Clone Information

BLAST Search Result

Clone Name	baet01d12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	134	4e-32
2	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	55	5e-08
3	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	54	1e-07
4	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	46	2e-05
5	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	45	3e-05
6	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	45	3e-05
7	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	44	7e-05
8	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	43	2e-04
9	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	42	5e-04
10	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	41	6e-04
11	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	39	0.004
12	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	38	0.005
13	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	38	0.007
14	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	37	0.009
15	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	37	0.015
16	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	37	0.015
17	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	36	0.020
18	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	36	0.025
19	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	36	0.025
20	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	35	0.057
21	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	35	0.057
22	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	34	0.074
23	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	34	0.074
24	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	34	0.074
25	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	34	0.074
26	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	34	0.074
27	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	34	0.074
28	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	34	0.074
29	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	34	0.074
30	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	34	0.074
31	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	34	0.074
32	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	34	0.097
33	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	34	0.097
34	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	34	0.097
35	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	34	0.097
36	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	33	0.17
37	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	33	0.17
38	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	33	0.17
39	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	33	0.17
40	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	33	0.17
41	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	33	0.17
42	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	33	0.17
43	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	33	0.17
44	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	33	0.22
45	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	32	0.28
46	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	32	0.28
47	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	32	0.28
48	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	32	0.37
49	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	32	0.37
50	MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial p...	32	0.37
51	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	32	0.37
52	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	32	0.37
53	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	32	0.37
54	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	32	0.37
55	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	32	0.48
56	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	32	0.48
57	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	32	0.48
58	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	32	0.48
59	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	32	0.48
60	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	32	0.48
61	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	31	0.63
62	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	31	0.63
63	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	31	0.63
64	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	31	0.63
65	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	31	0.63
66	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	31	0.82
67	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	30	1.1
68	AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	30	1.4
69	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	30	1.4
70	NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor (Na(+)/Ca...	30	1.4
71	EDD_RHIME (Q9Z3S0) Phosphogluconate dehydratase (EC 4.2.1.12) (6...	30	1.4
72	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	30	1.8
73	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	30	1.8
74	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	30	1.8
75	AROC_WOLSU (Q7M841) Chorismate synthase (EC 4.2.3.5) (5-enolpyru...	29	2.4
76	SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Gl...	29	2.4
77	NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor (Na(+)/...	29	2.4
78	OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein CPn_1034/CP0...	29	3.1
79	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	29	3.1
80	GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) ...	29	3.1
81	GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2...	29	3.1
82	GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4....	28	4.1
83	RUVB_SYNSC (Q3AND8) Holliday junction ATP-dependent DNA helicase...	28	4.1
84	CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deace...	28	4.1
85	RUVB_SYNP7 (Q31Q03) Holliday junction ATP-dependent DNA helicase...	28	4.1
86	RUVB_SYNP6 (Q5N474) Holliday junction ATP-dependent DNA helicase...	28	4.1
87	REP2_YEAST (P03872) Trans-acting factor C (REP2) (Protein charlie)	28	5.3
88	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	28	5.3
89	CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ...	28	5.3
90	RUVB_SYNEL (Q8DGR1) Holliday junction ATP-dependent DNA helicase...	28	5.3
91	SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (...	28	6.9
92	RUVB_SYNY3 (Q57396) Holliday junction ATP-dependent DNA helicase...	28	6.9
93	GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4....	28	6.9
94	FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein	28	6.9
95	CRTI_SYNY4 (P21134) Phytoene dehydrogenase (EC 1.14.99.-) (Phyto...	28	6.9

>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score =  134 bits (338), Expect = 4e-32
 Identities = 61/72 (84%), Positives = 66/72 (91%)
 Frame = +1

Query: 175 FVVRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWL 354
           FVVRA+S+PP KQ  NRQLWFASKQSL+YLDG LPGDFGFDPLGLSDPEGTGGFIEP+WL
Sbjct: 37  FVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWL 96

Query: 355 AYGEIFNGRTAM 390
           AYGE+ NGR AM
Sbjct: 97  AYGEVINGRFAM 108

to top

>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +R LWF       +LDG+LPGDFGFDPLGL SDPE        +W A  E+ + R AM
Sbjct: 64  DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAM 115



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/46 (43%), Positives = 23/46 (50%)
 Frame = +1

