Clone Name | baak0c03 |
---|---|
Clone Library Name | barley_pub |
>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 967 Score = 733 bits (370), Expect = 0.0 Identities = 421/437 (96%), Gaps = 4/437 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 343 cccagcaaggagcgtgagttccctgggcaggtgctccgctacgaggacaacttcgacgcc 402 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 403 accagcaacctctccgttataatcaaccccactaccaagaagaccatcaccgactacggt 462 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 463 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggtggc 522 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||| Sbjct: 523 aagaccgactccgagggtgggttcgagtcagacgctgtggcgacggcgaacgtgctggag 582 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 583 agctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcacgaggacc 642 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 702 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 703 ctctacgtctgcaaggcgcaa---cgagacaaga-ggtggttcaagggcgccaagaagtt 758 Query: 421 cgtcgagaacgccgcag 437 ||||||||||||||||| Sbjct: 759 cgtcgagaacgccgcag 775
>ref|NM_186247.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1114 Score = 410 bits (207), Expect = e-111 Identities = 373/428 (87%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 419 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 478 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 479 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 538 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| |||| Sbjct: 539 tcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggc 598 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 599 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 658 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||| || ||||||||||||||| |||||||||| || ||||| Sbjct: 659 agctcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacg 718 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 719 gcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaag 778 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || ||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 779 ctgtacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaagtt 837 Query: 421 cgtcgaga 428 |||||||| Sbjct: 838 cgtcgaga 845
>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full insert sequence Length = 1078 Score = 410 bits (207), Expect = e-111 Identities = 373/428 (87%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 375 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 434 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 435 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 494 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| |||| Sbjct: 495 tcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggc 554 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 555 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 614 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||| || ||||||||||||||| |||||||||| || ||||| Sbjct: 615 agctcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacg 674 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 675 gcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaag 734 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || ||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 735 ctgtacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaagtt 793 Query: 421 cgtcgaga 428 |||||||| Sbjct: 794 cgtcgaga 801
>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full insert sequence Length = 1114 Score = 410 bits (207), Expect = e-111 Identities = 373/428 (87%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 419 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 478 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 479 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 538 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| |||| Sbjct: 539 tcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggc 598 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 599 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 658 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||| || ||||||||||||||| |||||||||| || ||||| Sbjct: 659 agctcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacg 718 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 719 gcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaag 778 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || ||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 779 ctgtacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaagtt 837 Query: 421 cgtcgaga 428 |||||||| Sbjct: 838 cgtcgaga 845
