ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet01b07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 55 1e-07
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 53 4e-07
3PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 49 6e-06
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 42 6e-04
5XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1... 28 8.9

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 33/56 (58%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLG 420
           D LKLG CA+                   CCSLL GL +LEAAVCLCTA+KAN+LG
Sbjct: 57  DALKLGVCADVLNLVHNVVIGSPPTL--PCCSLLEGLVNLEAAVCLCTAIKANILG 110



to top

>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 29/59 (49%), Positives = 34/59 (57%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGIVL 429
           D LKL  CA                  ++CC LL GL DL+AA+CLCTA+KANVLGI L
Sbjct: 51  DALKLKVCAKVLGLVKVGLPQY-----EQCCPLLEGLVDLDAALCLCTAIKANVLGIHL 104



to top

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 24/57 (42%), Positives = 30/57 (52%)
 Frame = +1

Query: 253 DTLKLGACANXXXXXXXXXXXXXXXXXDKCCSLLGGLADLEAAVCLCTALKANVLGI 423
           D LKLGAC +                   CC LLGGL DL+AA+CLCT ++  +L I
Sbjct: 264 DALKLGACVDVLGGLIHIGIGGSAKQT--CCPLLGGLVDLDAAICLCTTIRLKLLNI 318



to top

>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +1

Query: 334 DKCCSLLGGLADLEAAVCLCTALKANVLGIV 426
           D CC+L+GGL D+EA VCLC  L+A  LGI+
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRA--LGIL 54



to top

>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 28  TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 141
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,892,165
Number of Sequences: 219361
Number of extensions: 323922
Number of successful extensions: 1173
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top