Query: 253 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAM 230

to top

>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query: 184 RASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAY 360
           R++++     + +R LWF       +LDG+LPGDFGFDPLGL SDPE        RW   
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQ 105

Query: 361 GEIFNGRTAM 390
            E+ + R AM
Sbjct: 106 AELVHCRWAM 115



 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/46 (43%), Positives = 23/46 (50%)
 Frame = +1

Query: 253 LTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LT  D   PG   FDPLG     G+G   + + L   EI NGR AM
Sbjct: 189 LTGTDVGYPGGLWFDPLGW----GSGSPAKIKELRTKEIKNGRLAM 230

to top

>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           +R LWF   +S  YLDG+L GD+GFDP GL  P
Sbjct: 51  DRPLWFPGAKSPEYLDGSLVGDYGFDPFGLGKP 83

to top

>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           W     S  YL G+L GD GFDPLGL+ DPE        +W    E+ NGR AM
Sbjct: 57  WLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQAELVNGRWAM 104

to top

>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
 Frame = +1

Query: 175 FVVRASSSPPAKQNDNRQLWFASKQS------LTYLDGTLPGDFGFDPLGL-SDPEGTGG 333
           FVV A++  P K       W  + +S        +LDG+LPGDFGFDPLGL  DP     
Sbjct: 42  FVVAAAAVAPKKS------WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDP----A 91

Query: 334 FIEPRWLAYGEIFNGRTAM 390
           F+  +W    E+ +GR AM
Sbjct: 92  FL--KWYREAELIHGRWAM 108

to top

>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +LDG+LPGDFGFDPLGL  DP     F+  +W    E+ +GR AM
Sbjct: 75  WLDGSLPGDFGFDPLGLGKDP----AFL--KWYREAELIHGRWAM 113

to top

>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +LDG+LPGD+GFDPLGL  DP     F+  +W    E+ +GR AM
Sbjct: 70  WLDGSLPGDYGFDPLGLGKDP----AFL--KWYREAELIHGRWAM 108

to top

>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 18/30 (60%), Positives = 21/30 (70%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           LW  +     +LDG+LPGD GFDPLGLS P
Sbjct: 51  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKP 80

to top

>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +1

Query: 220 NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           +R LW+    S  +LDG+L GD+GFDP GL  P
Sbjct: 54  DRPLWYPGAISPDWLDGSLVGDYGFDPFGLGKP 86

to top

>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLSD 315
           W   +   +YLDG+ PGDFGFD LGL +
Sbjct: 49  WMPGQPRPSYLDGSAPGDFGFDSLGLGE 76

to top

>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +1

Query: 175 FVVRASSSPPAK----QND-NRQLWFASKQSLTYLDGTLPGDFGFDPLGLSDP 318
           F  +  + PP K    Q+D +R +WF       +LDG++ GD GFDP GL  P
Sbjct: 35  FGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGDRGFDPFGLGKP 87

to top

>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S Q+ +YL+G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM
Sbjct: 60  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFAKNRAL---EVIHGRWAM 104



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/38 (52%), Positives = 21/38 (55%)
 Frame = +1

Query: 277 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           PG   FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 189 PGGQYFDPLGLADDPTT--FAE---LKVKEIKNGRLAM 221

to top

>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S Q+ +YL+G  PGD+G+D  GLS DPE    F   R L   E+ +GR AM
Sbjct: 63  SAQTPSYLNGEFPGDYGWDTAGLSADPE---AFARNRAL---EVIHGRWAM 107



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/38 (52%), Positives = 21/38 (55%)
 Frame = +1

Query: 277 PGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           PG   FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 192 PGGQYFDPLGLADDPVT--FAE---LKVKEIKNGRLAM 224

to top

>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V +SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 5   VASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 60

Query: 358 YGEIFNGRTAM 390
             E+ + R AM
Sbjct: 61  --EVIHSRWAM 69

to top

>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           +SSSP    N  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 46  SSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LWF + +    L G  P D GFDPL L +DP+     +  R +   E+F+GR AM
Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNLAADPD-----VYAR-MRVAEVFHGRLAM 237



 Score = 35.0 bits (79), Expect = 0.043
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LWF +  + ++L+G   GD GFDP GL +DP+          +   E+++GR AM
Sbjct: 4   LWFPNTLAPSWLNGEYYGDRGFDPAGLAADPDTF------ERMRIAEVYHGRLAM 52