>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete cds Length = 1107 Score = 410 bits (207), Expect = e-111 Identities = 373/428 (87%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 394 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 453 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 454 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 513 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| |||| Sbjct: 514 tcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggc 573 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 574 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 633 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||| || ||||||||||||||| |||||||||| || ||||| Sbjct: 634 agctcggcgccggtggtgggagggaagcagtactacagcgtaacggtgctgacgaggacg 693 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 694 gcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaag 753 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || ||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 754 ctgtacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaagtt 812 Query: 421 cgtcgaga 428 |||||||| Sbjct: 813 cgtcgaga 820
>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II, complete cds Length = 1008 Score = 379 bits (191), Expect = e-102 Identities = 372/428 (86%), Gaps = 4/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 336 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 395 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 396 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 455 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| |||||||||||| ||||||||| |||| | || ||| ||||| ||||| |||| Sbjct: 456 tcccccgaggagttcctcgcccaggtcgacttcttgcttggcaagcaggcctactccggc 515 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 516 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 575 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | |||||||||||||||||| || |||| |||||||||| |||||||||| || ||||| Sbjct: 576 agctcggcgccggtggtgga-gggaagc-gtactacagcgtaacggtgctgacgaggacg 633 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| | ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 634 gcggacggcgacgaggg-cgcaagcaccagctgatcacggccaccgtcaacgacggcaag 692 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || ||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||||| Sbjct: 693 ctgtacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaagtt 751 Query: 421 cgtcgaga 428 |||||||| Sbjct: 752 cgtcgaga 759
>gb|AY103732.1| Zea mays PCO073407 mRNA sequence Length = 1083 Score = 361 bits (182), Expect = 1e-96 Identities = 372/435 (85%), Gaps = 1/435 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 397 cccagcaaggagcgggagttccccgggcaggtgctccgctacgaggacaacttcgacgcc 456 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| | ||||| || || | ||||| |||||||||||||| |||||||||| Sbjct: 457 aacagcaacgtgtccgtcatcatccagcccacgtccaagaagaccatcgccgactacggc 516 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 || || |||||||||||||||||||||| || ||| |||||| |||| ||||||||||| Sbjct: 517 tctcccgaggagttcctctcccaggtcgactacctgctcggcaggcaggcctacggcggc 576 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 |||||||||||||||||||| |||||| | | ||| ||||| || |||||||| || ||| Sbjct: 577 aagaccgactccgagggcgggttcgagaccggcgccgtggccaccgccaacgtcctggag 636 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||| | || ||| | ||||| |||||||||||| | | | |||||||||||||| Sbjct: 637 agctccacccccgtgatcgacggcaagcagtactacgccgtgtccgtgctcaccaggacg 696 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||||||| | ||||||||| ||||||||||| Sbjct: 697 gcggacggcgacgagggcggcaagcaccagctcatcgcggccaccgtctccgacggcaag 756 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 |||||| ||||||||||||| ||||| ||||||| |||||||||||||||||| |||| Sbjct: 757 ctctacatctgcaaggcgcaggccggcgacaaga-ggtggttcaagggcgccaggaaggg 815 Query: 421 cgtcgagaacgccgc 435 |||||||| ||||| Sbjct: 816 agtcgagaaggccgc 830
>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds Length = 1031 Score = 291 bits (147), Expect = 1e-75 Identities = 358/428 (83%), Gaps = 1/428 (0%) Strand = Plus / Plus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||| | || |||||| ||||| Sbjct: 377 cccagcaaggagcgcgagttccccggacaggtcctccgctacaaagagaacttccacgcc 436 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 ||||||| ||||||| ||||| |||||| |||||||||||||| || |||| | ||| Sbjct: 437 gacagcaacgtctccgtcataatcaacccccccaccaagaagaccgtcgccgagttcggc 496 Query: 121 tcccctgaggagttcctctcccaggtcggcttcctcctcggccagcagtcctacggcggc 180 ||||| | || |||||| |||| |||| |||| | || ||| ||||| ||||| |||| Sbjct: 497 tccccccaagaattcctcccccaagtcgacttcttgcttggcaagcaggcctactccggc 