ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet01e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
2dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
3dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
4dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
5dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
6dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
7dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
8dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-24
9ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predic... 109 2e-21
10emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 98 8e-18
11emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 98 8e-18
12dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 98 8e-18
13gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate de... 90 2e-15
14emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phospha... 56 3e-05
15emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chlo... 56 3e-05
16gb|AY103602.1| Zea mays PCO093211 mRNA sequence 56 3e-05
17gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogena... 56 3e-05
18gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosph... 56 3e-05
19gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 46 0.025
20gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat)... 42 0.39
21gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat)... 42 0.39
22emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceralde... 42 0.39
23gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mR... 42 0.39
24ref|XM_483629.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.6
25gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) g... 40 1.6
26gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) g... 40 1.6
27gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) g... 40 1.6
28gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) g... 40 1.6
29gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) g... 40 1.6
30gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, com... 40 1.6
31gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) ... 40 1.6
32gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (t... 40 1.6
33emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 1.6
34emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 1.6
35gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome 40 1.6
36gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag)... 40 1.6
37dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
38gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral pro... 40 1.6
39gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome 40 1.6
40dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
41gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, comple... 40 1.6
42gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, comple... 40 1.6
43gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat pro... 40 1.6
44gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat prot... 40 1.6
45gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat pro... 40 1.6
46gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat pro... 40 1.6
47gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mR... 40 1.6
48gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mR... 40 1.6
49gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mR... 40 1.6
50gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mR... 40 1.6
51gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mR... 40 1.6
52gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mR... 40 1.6
53gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mR... 40 1.6
54gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mR... 40 1.6
55gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mR... 40 1.6
56gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mR... 40 1.6
57gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample ... 40 1.6
58dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein... 40 1.6
59gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 6.2
60ref|XM_874829.1| PREDICTED: Bos taurus similar to nuclear recept... 38 6.2
61ref|XM_874740.1| PREDICTED: Bos taurus similar to nuclear recept... 38 6.2
62ref|XM_603681.2| PREDICTED: Bos taurus similar to nuclear recept... 38 6.2
63gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 6.2
64gb|AF422800.4| Pseudomonas oleovorans strain NRRL B-14682 polyhy... 38 6.2
65gb|BC114768.1| Bos taurus cDNA clone MGC:138109 IMAGE:8089193, c... 38 6.2
66emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 6.2
67gb|AY044827.1| Sus scrofa H19 gene, complete sequence 38 6.2
68dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, comp... 38 6.2
69ref|XM_687171.1| PREDICTED: Danio rerio similar to KIAA1343 prot... 38 6.2
70dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific ... 38 6.2
71gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, comp... 38 6.2
72ref|XM_345850.2| PREDICTED: Rattus norvegicus nuclear factor of ... 38 6.2
73gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19... 38 6.2
74emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceralde... 38 6.2
75emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 ... 38 6.2
76tpe|BN000505.3| TPA: TPA_inf: Magnaporthe grisea 70-15 syn8 gene... 38 6.2
77dbj|AB050606.1| Branchiostoma belcheri Amphiop1 mRNA for opsin, ... 38 6.2
78gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 38 6.2 
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full
           insert sequence
          Length = 1468

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 149
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>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full
           insert sequence
          Length = 1366

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 149
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>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full
           insert sequence
          Length = 1540

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 154
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>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full
           insert sequence
          Length = 1538

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 154
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>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full
           insert sequence
          Length = 1566

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 154
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>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full
           insert sequence
          Length = 1473

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 154
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>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full
           insert sequence
          Length = 1571

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 34  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 93

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 150
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>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full
           insert sequence
          Length = 778

 Score =  117 bits (59), Expect = 8e-24
 Identities = 103/117 (88%), Gaps = 3/117 (2%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 74
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 39  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 98

                                                                    
Query: 75  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 99  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 155
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>ref|XM_472744.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  109 bits (55), Expect = 2e-21
 Identities = 99/113 (87%), Gaps = 3/113 (2%)
 Strand = Plus / Plus

                                                                       
Query: 22  atggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgctggag 78
           ||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  ||||
Sbjct: 1   atggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtcggag 60

                                                                
Query: 79  ttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61  ttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 113
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
              complete sequence
          Length = 138969

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                       
Query: 75     ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
              |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 120791 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 120847



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 18     ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64
              ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 120634 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 120680
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>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
            complete sequence
          Length = 176383

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                     
Query: 75   ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
            |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 6472 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 6528



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 18   ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64
            ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 6315 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 6361
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 97.6 bits (49), Expect = 8e-18
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 75       ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
                |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22912016 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctc 22912072



 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 18       ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 64
                ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 22911859 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 22911905
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>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit
           (GAPDH) mRNA, partial cds
          Length = 1073

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 101/118 (85%), Gaps = 5/118 (4%)
 Strand = Plus / Plus