 Score = 33.9 bits (76), Expect = 0.097
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 217 DNRQLWFASKQSLTYLDGTLPGDFGFDPLGL-SDP 318
           + R+LWF +     YL G   GD GFDP GL +DP
Sbjct: 369 EERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADP 403

to top

>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 22/46 (47%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           ASSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 44  ASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S +S +YL G  PGD+G+D  GLS DPE    F + R L   E+ +GR AM
Sbjct: 61  SGESPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHGRWAM 105

to top

>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
 Frame = +1

Query: 184 RASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGTG 330
           R     P  +  +  +W+ S + L          +YL G  PGD+G+D  GLS DPE   
Sbjct: 33  RVQMMAPKSKAPSGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPE--- 89

Query: 331 GFIEPRWLAYGEIFNGRTAM 390
            F + R L   E+ + R AM
Sbjct: 90  TFAKNREL---EVIHSRWAM 106

to top

>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S+Q+ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 105

to top

>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 190 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 47  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 46  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 93

to top

>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
 Frame = +1

Query: 190 SSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           SSSP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 45  SSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 34  SEQTPSYLTGEFPGDYGWDTAGLSADPE 61

to top

>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQTPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 61  SEQTPSYLTGEFPGDYGWDTAGLSADPE 88

to top

>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           V +S SP    +  + L   S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 45  VASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPE 92

to top

>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 34.3 bits (77), Expect = 0.074
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q+ +YL G  PGD+G+D  GLS DPE
Sbjct: 60  SEQTPSYLTGEFPGDYGWDTAGLSADPE 87



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 21/43 (48%), Positives = 23/43 (53%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LD   PG   FDPLGL+D   T  F E   L   E+ NGR AM
Sbjct: 183 LDKVYPGG-AFDPLGLADDPDT--FAE---LKVKELKNGRLAM 219

to top

>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           V AS SP    +  + L   S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 39  VAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 94

Query: 358 YGEIFNGRTAM 390
             E+ + R AM
Sbjct: 95  --EVIHSRWAM 103

to top

>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
 Frame = +1

Query: 220 NRQLW---FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 369
           NR  W   ++   +  YL G  PGD+G+D  GLS DPE    +     I  RW   G +
Sbjct: 40  NRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGAL 98



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/42 (50%), Positives = 23/42 (54%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTA 387
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR A
Sbjct: 173 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLA 208

to top

>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = +1

Query: 265 DGTLPGDFGFDPLGL--SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +G  PGD GFDPLGL  SDP+      E R +   E+ +GR AM
Sbjct: 145 EGYEPGDLGFDPLGLAPSDPD------EFRLMQEKELSHGRLAM 182

to top

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 33.9 bits (76), Expect = 0.097
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
 Frame = +1

Query: 205 AKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPE 321
           AKQ  +   W+ S + L          +YL G  PGD+G+D  GLS DPE
Sbjct: 41  AKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGESPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+Q  +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SEQIPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S +S +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGESPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
 Frame = +1

Query: 235 FASKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 369
           F+   +  YL G  PGD+G+D  GLS DP+    +     I  RW   G +
Sbjct: 45  FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGAL 95



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 24/50 (48%), Positives = 26/50 (52%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S+  L  LD   PG   FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 166 SEGFLDDLDTLYPGG-PFDPLGLADDPDT--FAE---LKVKEIKNGRLAM 209

to top

>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S Q  +YL G  PGD+G+D  GLS DPE
Sbjct: 62  SDQIPSYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           S ++ +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 61  SGEAPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 105

to top

>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
 Frame = +1

Query: 220 NRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGF-----IEPRWLAYGEI 369
           +R  W    S  +  YL G  PGD+G+D  GLS DPE    +     I  RW   G +
Sbjct: 43  DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGAL 100



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 176 LDPLYPGE-SFDPLGLADDPDT--FAE---LKVKEIKNGRLAM 212

to top

>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAGLSADPE 91

to top

>MOD5_HUMAN (Q9H3H1) tRNA isopentenyltransferase, mitochondrial precursor (EC|
           2.5.1.8) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPP transferase) (IPTase)
           (IPPT) (hGRO1)
          Length = 467

