ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baak0b06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 400 bits (202), Expect = e-108 Identities = 319/356 (89%), Gaps = 8/356 (2%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 1143 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 1202 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| || Sbjct: 1203 gcagtgcgtcagcttcatcgcattcaggccaccgggttgcgaggagtctggcaaggccta 1262 Query: 133 aactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcacttttg 192 ||||||||| | |||||||||||||| |||||| ||||| ||||||||||||||||| Sbjct: 1263 aactacgagttaaaacaatggcctat---gtatgattgtcttttgtgaacttcacttttg 1319 Query: 193 tccatgactctgctttccgactagagcataatttt-cttctctatgatctgtgtttgtac 251 |||| |||||||||| ||||| |||||||| |||| |||| |||||||||||||||||| Sbjct: 1320 tccaggactctgcttcccgaccagagcatatttttccttcggtatgatctgtgtttgtac 1379 Query: 252 gagcattggttgtggagcatatatgcatatgtaaattctagcacggcctacacatataca 311 || ||| ||||||||||| |||||||||||||||||||||| | ||||||||||||| Sbjct: 1380 gaacataggttgtggagc----atgcatatgtaaattctagcaccggctacacatataca 1435 Query: 312 acacctgtgccatatttataatatacaacaagcggaccattgtcttgctgttaatt 367 ||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 1436 acaccagtgtgatatttattatatacaacaagcggaccattgtcctgctgttaatt 1491 Score = 242 bits (122), Expect = 7e-61 Identities = 300/356 (84%), Gaps = 9/356 (2%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||| ||||| || |||| ||||| ||||||||||||| || | ||||| Sbjct: 5547 caagaaggagtaccttgacggctatgtccttatcaacggcttcgacaacatgtgccaggt 5606 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 ||| ||||||| |||||| ||||||| | |||| ||| || |||||||||||||| || Sbjct: 5607 gcattgcgtcactttcatcaccttcagtctaccgacttgtgaggagtccggcaaggccta 5666 Query: 133 aactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcacttttg 192 |||| ||| |||||||||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 5667 gactatgagttgaaacaatggcctat---gtacgaaggtcttttgtgaacttcacttttc 5723 Query: 193 tccatgactctgctttccgactagagcataattttc-ttctctatgatctgtgtttgtac 251 |||| |||||||| | || || |||||||| ||||| |||| ||| || ||||| ||||| Sbjct: 5724 tccacgactctgc-tgcctaccagagcatatttttcgttctgtataatatgtgtatgtac 5782 Query: 252 gagcattggttgtggagcatatatgcatatgtaaattctagcacggcctacacatataca 311 || ||||||||||||||| ||||| ||||||||||||||| | ||||||||||||| Sbjct: 5783 gaacattggttgtggagc----gtgcatgtgtaaattctagcactgactacacatataca 5838 Query: 312 acacctgtgccatatttataatatacaacaagcggaccattgtcttgctgttaatt 367 |||||| || |||||||| ||||||| |||||| || |||||||||||||||||| Sbjct: 5839 acacctatgtgatatttattatatacagcaagcgaactattgtcttgctgttaatt 5894 Score = 143 bits (72), Expect = 5e-31 Identities = 164/192 (85%), Gaps = 7/192 (3%) Strand = Plus / Plus Query: 177 gtgaacttcacttttgtccatgactctgctttccgactagagcataattttc-ttctcta 235 ||||||||||||||| |||| |||||||||||||||| ||||||||||| |||| || Sbjct: 4358 gtgaacttcacttttctccacgactctgctttccgacctaagcataatttttgttctgta 4417 Query: 236 tgatctgtgtttgtacgagcattggttgtggagcatatatgcatatgtaaattctagcac 295 |||||||||| ||||| | ||| ||||||||||||| |||| |||||| |||||||| Sbjct: 4418 tgatctgtgtatgtacaaacataggttgtggagcat----gcatgtgtaaactctagcac 4473 Query: 296 ggcctacacatatacaacacctgtgccatatttataatatacaacaagcggaccattgtc 355 | ||||| |||||||||| ||| ||| |||| |||||||||||||||||||||||| Sbjct: 4474 cggctaca--tatacaacactggtgtgataattattatatacaacaagcggaccattgtc 4531 Query: 356 ttgctgttaatt 367 |||||||||||| Sbjct: 4532 ttgctgttaatt 4543 Score = 123 bits (62), Expect = 4e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||| | ||||||||||||||||||||||| ||||| Sbjct: 4204 caagaaggagtaccctgacgcctatgtctgcatcatcggcttcgacaacctgcgccaggt 4263 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggtt 110 | ||||||||||||||||| ||||| ||||||| |||| Sbjct: 4264 gtagtgcgtcagcttcatcaccttcgggccacctggtt 4301
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 264 bits (133), Expect = 2e-67 Identities = 171/184 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 1389 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 1448 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1449 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggccta 1508 Query: 133 aactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcacttttg 192 ||||| ||| |||||||||||||||| || ||||||| |||| ||||||||||||||||| Sbjct: 1509 aactatgagttgaaacaatggcctatctcatatgaagatcttttgtgaacttcacttttg 1568 Query: 193 tcca 196 |||| Sbjct: 1569 tcca 1572 Score = 65.9 bits (33), Expect = 9e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 304 catatacaacacctgtgccatatttataatatacaacaagcggaccattgtcttgctgtt 363 ||||| ||| ||||||| |||||| | |||||||||| ||||||||||||||||||||| Sbjct: 1706 catatgcaaaacctgtgtaatatttgttatatacaacacgcggaccattgtcttgctgtt 1765 Query: 364 a 364 | Sbjct: 1766 a 1766
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 202 bits (102), Expect = 6e-49 Identities = 102/102 (100%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 186 bits (94), Expect = 3e-44 Identities = 111/117 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 398 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 457 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 458 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 514
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 182 bits (92), Expect = 5e-43 Identities = 115/123 (93%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||| Sbjct: 494 caagaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggt 553 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| Sbjct: 554 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggcata 613 Query: 133 aac 135 ||| Sbjct: 614 aac 616
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 178 bits (90), Expect = 8e-42 Identities = 110/117 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 518 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 577 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 578 gcagtgcgtcagcttcatcgcattcaggccaccgggttgcgaggagtccggcaaggc 634
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 170 bits (86), Expect = 2e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 677 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 736 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 778
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 170 bits (86), Expect = 2e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 688 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 747 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 789
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 170 bits (86), Expect = 2e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 688 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 747 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 789
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 170 bits (86), Expect = 2e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 601
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 170 bits (86), Expect = 2e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgacgcttatgtccgcgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 170 bits (86), Expect = 2e-39 Identities = 109/117 (93%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| ||||||||||||||||||| || ||||| Sbjct: 865 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctacgccaggt 924 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 925 gcagtgcgtcagcttcattgccttcaggccaccgggttgcgaggagtccggcaaggc 981
