ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet01f07 |
|---|---|
| Clone Library Name | barley_pub |
>AVT1_YEAST (P47082) Vacuolar amino acid transporter 1| Length = 602 Score = 39.7 bits (91), Expect = 0.005 Identities = 21/60 (35%), Positives = 30/60 (50%) Frame = +2 Query: 317 ITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADCYRTGDPLTGERNYTY 496 I +IG G+L+L GWV+G L +FA T+ T+ LL+ C T L + Y Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGY 277
>S36A1_HUMAN (Q7Z2H8) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) Length = 476 Score = 38.9 bits (89), Expect = 0.009 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +2 Query: 275 QRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 451 Q + T + H++ IG+G+L L A G V+GP++L++ + + G+L C Sbjct: 43 QSNSTTWFQTLIHLLKGNIGTGLLGLPLAVKNAGIVMGPISLLIIGIVAVHCMGILVKC 101
>S36A1_RAT (Q924A5) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) (Lysosomal amino acid transporter 1) (LYAAT-1) (Neutral amino acid/proton symporter) Length = 475 Score = 36.2 bits (82), Expect = 0.057 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 311 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 451 H++ IG+G+L L A G ++GP++L++ + + G+L C Sbjct: 54 HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
>S36A1_MOUSE (Q8K4D3) Proton-coupled amino acid transporter 1 (Proton/amino acid| transporter 1) (Solute carrier family 36 member 1) Length = 475 Score = 36.2 bits (82), Expect = 0.057 Identities = 14/47 (29%), Positives = 27/47 (57%) Frame = +2 Query: 311 HIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 451 H++ IG+G+L L A G ++GP++L++ + + G+L C Sbjct: 54 HLLKGNIGTGLLGLPLAVKNAGLLLGPLSLLVIGIVAVHCMGILVKC 100
>YSPK_CAEEL (Q19425) Hypothetical protein F13H10.3 in chromosome IV| Length = 615 Score = 35.0 bits (79), Expect = 0.13 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%) Frame = +2 Query: 314 IITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADCYR-----TGDPLTG 478 I ++G+ +L++ WA Q G V+G + ++ AAI +YT+ ++ + + + DPL Sbjct: 172 IWNTMMGTSLLAMPWALQQAGLVLGIIIMLSMAAICFYTAYIVIESPKRLQDLSVDPLLA 231 Query: 479 E 481 E Sbjct: 232 E 232
>AAPQ_RHILV (Q52813) General L-amino acid transport system permease protein| aapQ Length = 400 Score = 32.7 bits (73), Expect = 0.63 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 14/78 (17%) Frame = +2 Query: 272 KQRRTG----TVWTASAHIITAVIGSGVLSLAWATAQL----------GWVVGPVTLMLF 409 +Q TG TVWTA A I+ + V+S T + G VVGP + LF Sbjct: 214 RQAATGQPFHTVWTAIALIVGLPLLVFVVSGFPLTFDVPVAGKFNLTGGSVVGPEFMSLF 273 Query: 410 AAITYYTSGLLADCYRTG 463 A+++YT+ +A+ R G Sbjct: 274 LALSFYTASFIAEIVRGG 291
>TYRP_SHIFL (P0AAD5) Tyrosine-specific transport protein (Tyrosine permease)| Length = 403 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = +2 Query: 272 KQRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 451 K R G+V+ + IG+G+L++ A A +G+ V + L+ A+ YT+ LL + Sbjct: 2 KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57 Query: 452 YR 457 Y+ Sbjct: 58 YQ 59
>TYRP_ECOLI (P0AAD4) Tyrosine-specific transport protein (Tyrosine permease)| Length = 403 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/62 (30%), Positives = 34/62 (54%) Frame = +2 Query: 272 KQRRTGTVWTASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADC 451 K R G+V+ + IG+G+L++ A A +G+ V + L+ A+ YT+ LL + Sbjct: 2 KNRTLGSVFIVAG----TTIGAGMLAMPLAAAGVGFSVTLILLIGLWALMCYTALLLLEV 57 Query: 452 YR 457 Y+ Sbjct: 58 YQ 59
>STP4_ARATH (Q39228) Sugar transport protein 4 (Hexose transporter 4)| Length = 514 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 284 TGTVWTASAHIITAVIGSGVLSLAWATAQLGWVV 385 TG + + A++I A+I V AW+ LGW+V Sbjct: 377 TGNIGKSDANLIVALICIYVAGFAWSWGPLGWLV 410
>BOK_BRARE (Q7T381) Bcl-2-related ovarian killer protein homolog| Length = 211 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/70 (28%), Positives = 32/70 (45%) Frame = +2 Query: 317 ITAVIGSGVLSLAWATAQLGWVVGPVTLMLFAAITYYTSGLLADCYRTGDPLTGERNYTY 496 + AV+ LS+A +G G V AI +GL DC R G P+ +T Sbjct: 99 VEAVVSDAFLSVATEVIAMGITWGKVV-----AIYAVAAGLAVDCVRLGHPV---MVHTI 150 Query: 497 MDAVASYLSR 526 +D++ ++ R Sbjct: 151 VDSLGEFVRR 160
>EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Contains:| Epidermal growth factor] Length = 1214 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 391 RPDDPAELCRRPGEGEHAGADDGRDDVRTGCPYRPCSP 278 RP +P +C P H G +DGR VR Y C P Sbjct: 943 RPSEPGRICPDPTPPSHLG-EDGRYSVRNS--YSECPP 977
>STP10_ARATH (Q9LT15) Sugar transport protein 10 (Hexose transporter 10)| Length = 514 Score = 28.9 bits (63), Expect = 9.1 Identities = 15/34 (44%), Positives = 19/34 (55%) Frame = +2 Query: 284 TGTVWTASAHIITAVIGSGVLSLAWATAQLGWVV 385 TGT+ A+A I A I V AW+ LGW+V Sbjct: 379 TGTLTPATADWILAFICVYVAGFAWSWGPLGWLV 412 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,428,597 Number of Sequences: 219361 Number of extensions: 706378 Number of successful extensions: 2358 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2304 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2356 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