                                                                       
Query: 18  ggacatggcgtcgcccatgctctccacggccatggcgccactccagggg----ggcatgc 73
           ||||||||||||||| ||||||||| | ||||  | |||||||||||||    ||| || 
Sbjct: 41  ggacatggcgtcgcc-atgctctccgccgccaccgtgccactccaggggaggcggcttgt 99

                                                                     
Query: 74  tggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
            ||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 100 cggatttctccggcctgaggagctcgtcgtcgctgccgctgcggcgggatgccacctc 157
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>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit
            A
          Length = 6414

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 76   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctc 1758
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>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA)
           glyceraldehyde-3-phosphate dehydrogenase
          Length = 1382

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 76  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||
Sbjct: 1   gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctc 56
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>gb|AY103602.1| Zea mays PCO093211 mRNA sequence
          Length = 1490

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 76  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||
Sbjct: 91  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctc 146
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>gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogenase mRNA, 5' end
          Length = 386

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 76  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||
Sbjct: 72  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctc 127
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>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene,
            complete cds, clone lambda-gapA1
          Length = 6414

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                    
Query: 76   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctc 1758
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 46.1 bits (23), Expect = 0.025
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 60     ccaggggggcatgctggagttct 82
              |||||||||||||||||||||||
Sbjct: 154385 ccaggggggcatgctggagttct 154363
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>gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  ctgaggagctcgtcgtcgctg 108
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
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>gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  ctgaggagctcgtcgtcgctg 108
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
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>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 5922

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 91   aggagctcgtcgtcgctgccgctccggcggaatgccacctc 131
            ||||||||  ||||||||||| | || ||||||||||||||
Sbjct: 1757 aggagctccgcgtcgctgccgatgcgccggaatgccacctc 1797
to top
>gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 88  ctgaggagctcgtcgtcgctg 108
           |||||||||||||||||||||
Sbjct: 207 ctgaggagctcgtcgtcgctg 187
to top
>ref|XM_483629.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 528

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  agctcgtcgtcgctgccgct 113
           ||||||||||||||||||||
Sbjct: 501 agctcgtcgtcgctgccgct 482
to top
>gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) gene, partial cds
          Length = 297

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 211 tgaggagctcgtcgtcgctg 192
to top
>gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) gene, partial cds
          Length = 295

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
to top
>gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) gene, partial cds
          Length = 292

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
to top
>gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) gene, partial cds
          Length = 285

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 198 tgaggagctcgtcgtcgctg 179
to top
>gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) gene, partial cds
          Length = 262

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 175 tgaggagctcgtcgtcgctg 156
to top
>gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, complete genome
          Length = 9031

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 5443 tgaggagctcgtcgtcgctg 5424
to top
>gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
to top
>gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
to top
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     tgctggagttctccgggctg 90
              ||||||||||||||||||||
Sbjct: 180213 tgctggagttctccgggctg 180232
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    tgctggagttctccgggctg 90
             ||||||||||||||||||||
Sbjct: 13755 tgctggagttctccgggctg 13774
to top
>gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome
          Length = 9192

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 5575 tgaggagctcgtcgtcgctg 5556
to top
>gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag) and pol protein
            (pol) genes, partial cds; and vif protein (vif), vpr
            protein (vpr), tat protein (tat), rev protein (rev), vpu
            protein (vpu), envelope glycoprotein (env), and nef
            protein (nef) genes, complete cds
          Length = 8791

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 5210 tgaggagctcgtcgtcgctg 5191
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 94       agctcgtcgtcgctgccgct 113
                ||||||||||||||||||||
Sbjct: 27356053 agctcgtcgtcgctgccgct 27356034
to top
>gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral protein ZmNIP2-1 mRNA,
           complete cds
          Length = 1293

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  ggggggcatgctggagttct 82
           ||||||||||||||||||||
Sbjct: 282 ggggggcatgctggagttct 263
to top
>gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome
          Length = 8415

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 4843 tgaggagctcgtcgtcgctg 4824
to top
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    agctcgtcgtcgctgccgct 113
             ||||||||||||||||||||
Sbjct: 57580 agctcgtcgtcgctgccgct 57561
to top
>gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
to top
>gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   tgaggagctcgtcgtcgctg 108
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
to top
>gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample 1995, tat protein (tat)
           gene, partial cds
          Length = 216

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 89  tgaggagctcgtcgtcgctg 108
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein, complete cds (exon1,
           exon2)
          Length = 2429

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  agctcgtcgtcgctgccgct 113
           ||||||||||||||||||||
Sbjct: 704 agctcgtcgtcgctgccgct 685
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 64      gggggcatgctggagttctccgg 86
               ||||||||||| |||||||||||
Sbjct: 2441598 gggggcatgcttgagttctccgg 2441576
to top
>ref|XM_874829.1| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 4 (LOC525329), mRNA
          Length = 3463

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  tggagttctccgggctgag 92
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>ref|XM_874740.1| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 3 (LOC525329), mRNA
          Length = 3357

