Clone Information

BLAST Search Result

Clone Name	baet01d09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein hom...	109	2e-24
2	TCTP_ORYSA (P35681) Translationally-controlled tumor protein hom...	100	1e-21
3	TCTP_FRAAN (O03992) Translationally-controlled tumor protein hom...	100	2e-21
4	TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein hom...	97	1e-20
5	TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein hom...	97	1e-20
6	TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein hom...	95	4e-20
7	TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein hom...	92	3e-19
8	TCTP_PEA (P50906) Translationally-controlled tumor protein homol...	92	3e-19
9	TCTP_ARATH (P31265) Translationally-controlled tumor protein hom...	92	3e-19
10	TCTP_SOLTU (P43349) Translationally-controlled tumor protein hom...	90	1e-18
11	TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein hom...	89	4e-18
12	TCTP_MEDSA (P28014) Translationally-controlled tumor protein hom...	87	1e-17
13	TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein hom...	86	2e-17
14	TCTP_SCHPO (Q10344) Translationally-controlled tumor protein hom...	50	2e-06
15	TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)	49	4e-06
16	TCTP_BRUMA (P90697) Translationally-controlled tumor protein hom...	47	1e-05
17	TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)	46	3e-05
18	TCTP_YEAST (P35691) Translationally-controlled tumor protein hom...	46	3e-05
19	TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein hom...	45	4e-05
20	TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP...	44	1e-04
21	TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TC...	44	1e-04
22	TCTP_CHICK (P43347) Translationally-controlled tumor protein (TC...	43	2e-04
23	TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)	41	7e-04
24	TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)	41	7e-04
25	TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TC...	41	7e-04
26	TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)	41	0.001
27	TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)	41	0.001
28	TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)	39	0.003
29	TCTP_CAEEL (Q93573) Translationally-controlled tumor protein hom...	38	0.006
30	TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein hom...	38	0.008
31	TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein hom...	38	0.008
32	TCTP_SCHJA (P91800) Translationally-controlled tumor protein hom...	37	0.017
33	TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)	35	0.065
34	TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)	34	0.085
35	TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein hom...	34	0.085
36	TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein hom...	34	0.11
37	TCTP_HYDAT (Q94587) Translationally-controlled tumor protein hom...	33	0.25
38	FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2	32	0.55
39	TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein hom...	30	1.6
40	YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I	30	1.6
41	TCTP_LUMRU (O18477) Translationally-controlled tumor protein hom...	29	2.7
42	MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein k...	29	3.6
43	SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.1
44	SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pr...	28	6.1
45	CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity fa...	28	6.1
46	CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity fa...	28	6.1
47	CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity fa...	28	6.1
48	CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity fa...	28	7.9

>TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP)|
           (HTP)
          Length = 168

 Score =  109 bits (272), Expect = 2e-24
 Identities = 53/62 (85%), Positives = 53/62 (85%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA        V
Sbjct: 1   MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_ORYSA (P35681) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score =  100 bits (249), Expect = 1e-21
 Identities = 47/62 (75%), Positives = 51/62 (82%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD L+GDELLSDSFPYRE+ENG+LWEVDG WVVQGA+DVDIGANPSA        V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_FRAAN (O03992) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 170

 Score = 99.8 bits (247), Expect = 2e-21
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA 241
           MLVYQD LSGDELLSDSFPY+E++NGVLWEVDG WVVQGAVDVDIGANPSA
Sbjct: 1   MLVYQDLLSGDELLSDSFPYKEIQNGVLWEVDGKWVVQGAVDVDIGANPSA 51

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>TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD L+GDELLSDSFPY+E+ NG+LWEV+G WVVQGAVDVDIGANPSA        V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA 241
           M+VYQD LSGDELLSDSFPY+EL NGVLWEV+G WVVQGAVDVDIGANPSA
Sbjct: 1   MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSA 51

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>TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD +SGDELLSDSFPY+E+ENG++WEV+G WVV+GAVDVDIGANPSA        V
Sbjct: 1   MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 44/62 (70%), Positives = 50/62 (80%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD L+GDELLSDSF Y+E+ENG+LWEV+G WVV+GAVDVDIGANPSA        V
Sbjct: 1   MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_PEA (P50906) Translationally-controlled tumor protein homolog (TCTP)|
           (23 kDa callus protein) (p23) (PsRCI22-3)
          Length = 167

