>PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 235

 Score =  106 bits (265), Expect = 1e-23
 Identities = 57/81 (70%), Positives = 57/81 (70%)
 Frame = +1

Query: 46  SLSAYIKTFXXXXXXXXXXXXXXXXXXXXXXXDIAGLTPCKESKAFAKREKQSVKKLNSS 225
           SLSA IKTF                       DIAGLTPCKESKAFAKREKQSVKKLNSS
Sbjct: 46  SLSASIKTFSAALALSSVLLSSAATSPPPAAADIAGLTPCKESKAFAKREKQSVKKLNSS 105

Query: 226 LKKYAPDSAPALAIQATIDKT 288
           LKKYAPDSAPALAIQATIDKT
Sbjct: 106 LKKYAPDSAPALAIQATIDKT 126

>PSAF_FLATR (P46486) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 232

 Score = 84.3 bits (207), Expect = 7e-17
 Identities = 41/49 (83%), Positives = 46/49 (93%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           DI+GLTPCKESK FAKREKQS+KKL SSLK YAPDSAPALAI+AT++KT
Sbjct: 79  DISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKT 127

>PSAF_SPIOL (P12355) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F)
          Length = 231

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           DIAGLTPCKESK FAKREKQ++KKL +SLK YA DSAPALAI+AT++KT
Sbjct: 78  DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKT 126

>PSAF_CHLRE (P12356) Photosystem I reaction center subunit III, chloroplast|
           precursor (Light-harvesting complex I 17 kDa protein)
           (PSI-F) (P21 protein)
          Length = 227

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 30/49 (61%), Positives = 40/49 (81%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           DIAGLTPC ESKA+AK EK+ +K L   LK+Y  DSAPA+A++AT+++T
Sbjct: 63  DIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERT 111

>PSAF_CYAPA (P48115) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 186

 Score = 58.5 bits (140), Expect = 4e-09
 Identities = 27/49 (55%), Positives = 35/49 (71%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           D+AGL PC +S AF +R K + ++L + LKKY P SAPA A+Q  IDKT
Sbjct: 26  DVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKT 74

>PSAF_GUITH (O78457) Photosystem I reaction center subunit III (PSI-F)|
          Length = 183

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 27/49 (55%), Positives = 34/49 (69%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           D+AGL PCK SK F +R   SVKKL S L KY P++ P LA++  I+KT
Sbjct: 23  DVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKT 71

>PSAF_ODOSI (P49483) Photosystem I reaction center subunit III (PSI-F)|
          Length = 185

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 28/49 (57%), Positives = 32/49 (65%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           DI GLT C ES AF KR K SVKKL   + KY   S PALA+Q  I++T
Sbjct: 25  DIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERT 73

>PSAF_PORPU (P51193) Photosystem I reaction center subunit III (PSI-F)|
          Length = 185

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 26/49 (53%), Positives = 34/49 (69%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           ++AGL PCK+S AF KR   SVKKL + L KY  ++ PALA+   I+KT
Sbjct: 25  EVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKT 73

>PSAF_CUCSA (P42048) Photosystem I reaction center subunit III (Photosystem I|
           18.5 kDa protein) (PSI-F) (PS I subunit 7) (Fragment)
          Length = 26

 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSVKKL 216
           DI+GLTPCKESK F KREKQ  K L
Sbjct: 1   DISGLTPCKESKQFXKREKQQXKXL 25

>PSAF_PEA (P20119) Photosystem I reaction center subunit III|
           (Light-harvesting complex I 17 kDa protein) (PSI-F)
           (Fragment)
          Length = 20

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +1

Query: 145 IAGLTPCKESKAFAKREKQ 201
           I+GLTPCKESK FAKREKQ
Sbjct: 2   ISGLTPCKESKQFAKREKQ 20

>PSAF_CYACA (Q9TLW6) Photosystem I reaction center subunit III (PSI-F)|
          Length = 187

 Score = 35.0 bits (79), Expect = 0.049
 Identities = 17/45 (37%), Positives = 25/45 (55%)
 Frame = +1

Query: 154 LTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT 288
           LTPC+ S  F  R   ++KKL + L  Y  +S    +I+  I+KT
Sbjct: 31  LTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKT 75

>PSAF_MAIZE (P13193) Photosystem I reaction center subunit III|
           (Light-harvesting complex I 17 kDa protein) (PSI-F)
           (Fragment)
          Length = 20

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 16/18 (88%), Positives = 16/18 (88%)
 Frame = +1

Query: 145 IAGLTPCKESKAFAKREK 198
           IAGLTP KESKAFAK EK
Sbjct: 2   IAGLTPPKESKAFAKXEK 19

>PSAF_SYNEN (P0A402) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 164

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSV 207
           D+AGL PCK+S AF KR   +V
Sbjct: 24  DVAGLVPCKDSPAFQKRAAAAV 45

>PSAF_SYNEL (P0A401) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 164

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSV 207
           D+AGL PCK+S AF KR   +V
Sbjct: 24  DVAGLVPCKDSPAFQKRAAAAV 45

>PSAF_SYNP6 (P31083) Photosystem I reaction center subunit III precursor|
           (PSI-F)
          Length = 159

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKR-EKQSVKKLNSSLKKYA-----PDSAPALAIQATID 282
           D+AGLTPC ES  F +R E  +  +  +  + Y+      D  P L +   +D
Sbjct: 24  DVAGLTPCSESPRFIQRAEAAATPQAKARFENYSQALCGADGLPHLIVDGRLD 76

>AMPH_ECOLI (P0AD70) Penicillin-binding protein ampH|
          Length = 385

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = +1

Query: 145 IAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSA 252
           IA LT    S+   K   Q   KLN  L KYAP  A
Sbjct: 85  IASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA 120

>AMPH_ECO57 (P0AD71) Penicillin-binding protein ampH|
          Length = 385

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 16/36 (44%), Positives = 17/36 (47%)
 Frame = +1

Query: 145 IAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSA 252
           IA LT    S+   K   Q   KLN  L KYAP  A
Sbjct: 85  IASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAPPGA 120

>PSAF_SYNVU (P23078) Photosystem I reaction center subunit III (PSI-F)|
           (Fragment)
          Length = 27

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 142 DIAGLTPCKESKAFAKREKQSV 207
           D+AGL P K+S AF KR   +V
Sbjct: 1   DVAGLVPAKDSPAFQKRAAAAV 22

>PLCB4_RAT (Q9QW07) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
            beta 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
            (Phospholipase C-beta-4) (PLC-beta-4)
          Length = 1175

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 166  KESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQAT-IDK 285
            K+ KA+ K  K+  K+LNS  KK+A + +    +  T +DK
Sbjct: 923  KQMKAYLKHLKKQQKELNSLKKKHAKEHSTMQKLHCTQVDK 963

>PLCB4_HUMAN (Q15147) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
            beta 4 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
            (Phospholipase C-beta-4) (PLC-beta-4)
          Length = 1175

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +1

Query: 166  KESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQAT-IDK 285
            K+ KA+ K  K+  K+LNS  KK+A + +    +  T +DK
Sbjct: 923  KQMKAYLKHLKKQQKELNSLKKKHAKEHSTMQKLHCTQVDK 963


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.124    0.326 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,031,501
Number of Sequences: 219361
Number of extensions: 151681
Number of successful extensions: 760
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)