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 170 bits (86), Expect = 2e-39 Identities = 109/117 (93%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||| || || |||||| ||| |||||||||||||||||| ||||| Sbjct: 509 caagaaggagtaccctgatgcctatgtccgtgtcaacggcttcgacaacctgcgccaggt 568 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 569 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcgaggagtccggcaaggc 625
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 167 bits (84), Expect = 3e-38 Identities = 113/123 (91%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||| Sbjct: 373 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 432 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| || Sbjct: 433 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggccta 492 Query: 133 aac 135 ||| Sbjct: 493 aac 495
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 167 bits (84), Expect = 3e-38 Identities = 113/123 (91%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||| Sbjct: 222 caagaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggt 281 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 |||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||| || Sbjct: 282 gcagtgcgtcagcttcattgccttcaagccaccgggctgcgaggagtccggcaaggccta 341 Query: 133 aac 135 ||| Sbjct: 342 aac 344
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 167 bits (84), Expect = 3e-38 Identities = 96/100 (96%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 684 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 743 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgc 112 |||||||||||||||||||||||||||||||||||||||| Sbjct: 744 gcagtgcgtcagcttcatcgccttcaggccaccgggttgc 783
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 683 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 742 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 743 gcagtgcgtcagcttcatcgcctttaggccaccgggttgcga 784
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 683 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 742 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 784
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 683 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 742 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 784
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 677 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 736 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 778
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 624 caagaaggagtaccctgacgcgtatgtccgcgtcatcggcttcgacaacctgcgccaggt 683 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 725
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 668 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 727 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 728 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcga 769
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||| || || |||||| |||||||||||||||||||||| ||||| Sbjct: 683 caagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 742 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 784
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 601
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 602
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 163 bits (82), Expect = 5e-37 Identities = 97/102 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 560 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcga 601
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 163 bits (82), Expect = 5e-37 Identities = 108/117 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||| Sbjct: 619 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 678 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 679 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggc 735
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 163 bits (82), Expect = 5e-37 Identities = 108/117 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||| Sbjct: 533 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgccaggt 592 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 593 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggc 649
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 161 bits (81), Expect = 2e-36 Identities = 96/101 (95%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 685 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 744 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcg 113 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcg 785
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 157 bits (79), Expect = 3e-35 Identities = 94/99 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttg 111 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 560 gcagtgcgtcagcttcatcgccttcaggccaccaggttg 598
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 683 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 742 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 743 gcagtgcgtcagcttcatcgcctataggccaccgggttgcga 784
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 487 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 546 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 547 gcagtgcgtcagcttcatcgcctttaggccaccgggttgcga 588
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||| || || |||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcga 602
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||||||||||||| || || |||||| |||||||||||||||||||||| ||||| Sbjct: 501 caagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 560 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 561 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcga 602
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 507 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgtcaggt 566 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 567 gcagtgcgtcagcttcatcgcctttaggccaccgggttgcga 608
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||| ||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtactctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 560 gcagtgcgtcagcttcatcgccttcaggccaccaggttgcga 601
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||| ||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggctttgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 560 gcagtgcgtcagcttcagcgccttcaggccaccgggttgcga 601
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 560 gcagtgcgtcagtttcatcgccttcaggccaccaggttgcga 601
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 155 bits (78), Expect = 1e-34 Identities = 96/102 (94%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||| Sbjct: 500 caagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccaggt 559 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 560 gcagtgcgtcagtttcatcgccttcaggccaccaggttgcga 601
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 151 bits (76), Expect = 2e-33 Identities = 110/122 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| ||||||||||||||||| |||| ||||| Sbjct: 475 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacatgcgccaggt 534 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 |||||||||||||||||| |||||||||||||| | ||||| || |||||||||||||| Sbjct: 535 gcagtgcgtcagcttcattgccttcaggccaccangctgcgaggaatccggcaaggcata 594 Query: 133 aa 134 || Sbjct: 595 aa 596