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 291 AKVTRQRAVEVGEGLLGREPQLPVVILLG-RGAGR 190
           A V   RAV VG GL G +  LP+V++LG  G G+
Sbjct: 2   ASVAAARAVPVGSGLRGLQRTLPLVVILGATGTGK 36

to top

>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLA 357
           A+SS       +R L+    S +  +YL G  PGD+G+D  GLS DPE    F + R L 
Sbjct: 42  AASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL- 97

Query: 358 YGEIFNGRTAM 390
             E+ + R AM
Sbjct: 98  --EVIHSRWAM 106

to top

>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
 Frame = +1

Query: 181 VRASSSPPAKQNDNRQLWFASKQSL----------TYLDGTLPGDFGFDPLGLS-DPEGT 327
           +R +++ P     +   W+ + + L          +YL G  PGD+G+D  GLS DPE  
Sbjct: 32  MRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-- 89

Query: 328 GGFIEPRWLAYGEIFNGRTAM 390
             F + R L   E+ + R AM
Sbjct: 90  -TFAKNREL---EVIHSRWAM 106

to top

>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S ++ +YL G  PGD+G+D  GLS DPE
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADPE 90

to top

>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFA--SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           AS+S       +R L+    S +  +YL G  PGD+G+D  GLS DPE
Sbjct: 51  ASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPE 98

to top

>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 119

to top

>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 80  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 119

to top

>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 47  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 86

to top

>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 57  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 96

to top

>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 63  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 102

to top

>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS DPE    F + R L   E+ + R AM
Sbjct: 65  SYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHSRWAM 104

to top

>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPE 321
           +YL G  PGD+G+D  GLS DPE
Sbjct: 8   SYLTGEFPGDYGWDTAGLSADPE 30

to top

>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +1

Query: 187 ASSSPPAKQNDNRQLWFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           +SSSP    +  + L   S ++ +YL G  P D+G+D  GLS DPE
Sbjct: 46  SSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPE 91

to top

>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPE 321
           +YL G  PGD+G+D  GLS DPE
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE 89

to top

>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +1

Query: 229 LWFASKQSLTYLDGTLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +WF   Q   +L G  P D GFDPL + +DP      +  R +   E+F+ R +M
Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADPT-----VYAR-MRVSEVFHARLSM 209

to top

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPE 321
           +YL G  PGD+G+D  GLS DPE
Sbjct: 67  SYLTGEFPGDYGWDTAGLSADPE 89

to top

>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +1

Query: 259 YLDGTLPGDFGFDPLGL-SDPEGTGGF-----IEPRWLAYG 363
           YL+G + GD+G+DP GL   PE    +     I  RW   G
Sbjct: 84  YLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLG 124

to top

>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLS-DPE 321
           +YL G  PGD+G+D  GLS DPE
Sbjct: 66  SYLTGEFPGDYGWDTEGLSADPE 88

to top

>AROC_METKA (Q8TXN1) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 386

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = -1

Query: 375 VEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 247
           +E +A   PPGL +P      G+  G    +   +AVEVG G+
Sbjct: 216 IEVIAENVPPGLGDPVFGRLDGELAGALMNIPAVKAVEVGSGV 258

to top

>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DP 318
           S ++ +YL G  PGD+G+D  GLS DP
Sbjct: 63  SGEAPSYLTGEFPGDYGWDTAGLSADP 89

to top

>NAC3_RAT (P70549) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = -1

Query: 366 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 214
           +A+G+P  ++    AL +  P+  + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PEVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670

to top

>EDD_RHIME (Q9Z3S0) Phosphogluconate dehydratase (EC 4.2.1.12)|
           (6-phosphogluconate dehydratase)
          Length = 606

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 21/64 (32%), Positives = 28/64 (43%)
 Frame = -1

Query: 378 AVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRG 199
           A+  L  G  P +  PAG +  G P   +AKV +  A    EG +GR+  L        G
Sbjct: 164 AIAALTFGHLPAVFIPAGPMTTGLPNDEKAKVRQLFA----EGKVGRDELLEAESKSYHG 219

Query: 198 AGRC 187
            G C
Sbjct: 220 PGTC 223

to top

>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGL-SDPE 321
           S ++ +YL+G   GD+G+D  GL SDPE
Sbjct: 65  SGETPSYLNGEFAGDYGWDTAGLSSDPE 92

to top

>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = +1

Query: 262 LDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           LD   PG+  FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 194 LDPLYPGE-AFDPLGLADDPDT--FAE---LKVKEIKNGRLAM 230