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  tggagttctccgggctgag 92
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>ref|XM_603681.2| PREDICTED: Bos taurus similar to nuclear receptor coactivator 4,
           transcript variant 2 (LOC525329), mRNA
          Length = 3490

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  tggagttctccgggctgag 92
           |||||||||||||||||||
Sbjct: 171 tggagttctccgggctgag 189
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 64      gggggcatgctggagttctccgg 86
               ||||||||||| |||||||||||
Sbjct: 3656744 gggggcatgcttgagttctccgg 3656722
to top
>gb|AF422800.4| Pseudomonas oleovorans strain NRRL B-14682 polyhydroxybutyrate
            synthase (phbC) gene, complete cds; and beta-ketothiolase
            (phbA) gene, partial cds
          Length = 2334

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 32   ccatgctctccacggccatggcg 54
            ||||| |||||||||||||||||
Sbjct: 1066 ccatggtctccacggccatggcg 1088
to top
>gb|BC114768.1| Bos taurus cDNA clone MGC:138109 IMAGE:8089193, complete cds
          Length = 3524

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  tggagttctccgggctgag 92
           |||||||||||||||||||
Sbjct: 170 tggagttctccgggctgag 188
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 64      gggggcatgctggagttctccgg 86
               ||||||||||| |||||||||||
Sbjct: 3399452 gggggcatgcttgagttctccgg 3399430
to top
>gb|AY044827.1| Sus scrofa H19 gene, complete sequence
          Length = 56404

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    gcccatgctctccacggcc 48
             |||||||||||||||||||
Sbjct: 30221 gcccatgctctccacggcc 30239
to top
>dbj|AP005226.1| Corynebacterium efficiens plasmid pCE3 DNA, complete sequence
          Length = 48672

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    gctggagttctccgggctg 90
             |||||||||||||||||||
Sbjct: 29084 gctggagttctccgggctg 29102
to top
>ref|XM_687171.1| PREDICTED: Danio rerio similar to KIAA1343 protein (LOC563808),
           mRNA
          Length = 1650

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 95  gctcgtcgtcgctgccgct 113
           |||||||||||||||||||
Sbjct: 121 gctcgtcgtcgctgccgct 103
to top
>dbj|AB193030.1| Corynebacterium glutamicum DNA, strain specific island 3, strain: R
          Length = 56248

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    gctggagttctccgggctg 90
             |||||||||||||||||||
Sbjct: 29505 gctggagttctccgggctg 29523
to top
>gb|AC135324.4| Homo sapiens chromosome 8, clone RP11-42L22, complete sequence
          Length = 77514

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    ccaggggggcatgctggagttct 82
             |||| ||||||||||||||||||
Sbjct: 22462 ccagcggggcatgctggagttct 22440
to top
>ref|XM_345850.2| PREDICTED: Rattus norvegicus nuclear factor of kappa light
            polypeptide gene enhancer in B-cells inhibitor-like 2
            (predicted) (Nfkbil2_predicted), mRNA
          Length = 4104

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 67   ggcatgctggagttctccg 85
            |||||||||||||||||||
Sbjct: 2708 ggcatgctggagttctccg 2690
to top
>gb|AF546188.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 203363

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 75    ggagttctccgggctgagg 93
             |||||||||||||||||||
Sbjct: 54476 ggagttctccgggctgagg 54458
to top
>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 8839

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 37/43 (86%)
 Strand = Plus / Plus

                                                       
Query: 21   catggcgtcgcccatgctctccacggccatggcgccactccag 63
            ||||||| |||||||||||||| |  ||| || ||||||||||
Sbjct: 4732 catggcgacgcccatgctctccgccaccacggtgccactccag 4774
to top
>emb|AL954145.13| Zebrafish DNA sequence from clone CH211-284E20 in linkage group 22,
              complete sequence
          Length = 160871

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     gctcgtcgtcgctgccgct 113
              |||||||||||||||||||
Sbjct: 115431 gctcgtcgtcgctgccgct 115413
to top
>tpe|BN000505.3| TPA: TPA_inf: Magnaporthe grisea 70-15 syn8 gene for putative
            polyketide synthase, exons 1-2
          Length = 13004

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 17   tggacatggcgtcgcccat 35
            |||||||||||||||||||
Sbjct: 7834 tggacatggcgtcgcccat 7852
to top
>dbj|AB050606.1| Branchiostoma belcheri Amphiop1 mRNA for opsin, complete cds
          Length = 1298

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  gctggagttctccgggctg 90
           |||||||||||||||||||
Sbjct: 171 gctggagttctccgggctg 153
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 38.2 bits (19), Expect = 6.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 64      gggggcatgctggagttctccgg 86
               ||||||||||| |||||||||||
Sbjct: 1449303 gggggcatgcttgagttctccgg 1449325


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 753,192
Number of Sequences: 3902068
Number of extensions: 753192
Number of successful extensions: 52309
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51853
Number of HSP's gapped (non-prelim): 455
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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