Clone Name | baak0b03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB219969.1| Triticum aestivum WAP2 mRNA for aspartic proteinase, complete cds Length = 1560 Score = 779 bits (393), Expect = 0.0 Identities = 451/469 (96%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 12 tgtcagcaacgggattgaatccgttgtcggtaaagaaaatgttggctcggatctcatgtg 71 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1078 tgtcagcaacgggattgaatccgttgtcggtaaagaaaatgttggctcggatgttatgtg 1137 Query: 72 cacagcctgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaa 131 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1138 cacagcctgtgagatggctgttgtgtggatagagaaccagctccgtgaaaacaaaacaaa 1197 Query: 132 ggagctgatattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggaga 191 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1198 ggagctgatattgcaatatgctaaccagctgtgtgagcgtctaccgagcccaaatggaga 1257 Query: 192 gtcaacagtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaa 251 |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||| Sbjct: 1258 gtcaacagtcagctgccatgagatgtcaaagatgccgaatcttgctttcaccatcgcaag 1317 Query: 252 caagactttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagac 311 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 1318 caagactttcgtgctaacaccagagcagtacgttgtgaaactggagcaatcagggcaaac 1377 Query: 312 cgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggat 371 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1378 cgtctgcatcagtgggttcatggcattcgacataccgcccccacgtggtcctctctggat 1437 Query: 372 tctcggggatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggacagaa 431 ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1438 tcttggggatgtcttcatgggcgcttaccaca-ccgtgttcgacttcggcaaggacagaa 1496 Query: 432 tcgggttcgcagaatcggcttgaggagtcgagagcactgtgacgtttcc 480 ||||||| || ||||||||||||||||||||||||||||||| |||||| Sbjct: 1497 tcgggtttgcggaatcggcttgaggagtcgagagcactgtgatgtttcc 1545
>ref|XM_475576.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 355 bits (179), Expect = 9e-95 Identities = 318/363 (87%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctg 138 ||||||||||||||||||||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1117 tgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaaggagctg 1176 Query: 139 atattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaaca 198 |||||| | |||||||| ||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 1177 atattgaattatgctaatcagttatgtgagcgtctaccaagccccaatggagaatcaact 1236 Query: 199 gtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagact 258 |||||||||||| | || || |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 1237 gtcagctgccatcaaatctcgaagatgcctaatcttgcattcaccattgcaaacaagaca 1296 Query: 259 ttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgc 318 || | || ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 1297 tttattcttacaccagagcagtacatcgtgaaactggagcaaggagggcaaaccgtctgc 1356 Query: 319 atcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggg 378 ||||| ||||||||||| ||||||||||| || |||||||||||||| |||||||| || Sbjct: 1357 atcagcgggttcatggcgttcgacatacctccaccacgcggtcctctttggattcttgga 1416 Query: 379 gatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggacagaatcgggtt 438 |||||||||||||| | ||| || | | || |||||||||||||| ||||| |||||||| Sbjct: 1417 gatgtcttcatgggtgcttatcata-cggttttcgacttcggcaaagacaggatcgggtt 1475 Query: 439 cgc 441 ||| Sbjct: 1476 cgc 1478
>dbj|AK065206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F13, full insert sequence Length = 1900 Score = 355 bits (179), Expect = 9e-95 Identities = 318/363 (87%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctg 138 ||||||||||||||||||||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1269 tgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaaggagctg 1328 Query: 139 atattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaaca 198 |||||| | |||||||| ||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 1329 atattgaattatgctaatcagttatgtgagcgtctaccaagccccaatggagaatcaact 1388 Query: 199 gtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagact 258 |||||||||||| | || || |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 1389 gtcagctgccatcaaatctcgaagatgcctaatcttgcattcaccattgcaaacaagaca 1448 Query: 259 ttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgc 318 || | || ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 1449 tttattcttacaccagagcagtacatcgtgaaactggagcaaggagggcaaaccgtctgc 1508 Query: 319 atcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggg 378 ||||| ||||||||||| ||||||||||| || |||||||||||||| |||||||| || Sbjct: 1509 atcagcgggttcatggcgttcgacatacctccaccacgcggtcctctttggattcttgga 1568 Query: 379 gatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggacagaatcgggtt 438 |||||||||||||| | ||| || | | || |||||||||||||| ||||| |||||||| Sbjct: 1569 gatgtcttcatgggtgcttatcata-cggttttcgacttcggcaaagacaggatcgggtt 1627 Query: 439 cgc 441 ||| Sbjct: 1628 cgc 1630
>dbj|D12777.1|RICASPPRO Oryza sativa (japonica cultivar-group) mRNA for aspartic proteinase, complete cds Length = 1774 Score = 355 bits (179), Expect = 9e-95 Identities = 318/363 (87%), Gaps = 1/363 (0%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctg 138 ||||||||||||||||||||||||||||||||||| || || || ||||| ||||||||| Sbjct: 1198 tgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaaggagctg 1257 Query: 139 atattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaaca 198 |||||| | |||||||| ||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 1258 atattgaattatgctaatcagttatgtgagcgtctaccaagccccaatggagaatcaact 1317 Query: 199 gtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagact 258 |||||||||||| | || || |||||||| |||||||| ||| |||| ||||||||||| Sbjct: 1318 gtcagctgccatcaaatctcgaagatgcctaatcttgcattcaccattgcaaacaagaca 1377 Query: 259 ttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgc 318 || | || ||||||||||||||||| ||||||||||||||| |||||| ||||||||| Sbjct: 1378 tttattcttacaccagagcagtacatcgtgaaactggagcaaggagggcaaaccgtctgc 1437 Query: 319 atcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggg 378 ||||| ||||||||||| ||||||||||| || |||||||||||||| |||||||| || Sbjct: 1438 atcagcgggttcatggcgttcgacatacctccaccacgcggtcctctttggattcttgga 1497 Query: 379 gatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggacagaatcgggtt 438 |||||||||||||| | ||| || | | || |||||||||||||| ||||| |||||||| Sbjct: 1498 gatgtcttcatgggtgcttatcata-cggttttcgacttcggcaaagacaggatcgggtt 1556 Query: 439 cgc 441 ||| Sbjct: 1557 cgc 1559
>gb|AY103665.1| Zea mays PCO108960 mRNA sequence Length = 1413 Score = 341 bits (172), Expect = 1e-90 Identities = 371/436 (85%), Gaps = 1/436 (0%) Strand = Plus / Plus Query: 12 tgtcagcaacgggattgaatccgttgtcggtaaagaaaatgttggctcggatctcatgtg 71 ||||||| | ||||||||||| || ||||| |||||||| | ||||| ||| ||||||| Sbjct: 682 tgtcagcgaggggattgaatctgtcgtcgggaaagaaaacctgggctcagatgtcatgtg 741 Query: 72 cacagcctgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaa 131 | | |||||| |||||||||| ||||||||||||||||||||||| || ||||| || || Sbjct: 742 ctcggcctgtcagatggctgtcgtgtggatagagaaccagctccgcgaaaacaagaccaa 801 Query: 132 ggagctgatattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggaga 191 |||||| ||| |||| || ||||||||||||||||||||||| || |||||||| ||||| Sbjct: 802 ggagctcatactgcagtacgctaaccagctgtgtgagcgtctgccgagccccaacggaga 861 Query: 192 gtcaacagtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaa 251 |||||||||||||||||| ||||| || |||||||| | ||||| ||| |||| ||||| Sbjct: 862 gtcaacagtcagctgccaggagatctccaagatgcccagccttgcgttcaccatcgcaaa 921 Query: 252 caagactttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagac 311 |||||| ||| |||||||| |||||||||||||||| ||||||||| ||| || || Sbjct: 922 caagaccttcaccctaacaccccagcagtacattgtgaagctggagcaaggaggccaaac 981 Query: 312 cgtctgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggat 371 |||||||||||||||||||||||| | ||| | || || || || |||||||||||||| Sbjct: 982 cgtctgcatcagtgggttcatggcgtatgacgtgccaccgccgcgtggtcctctctggat 1041 Query: 372 tctcggggatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggacagaa 431 ||| ||||| ||||||||||| | |||||||| | ||||||||||||||||| ||||| | Sbjct: 1042 tcttggggacgtcttcatgggagcttaccaca-cggtgttcgacttcggcaacgacagga 1100 Query: 432 tcgggttcgcagaatc 447 | || ||||| ||||| Sbjct: 1101 ttggcttcgcggaatc 1116
