ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baak0b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
2dbj|AK066084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
3dbj|AK065331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
4emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 60 1e-05
5gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574... 44 0.58
6gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, com... 42 2.3
7gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosom... 42 2.3
8ref|NM_010585.2| Mus musculus inositol 1,4,5-triphosphate recept... 42 2.3
9gb|AC124729.4| Mus musculus BAC clone RP23-479H9 from chromosome... 42 2.3
10gb|BC054120.1| Mus musculus integrator complex subunit 7, mRNA (... 42 2.3
11ref|NM_178632.4| Mus musculus integrator complex subunit 7 (Ints... 42 2.3
12dbj|AK137477.1| Mus musculus adult male bone cDNA, RIKEN full-le... 42 2.3
13gb|AC096644.2| Homo sapiens chromosome 1 clone RP11-410C4, compl... 42 2.3
14dbj|AK040344.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 2.3
15dbj|AK052103.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 42 2.3
16dbj|AK034856.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.3
17dbj|AK049015.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 2.3
18dbj|AK086462.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 2.3
19dbj|AK085362.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 2.3
20dbj|AK085336.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 2.3
21ref|XM_223075.3| PREDICTED: Rattus norvegicus similar to DKFZP43... 42 2.3
22emb|X15373.1|MMP400 Mouse cerebellum mRNA for P400 protein 42 2.3
23gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K1... 40 9.0
24gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 9.0
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.0
26gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, c... 40 9.0
27ref|XM_817074.1| Trypanosoma brucei TREU927 clone RPCI93-10K10 k... 40 9.0
28gb|AC093860.3| Homo sapiens BAC clone RP11-538D9 from 4, complet... 40 9.0
29gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, r... 40 9.0
30emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone... 40 9.0
31emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, co... 40 9.0
32gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65... 40 9.0
33emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chr... 40 9.0
34dbj|D14400.1|XELIP3R X. laevis mRNA for inositol 1,4,5-trisphosp... 40 9.0 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Minus

                                                                            
Query: 132      cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 191
                ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 20950967 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 20950908

                                                                            
Query: 192      ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 251
                 ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 20950907 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 20950848

                                                                            
Query: 252      caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 311
                ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 20950847 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 20950788

                      
Query: 312      ctacag 317
                ||||||
Sbjct: 20950787 ctacag 20950782



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 434      agctccgacgactatgatggtggctacaagaa 465
                ||||| ||||||||||||||||||||||||||
Sbjct: 20950591 agctcagacgactatgatggtggctacaagaa 20950560



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                            
Query: 579      agcaccgatgactacagcagtggtaagaatacctncaacactgatgactatgacagcagt 638
                |||||||  ||||||  ||||||||||||  ||| |||||||||||  ||||   |||||
Sbjct: 20950510 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 20950451

                                    
Query: 639      ggctacaacaagtccagcac 658
                ||||||||||| || |||||
Sbjct: 20950450 ggctacaacaaatcaagcac 20950431



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 19       atggcagatgagtatgatcgcagc 42
                ||||||||||||||||||||||||
Sbjct: 20951095 atggcagatgagtatgatcgcagc 20951072



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 637      gtggctacaacaagtccagc 656
                ||||||||||||||||||||
Sbjct: 20950686 gtggctacaacaagtccagc 20950667



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 637      gtggctacaacaagtccagcactg 660
                |||||||||||||||| |||||||
Sbjct: 20950260 gtggctacaacaagtcgagcactg 20950237
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>dbj|AK066084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051M03, full
           insert sequence
          Length = 1261

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Plus

                                                                       
Query: 132 cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 191
           ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 183 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 242

                                                                       
Query: 192 ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 251
            ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 243 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 302

                                                                       
Query: 252 caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 311
           ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 303 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 362

                 
Query: 312 ctacag 317
           ||||||
Sbjct: 363 ctacag 368



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 434 agctccgacgactatgatggtggctacaagaa 465
           ||||| ||||||||||||||||||||||||||
Sbjct: 559 agctcagacgactatgatggtggctacaagaa 590



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                       
Query: 579 agcaccgatgactacagcagtggtaagaatacctncaacactgatgactatgacagcagt 638
           |||||||  ||||||  ||||||||||||  ||| |||||||||||  ||||   |||||
Sbjct: 640 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 699

                               
Query: 639 ggctacaacaagtccagcac 658
           ||||||||||| || |||||
Sbjct: 700 ggctacaacaaatcaagcac 719



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 19 atggcagatgagtatgatcgcagc 42
          ||||||||||||||||||||||||
Sbjct: 55 atggcagatgagtatgatcgcagc 78



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 637 gtggctacaacaagtccagcactg 660
           |||||||||||||||| |||||||
Sbjct: 890 gtggctacaacaagtcgagcactg 913



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 637 gtggctacaacaagtccagc 656
           ||||||||||||||||||||
Sbjct: 464 gtggctacaacaagtccagc 483
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>dbj|AK065331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M22, full
            insert sequence
          Length = 3861