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 147 bits (74), Expect = 3e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||| Sbjct: 503 caagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccaggt 562 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 563 gcagtgcgtcagcttcatcgcctttaggccaccaggttgcga 604
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 143 bits (72), Expect = 5e-31 Identities = 110/123 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||| Sbjct: 428 caagaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggt 487 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcata 132 ||||||||||||||||||||| |||| |||||| || ||| | ||||| ||||||||||| Sbjct: 488 gcagtgcgtcagcttcatcgctttcaagccaccaggctgccaggagtcgggcaaggcata 547 Query: 133 aac 135 ||| Sbjct: 548 aac 550
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 139 bits (70), Expect = 7e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||| Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 139 bits (70), Expect = 7e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||| Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 139 bits (70), Expect = 7e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||| Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 139 bits (70), Expect = 7e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||| ||||| ||| |||| ||||| Sbjct: 680 caagaaggagtaccctgacgcctatgtccgcatcatcggtttcgataacttgcgtcaggt 739 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 740 gcagtgcgtcagcttcatcgccttcaagccaccgggttgcga 781
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 131 bits (66), Expect = 2e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 127 bits (64), Expect = 3e-26 Identities = 99/111 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 475 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 534 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccgg 123 |||||||||||||||||||||||||| |||||| || ||||| || ||||| Sbjct: 535 gcagtgcgtcagcttcatcgccttcaagccaccaggctgcgaggaatccgg 585
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 123 bits (62), Expect = 4e-25 Identities = 92/102 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 489 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 548 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| |||||| || ||||| Sbjct: 549 gcagtgcgtcagcttcatcgccttcaagccaccaggctgcga 590
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 123 bits (62), Expect = 4e-25 Identities = 92/102 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 483 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 542 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| |||||| || ||||| Sbjct: 543 gcagtgcgtcagcttcatcgccttcaagccaccaggctgcga 584
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 123 bits (62), Expect = 4e-25 Identities = 92/102 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||| Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||| ||||||||||||||||||| |||||| || ||||| Sbjct: 453 gcagtgtgtcagcttcatcgccttcaagccaccaggctgcga 494
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 123 bits (62), Expect = 4e-25 Identities = 92/102 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||| ||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgtgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 123 bits (62), Expect = 4e-25 Identities = 92/102 (90%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || || || |||||||||||||||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 121 bits (61), Expect = 2e-24 Identities = 105/120 (87%) Strand = Plus / Plus Query: 16 gaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgca 75 |||||||||||||||| | || ||| |||||||| ||||||||| |||| |||||||| Sbjct: 457 gaaggagtaccctgacccctattgccgcatcatcggattcgacaacatgcgtcaggtgca 516 Query: 76 gtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggcataaac 135 || ||||||||||||||||| || ||||||||| ||||| |||||||||||||| ||||| Sbjct: 517 gtccgtcagcttcatcgcctccaagccaccgggctgcgaggagtccggcaaggcctaaac 576
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 121 bits (61), Expect = 2e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||||||||||||| || || ||||| ||||||| ||||||||| |||| |||||| Sbjct: 466 aagaaggagtaccctgatgcgtatgtccgcgtcatcggtttcgacaacatgcgccaggtg 525 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaaggc 129 || |||||||||||||| |||||||||||||| || ||||| || ||||||||||| Sbjct: 526 caatgcgtcagcttcattgccttcaggccaccaggctgcgaggaatccggcaaggc 581
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 121 bits (61), Expect = 2e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 |||||||||||||||||||| || ||||| |||||||| ||||||||| | || |||||| Sbjct: 487 aagaaggagtaccctgacgcctatgtccgcatcatcggtttcgacaacatccgtcaggtg 546 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||||||| |||||| || ||||| Sbjct: 547 cagtgcgtcagcttcatcgccttcaagccaccaggctgcga 587
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 119 bits (60), Expect = 7e-24 Identities = 98/111 (88%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || || || |||||||||||||||||| | || || || Sbjct: 509 caagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagt 568 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccgg 123 ||||||||||||||||||||| |||| ||||||||| ||||| || ||||| Sbjct: 569 gcagtgcgtcagcttcatcgcattcaagccaccgggctgcgaggaatccgg 619
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||| |||||||||||||| || ||||| |||||||||||||||||| | || || || Sbjct: 393 caagaaagagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagtttcatcgccttcaagccaccgggctgcga 494
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||| Sbjct: 393 caagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||| Sbjct: 393 caagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||| Sbjct: 393 caagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccaccgggctgcga 494
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 111 bits (56), Expect = 2e-21 Identities = 97/111 (87%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || || || |||||||||||||||||| | || || || Sbjct: 482 caagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgccaagt 541 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccgg 123 ||||||||||||||||||||| |||| |||||| || ||||| || ||||| Sbjct: 542 gcagtgcgtcagcttcatcgcattcaagccaccaggctgcgaggaatccgg 592
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || || || |||||||||||||||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||| |||| |||||| || ||||| Sbjct: 453 gcagtgcgtcagcttcatcgcattcaagccaccaggctgcga 494
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || ||||| ||||||||||| |||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttagacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 |||||| ||||||||||||||||||| |||||| || ||||| Sbjct: 453 gcagtgtgtcagcttcatcgccttcaagccaccaggctgcga 494
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || || || |||||||||||||||||| | || || || Sbjct: 393 caagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagt 452 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcga 114 ||||||||||||||||||||| |||| |||||| || ||||| Sbjct: 453 gcagtgcgtcagcttcatcgcattcaagccaccaggctgcga 494