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 41/51 (80%), Positives = 49/51 (96%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA 241
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WVV+GAVDV+IGANPSA
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSA 51

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>TCTP_ARATH (P31265) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 92.0 bits (227), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD L+GDELLSDSFPY+E+ENG+LWEV+G WV  GAVDV+IGANPSA        V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYKEIENGILWEVEGKWVTVGAVDVNIGANPSAEEGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_SOLTU (P43349) Translationally-controlled tumor protein homolog (TCTP)|
           (p23)
          Length = 168

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 43/62 (69%), Positives = 48/62 (77%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD L+GDELLSDSFPY E++NG+LWEV G WVV GAVDV+IGANPSA        V
Sbjct: 1   MLVYQDLLTGDELLSDSFPYTEIQNGMLWEVHGKWVVHGAVDVNIGANPSAEGGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 45/62 (72%), Positives = 46/62 (74%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVYQD LSGDEL SDSF Y EL NGVLWEV G WVVQGAVDV+IGANPSA        V
Sbjct: 1   MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_MEDSA (P28014) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA 241
           MLVYQD L+GDELLSDS+PY+E+ENG+LWEV+G WV +G V+VDIGAN SA
Sbjct: 1   MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASA 51

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>TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 168

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 39/62 (62%), Positives = 47/62 (75%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAXXXXXXXXV 268
           MLVY D L+GDELLSDSFPY+E+ENG+LWEV+G W  +G V+V+IGANPSA        V
Sbjct: 1   MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGV 60

Query: 269 XD 274
            D
Sbjct: 61  DD 62

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>TCTP_SCHPO (Q10344) Translationally-controlled tumor protein homolog (TCTP)|
           (p23fyp)
          Length = 168

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 26/52 (50%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVDIGANPSA 241
           ML+Y+D +SGDEL+SD++  +E+++ +++E D   V V+   DVDIGANPSA
Sbjct: 1   MLLYKDVISGDELVSDAYDLKEVDD-IVYEADCQMVTVKQGGDVDIGANPSA 51

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>TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   D+D   IG N SA
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASA 54

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>TCTP_BRUMA (P90697) Translationally-controlled tumor protein homolog (TCTP)|
           (TPH-1)
          Length = 181

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSA 241
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPSA
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPSA 51

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>TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)|
          Length = 171

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D ++GDE+ SD +  +E ENG++ EV+G  + +   ++D   IG N SA
Sbjct: 1   MIIYKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASA 54

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>TCTP_YEAST (P35691) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 24/51 (47%), Positives = 35/51 (68%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSA 241
           M++Y+D  S DELLSD++  + L + V++E D   V  G  ++DIGANPSA
Sbjct: 1   MIIYKDIFSNDELLSDAYDAK-LVDDVIYEADCAMVNVGGDNIDIGANPSA 50

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>TCTP_WUCBA (Q962A2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPS 238
           ML+++D  + DEL SDSFP + L +G++WE  G  VV+   ++ + GANPS
Sbjct: 1   MLIFKDAFTDDELASDSFPMK-LVDGLIWEFKGRQVVRREGEIQLAGANPS 50

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>TCTP_RAT (P63029) Translationally-controlled tumor protein (TCTP) (Lens|
           epithelial protein)
          Length = 172

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSA 241
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SA
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASA 54

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>TCTP_MOUSE (P63028) Translationally-controlled tumor protein (TCTP) (p23) (21|
           kDa polypeptide) (p21)
          Length = 172

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVD-IGANPSA 241
           M++Y+D +S DEL SD +  RE+ +G+  EV+G  V   +GA+D   IG N SA
Sbjct: 1   MIIYRDLISHDELFSDIYKIREIADGLCLEVEGKMVSRTEGAIDDSLIGGNASA 54

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>TCTP_CHICK (P43347) Translationally-controlled tumor protein (TCTP) (p23)|
           (pCHK23)
          Length = 172