556 Query: 181 aagaccgactccgagggcggcttcgagtcagacgctgtggcgacggccaacgtgctcgag 240 ||||| || |||||||| || || ||||| ||||| ||||||||||| ||| | || ||| Sbjct: 557 aagacagattccgagggtgggtttgagtcggacgcggtggcgacggcgaacatcctggag 616 Query: 241 anctcggcgccggtggtggacggtaagcagtactacagcataacggtgctcaccaggacc 300 | ||||||||||||||||| || ||||||||| ||||| |||||||||| || ||||| Sbjct: 617 agctcggcgccggtggtgggagggaagcagtaccacagcgtaacggtgctgacgaggacg 676 Query: 301 gcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgccgacggcaag 360 |||||||| |||||||| || ||||||||||| ||||| ||||||||| |||||||||| Sbjct: 677 gcggacggcgacgagggcggcaagcaccagctgatcacggccaccgtcaacgacggcaag 736 Query: 361 ctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagtt 420 || || ||||||||||||| |||| ||||||| |||||||||||||||||| |||||| Sbjct: 737 ctgaacatctgcaaggcgcagcccggcgacaaga-ggtggttcaagggcgccaggaagtt 795 Query: 421 cgtcgaga 428 ||||||| Sbjct: 796 tgtcgaga 803
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 224 bits (113), Expect = 2e-55 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 205 gagtcagacgctgtggcgacggccaacgtgctcgaganctcggcgccggtggtggacggt 264 ||||| ||||| ||||||||||| ||| | || |||| ||||||||||||||||| || Sbjct: 2169522 gagtcggacgcggtggcgacggcgaacatcctggagagctcggcgccggtggtgggaggg 2169463 Query: 265 aagcagtactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaag 324 ||||||||||||||| |||||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 2169462 aagcagtactacagcgtaacggtgctgacgaggacggcggacggcgacgagggcggcaag 2169403 Query: 325 caccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgcaagcc 384 |||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||| ||| Sbjct: 2169402 caccagctgatcacggccaccgtcaacgacggcaagctgtacatctgcaaggcgcaggcc 2169343 Query: 385 ggagacaagagggtggttcaagggcgccaagaagttcgtcgaga 428 || ||||||| |||||||||||||||||| |||||||||||||| Sbjct: 2169342 ggcgacaaga-ggtggttcaagggcgccaggaagttcgtcgaga 2169300 Score = 174 bits (88), Expect = 2e-40 Identities = 131/146 (89%) Strand = Plus / Minus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 2170072 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 2170013 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 2170012 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 2169953 Query: 121 tcccctgaggagttcctctcccaggt 146 ||||| |||||||||||| ||||||| Sbjct: 2169952 tcccccgaggagttcctcgcccaggt 2169927
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 224 bits (113), Expect = 2e-55 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 205 gagtcagacgctgtggcgacggccaacgtgctcgaganctcggcgccggtggtggacggt 264 ||||| ||||| ||||||||||| ||| | || |||| ||||||||||||||||| || Sbjct: 37424 gagtcggacgcggtggcgacggcgaacatcctggagagctcggcgccggtggtgggaggg 37365 Query: 265 aagcagtactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaag 324 ||||||||||||||| |||||||||| || ||||| |||||||| |||||||| || ||| Sbjct: 37364 aagcagtactacagcgtaacggtgctgacgaggacggcggacggcgacgagggcggcaag 37305 Query: 325 caccagctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaaggcgcaagcc 384 |||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||| ||| Sbjct: 37304 caccagctgatcacggccaccgtcaacgacggcaagctgtacatctgcaaggcgcaggcc 37245 Query: 385 ggagacaagagggtggttcaagggcgccaagaagttcgtcgaga 428 || ||||||| |||||||||||||||||| |||||||||||||| Sbjct: 37244 ggcgacaaga-ggtggttcaagggcgccaggaagttcgtcgaga 37202 Score = 174 bits (88), Expect = 2e-40 Identities = 131/146 (89%) Strand = Plus / Minus Query: 1 cccagcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgcc 60 |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 37974 cccagcaaggagcgcgagttccccggacaggtcctccgctacgaggacaacttcgacgcc 37915 Query: 61 accagcaacctctccgttataatnaaccccaccaccaagaagaccatcaccgactacggt 120 | ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 37914 aacagcaacgtctccgtcataatcaaccccaccaccaagaagaccatcaccgagttcggc 37855 Query: 121 tcccctgaggagttcctctcccaggt 146 ||||| |||||||||||| ||||||| Sbjct: 37854 tcccccgaggagttcctcgcccaggt 37829
>gb|AF037458.1|AF037458 Fritillaria agrestis photosystem II oxygen evolving complex protein 2 precursor (psbP) mRNA, complete cds Length = 970 Score = 73.8 bits (37), Expect = 4e-10 Identities = 107/129 (82%), Gaps = 1/129 (0%) Strand = Plus / Plus Query: 292 accaggaccgcggacggagacgagggagggaagcaccagctcatcaccgccaccgtcgcc 351 |||||||| || |||||||| || ||||| |||||||| | ||| |||| || ||| | Sbjct: 640 accaggactgctgacggagatgaaggaggcaagcaccatgttatctccgcaactgtcaca 699 Query: 352 gacggcaagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgc 411 || || ||||||||| |||||||||| || ||||| |||||||| ||||||||||| || Sbjct: 700 gatggtaagctctacatctgcaaggcacaggccggggacaagaga-tggttcaagggagc 758 Query: 412 caagaagtt 420 ||||||||| Sbjct: 759 caagaagtt 767 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 87 ccccaccaccaagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| |||||||| | ||||| |||||||| |||| |||||||||||||| Sbjct: 435 ccccacctccaagaagtcaatcactgactacggcaccccagaggagttcctctc 488 Score = 52.0 bits (26), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 16 gagttccctgggcaggtgctccgttacgangacaacttcgacgccaccagcaa 68 |||||||| || |||||||| | ||||| ||||||||||||| ||||||||| Sbjct: 364 gagttcccaggtcaggtgctaaggtacgaggacaacttcgacgtcaccagcaa 416