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 105 bits (53), Expect = 1e-19 Identities = 64/68 (94%) Strand = Plus / Plus Query: 68 caggtgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtccggcaag 127 ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||| Sbjct: 2 caggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaag 61 Query: 128 gcataaac 135 || ||||| Sbjct: 62 gcctaaac 69
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 101 bits (51), Expect = 2e-18 Identities = 66/71 (92%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 ||||||||||||||||||||| || |||||| |||||||||| ||||||||||| ||||| Sbjct: 668 caagaaggagtaccctgacgcctatgtccgtgtcatcggctttgacaacctgcgccaggt 727 Query: 73 gcagtgcgtca 83 ||||||||||| Sbjct: 728 gcagtgcgtca 738
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 10079890 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 10079831 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 10079830 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 10079783 Score = 75.8 bits (38), Expect = 9e-11 Identities = 70/81 (86%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 103 |||||||||||||||||| | |||||||||||| | ||||||||||||| || ||| Sbjct: 11276885 atcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagccc 11276944 Query: 104 ccgggttgcgangagtccggc 124 ||||||||||| ||||||||| Sbjct: 11276945 ccgggttgcgaggagtccggc 11276965 Score = 71.9 bits (36), Expect = 1e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 97 |||||||||||||||||||||||| | |||||||||||| | ||||||||||||| | Sbjct: 11262216 gtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctac 11262275 Query: 98 aggccaccgggttgcgangagtc 120 | ||| || |||||||| ||||| Sbjct: 11262276 aagcccccaggttgcgaggagtc 11262298 Score = 56.0 bits (28), Expect = 8e-05 Identities = 87/107 (81%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||||| Sbjct: 11320002 aagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtg 11320061 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| ||||||||||||| | | ||||||||||||||| ||||| Sbjct: 11320062 cagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 11320108 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 48 tcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||| |||||| | |||| ||||||||| | ||||||||||||| Sbjct: 11266837 tcggctttgacaacgtcaggcatgtgcagtgcattagcttcatcgcct 11266884
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 618 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 677 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 678 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 725
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 464 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 523 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 524 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 571
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 465 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 524 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 525 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 572
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 467 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 526 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 527 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 574
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Minus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 10079775 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 10079716 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 10079715 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 10079668 Score = 75.8 bits (38), Expect = 9e-11 Identities = 70/81 (86%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 103 |||||||||||||||||| | |||||||||||| | ||||||||||||| || ||| Sbjct: 11276556 atcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagccc 11276615 Query: 104 ccgggttgcgangagtccggc 124 ||||||||||| ||||||||| Sbjct: 11276616 ccgggttgcgaggagtccggc 11276636 Score = 71.9 bits (36), Expect = 1e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 97 |||||||||||||||||||||||| | |||||||||||| | ||||||||||||| | Sbjct: 11261887 gtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctac 11261946 Query: 98 aggccaccgggttgcgangagtc 120 | ||| || |||||||| ||||| Sbjct: 11261947 aagcccccaggttgcgaggagtc 11261969 Score = 56.0 bits (28), Expect = 8e-05 Identities = 87/107 (81%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||||| Sbjct: 11319673 aagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtg 11319732 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| ||||||||||||| | | ||||||||||||||| ||||| Sbjct: 11319733 cagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 11319779 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 48 tcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||| |||||| | |||| ||||||||| | ||||||||||||| Sbjct: 11266508 tcggctttgacaacgtcaggcatgtgcagtgcattagcttcatcgcct 11266555
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 82731 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 82790 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 82791 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 82838
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 490 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 549 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 550 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaagagtc 597
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 442 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggt 501 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 502 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 549
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/108 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 462 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 521 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 522 gcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 569
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 85.7 bits (43), Expect = 9e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| ||||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 754 caagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggt 813 Query: 73 gcagtgcgtcagcttcatcgcct 95 |||| | ||||||||||||||| Sbjct: 814 gcagctcatcagcttcatcgcct 836
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 81.8 bits (41), Expect = 1e-12 Identities = 91/108 (84%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| | ||||||| || | ||||||||||||||||||||||||| | ||||||| Sbjct: 453 caagaaggcgaaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggt 512 Query: 73 gcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| | |||| |||||||||| || ||| ||||| ||||| ||||| Sbjct: 513 gcagctcatcagtttcatcgcctacaagcccccgggctgcgaggagtc 560
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 75.8 bits (38), Expect = 9e-11 Identities = 70/81 (86%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 103 |||||||||||||||||| | |||||||||||| | ||||||||||||| || ||| Sbjct: 507 atcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagccc 566 Query: 104 ccgggttgcgangagtccggc 124 ||||||||||| ||||||||| Sbjct: 567 ccgggttgcgaggagtccggc 587