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D +S DE+ SD +  RE+ NG+  EV+G  V +    +D   IG N SA
Sbjct: 1   MIIYRDCISQDEMFSDIYKIREVANGLCLEVEGKMVTRTEGQIDDSLIGGNASA 54

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>TCTP_LATJA (Q6XSH4) Translationally-controlled tumor protein (TCTP)|
          Length = 170

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSA 241
           M++Y+  +SGDE+ SD+F  +E  NG+ +EVDG    +     D  I AN SA
Sbjct: 1   MIIYKCIISGDEMFSDAFKVKESANGIFYEVDGKITTRTDNIDDSLISANASA 53

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>TCTP_PIG (P61288) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SA
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASA 54

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>TCTP_HUMAN (P13693) Translationally-controlled tumor protein (TCTP) (p23)|
           (Histamine-releasing factor) (HRF) (Fortilin)
          Length = 172

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SA
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASA 54

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>TCTP_RABIT (P43348) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D +S DE+ SD +  RE+  G+  EV+G  V +   ++D   IG N SA
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREIAGGLCLEVEGKMVSRTEGNIDDSLIGGNASA 54

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>TCTP_BOVIN (Q5E984) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M++Y+D +S DE+ SD +  RE+ +G+  EV+G  V +   ++D   IG N SA
Sbjct: 1   MIIYRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASA 54

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>TCTP_XENTR (Q66JC5) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSA 241
           M++Y+D ++ DE+ SD +   E  +G+ +EV+G  +  V+GA+ D  IG N SA
Sbjct: 1   MIIYKDTVTEDEMFSDIYKIAETPDGMCFEVEGKIIQRVEGAIDDALIGGNASA 54

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>TCTP_CAEEL (Q93573) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 181

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSA 241
           ML+Y+D  + DEL SDSFP + L + +++E  G  VV+   ++ + G+NPSA
Sbjct: 1   MLIYKDIFTDDELSSDSFPMK-LVDDLVYEFKGKHVVRKEGEIVLAGSNPSA 51

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>TCTP_PLUXY (Q60FS1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSA 241
           M +Y+D ++GDE+ SD++  + L + V++EV G  V +   DV I G NPSA
Sbjct: 1   MRIYKDIITGDEMFSDTYKMK-LVDEVIYEVTGKLVTRTHGDVQIEGFNPSA 51

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>TCTP_LONON (Q5MGM6) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 37.7 bits (86), Expect = 0.008
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAVDVDIGANPSA 241
           M +Y+D ++GDE+ SD++  + L + V++EV G  V   QG + +D G NPSA
Sbjct: 1   MRIYKDIITGDEMFSDTYKVK-LVDEVIYEVTGKLVSRTQGDIQID-GFNPSA 51

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>TCTP_SCHJA (P91800) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 169

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV-VQGAVDVD-IGANPS 238
           M V++D +SGDE+ SDS    +L N V++EVD +++ V   +D   I ANPS
Sbjct: 1   MRVFKDAISGDEMFSDSHS-PQLINDVVYEVDANFITVSNGLDSKLIAANPS 51

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>TCTP_XENLA (Q7ZYF2) Translationally-controlled tumor protein (TCTP)|
          Length = 172

 Score = 34.7 bits (78), Expect = 0.065
 Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWV--VQGAV-DVDIGANPSA 241
           M++Y+D ++ DE+ SD +   E  +G+  EV+G  +   +GA+ D  IG N SA
Sbjct: 1   MIIYKDCITEDEMFSDIYKIIETPDGMCLEVEGKVIQREEGAIDDALIGGNASA 54

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>TCTP_BRABE (Q95VY2) Translationally-controlled tumor protein (TCTP)|
          Length = 169

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ-GAVDVD-IGANPSA 241
           M++Y+D +SGDE+ SD++  + L++   +E++G    + G +D   IG N SA
Sbjct: 1   MIIYKDIVSGDEMFSDAYKMKVLDD-YFYELEGKITTEKGGIDESAIGGNASA 52

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>TCTP_DROME (Q9VGS2) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 34.3 bits (77), Expect = 0.085
 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSA 241
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SA
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDDVIYEVYGKLITRQGDDIKLEGANASA 51

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>TCTP_DROYA (Q6XIN1) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 172