>emb|X63007.1|LEPSBXMR L.esculentum psbX mRNA for photosystem II 23 kDa protein Length = 997 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 516 caagaagtccatcaccgactacggctcccctgaagagttcctctc 560
>emb|X05511.1|SOOEC23 Spinach mRNA 23 kDa protein of the photosynthetic oxygen-evolving complex (OEC) Length = 1000 Score = 65.9 bits (33), Expect = 1e-07 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 352 gacggcaagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgc 411 ||||| ||||| ||| |||||||||| ||||| |||||||||| | ||||||||||| || Sbjct: 731 gacggtaagctttacatctgcaaggctcaagctggagacaaga-gatggttcaagggtgc 789 Query: 412 caagaagttcgtcgaga 428 |||||||| ||||||| Sbjct: 790 taagaagtttgtcgaga 806 Score = 48.1 bits (24), Expect = 0.024 Identities = 36/40 (90%) Strand = Plus / Plus Query: 104 ccatcaccgactacggttcccctgaggagttcctctccca 143 ||||||| |||| |||||||||||| || ||||||||||| Sbjct: 483 ccatcacagacttcggttcccctgaagatttcctctccca 522
>emb|X78816.1|NPOEC23 N.pseudonarcissus mRNA for OEC 23 Length = 932 Score = 60.0 bits (30), Expect = 6e-06 Identities = 56/65 (86%) Strand = Plus / Plus Query: 4 agcaaggagcgtgagttccctgggcaggtgctccgttacgangacaacttcgacgccacc 63 ||||||||| |||||||||||| |||||| | || ||||| ||||||||||| ||||| Sbjct: 378 agcaaggaggttgagttccctggtcaggtgttgcggtacgaagacaacttcgataccacc 437 Query: 64 agcaa 68 ||||| Sbjct: 438 agcaa 442
>emb|X99320.1|STPSBPGEN S.tuberosum mRNA for 23 kDa oxygen evolving protein of photosystem II Length = 1089 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| |||||||||||||||| |||||||| || |||||||| Sbjct: 490 caagaagtccatcaccgactacggctcccctgaagaattcctctc 534
>gb|AY486007.1| Thlaspi caerulescens oxygen-evolving system subunit-like mRNA, partial sequence Length = 861 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 432 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 483
>emb|X17213.1|SA23KDP2 S.alba psbP gene for 23 kDa polypeptide of the oxygen-evolving complex of photosystem II Length = 1936 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 860 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 911 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 355 ggcaagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaa 414 |||||||| || ||||||| || ||||| |||||||||| |||||||||| || ||||| Sbjct: 1366 ggcaagctttatatctgcaaagcacaagctggagacaaga-ggtggttcaaaggagccaa 1424
>emb|Y07498.1|SAOES23 Sinapis alba mRNA fragment for 23kD subunit of oxygen evolving system of photosystem II Length = 867 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 388 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 439 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 355 ggcaagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaa 414 |||||||| || ||||||| || ||||| |||||||||| |||||||||| || ||||| Sbjct: 647 ggcaagctttatatctgcaaagcacaagctggagacaaga-ggtggttcaaaggagccaa 705
>emb|Y08886.1|BJ23OESP2 B.juncea mRNA for 23 kD protein of oxygen evolving system of photosystem II Length = 754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| ||||| ||||||||||| |||||| Sbjct: 294 caagaagtccatcactgattacggttctcctgaagagttcctctctcaggtc 345 Score = 46.1 bits (23), Expect = 0.095 Identities = 42/47 (89%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 368 tctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaa 414 ||||||| || ||||| |||||||||| ||||||||||||| ||||| Sbjct: 566 tctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaa 611
>ref|NM_100545.2| Arabidopsis thaliana PSBP (OXYGEN-EVOLVING ENHANCER PROTEIN 2); calcium ion binding AT1G06680 (PSBP) mRNA, complete cds Length = 1085 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 755 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 813 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 814 atttgtcgaga 824 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 493 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 543