>gb|AY103982.1| Zea mays PCO140262 mRNA sequence Length = 1929 Score = 250 bits (126), Expect = 4e-63 Identities = 267/314 (85%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctg 138 ||||||||||||||||| |||||| |||| ||||||||||| ||||| ||||| || || Sbjct: 1281 tgtgagatggctgttgtctggatacagaatcagctccgtgaaaacaagacaaaagaactc 1340 Query: 139 atattgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaaca 198 || ||| | |||||||| ||||| ||||||||||| || ||||||||||| |||||||| Sbjct: 1341 attttgaattatgctaatcagctctgtgagcgtctccctagccccaatggcgagtcaact 1400 Query: 199 gtcagctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagact 258 || |||||| |||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1401 gttgattgccatcagatctcaaagatgccaaatcttgcattcaccatagcaaacaagact 1460 Query: 259 ttcgtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgc 318 ||| ||||||||||||||||||| ||||| ||||||||| |||| || || ||||| Sbjct: 1461 ttcaccttaacaccagagcagtacatagtgaagctggagcaagcaggacaaactatctgc 1520 Query: 319 atcagtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggg 378 ||||||||||| |||||||| ||| ||||||| || || |||||||||||||| || || Sbjct: 1521 atcagtgggtttatggcatttgacgtaccgcctcctcgtggtcctctctggatacttggt 1580 Query: 379 gatgtcttcatggg 392 ||||| || ||||| Sbjct: 1581 gatgtttttatggg 1594
>dbj|AB028888.1| Oryza sativa RAP mRNA for aspartic proteinase, partial cds Length = 492 Score = 228 bits (115), Expect = 1e-56 Identities = 230/267 (86%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 175 ccaagccccaatggagagtcaacagtcagctgccatgagatgtcaaagatgccaaatctt 234 ||||||||||||||||| ||||| |||||||||||| | || || |||||||| |||||| Sbjct: 1 ccaagccccaatggagaatcaactgtcagctgccatcaaatctcgaagatgcctaatctt 60 Query: 235 gctttcgccatagcaaacaagactttcgtgctaacaccagagcagtacattgtgaaactg 294 || ||| |||| ||||||| ||| || | || ||||||||||||||||| ||||||||| Sbjct: 61 gcattcaccattgcaaacaggacatttattcttacaccagagcagtacatcgtgaaactg 120 Query: 295 gagcaatcagggcagaccgtctgcatcagtgggttcatggcattcgacataccgccccca 354 |||||| |||||| |||||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 121 gagcaaggagggcaaaccgtctgcatcagcgggttcatggcgttcgacatacctccacca 180 Query: 355 cgcggtcctctctggattctcggggatgtcttcatgggcggttaccacacccgtgttcga 414 ||||||||||| |||||||| || |||||||||||||| | ||| || | | || ||||| Sbjct: 181 cgcggtcctctttggattcttggagatgtcttcatgggtgcttatcata-cggttttcga 239 Query: 415 cttcggcaaggacagaatcgggttcgc 441 ||||||||| ||||| |||||| |||| Sbjct: 240 cttcggcaaagacaggatcggggtcgc 266
>gb|BT018637.1| Zea mays clone EL01N0504C03.d mRNA sequence Length = 1568 Score = 184 bits (93), Expect = 2e-43 Identities = 189/221 (85%) Strand = Plus / Plus Query: 151 gctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtcagctgccat 210 ||||| ||||| ||||||||||| || ||||||||||| |||||||| || |||||| Sbjct: 978 gctaatcagctctgtgagcgtctccctagccccaatggcgagtcaactgttgattgccat 1037 Query: 211 gagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttcgtgctaaca 270 |||| |||||||||||||||||||| ||| |||||||||| ||||||||| ||||| Sbjct: 1038 cagatctcaaagatgccaaatcttgcattcaccatagcaaataagactttcaccttaaca 1097 Query: 271 ccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatcagtgggttc 330 |||||||||||||| ||||| ||||||||| |||| || || |||||||||||||||| Sbjct: 1098 ccagagcagtacatagtgaagctggagcaagcaggacaaactatctgcatcagtgggttt 1157 Query: 331 atggcattcgacataccgcccccacgcggtcctctctggat 371 |||||||| ||| ||||||| || || |||||||||||||| Sbjct: 1158 atggcatttgacgtaccgcctcctcgtggtcctctctggat 1198