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 75.8 bits (38), Expect = 9e-11 Identities = 70/81 (86%) Strand = Plus / Minus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 103 |||||||||||||||||| | |||||||||||| | ||||||||||||| || ||| Sbjct: 95169 atcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagccc 95110 Query: 104 ccgggttgcgangagtccggc 124 ||||||||||| ||||||||| Sbjct: 95109 ccgggttgcgaggagtccggc 95089 Score = 71.9 bits (36), Expect = 1e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 97 |||||||||||||||||||||||| | |||||||||||| | ||||||||||||| | Sbjct: 109838 gtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctac 109779 Query: 98 aggccaccgggttgcgangagtc 120 | ||| || |||||||| ||||| Sbjct: 109778 aagcccccaggttgcgaggagtc 109756 Score = 56.0 bits (28), Expect = 8e-05 Identities = 87/107 (81%) Strand = Plus / Minus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||||| Sbjct: 52052 aagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtg 51993 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| ||||||||||||| | | ||||||||||||||| ||||| Sbjct: 51992 cagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 51946 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Minus Query: 48 tcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||| |||||| | |||| ||||||||| | ||||||||||||| Sbjct: 105217 tcggctttgacaacgtcaggcatgtgcagtgcattagcttcatcgcct 105170
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 71.9 bits (36), Expect = 1e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 97 |||||||||||||||||||||||| | |||||||||||| | ||||||||||||| | Sbjct: 484 gtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctac 543 Query: 98 aggccaccgggttgcgangagtc 120 | ||| || |||||||| ||||| Sbjct: 544 aagcccccaggttgcgaggagtc 566
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 71.9 bits (36), Expect = 1e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 97 |||||||||||||||||||||||| | |||||||||||| | ||||||||||||| | Sbjct: 501 gtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctac 560 Query: 98 aggccaccgggttgcgangagtc 120 | ||| || |||||||| ||||| Sbjct: 561 aagcccccaggttgcgaggagtc 583
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 71.9 bits (36), Expect = 1e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 |||||||||||||||| |||| | | |||| |||||||||||||||||| || |||| Sbjct: 508 gcaagaaggagtacccccacgccttcatccgcatcatcggcttcgacaacaaccgccagg 567 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||||||| |||| |||||||||| Sbjct: 568 tgcagtgcatcagtttcatcgcct 591
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 69.9 bits (35), Expect = 6e-09 Identities = 70/82 (85%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttca 98 ||||||||||||||||||||||| | |||||||||||| | ||||||||||||| || Sbjct: 500 tccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctaca 559 Query: 99 ggccaccgggttgcgangagtc 120 ||| || |||||||| ||||| Sbjct: 560 agcccccaggttgcgaggagtc 581
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 492 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 548
>gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxylase small subunit-like gene, complete sequence; plastid Length = 549 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 37 cgtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 ||||||||||||||| ||||||||| | || || ||||||||| ||||||||||||| Sbjct: 467 cgtccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgc 523
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 992 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 1048
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 1012 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 1068
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 1663 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 1719
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 63.9 bits (32), Expect = 3e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatc 91 |||| |||||| || ||||| ||||||||| | || || ||||||||||||||||||||| Sbjct: 511 gctttcgtccgcattatcggattcgacaacgtccgtcaagtgcagtgcgtcagcttcatc 570 Query: 92 gcct 95 |||| Sbjct: 571 gcct 574
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 45 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 753 tcatcggcttcgacaacgtcaggcagacgcagtgcgtcagcttcatcgcct 803
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| |||||||| || | | ||||||||||||| ||||||||| |||| || || Sbjct: 469 caagaaggcttaccctgaggccttcatccgtatcatcggattcgacaacgtgcgtcaagt 528 Query: 73 gcagtgcgtcagcttcatcgcct 95 |||||| |||| |||||||||| Sbjct: 529 acagtgcatcagtttcatcgcct 551
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| |||||||| || | |||||||||||||||||||||||| | ||||||| Sbjct: 460 caagaaggcctaccctgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggt 519 Query: 73 gcagt 77 ||||| Sbjct: 520 gcagt 524
>gb|U39858.1|GTU39858 Glycine tabacina ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1084 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| | || || ||||| ||| ||||||||||||||| Sbjct: 1007 tccgtatcatcggattcgacaacgttcgccaagtgcaatgcatcagcttcatcgcct 1063
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| ||||||||| |||| || ||||| || ||||| |||||||||| Sbjct: 2584 tccgtatcatcggattcgacaacgtgcgtcaagtgcaatgtgtcagtttcatcgcct 2640
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 56.0 bits (28), Expect = 8e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 448 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaag 507 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 508 tgcaatgcgtcagtttcattgcct 531
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 56.0 bits (28), Expect = 8e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 293 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaag 352 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 353 tgcaatgcgtcagtttcattgcct 376
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 56.0 bits (28), Expect = 8e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 293 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaag 352 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 353 tgcaatgcgtcagtttcattgcct 376
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 56.0 bits (28), Expect = 8e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 293 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaag 352 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 353 tgcaatgcgtcagtttcattgcct 376
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 45 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 104 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 1090 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 1149 Query: 105 cggg 108 |||| Sbjct: 1150 cggg 1153
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 472 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 523
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 551 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 602
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 549 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 600
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 527 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 578
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 570 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 621
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 546 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 597