>gb|BT015556.1| Arabidopsis thaliana At1g06680 mRNA sequence Length = 561 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 463 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 521 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 522 atttgtcgaga 532 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 201 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 251
>gb|AY096487.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving complex (OEC) (At1g06680) mRNA, complete cds Length = 823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 694 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 752 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 753 atttgtcgaga 763 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 432 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 482
>gb|AY074308.1| Arabidopsis thaliana putative 23 kDa polypeptide of oxygen-evolving comlex protein (At1g06680) mRNA, complete cds Length = 1046 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 751 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 809 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 810 atttgtcgaga 820 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 489 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 539
>gb|AY070469.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 937 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 749 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 807 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 808 atttgtcgaga 818 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 487 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 537
>gb|AY056416.1| Arabidopsis thaliana At1g06680/F4H5_18 mRNA, complete cds Length = 935 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 749 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 807 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 808 atttgtcgaga 818 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 487 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 537
>dbj|AK221243.1| Arabidopsis thaliana mRNA for PSII-P protein, partial cds, clone: RAFL24-01-M24 Length = 292 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 3 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 61 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 62 atttgtcgaga 72
>emb|BX813852.1|CNS0AEBT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZH11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 948 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 737 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 795 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 796 atttgtcgaga 806 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 475 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 525
>emb|BX813677.1|CNS0AE2Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB32ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 739 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 475 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 533 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 534 atttgtcgaga 544 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 213 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 263
>emb|BX815468.1|CNS0ACDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 708 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 766 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 767 atttgtcgaga 777 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 446 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 496
>emb|BX814211.1|CNS0ACB9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 735 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 793 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 794 atttgtcgaga 804 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 473 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 523
>emb|BX814208.1|CNS0ACB8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB60ZH01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 661 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 381 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 439 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 440 atttgtcgaga 450 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 119 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 169
>emb|BX815307.1|CNS0ABGV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1014 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 735 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 793 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 794 atttgtcgaga 804 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| ||||||| || |||||||| || || ||||||||||| Sbjct: 473 caagaagtccatcactgattacggttctcccgaagagttcctctc 517