>ref|NM_183594.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1488 Score = 170 bits (86), Expect = 3e-39 Identities = 254/310 (81%) Strand = Plus / Plus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 1117 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 1176 Query: 142 ttgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtc 201 |||||||||||| ||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 1177 ttgcaatatgctgaccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtc 1236 Query: 202 agctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttc 261 |||| ||||||| ||||| ||||| || ||| | ||| |||||||||||||||| ||| Sbjct: 1237 gactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttc 1296 Query: 262 gtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatc 321 | ||||||||||||||| | ||||| |||||||| ||| || || || |||||| Sbjct: 1297 accttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatc 1356 Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 || ||||||||||| |||||| | || || |||||||| || ||||||||||| || || Sbjct: 1357 agcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagac 1416 Query: 382 gtcttcatgg 391 || ||||||| Sbjct: 1417 gtgttcatgg 1426
>dbj|AK104371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E08, full insert sequence Length = 1155 Score = 170 bits (86), Expect = 3e-39 Identities = 254/310 (81%) Strand = Plus / Plus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 400 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 459 Query: 142 ttgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtc 201 |||||||||||| ||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 460 ttgcaatatgctgaccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtc 519 Query: 202 agctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttc 261 |||| ||||||| ||||| ||||| || ||| | ||| |||||||||||||||| ||| Sbjct: 520 gactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttc 579 Query: 262 gtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatc 321 | ||||||||||||||| | ||||| |||||||| ||| || || || |||||| Sbjct: 580 accttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatc 639 Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 || ||||||||||| |||||| | || || |||||||| || ||||||||||| || || Sbjct: 640 agcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagac 699 Query: 382 gtcttcatgg 391 || ||||||| Sbjct: 700 gtgttcatgg 709
>dbj|AK072264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005B17, full insert sequence Length = 1778 Score = 170 bits (86), Expect = 3e-39 Identities = 254/310 (81%) Strand = Plus / Plus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 1201 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 1260 Query: 142 ttgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtc 201 |||||||||||| ||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 1261 ttgcaatatgctgaccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtc 1320 Query: 202 agctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttc 261 |||| ||||||| ||||| ||||| || ||| | ||| |||||||||||||||| ||| Sbjct: 1321 gactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttc 1380 Query: 262 gtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatc 321 | ||||||||||||||| | ||||| |||||||| ||| || || || |||||| Sbjct: 1381 accttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatc 1440 Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 || ||||||||||| |||||| | || || |||||||| || ||||||||||| || || Sbjct: 1441 agcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagac 1500 Query: 382 gtcttcatgg 391 || ||||||| Sbjct: 1501 gtgttcatgg 1510
>dbj|AK066523.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071P15, full insert sequence Length = 2061 Score = 170 bits (86), Expect = 3e-39 Identities = 254/310 (81%) Strand = Plus / Plus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 1282 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 1341 Query: 142 ttgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtc 201 |||||||||||| ||||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 1342 ttgcaatatgctgaccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtc 1401 Query: 202 agctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttc 261 |||| ||||||| ||||| ||||| || ||| | ||| |||||||||||||||| ||| Sbjct: 1402 gactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttc 1461 Query: 262 gtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatc 321 | ||||||||||||||| | ||||| |||||||| ||| || || || |||||| Sbjct: 1462 accttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatc 1521 Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 || ||||||||||| |||||| | || || |||||||| || ||||||||||| || || Sbjct: 1522 agcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagac 1581 Query: 382 gtcttcatgg 391 || ||||||| Sbjct: 1582 gtgttcatgg 1591