 Score = 33.9 bits (76), Expect = 0.11
 Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDI-GANPSA 241
           M +Y+D ++GDE+ +D++  + L + V++EV G  + +   D+ + GAN SA
Sbjct: 1   MKIYKDIITGDEMFADTYKMK-LVDEVIYEVYGKLITRQGDDIKLEGANASA 51

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>TCTP_HYDAT (Q94587) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 184

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHW 193
           M +Y    +G E+ SD++P++  + G +W VDG +
Sbjct: 1   MYIYNCIFTGKEVFSDAYPHKLEDEGFVWVVDGKY 35

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>FKSG2_HUMAN (Q9HAU6) Apoptosis inhibitor FKSG2|
          Length = 173

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPSA 241
           M+++QD +S +E+ SD +   E+ NG+  EV+   + +   + D   IG N S+
Sbjct: 1   MIIFQDLISHNEMFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSS 54

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>TCTP_SCHMA (Q95WA2) Translationally-controlled tumor protein homolog (TCTP)|
           (Histamine-releasing factor) (Fragment)
          Length = 166

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVD---IGANPS 238
           M+VY+D ++ DE+ +DS   R + +   +EVD  +    + +VD   IGANPS
Sbjct: 1   MIVYKDMITEDEMFTDSHCPRVVAD-FFYEVDSRFTTVSS-NVDGRLIGANPS 51

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>YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I|
          Length = 670

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = +3

Query: 48  FSLFSGEKSQEAASCSCTRTSFPAMNSCRIPSRTGSWRTVCSGKSMAIGSF 200
           +++ + E  ++  SCSCT      ++ C  P+ + +W T+   K+  I  F
Sbjct: 82  YAVDNEEVKKDVISCSCTIYPLVFLHCCTSPNDSSTWDTLTKLKNEIINDF 132

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>TCTP_LUMRU (O18477) Translationally-controlled tumor protein homolog (TCTP)|
          Length = 167

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 89  MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQ--GAVDVDIGANPSA 241
           M++++D   G EL SDSFP   L N  +++V G          D  IG N SA
Sbjct: 1   MIIFKDVFPGVELFSDSFPV-SLVNETVYKVKGKLRTDTFAIDDKAIGGNASA 52

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>MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein kinase|
           precursor (EC 2.7.10.1) (Muscle-specific tyrosine
           protein kinase receptor) (Muscle-specific kinase
           receptor) (MuSK)
          Length = 947

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 239 QRGWHQCPHQLLLERPNGHRLPRAHRSPAPCT 144
           QRG ++ P  +LL  P  +RLP  H+ P+ CT
Sbjct: 419 QRGIYK-PGLMLLALPECNRLPSLHQDPSACT 449

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>SFRS3_MOUSE (P84104) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20) (X16 protein)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>SFRS3_HUMAN (P84103) Splicing factor, arginine/serine-rich 3 (Pre-mRNA-splicing|
           factor SRP20)
          Length = 164

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 221 CPHQLLLERPNGHRLPRAHRSPAPCTGRNPTGVHRRKACPGTR 93
           C  ++ +E  NG +  R +R P P  GR P   +RR++ P  R
Sbjct: 72  CGCRVRVELSNGEKRSR-NRGPPPSWGRRPRDDYRRRSPPPRR 113

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>CPSF2_MOUSE (O35218) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_HUMAN (Q9P2I0) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_BOVIN (Q10568) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 782

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -3

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI+ EF+ G LV
Sbjct: 711 HQSVFMNEPRLSDFK-----QVLLREGIQAEFVGGVLV 743

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>CPSF2_XENLA (Q9W799) Cleavage and polyadenylation specificity factor, 100 kDa|
           subunit (CPSF 100 kDa subunit)
          Length = 783

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 217 HINCSLNDPMAIDFPEHTVLQLPVREGIRQEFIAGKLV 104
           H +  +N+P   DF      Q+ +REGI  EF+ G LV
Sbjct: 712 HQSVFMNEPRLSDFK-----QVLLREGIHAEFVGGVLV 744


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,933,105
Number of Sequences: 219361
Number of extensions: 609218
Number of successful extensions: 2015
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2011
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result