++D   IG N SAE   +D
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAE--VQD 58

Query: 260 EG 265
           EG
Sbjct: 59  EG 60

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>TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP) (Lens|
           epithelial protein)
          Length = 172

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSAEGGGED 259
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TCTP) (p23) (21|
           kDa polypeptide) (p21)
          Length = 172

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSAEGGGED 259
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_CHICK (P43347) Translationally-controlled tumor protein (TCTP) (p23)|
           (pCHK23)
          Length = 172

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D +S DE+ SD +  RE+ NG+  EV+G  V +    +D   IG N SAE G E 
Sbjct: 1   MIIYRDCISQDEMFSDIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TCTP) (p23)|
           (Histamine-releasing factor) (HRF) (Fortilin)
          Length = 172

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D +S DE+ SD +  RE+  G+  EV+G  V +   ++D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SAE G E 
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAE-GPEG 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSAEGGGED 259
           M++Y+D ++ DE+ SD +   E  +G+ +EV+G  +  V+GA+ D  IG N SAE   ED
Sbjct: 1   MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASAECQEED 60

Query: 260 EG 265
            G
Sbjct: 61  IG 62

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>TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)|
          Length = 170

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSAE 244
           M++Y+  +SGDE+ SD+F  +E  NG+ +EVDG    +     D  I AN SAE
Sbjct: 1   MIIYKCIISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASAE 54

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>TCTP_SCHJA (P91800) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 169

 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVD-IGANPSAEGGGED 259
           M V++D +SGDE+ SDS    +L N V++EVD +++ V   +D   I ANPS E G E+
Sbjct: 1   MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEE 58

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>TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGE 256
           M +Y+D ++GDE+ SD++  + L + V++EV G  V +   DV I G NPSAE   E
Sbjct: 1   MRIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGKLVTRTHGDVQIEGFNPSAEEADE 56

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>TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVDIGANPSAEGGGE 256
           M +Y+D ++GDE+ SD++  + L + V++EV G  V   QG + +D G NPSAE   E
Sbjct: 1   MRIYKDIITGDEMFSDTYKVK-LVDEVIYEVTGKLVSRTQGDIQID-GFNPSAEEADE 56

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>TCTP_HYDAT (Q94587) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 184

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHW---VVQGAVDVDIGANPSAEGGGED 259
           M +Y    +G E+ SD++P++  + G +W VDG +     Q   D   G N SAE G +D
Sbjct: 1   MYIYNCIFTGKEVFSDAYPHKLEDEGFVWVVDGKYEELADQKFDDSLFGGNKSAE-GEDD 59

Query: 260 EG 265
           EG
Sbjct: 60  EG 61

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>TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSAEGGGED 259
           M++Y+D ++ DE+ SD +   E  +G+  EV+G  +   +GA+ D  IG N SAE   +D
Sbjct: 1   MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASAEFQEDD 60

Query: 260 EG 265
            G
Sbjct: 61  VG 62

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>TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein homolog (TCTP)|
           (Histamine-releasing factor) (Fragment)
          Length = 166

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M+VY+D ++ DE+ +DS   R + +   +EVD  +    + +VD   IGANPS E GGED
Sbjct: 1   MIVYKDMITEDEMFTDSHCPRVVAD-FFYEVDSRFTTVSS-NVDGRLIGANPSGE-GGED 57

Query: 260 E 262
           E
Sbjct: 58  E 58

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>TCTP_LUMRU (O18477) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSAEGGGE 256
           M++++D   G EL SDSFP   L N  +++V G          D  IG N SAEGG E
Sbjct: 1   MIIFKDVFPGVELFSDSFPV-SLVNETVYKVKGKLRTDTFAIDDKAIGGNASAEGGEE 57

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>TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGE 256
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SAE   E
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDDVIYEVYGKLITRQGDDIKLEGANASAEEADE 56

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>TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSAEGGGE 256
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SAE   E
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDEVIYEVYGKLITRQGDDIKLEGANASAEEADE 56

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>TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)|
          Length = 169

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ-GAVDVD-IGANPSAEGGGE 256
           M++Y+D +SGDE+ SD++  + L++   +E++G    + G +D   IG N SAE   E
Sbjct: 1   MIIYKDIVSGDEMFSDAYKMKVLDD-YFYELEGKITTEKGGIDESAIGGNASAEDAVE 57

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>FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2|
          Length = 173

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSAEGGGED 259
           M+++QD +S +E+ SD +   E+ NG+  EV+   + +   + D   IG N S+E   ED
Sbjct: 1   MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSE-STED 59

Query: 260 E 262
           E
Sbjct: 60  E 60

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>YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I|
          Length = 670

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +3

Query: 48  FSLFSGEKSQEAASCSCTRTSFPAMNSCRIPSRTGSWRTVCSGKSMAIGSF 200
           +++ + E  ++  SCSCT      ++ C  P+ + +W T+   K+  I  F
Sbjct: 82  YAVDNEEVKKDVISCSCTIYPLVFLHCCTSPNDSSTWDTLTKLKNEIINDF 132

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>MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein kinase|
           precursor (EC 2.7.10.1) (Muscle-specific tyrosine
           protein kinase receptor) (Muscle-specific kinase
           receptor) (MuSK)
          Length = 947

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 239 QRGWHQCPHQLLLERPNGHRLPRAHRSPAPCT 144
           QRG ++ P  +LL  P  +RLP  H+ P+ CT
Sbjct: 419 QRGIYK-PGLMLLALPECNRLPSLHQDPSACT 449

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>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20) (X16 protein)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 783

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -2

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI  EF+ G LV
Sbjct: 712 HQSVFMNEPRLSDFK-----QVLLREGIHAEFVGGVLV 744


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,835,117
Number of Sequences: 219361
Number of extensions: 670768
Number of successful extensions: 2227
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 2171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2219
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result