>dbj|AK100420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088B02, full insert sequence Length = 1853 Score = 163 bits (82), Expect = 7e-37 Identities = 253/310 (81%) Strand = Plus / Plus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 1228 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 1287 Query: 142 ttgcaatatgctaaccagctgtgtgagcgtctaccaagccccaatggagagtcaacagtc 201 |||||||||||| |||||| || |||||||| |||||||||||||| || || ||||| Sbjct: 1288 ttgcaatatgctggccagctctgcgagcgtctcccaagccccaatggcgaatcggcagtc 1347 Query: 202 agctgccatgagatgtcaaagatgccaaatcttgctttcgccatagcaaacaagactttc 261 |||| ||||||| ||||| ||||| || ||| | ||| |||||||||||||||| ||| Sbjct: 1348 gactgcgatgagatctcaaacatgccgaacctttcattcaccatagcaaacaagaccttc 1407 Query: 262 gtgctaacaccagagcagtacattgtgaaactggagcaatcagggcagaccgtctgcatc 321 | ||||||||||||||| | ||||| |||||||| ||| || || || |||||| Sbjct: 1408 accttgacaccagagcagtacgtagtgaagctggagcagcaaggtcaaactgtttgcatc 1467 Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 || ||||||||||| |||||| | || || |||||||| || ||||||||||| || || Sbjct: 1468 agcgggttcatggcgttcgacgtgccacctccacgcggcccactctggattcttggagac 1527 Query: 382 gtcttcatgg 391 || ||||||| Sbjct: 1528 gtgttcatgg 1537
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 276 gcagtacattgtgaaactggagcaatcagggcagaccgtctgcatcagtgggttcatggc 335 ||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 2118149 gcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggc 2118208 Query: 336 attcgacataccgcccccacgcggtcctct 365 ||||||||||| || |||||||||||||| Sbjct: 2118209 gttcgacatacctccaccacgcggtcctct 2118238 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 163 tgtgagcgtctaccaagccccaatggagagtcaacagtcagctgccatgagatgtcaaag 222 ||||||||||||||||||||||||||||| ||||| |||||||||||| | || || ||| Sbjct: 2117550 tgtgagcgtctaccaagccccaatggagaatcaactgtcagctgccatcaaatctcgaag 2117609 Query: 223 atgccaaatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcag 279 ||||| |||||||| ||| |||| ||||||||||| || | || |||||||||||| Sbjct: 2117610 atgcctaatcttgcattcaccattgcaaacaagacatttattcttacaccagagcag 2117666 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 15 cagcaacgggattgaatccgttgtcggtaaagaaaatgttggctcggatctcatgtgcac 74 |||||| ||||||||||| ||||||| |||||||| | || || ||| ||||| | Sbjct: 2117322 cagcaatgggattgaatctgttgtcgacaaagaaaacttgggttctgatgctatgtgttc 2117381 Query: 75 agcctgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaagga 134 || ||||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 2117382 agtttgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaagga 2117441 Query: 135 gctgatattgcaatatgctaa 155 |||||||||| | |||||||| Sbjct: 2117442 gctgatattgaattatgctaa 2117462 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 368 ggattctcggggatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggac 427 ||||||| || |||||||||||||| | ||| || || || |||||||||||||| ||| Sbjct: 2118348 ggattcttggagatgtcttcatgggtgcttatcatacg-gttttcgacttcggcaaagac 2118406 Query: 428 agaatcgggttcgc 441 || ||||||||||| Sbjct: 2118407 aggatcgggttcgc 2118420 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 28015990 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 28016034