>emb|BX815232.1|CNS0ABDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS44ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 737 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 795 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 796 atttgtcgaga 806 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 475 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 525
>emb|BX814903.1|CNS0AAGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 570 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 305 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 363 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 364 atttgtcgaga 374 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 43 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 93
>emb|BX814881.1|CNS0AAH2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS16ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 392 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 450 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 451 atttgtcgaga 461 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 130 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 180
>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I, complete sequence Length = 93724 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 4922 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 4864 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 4863 atttgtcgaga 4853 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 5529 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 5478
>gb|AY087305.1| Arabidopsis thaliana clone 33922 mRNA, complete sequence Length = 1067 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 756 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 814 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 815 atttgtcgaga 825 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||| ||||||| || |||||||| || || ||||||||||| ||||| Sbjct: 494 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggt 544
>gb|AC011001.2|AC011001 Arabidopsis thaliana chromosome I BAC F4H5 genomic sequence, complete sequence Length = 91608 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| |||||||||| ||||||||||||| |||| ||| Sbjct: 86008 aagctttacatctgcaaagcacaagctggagacaaga-ggtggttcaagggagccaggaa 85950 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 85949 atttgtcgaga 85939 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 86615 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 86564
>emb|X98108.1|ATPSPB A.thaliana psbP gene Length = 1683 Score = 54.0 bits (27), Expect = 4e-04 Identities = 61/71 (85%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 358 aagctctacgtctgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaa 417 ||||| ||| ||||||| || ||||| ||||||||||| |||||||||||| |||| ||| Sbjct: 1439 aagctttacatctgcaaagcacaagctggagacaagag-gtggttcaagggagccaggaa 1497 Query: 418 gttcgtcgaga 428 || ||||||| Sbjct: 1498 atttgtcgaga 1508 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctcccaggtc 147 ||||||| ||||||| || |||||||| || || ||||||||||| |||||| Sbjct: 832 caagaagtccatcactgattacggttctcccgaagagttcctctctcaggtc 883
>dbj|AB043961.1| Bruguiera gymnorhiza mRNA for oxygen evolving enhancer protein 2, partial cds Length = 482 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 104 ccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||||||||||||| |||||||||||| | || ||||||||||| Sbjct: 182 ccatcaccgactatggttcccctgagcaatttctctcccaggt 224
>gb|AF545584.1| Xerophyta humilis PsbP mRNA, partial cds Length = 732 Score = 52.0 bits (26), Expect = 0.002 Identities = 93/116 (80%) Strand = Plus / Plus Query: 31 gtgctccgttacgangacaacttcgacgccaccagcaacctctccgttataatnaacccc 90 ||||| || ||||| ||||||||||| |||| ||||||||| |||| || | | || Sbjct: 352 gtgctgcggtacgaggacaacttcgatgccaacagcaaccttgccgtcatggtccagcca 411 Query: 91 accaccaagaagaccatcaccgactacggttcccctgaggagttcctctcccaggt 146 ||| ||||||| ||||||| |||| ||||||||||| |||||||| ||| |||| Sbjct: 412 accgacaagaagtccatcactgactttggttcccctgaagagttcctttccaaggt 467 Score = 44.1 bits (22), Expect = 0.38 Identities = 85/106 (80%) Strand = Plus / Plus Query: 271 tactacagcataacggtgctcaccaggaccgcggacggagacgagggagggaagcaccag 330 ||||||| |||| |||| ||||| ||||| || ||||| || || || |||||||||||| Sbjct: 592 tactacaacatatcggttctcacgaggactgccgacggggatgaaggtgggaagcaccag 651 Query: 331 ctcatcaccgccaccgtcgccgacggcaagctctacgtctgcaagg 376 | ||| |||| ||||| | || || ||||||||| | ||||||| Sbjct: 652 attatcgccgcaaccgtgtcggatgggaagctctacatttgcaagg 697
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 321 gaagcaccagctcatcaccgccaccgtcgccg 352 ||||||||||||| |||||||| ||||||||| Sbjct: 4994443 gaagcaccagctcctcaccgccgccgtcgccg 4994412