 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +1

Query: 232 WFASKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           W    Q      G  PGD+G+D  GLS DPE
Sbjct: 66  WDLQHQHPRLPTGEFPGDYGWDTAGLSADPE 96

to top

>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = +1

Query: 256 TYLDGTLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           +YL G  PGD+G+D  GLS    T  F + R L   E+ + R AM
Sbjct: 71  SYLTGEFPGDYGWDTAGLSAYPET--FAKNREL---EVIHSRCAM 110

to top

>AROC_WOLSU (Q7M841) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 360

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 378 AVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGL 247
           A+E  A G P GL EP      G   G    +   +AVE+GEGL
Sbjct: 203 AIEVRAKGMPIGLGEPLYHKLDGALGGALMGLNAVKAVEIGEGL 246

to top

>SYE1_WOLPM (Q73HV5) Glutamyl-tRNA synthetase 1 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 1) (GluRS 1)
          Length = 473

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = -2

Query: 194 DDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPW 90
           D+    K   REE  + K  C   P SC P  R W
Sbjct: 104 DEVAEKKAKAREEGKIYKHKCTTKPPSCHPSSRHW 138

to top

>NAC3_HUMAN (P57103) Sodium/calcium exchanger 3 precursor|
           (Na(+)/Ca(2+)-exchange protein 3)
          Length = 927

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
 Frame = -1

Query: 366 LAVGQPPGLDEPAGALRVGQPQGVEAKVTRQ-----RAVEVGEGLLGREPQLPVVI 214
           +A+G+P  ++    AL +  P   + K+T +     R  E+G+ +LG  P+L V+I
Sbjct: 616 IALGEPKWMERGISALLLS-PDVTDRKLTMEEEEAKRIAEMGKPVLGEHPKLEVII 670

to top

>OMPY_CHLPN (Q9Z6M5) Putative outer membrane protein|
           CPn_1034/CP0818/CPj1034/CpB1074 precursor
          Length = 262

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -2

Query: 218 SFCLAGGLDDALTTKGDFREEDDLEKEDCRGLPSSCLPERRPWAAIVP 75
           +F L   LDD L   G+       + +  +GL     PE+  W A+VP
Sbjct: 41  NFWLILDLDDTLLQGGEALSHSIWKSKAIQGLQKQGTPEQEAWEAVVP 88

to top

>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S ++ +YL G  PGD+G+D   LS DPE
Sbjct: 64  SGEAPSYLTGEFPGDYGWDTAELSADPE 91

to top

>GUC2E_RAT (P51840) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PWGCP  RA AG+++P   P A
Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172

to top

>GUC2E_MOUSE (P52785) Guanylyl cyclase GC-E precursor (EC 4.6.1.2) (Guanylate|
           cyclase 2E)
          Length = 1108

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PWGCP  RA AG+++P   P A
Sbjct: 148 VALVPWGCPGTRA-AGTTAPAVTPAA 172

to top

>GUC2D_CANFA (O19179) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1109

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PW CP  RA  G+++P G P A
Sbjct: 149 VALVPWSCPGTRA-GGTTAPAGTPAA 173

to top

>RUVB_SYNSC (Q3AND8) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 348

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLG 241
           R  A++ + +  PPGL +   A+ + +  GV  KVT   A+E    ++G
Sbjct: 65  RGDALDHVLLYGPPGLGKTTMAMVLAEEMGVHCKVTSAPALERPRDIVG 113

to top

>CBID_METCH (Q9X7G7) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 361

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -1

Query: 342 LDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLGREPQLPVVILLGRGA 196
           ++   GALR G   G  A    + A E    LLG EP+ PV + L  GA
Sbjct: 1   MNSETGALRRGWTTGTCASAAARAAFEA---LLGIEPEDPVPVTLPSGA 46

to top

>RUVB_SYNP7 (Q31Q03) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 375

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLG 241
           R+ +++ L +  PPGL +   AL +    GV+ ++T   A+E    ++G
Sbjct: 76  RQESLDHLLLYGPPGLGKTTMALVLATEMGVQCRITTAPALERPRDIVG 124

to top

>RUVB_SYNP6 (Q5N474) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 375

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLG 241
           R+ +++ L +  PPGL +   AL +    GV+ ++T   A+E    ++G
Sbjct: 76  RQESLDHLLLYGPPGLGKTTMALVLATEMGVQCRITTAPALERPRDIVG 124

to top

>REP2_YEAST (P03872) Trans-acting factor C (REP2) (Protein charlie)|
          Length = 296