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08, complete sequence Length = 112268 Score = 115 bits (58), Expect = 2e-22 Identities = 82/90 (91%) Strand = Plus / Plus Query: 276 gcagtacattgtgaaactggagcaatcagggcagaccgtctgcatcagtgggttcatggc 335 ||||||||| ||||||||||||||| |||||| |||||||||||||| ||||||||||| Sbjct: 84990 gcagtacatcgtgaaactggagcaaggagggcaaaccgtctgcatcagcgggttcatggc 85049 Query: 336 attcgacataccgcccccacgcggtcctct 365 ||||||||||| || |||||||||||||| Sbjct: 85050 gttcgacatacctccaccacgcggtcctct 85079 Score = 113 bits (57), Expect = 6e-22 Identities = 102/117 (87%) Strand = Plus / Plus Query: 163 tgtgagcgtctaccaagccccaatggagagtcaacagtcagctgccatgagatgtcaaag 222 ||||||||||||||||||||||||||||| ||||| |||||||||||| | || || ||| Sbjct: 84391 tgtgagcgtctaccaagccccaatggagaatcaactgtcagctgccatcaaatctcgaag 84450 Query: 223 atgccaaatcttgctttcgccatagcaaacaagactttcgtgctaacaccagagcag 279 ||||| |||||||| ||| |||| ||||||||||| || | || |||||||||||| Sbjct: 84451 atgcctaatcttgcattcaccattgcaaacaagacatttattcttacaccagagcag 84507 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 15 cagcaacgggattgaatccgttgtcggtaaagaaaatgttggctcggatctcatgtgcac 74 |||||| ||||||||||| ||||||| |||||||| | || || ||| ||||| | Sbjct: 84163 cagcaatgggattgaatctgttgtcgacaaagaaaacttgggttctgatgctatgtgttc 84222 Query: 75 agcctgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaagga 134 || ||||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 84223 agtttgtgagatggctgttgtgtggatagagaaccagctacgcgaaaataaaacgaagga 84282 Query: 135 gctgatattgcaatatgctaa 155 |||||||||| | |||||||| Sbjct: 84283 gctgatattgaattatgctaa 84303 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 368 ggattctcggggatgtcttcatgggcggttaccacacccgtgttcgacttcggcaaggac 427 ||||||| || |||||||||||||| | ||| || || || |||||||||||||| ||| Sbjct: 85189 ggattcttggagatgtcttcatgggtgcttatcatacg-gttttcgacttcggcaaagac 85247 Query: 428 agaatcgggttcgc 441 || ||||||||||| Sbjct: 85248 aggatcgggttcgc 85261
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 10491184 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 10491125 Query: 142 ttgcaatatgctaaccag 159 |||||||||||| ||||| Sbjct: 10491124 ttgcaatatgctgaccag 10491107 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 166 gagcgtctaccaagccccaatggagagtcaacagtcagctgccatgagatgtcaaagatg 225 |||||||| |||||||||||||| || || ||||| |||| ||||||| ||||| ||| Sbjct: 10491013 gagcgtctcccaagccccaatggcgaatcggcagtcgactgcgatgagatctcaaacatg 10490954 Query: 226 ccaaatcttgctttcgccatagcaaacaagac 257 || || ||| | ||| |||||||||||||||| Sbjct: 10490953 ccgaacctttcattcaccatagcaaacaagac 10490922 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 316 tgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctgg 369 |||||||| ||||||||||| |||||| | || || |||||||| || |||||| Sbjct: 10490774 tgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctgg 10490721
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0469E05 Length = 160769 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 82 gagatggctgttgtgtggatagagaaccagctccgtgagaacaaaacaaaggagctgata 141 |||||||||||||| |||||| |||| |||||||| | ||| |||||| |||||| || Sbjct: 136144 gagatggctgttgtctggatacagaatcagctccgacataaccaaacaagggagctcatt 136085 Query: 142 ttgcaatatgctaaccag 159 |||||||||||| ||||| Sbjct: 136084 ttgcaatatgctgaccag 136067 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 166 gagcgtctaccaagccccaatggagagtcaacagtcagctgccatgagatgtcaaagatg 225 |||||||| |||||||||||||| || || ||||| |||| ||||||| ||||| ||| Sbjct: 135973 gagcgtctcccaagccccaatggcgaatcggcagtcgactgcgatgagatctcaaacatg 135914 Query: 226 ccaaatcttgctttcgccatagcaaacaagac 257 || || ||| | ||| |||||||||||||||| Sbjct: 135913 ccgaacctttcattcaccatagcaaacaagac 135882 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 316 tgcatcagtgggttcatggcattcgacataccgcccccacgcggtcctctctgg 369 |||||||| ||||||||||| |||||| | || || |||||||| || |||||| Sbjct: 135734 tgcatcagcgggttcatggcgttcgacgtgccacctccacgcggcccactctgg 135681
>dbj|AB219968.1| Triticum aestivum WAP1 mRNA for aspartic proteinase, complete cds Length = 1527 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 61 gatctcatgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||| |||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 1135 gatcccatgtgcagtgcctgtgagatggctgttgtgtggatgcagaacca 1184 Score = 50.1 bits (25), Expect = 0.007 Identities = 71/85 (83%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 340 gacataccgcccccacgcggtcctctctggattctcggggatgtcttcatgggcggttac 399 ||||| ||||| || ||||||||||||||||| || || || || ||||||||| ||| Sbjct: 1414 gacatcccgcctcctcgcggtcctctctggatcctgggagacgttttcatgggcccctac 1473 Query: 400 cacacccgtgttcgacttcggcaag 424 |||| |||| ||||||| ||||||| Sbjct: 1474 caca-ccgtcttcgactacggcaag 1497