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Plus Query: 348 cgccgacggcaagctctacgtctgcaaggcg 378 |||||||||||||| ||||| |||||||||| Sbjct: 3966251 cgccgacggcaagccctacgactgcaaggcg 3966281
>gb|AC010064.7| Drosophila melanogaster 3L BAC RP98-22I16 (Roswell Park Cancer Institute Drosophila BAC library) complete sequence Length = 199396 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 ggcttcctcctcggccagcagt 169 |||||||||||||||||||||| Sbjct: 39184 ggcttcctcctcggccagcagt 39205
>ref|NM_141003.2| Drosophila melanogaster CG3634-RA (CG3634), mRNA Length = 2312 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 ggcttcctcctcggccagcagt 169 |||||||||||||||||||||| Sbjct: 894 ggcttcctcctcggccagcagt 873
>gb|AY071424.1| Drosophila melanogaster RE50559 full length cDNA Length = 2327 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 ggcttcctcctcggccagcagt 169 |||||||||||||||||||||| Sbjct: 894 ggcttcctcctcggccagcagt 873
>gb|AE003592.3| Drosophila melanogaster chromosome 3L, section 73 of 83 of the complete sequence Length = 323816 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 ggcttcctcctcggccagcagt 169 |||||||||||||||||||||| Sbjct: 179492 ggcttcctcctcggccagcagt 179513
>gb|AC026122.14| Homo sapiens 12 BAC RP11-902D13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184834 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gaggagttcctctcccaggtc 147 ||||||||||||||||||||| Sbjct: 114443 gaggagttcctctcccaggtc 114423
>dbj|AB236819.1| Trifolium pratense RNA for putative PSII-P protein, partial cds, clone: C214 Length = 915 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 97 aagaagaccatcaccgactacggttcccctgaggagttcct 137 |||||| ||||||| ||||||||||| ||||| ||||||| Sbjct: 429 aagaagtccatcactgactacggttcacctgaacagttcct 469
>gb|AY952374.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 23 kDa subunit (psbP) mRNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 426 caagaagtccatcactgactttggttcccctgaacagttcctctc 470
>emb|X64348.1|NT23WOP2B N.tabacum mRNA for 23 kDa polypeptide of water-oxidizing complex of photosystem II Length = 742 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 260 caagaagtccatcactgactttggttcccctgaacagttcctctc 304
>emb|X62427.1|NTT232AF N.tabacum mRNA (T23-2AF) for PSII 23-kDa polypeptide Length = 1080 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 96 caagaagaccatcaccgactacggttcccctgaggagttcctctc 140 ||||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 532 caagaagtccatcactgactttggttcccctgaacagttcctctc 576
>ref|NM_128632.2| Arabidopsis thaliana calcium ion binding AT2G30790 mRNA, complete cds Length = 786 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| |||||||||| |||||||||| || || | ||||||||| ||||| Sbjct: 700 tgcaaagctcaagcaggagacaaga-ggtggttcaaaggagctaggaagttcgttgagaa 758 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 372 cgaggacaactttgacgccaccagcaa 398
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 cgtcgccgacggcaagctctacgt 368 ||||||||||||||||| |||||| Sbjct: 1153049 cgtcgccgacggcaagccctacgt 1153026
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgccgacggcaagctctacg 367 |||||||||||||||||||| Sbjct: 88365 cgccgacggcaagctctacg 88384
>gb|BT015608.1| Arabidopsis thaliana At2g30790 mRNA sequence Length = 581 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| ||||||||||| ||||||||| || || | ||||||||| ||||| Sbjct: 495 tgcaaagctcaagcaggagacaagag-gtggttcaaaggagctaggaagttcgttgagaa 553 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 167 cgaggacaactttgacgccaccagcaa 193
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence Length = 205352 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 gttccctgggcaggtgctcc 37 |||||||||||||||||||| Sbjct: 150381 gttccctgggcaggtgctcc 150362
>gb|AF333150.1| Dermatocarpon miniatum var. complicatum isolate SH50 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; 28S ribosomal RNA gene, partial sequence Length = 555 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccgccaccgtcgccgacggc 357 |||||||||||||||||||| Sbjct: 390 ccgccaccgtcgccgacggc 371
>emb|X57568.1|SGAMYLASE S.griseus DNA for alpha amylase gene, amy Length = 2271 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 tcaccgccaccgtcgccgacggca 358 |||||||||||||||||| ||||| Sbjct: 1636 tcaccgccaccgtcgccgccggca 1659
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 cgccgacggcaagctctacgtctg 371 ||||||||||||| |||||||||| Sbjct: 1236721 cgccgacggcaagatctacgtctg 1236698
>emb|AJ505987.1|SGA505987 Streptomyces galbus secD, secF and apt genes Length = 4312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 caagggcgccaagaagttcg 422 |||||||||||||||||||| Sbjct: 929 caagggcgccaagaagttcg 948