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = -1

Query: 375 VEDLAVGQPPGLDEPAGALRVGQPQGVE-----AKVTRQRAVEVGEGLLGRE 235
           +E L  G+P GLD  A    V      E     AK+ ++R   +G G+L  +
Sbjct: 58  MESLTTGRPYGLDSSAEDSSVSSDSSAEVILPAAKMVKERFDSIGNGMLSSQ 109

to top

>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +1

Query: 241 SKQSLTYLDGTLPGDFGFDPLGLS-DPE 321
           S+ + +YL G  PGD+G+D   +S DPE
Sbjct: 63  SEGTPSYLTGEFPGDYGWDTAAVSADPE 90

to top

>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
 Frame = +1

Query: 271 TLPGDFG-----------FDPLGLSDPEGTGGFIEPRWLAYGEIFNGRTAM 390
           T PG FG           FDPLGL+D   T  F E   L   EI NGR AM
Sbjct: 33  TAPGQFGEDLDRLYPGGPFDPLGLADDPDT--FPE---LKVKEIKNGRLAM 78

to top

>RUVB_SYNEL (Q8DGR1) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 363

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLG 241
           R+  ++ L +  PPGL +   AL +    GV  KVT   A+E    ++G
Sbjct: 66  RQEPLDHLLLYGPPGLGKTTIALILAAEMGVNCKVTSAPALERPRDIVG 114

to top

>SALL2_MOUSE (Q9QX96) Sal-like protein 2 (Spalt-like protein 2) (MSal-2)|
          Length = 1004

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +2

Query: 281 VTLASTPWGCPTRRAPAGSSSPGG 352
           V +AST  G PT  APA SSS  G
Sbjct: 604 VAVASTASGAPTTSAPAPSSSASG 627

to top

>RUVB_SYNY3 (Q57396) Holliday junction ATP-dependent DNA helicase ruvB (EC|
           3.6.1.-)
          Length = 361

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQGVEAKVTRQRAVEVGEGLLG 241
           R+ A++ L +  PPGL +   AL + +   V  K+T   A+E    + G
Sbjct: 70  RQEAIDHLLLYGPPGLGKTTLALILAEEMQVRCKITAAPALERPRDITG 118

to top

>GUC2D_BOVIN (P55203) Retinal guanylyl cyclase 1 precursor (EC 4.6.1.2)|
           (Guanylate cyclase 2D, retinal) (RETGC-1) (Rod outer
           segment membrane guanylate cyclase) (ROS-GC) (Guanylate
           cyclase E) (GC-E)
          Length = 1110

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 287 LASTPWGCPTRRAPAGSSSPGGWPTA 364
           +A  PWGCP  RA AG+++P   P A
Sbjct: 150 VALVPWGCPGTRA-AGTTAPVVTPAA 174

to top

>FBSH_HUMAN (Q9HAH7) Probable fibrosin-1 long transcript protein|
          Length = 372

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 301 LGLSDPEGTGGFIEPRWLA 357
           LG S P+   GF+EP WLA
Sbjct: 260 LGPSPPDRCAGFLEPTWLA 278

to top

>CRTI_SYNY4 (P21134) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene|
           desaturase)
          Length = 532

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
 Frame = -1

Query: 387 RRPAVEDLAVGQPPGLDEPAGALRVGQPQG-VEAKVT-----RQRAVEV-GEGLLGREPQ 229
           RRP    L  G   G++     L +G+ +G VEA        R   V+V G+G+ GR+P 
Sbjct: 165 RRPTQPGLIGGDGFGIERQG--LGLGEDRGAVEAAAAIAGPRRDEDVQVRGKGVFGRDPT 222

Query: 228 LPVVIL--------LGRGAG 193
             VV+L        +GRG G
Sbjct: 223 RHVVVLEGAVPDEGIGRGEG 242


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,077,418
Number of Sequences: 219361
Number of extensions: 824915
Number of successful extensions: 2508
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 2367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2506
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result