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Plus

                                                                        
Query: 132  cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 191
            ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 2798 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 2857

                                                                        
Query: 192  ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 251
             ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 2858 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 2917

                                                                        
Query: 252  caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 311
            ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 2918 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 2977

                  
Query: 312  ctacag 317
            ||||||
Sbjct: 2978 ctacag 2983



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 434  agctccgacgactatgatggtggctacaagaa 465
            ||||| ||||||||||||||||||||||||||
Sbjct: 3174 agctcagacgactatgatggtggctacaagaa 3205



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 66/80 (82%)
 Strand = Plus / Plus

                                                                        
Query: 579  agcaccgatgactacagcagtggtaagaatacctncaacactgatgactatgacagcagt 638
            |||||||  ||||||  ||||||||||||  ||| |||||||||||  ||||   |||||
Sbjct: 3255 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 3314

                                
Query: 639  ggctacaacaagtccagcac 658
            ||||||||||| || |||||
Sbjct: 3315 ggctacaacaaatcaagcac 3334



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 19   atggcagatgagtatgatcgcagc 42
            ||||||||||||||||||||||||
Sbjct: 2670 atggcagatgagtatgatcgcagc 2693



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 637  gtggctacaacaagtccagcactg 660
            |||||||||||||||| |||||||
Sbjct: 3505 gtggctacaacaagtcgagcactg 3528



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 637  gtggctacaacaagtccagc 656
            ||||||||||||||||||||
Sbjct: 3079 gtggctacaacaagtccagc 3098
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 148/186 (79%), Gaps = 1/186 (0%)
 Strand = Plus / Minus

                                                                         
Query: 132   cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 191
             ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 54198 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 54139

                                                                         
Query: 192   ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 251
              ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 54138 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 54079

                                                                         
Query: 252   caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 311
             ||||||  |||| ||| |||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 54078 caaatccggcacagat-actacagtggtggcggcggctacaacaaatctggcgccgacga 54020

                   
Query: 312   ctacag 317
             ||||||
Sbjct: 54019 ctacag 54014



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 434   agctccgacgactatgatggtggctacaagaa 465
             ||||| ||||||||||||||||||||||||||
Sbjct: 53782 agctcagacgactatgatggtggctacaagaa 53751



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                         
Query: 579   agcaccgatgactacagcagtggtaagaatacctncaacactgatgactatgacagcagt 638
             |||||||  ||||||  ||||||||||||  ||| |||||||||||  ||||   |||||
Sbjct: 53701 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 53642

                                 
Query: 639   ggctacaacaagtccagcac 658
             ||||||||||| || |||||
Sbjct: 53641 ggctacaacaaatcaagcac 53622



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 19    atggcagatgagtatgatcgcagc 42
             ||||||||||||||||||||||||
Sbjct: 54327 atggcagatgagtatgatcgcagc 54304



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 637   gtggctacaacaagtccagcactg 660
             |||||||||||||||| |||||||
Sbjct: 53451 gtggctacaacaagtcgagcactg 53428
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>gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574 (LLNL-R_225F10), complete
            sequence
          Length = 36431

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1    gtttctctttattttgagatgg 22
            ||||||||||||||||||||||
Sbjct: 3936 gtttctctttattttgagatgg 3957
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>gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, complete sequence
          Length = 205300

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 473    gccgatgccggctatggcgaa 493
              |||||||||||||||||||||
Sbjct: 146420 gccgatgccggctatggcgaa 146440
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>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete sequence
          Length = 210128

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 626    ctatgacagcagtggctacaacaag 650
              |||||||||||||||||||| ||||
Sbjct: 191565 ctatgacagcagtggctacagcaag 191589
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>ref|NM_010585.2| Mus musculus inositol 1,4,5-triphosphate receptor 1 (Itpr1), mRNA
          Length = 9848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 620  tgatgactatgacagcagtgg 640
            |||||||||||||||||||||
Sbjct: 2776 tgatgactatgacagcagtgg 2796
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>gb|AC124729.4| Mus musculus BAC clone RP23-479H9 from chromosome 14, complete sequence
          Length = 176086

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 626   ctatgacagcagtggctacaacaag 650
             |||||||||||||||||||| ||||
Sbjct: 19127 ctatgacagcagtggctacagcaag 19151
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>gb|BC054120.1| Mus musculus integrator complex subunit 7, mRNA (cDNA clone
           MGC:59468 IMAGE:6506658), complete cds
          Length = 4206

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 109 gccgatgccggctatggcgaa 129
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>ref|NM_178632.4| Mus musculus integrator complex subunit 7 (Ints7), mRNA
          Length = 4206

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 109 gccgatgccggctatggcgaa 129
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>dbj|AK137477.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830108A05 product:inositol
            1,4,5-triphosphate receptor 1, full insert sequence
          Length = 3806