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 56.0 bits (28), Expect = 8e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 457 atcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 508
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 45 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 104 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 564 Query: 105 cggg 108 |||| Sbjct: 565 cggg 568
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 56.0 bits (28), Expect = 8e-05 Identities = 87/107 (81%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||||| Sbjct: 473 aagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtg 532 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| ||||||||||||| | | ||||||||||||||| ||||| Sbjct: 533 cagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 579
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 56.0 bits (28), Expect = 8e-05 Identities = 87/107 (81%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||||| Sbjct: 475 aagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcaggtg 534 Query: 74 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||| ||||||||||||| | | ||||||||||||||| ||||| Sbjct: 535 cagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 581
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 45 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 104 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 625 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 684 Query: 105 cggg 108 |||| Sbjct: 685 cggg 688
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 56.0 bits (28), Expect = 8e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 45 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 104 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 564 Query: 105 cggg 108 |||| Sbjct: 565 cggg 568
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 56.0 bits (28), Expect = 8e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 40 ccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||||| ||||||||| |||| || || |||||| |||| |||||||||| Sbjct: 1978 ccgtatcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcct 2033
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 54.0 bits (27), Expect = 3e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 293 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaag 352 Query: 72 tgcagtgcgtcagcttcat 90 |||| |||||||| ||||| Sbjct: 353 tgcaatgcgtcagtttcat 371
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| |||||||| || | | ||||||||||||| ||||||||| |||| || || Sbjct: 477 caagaaggcttaccctgaggccttcatccgtatcatcggattcgacaacgtgcgtcaagt 536 Query: 73 gcagtgcgtcagcttcatcgcct 95 ||||| |||| |||||||||| Sbjct: 537 acagtgtatcagtttcatcgcct 559
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| |||||||| || | | ||||||||||||| ||||||||| |||| || || Sbjct: 1252 caagaaggcttaccctgaggccttcatccgtatcatcggattcgacaacgtgcgtcaagt 1311 Query: 73 gcagtgcgtcagcttcatcgcct 95 ||||| |||| |||||||||| Sbjct: 1312 ccagtgtatcagtttcatcgcct 1334
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 54.0 bits (27), Expect = 3e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 13 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 72 |||||||| |||||||| || | | ||||||||||||| ||||||||| |||| || || Sbjct: 2438 caagaaggcttaccctgaggccttcatccgtatcatcggattcgacaacgtgcgtcaagt 2497 Query: 73 gcagtgcgtcagcttcatcgcct 95 ||||| |||| |||||||||| Sbjct: 2498 acagtgtatcagtttcatcgcct 2520
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 52.0 bits (26), Expect = 0.001 Identities = 77/94 (81%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 |||||||||||||||| | || ||| |||| || || || ||||||||| | || || | Sbjct: 483 gcaagaaggagtacccaaatgcatacatccgaattattggattcgacaacgtccgtcaag 542 Query: 72 tgcagtgcgtcagcttcatcgccttcaggccacc 105 |||||||| |||| ||||| ||||||| |||||| Sbjct: 543 tgcagtgcatcagtttcattgccttcaagccacc 576
>gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-3) mRNA, complete cds Length = 765 Score = 52.0 bits (26), Expect = 0.001 Identities = 68/82 (82%) Strand = Plus / Plus Query: 14 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 73 ||||||| |||||||| || | | ||||||||||||| ||||||||| |||| || || Sbjct: 461 aagaaggcttaccctgaggccttcatccgtatcatcggattcgacaacgtgcgtcaagtc 520 Query: 74 cagtgcgtcagcttcatcgcct 95 ||||| |||| |||||||||| Sbjct: 521 cagtgtatcagtttcatcgcct 542
>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small subunit Length = 1601 Score = 50.1 bits (25), Expect = 0.005 Identities = 49/57 (85%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 |||||||||| || || |||||| | || || ||||||||| ||||||||||||||| Sbjct: 1229 tccgtatcattggatttgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 1285
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 50.1 bits (25), Expect = 0.005 Identities = 40/45 (88%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttc 88 |||||||||||||||||| ||| || ||||||||| |||||||| Sbjct: 506 atcatcggcttcgacaacacgcgccaagtgcagtgcatcagcttc 550
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 48.1 bits (24), Expect = 0.021 Identities = 69/84 (82%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| || |||||| | || || | Sbjct: 472 gcaagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaag 531 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 532 tgcaatgcgtcagtttcattgcct 555
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 1052 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 1107
>gb|AF044397.1|AF044397 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R3 (rbcS-R3) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 677 Score = 48.1 bits (24), Expect = 0.021 Identities = 69/84 (82%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| || |||||| | || || | Sbjct: 299 gcaagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaag 358 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||||||| |||| ||||| |||| Sbjct: 359 tgcagtgcatcagtttcattgcct 382
>emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphosp[hate carboxylase/oxygenase small subunit Length = 1341 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 942 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 997
>emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 1054 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 920 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 975
>emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bisphosphate carboxylae/oxygenase small subunit Length = 1520 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 1022 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 1077
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 48.1 bits (24), Expect = 0.021 Identities = 69/84 (82%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| || |||||| | || || | Sbjct: 444 gcaagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaag 503 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| |||||||| ||||| |||| Sbjct: 504 tgcaatgcgtcagtttcattgcct 527
>emb|X69762.1|STRBCS2C S.tuberosum rbcS2c gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1386 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 ||||||||||||| ||||||||| | || || ||||||||| |||| ||||| Sbjct: 1069 tccgtatcatcggattcgacaacgttcgtcaagtgcagtgcatcagtttcat 1120