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ctcggcgccggtggtggacg 262 |||||||||||||||||||| Sbjct: 1285642 ctcggcgccggtggtggacg 1285623
>gb|AC002340.3| Arabidopsis thaliana chromosome 2 BAC T11J7 genomic sequence, complete sequence Length = 79574 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Minus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 73515 cgaggacaactttgacgccaccagcaa 73489 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| |||||||||| |||||||||| || || | ||||||||| ||||| Sbjct: 73015 tgcaaagctcaagcaggagacaaga-ggtggttcaaaggagctaggaagttcgttgagaa 72957
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccgccaccgtcgccgacggc 357 |||||||||||||||||||| Sbjct: 2933987 ccgccaccgtcgccgacggc 2933968
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 catcaccgccaccgtcgccgacgg 356 |||||||||||||||| ||||||| Sbjct: 2651045 catcaccgccaccgtccccgacgg 2651022
>gb|BT022094.1| Arabidopsis thaliana At2g30790 mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| ||||||||||| ||||||||| || || | ||||||||| ||||| Sbjct: 707 tgcaaagctcaagcaggagacaagag-gtggttcaaaggagctaggaagttcgttgagaa 765 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 379 cgaggacaactttgacgccaccagcaa 405
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 accagctcatcaccgccacc 345 |||||||||||||||||||| Sbjct: 3268682 accagctcatcaccgccacc 3268701
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ggcgccaagaagttcgtcga 426 |||||||||||||||||||| Sbjct: 2923420 ggcgccaagaagttcgtcga 2923401
>dbj|AK175934.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-60-I02 Length = 936 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| ||||||||||| ||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagag-gtggttcaaaggagctaggaagttcgttgagaa 793 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 407 cgaggacaactttgacgccaccagcaa 433
>dbj|AK175821.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-42-D16 Length = 936 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| ||||||||||| ||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagag-gtggttcaaaggagctaggaagttcgttgagaa 793 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 407 cgaggacaactttgacgccaccagcaa 433
>dbj|AK175738.1| Arabidopsis thaliana mRNA for putative photosystem II oxygen-evolving complex 23K protein, complete cds, clone: RAFL22-28-H07 Length = 936 Score = 40.1 bits (20), Expect = 5.9 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 370 tgcaaggcgcaagccggagacaagagggtggttcaagggcgccaagaagttcgtcgagaa 429 ||||| || ||||| ||||||||||| ||||||||| || || | ||||||||| ||||| Sbjct: 735 tgcaaagctcaagcaggagacaagag-gtggttcaaaggagctaggaagttcgttgagaa 793 Score = 40.1 bits (20), Expect = 5.9 Identities = 25/27 (92%) Strand = Plus / Plus Query: 42 cgangacaacttcgacgccaccagcaa 68 ||| |||||||| |||||||||||||| Sbjct: 407 cgaggacaactttgacgccaccagcaa 433
>gb|AE004997.1| Halobacterium sp. NRC-1 section 28 of 170 of the complete genome Length = 17112 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 caccgccaccgtcgccgacg 355 |||||||||||||||||||| Sbjct: 5410 caccgccaccgtcgccgacg 5429
>dbj|AK110218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-D08, full insert sequence Length = 3457 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 caccgccaccgtcgccgacg 355 |||||||||||||||||||| Sbjct: 2559 caccgccaccgtcgccgacg 2578
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tcaccgccaccgtcgccgac 354 |||||||||||||||||||| Sbjct: 1946869 tcaccgccaccgtcgccgac 1946850
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ctcggcgccggtggtggacg 262 |||||||||||||||||||| Sbjct: 1309419 ctcggcgccggtggtggacg 1309400
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgccgacggcaagctctacg 367 |||||||||||||||||||| Sbjct: 440208 cgccgacggcaagctctacg 440189
>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence Length = 202377 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 gacaagagggtggttcaagg 407 |||||||||||||||||||| Sbjct: 18837 gacaagagggtggttcaagg 18818
>gb|M18244.1|STMAMYSL Streptomyces limosus alpha-amylase gene, complete cds Length = 2291 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 tcaccgccaccgtcgccgacggca 358 |||||||||||||||||| ||||| Sbjct: 1629 tcaccgccaccgtcgccgccggca 1652 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,520,417 Number of Sequences: 3902068 Number of extensions: 2520417 Number of successful extensions: 53729 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 52478 Number of HSP's gapped (non-prelim): 1218 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)