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 620  tgatgactatgacagcagtgg 640
            |||||||||||||||||||||
Sbjct: 2800 tgatgactatgacagcagtgg 2820
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>gb|AC096644.2| Homo sapiens chromosome 1 clone RP11-410C4, complete sequence
          Length = 151900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     tttctctttattttgagatgg 22
             |||||||||||||||||||||
Sbjct: 80106 tttctctttattttgagatgg 80086
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>dbj|AK040344.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430088A22 product:hypothetical protein,
           full insert sequence
          Length = 1533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 150 gccgatgccggctatggcgaa 170
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>dbj|AK052103.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230046C07 product:hypothetical
           ARM repeat structure containing protein, full insert
           sequence
          Length = 4001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 128 gccgatgccggctatggcgaa 148
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>dbj|AK034856.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430048M23 product:RIKEN cDNA 5930412E23 gene,
           full insert sequence
          Length = 4198

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 126 gccgatgccggctatggcgaa 146
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>dbj|AK049015.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230091M20 product:inositol
            1,4,5-triphosphate receptor 1, full insert sequence
          Length = 3510

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 620  tgatgactatgacagcagtgg 640
            |||||||||||||||||||||
Sbjct: 2412 tgatgactatgacagcagtgg 2432
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>dbj|AK086462.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930030K15 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3253

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 156 gccgatgccggctatggcgaa 176
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>dbj|AK085362.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630016B11 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3178

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 163 gccgatgccggctatggcgaa 183
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>dbj|AK085336.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630013D23 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 128 gccgatgccggctatggcgaa 148
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>ref|XM_223075.3| PREDICTED: Rattus norvegicus similar to DKFZP434B168 protein
           (predicted) (LOC289382), mRNA
          Length = 3010

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 137 gccgatgccggctatggcgaa 157
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>emb|X15373.1|MMP400 Mouse cerebellum mRNA for P400 protein
          Length = 9848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 620  tgatgactatgacagcagtgg 640
            |||||||||||||||||||||
Sbjct: 2776 tgatgactatgacagcagtgg 2796
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>gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K10, complete sequence
          Length = 182660

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    agtcacaaacagtgacgaag 73
             ||||||||||||||||||||
Sbjct: 74898 agtcacaaacagtgacgaag 74879
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 54      agtcacaaacagtgacgaag 73
               ||||||||||||||||||||
Sbjct: 2083287 agtcacaaacagtgacgaag 2083306
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 55      gtcacaaacagtgacgaagg 74
               ||||||||||||||||||||
Sbjct: 5005066 gtcacaaacagtgacgaagg 5005047
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>gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, complete sequence
          Length = 212261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tttctctttattttgagatg 21
              ||||||||||||||||||||
Sbjct: 157058 tttctctttattttgagatg 157039
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>ref|XM_817074.1| Trypanosoma brucei TREU927 clone RPCI93-10K10
           kinetoplast-associated protein (Tb927.8.7260) partial
           mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 54  agtcacaaacagtgacgaag 73
           ||||||||||||||||||||
Sbjct: 335 agtcacaaacagtgacgaag 354
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>gb|AC093860.3| Homo sapiens BAC clone RP11-538D9 from 4, complete sequence
          Length = 191446

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   gaaatcaagcactgaggact 558
             ||||||||||||||||||||
Sbjct: 73367 gaaatcaagcactgaggact 73386
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>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone
              BACR07I18, complete sequence
          Length = 159413

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 135    caacaaatccagcaacgacaacaa 158
              |||||| |||||||||||||||||
Sbjct: 104186 caacaactccagcaacgacaacaa 104163
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>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20
          Length = 74452

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   accaaatctagcaccgatga 269
             ||||||||||||||||||||
Sbjct: 19001 accaaatctagcaccgatga 18982
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>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence
          Length = 141213

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 152  acaacaatgatggtgggtataaga 175
            |||||||||||||||||| |||||
Sbjct: 5056 acaacaatgatggtgggtgtaaga 5033
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>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the
             complete sequence
          Length = 242618

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   caacaaatccagcaacgacaacaa 158
             |||||| |||||||||||||||||
Sbjct: 85524 caacaactccagcaacgacaacaa 85501
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>emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chromosome 1, complete
              sequence
          Length = 259487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    caatggcagtggcagttaca 292
              ||||||||||||||||||||
Sbjct: 138099 caatggcagtggcagttaca 138080
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>dbj|D14400.1|XELIP3R X. laevis mRNA for inositol 1,4,5-trisphosphate receptor, complete
            cds
          Length = 8939

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 621  gatgactatgacagcagtgg 640
            ||||||||||||||||||||
Sbjct: 2552 gatgactatgacagcagtgg 2571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,864,469
Number of Sequences: 3902068
Number of extensions: 4864469
Number of successful extensions: 97483
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97303
Number of HSP's gapped (non-prelim): 176
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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