>emb|X69761.1|STRBCS2B S.tuberosum rbcS2b gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1703 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 ||||||||||||| ||||||||| | || || ||||||||| |||| ||||| Sbjct: 1370 tccgtatcatcggattcgacaacgttcgtcaagtgcagtgcatcagtttcat 1421
>emb|X69760.1|STRBCS2 S.tuberosum rbcS2 gene for ribulose-(1,5)-bisphosphate carboxylase/oxygenase small subunit Length = 1629 Score = 48.1 bits (24), Expect = 0.021 Identities = 45/52 (86%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 ||||||||||||| ||||||||| | || || ||||||||| |||| ||||| Sbjct: 1270 tccgtatcatcggattcgacaacgttcgtcaagtgcagtgcatcagtttcat 1321
>gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosphate carboxylase/oxygenase (RBCS) small subunit gene, clone Rbcs-3A Length = 1027 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 780 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 835
>dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 4124 Score = 48.1 bits (24), Expect = 0.021 Identities = 48/56 (85%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 |||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 3990 gtccgtatcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgc 4045
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 ||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 521 tccgtatcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgc 575
>gb|AC092642.2| Homo sapiens BAC clone RP11-391P1 from 2, complete sequence Length = 152251 Score = 46.1 bits (23), Expect = 0.081 Identities = 23/23 (100%) Strand = Plus / Minus Query: 268 gcatatatgcatatgtaaattct 290 ||||||||||||||||||||||| Sbjct: 124198 gcatatatgcatatgtaaattct 124176
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 1879 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 1925
>emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small subunit (rbcs1 gene) Length = 934 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 525 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 571
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 ||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 525 tccgtatcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgc 579
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 46.1 bits (23), Expect = 0.081 Identities = 41/47 (87%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 90 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 46.1 bits (23), Expect = 0.081 Identities = 65/79 (82%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| ||||||||| | || || | Sbjct: 437 gcaagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgtccgtcaag 496 Query: 72 tgcagtgcgtcagcttcat 90 |||| ||| |||| ||||| Sbjct: 497 tgcaatgcatcagtttcat 515
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 46.1 bits (23), Expect = 0.081 Identities = 47/55 (85%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 93 ||||||||||||| |||||||| | || || ||||||||| |||| |||||||| Sbjct: 489 tccgtatcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgc 543
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 103 |||||||||||||||||| | || || || |||||| |||| ||||| |||| || |||| Sbjct: 499 atcatcggcttcgacaacgttcgccaagtccagtgcatcagtttcattgcctccaagcca 558 Query: 104 cc 105 || Sbjct: 559 cc 560
>gb|AF294982.1| Binary vector pINDEX3, complete sequence Length = 12942 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 3327 gctttcgtccgtatcatcggtttcgacaac 3356
>gb|AF294981.1| Binary vector pINDEX4, complete sequence Length = 12072 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 2457 gctttcgtccgtatcatcggtttcgacaac 2486
>gb|AF294980.1| Binary vector pINDEX2, complete sequence Length = 14230 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 4615 gctttcgtccgtatcatcggtttcgacaac 4644
>gb|AF294979.1| Binary vector pINDEX1, complete sequence Length = 14203 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 4588 gctttcgtccgtatcatcggtttcgacaac 4617
>gb|AF330636.1|AF330636 Plant DNA excision vector pX6-GFP, complete sequence Length = 14103 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 6840 gctttcgtccgtatcatcggtttcgacaac 6869
>gb|AF309825.2|AF309825 Plant expression vector pER8, complete plasmid sequence Length = 11522 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 4259 gctttcgtccgtatcatcggtttcgacaac 4288
>emb|X04333.1|PSRBCS3A Pea rbcS-3A gene for ribulose 1.5-bisphosphate carboxylase (RBC) small subunit Length = 2061 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 1449 gctttcgtccgtatcatcggtttcgacaac 1478
>dbj|AB086434.1| Synthetic construct gene trap vector yy323, complete sequence Length = 10212 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 2127 gctttcgtccgtatcatcggtttcgacaac 2156
>dbj|AB086433.1| Synthetic construct gene trap vector yy322, complete sequence Length = 10856 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 32 gcttacgtccgtatcatcggcttcgacaac 61 |||| ||||||||||||||| ||||||||| Sbjct: 2127 gctttcgtccgtatcatcggtttcgacaac 2156
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 44.1 bits (22), Expect = 0.32 Identities = 67/82 (81%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| || |||||| | || || | Sbjct: 466 gcaagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgttcgtcaag 525 Query: 72 tgcagtgcgtcagcttcatcgc 93 | |||||| |||| |||||||| Sbjct: 526 ttcagtgcatcagtttcatcgc 547
>ref|XM_473688.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1155 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctg 64 ||||||||||||||||||||| Sbjct: 349 atcatcggcttcgacaacctg 369
>gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, complete cds Length = 769 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| || |||||| | || || |||||||| |||| |||||||||| Sbjct: 505 tccgtatcatcggatttgacaacgttcgtcaagtgcagtgtatcagtttcatcgcct 561
>gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, partial cds; nuclear gene for chloroplast product Length = 345 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 gtgcagtgcgtcagcttcatcgcct 95 ||||||||| ||||||||||||||| Sbjct: 15 gtgcagtgcatcagcttcatcgcct 39
>emb|AL606658.5|OSJN00098 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016D16, complete sequence Length = 133113 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctg 64 ||||||||||||||||||||| Sbjct: 31993 atcatcggcttcgacaacctg 32013
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctg 64 ||||||||||||||||||||| Sbjct: 29644773 atcatcggcttcgacaacctg 29644793
>dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA for RuBisCO small subunit Length = 306 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| |||||||| | || || || |||||| |||| |||||||||| Sbjct: 141 tccgtatcatcggattcgacaatgtccgtcaagttcagtgcatcagtttcatcgcct 197
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 catcggcttcgacaacctgcg 66 ||||||||||||||||||||| Sbjct: 2865281 catcggcttcgacaacctgcg 2865301
>dbj|AK060241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-F02, full insert sequence Length = 1599 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 atcatcggcttcgacaacctg 64 ||||||||||||||||||||| Sbjct: 600 atcatcggcttcgacaacctg 620
>gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds Length = 801 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 39 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 95 ||||||||||||| || |||||| | || || |||||||| |||| |||||||||| Sbjct: 526 tccgtatcatcggatttgacaacgttcgtcaagtgcagtgtatcagtttcatcgcct 582
>emb|AL772245.7| Mouse DNA sequence from clone RP23-332K6 on chromosome 4, complete sequence Length = 70508 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gcatatatgcatatgtaaatt 288 ||||||||||||||||||||| Sbjct: 46393 gcatatatgcatatgtaaatt 46373
>emb|AL596456.15| Mouse DNA sequence from clone RP23-353K20 on chromosome 11, complete sequence Length = 228428 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 269 catatatgcatatgtaaattc 289 ||||||||||||||||||||| Sbjct: 158764 catatatgcatatgtaaattc 158744
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gcatatatgcatatgtaaat 287 |||||||||||||||||||| Sbjct: 85748 gcatatatgcatatgtaaat 85767
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 gcatatatgcatatgtaaat 287 |||||||||||||||||||| Sbjct: 152885 gcatatatgcatatgtaaat 152904
>emb|AL139404.9| Human DNA sequence from clone RP11-376D11 on chromosome 10 Contains the 5' end of the SSH3BP gene for spectrin SH3 domain binding protein 1, complete sequence Length = 122913 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cttctctatgatctgtgttt 247 |||||||||||||||||||| Sbjct: 101619 cttctctatgatctgtgttt 101638
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaac 61 |||||||||||||| ||||||||| Sbjct: 1641 gtccgtatcatcggattcgacaac 1664
>emb|AL672217.6| Zebrafish DNA sequence from clone BUSM1-72B14 Contains the gdf8 gene for growth differentiation factor 8, a novel gene similar to PSML1 (postmeiotic segregation increased 1-like protein), two novel genes, the 3' part of a novel gene, a novel glycoprotease, a novel gene and two CpG islands, complete sequence Length = 117322 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tacacatatacaacacctgt 319 |||||||||||||||||||| Sbjct: 83400 tacacatatacaacacctgt 83381
>emb|CR318584.8| Zebrafish DNA sequence from clone CH211-123F21 in linkage group 13, complete sequence Length = 138029 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tacacatatacaacacctgt 319 |||||||||||||||||||| Sbjct: 119147 tacacatatacaacacctgt 119128
>emb|CR382380.5| Zebrafish DNA sequence from clone DKEY-112M3 in linkage group 14, complete sequence Length = 84200 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 ataattttcttctctatgat 239 |||||||||||||||||||| Sbjct: 30560 ataattttcttctctatgat 30579
>gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 756 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgaca 59 |||||||||||||||| |||| | | |||||||||| || ||||||| Sbjct: 471 gcaagaaggagtaccccaacgccttcatccgtatcattggattcgaca 518
>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence Length = 173729 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ttgtggagcatatatgcatatgta 284 |||||||| ||||||||||||||| Sbjct: 56427 ttgtggagaatatatgcatatgta 56450
>gb|AC087330.6| Mus Musculus Strain C57BL6/J chromosome 5 BAC, RP23-3M10, complete sequence Length = 206093 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggcctacacatatacaacac 315 |||||||||||||||||||| Sbjct: 91436 ggcctacacatatacaacac 91455
>dbj|AK084636.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330024G12 product:unclassifiable, full insert sequence Length = 2836 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggcctacacatatacaacac 315 |||||||||||||||||||| Sbjct: 1117 ggcctacacatatacaacac 1136
>emb|AL115855.1|CNS01CQF Botrytis cinerea strain T4 cDNA library Length = 696 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ttcggcacgaggcaagaagg 20 |||||||||||||||||||| Sbjct: 320 ttcggcacgaggcaagaagg 301
>emb|BX649596.8| Zebrafish DNA sequence from clone CH211-69P4 in linkage group 14, complete sequence Length = 181055 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gagcatatatgcatatgtaa 285 |||||||||||||||||||| Sbjct: 42651 gagcatatatgcatatgtaa 42670
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 40.1 bits (20), Expect = 5.0 Identities = 68/84 (80%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 71 ||||||||||||||||| | || | ||||||||||||| || |||||| | || || | Sbjct: 293 gcaagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaag 352 Query: 72 tgcagtgcgtcagcttcatcgcct 95 |||| ||| |||| ||||| |||| Sbjct: 353 tgcaatgcatcagtttcattgcct 376
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 gactagagcataattttcttctct 234 ||||||| |||||||||||||||| Sbjct: 134581 gactagaacataattttcttctct 134558
>gb|AC154447.2| Mus musculus BAC clone RP23-185B14 from chromosome 16, complete sequence Length = 212505 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 atatttataatatacaacaa 342 |||||||||||||||||||| Sbjct: 94569 atatttataatatacaacaa 94550
>emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphosphate carboxylase Length = 751 Score = 40.1 bits (20), Expect = 5.0 Identities = 41/48 (85%) Strand = Plus / Plus Query: 12 gcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgaca 59 |||||||||||||||| |||| | | |||||||||| || ||||||| Sbjct: 469 gcaagaaggagtaccccaacgccttcatccgtatcattggattcgaca 516
>emb|BX465837.11| Zebrafish DNA sequence from clone DKEY-27C15 in linkage group 19, complete sequence Length = 206154 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ttcacttttgtccatgactc 202 |||||||||||||||||||| Sbjct: 165538 ttcacttttgtccatgactc 165557
>emb|AL591593.11| Zebrafish DNA sequence from clone BUSM1-211O13, complete sequence Length = 121251 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tacacatatacaacacctgt 319 |||||||||||||||||||| Sbjct: 6560 tacacatatacaacacctgt 6541
>dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-F10, full insert sequence Length = 418 Score = 40.1 bits (20), Expect = 5.0 Identities = 46/55 (83%) Strand = Plus / Plus Query: 66 ggcaggtgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgangagtc 120 |||||||||||| | ||||||||||||| || ||| || |||||||| ||||| Sbjct: 7 ggcaggtgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 61
>emb|AL807791.8| Mouse DNA sequence from clone RP23-319K12 on chromosome X, complete sequence Length = 95805 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 catatttataatatacaaca 341 |||||||||||||||||||| Sbjct: 39833 catatttataatatacaaca 39852
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cagcttcatcgccttcaggc 101 |||||||||||||||||||| Sbjct: 2694143 cagcttcatcgccttcaggc 2694162
>emb|AL935140.6| Zebrafish DNA sequence from clone DKEYP-122E7 in linkage group 9, complete sequence Length = 83763 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cttcacttttgtccatgact 201 |||||||||||||||||||| Sbjct: 18433 cttcacttttgtccatgact 18452
>emb|X96847.1|MSRBCSK1A M.sativa Rbcsk-1A gene Length = 3180 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 gtccgtatcatcggcttcgacaac 61 |||||||||||||| ||||||||| Sbjct: 2687 gtccgtatcatcggattcgacaac 2710 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,276,447 Number of Sequences: 3902068 Number of extensions: 3276447 Number of successful extensions: 71618 Number of sequences better than 10.0: 205 Number of HSP's better than 10.0 without gapping: 203 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 71273 Number of HSP's gapped (non-prelim): 323 length of query: 377 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 355 effective length of database: 17,147,199,772 effective search space: 6087255919060 effective search space used: 6087255919060 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