>dbj|AB091763.1| Glycine max soyAP5 mRNA for aspartic proteinase 5, partial cds Length = 636 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 322 agtgggttcatggcattcgacataccgcccccacgcggtcctctctggattctcggggat 381 |||||||| || || || ||||| || || ||||| ||||||||||||||||| |||||| Sbjct: 397 agtgggtttattgcttttgacattcctcctccacggggtcctctctggattcttggggat 456 Query: 382 gtcttcatg 390 || |||||| Sbjct: 457 gttttcatg 465
>dbj|AB045892.1| Nepenthes alata NaAP2 mRNA for aspartic proteinase 2, complete cds Length = 1839 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 67 atgtgcacagcctgtgagatggctgttgtgtggat 101 ||||||||||| ||||||||||| ||||||||||| Sbjct: 1225 atgtgcacagcttgtgagatggcagttgtgtggat 1259
>gb|AY389666.1| Hyacinthus orientalis aspartic proteinase mRNA, partial cds Length = 585 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 344 taccgcccccacgcggtcctctctggattctcggggatgtcttcatgggcggttaccaca 403 ||||||| || || ||||||||||||||| | || |||||||||||| ||| ||| |||| Sbjct: 318 taccgccaccgcggggtcctctctggattttgggtgatgtcttcatgagcgcttatcaca 377 Query: 404 cc 405 || Sbjct: 378 cc 379
>emb|X56136.1|HVASPROT Barley mRNA for aspartic proteinase Length = 1800 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 340 gacataccgcccccacgcggtcctctctggattctcggggatgtcttcatgggc 393 ||||| ||||| || ||||||||||||||||| || || || |||||||||||| Sbjct: 1449 gacatcccgcctcctcgcggtcctctctggatcctgggagacgtcttcatgggc 1502 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 61 gatctcatgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||| |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1170 gatcccatgtgcagtgcctgtgagatggctgttgtatggatgcagaacca 1219
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 96155 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 96199
>dbj|AK104838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-E12, full insert sequence Length = 1777 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1206 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1250
>dbj|AK103421.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K05, full insert sequence Length = 1818 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1207 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1251
>dbj|AK100749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K01, full insert sequence Length = 1086 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 415 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 459 Score = 40.1 bits (20), Expect = 7.2 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 358 ggtcctctctggattctcggggatgtcttcatgggcggttaccacacccgtgttcgactt 417 |||||||||||||| || || || || |||||||| | ||||| ||| |||||||||| Sbjct: 707 ggtcctctctggatcctgggtgacgttttcatgggtgcctaccatacc-gtgttcgacta 765 Query: 418 cggcaagg 425 |||||||| Sbjct: 766 cggcaagg 773
>dbj|AK098911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H22, full insert sequence Length = 1844 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1209 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1253
>dbj|AK098906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D14, full insert sequence Length = 1843 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1204 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1248
>dbj|AK067742.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116C15, full insert sequence Length = 1869 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1207 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1251
>dbj|AK066453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L24, full insert sequence Length = 2543 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1838 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1882
>dbj|D32165.1|RICAP Rice gene for aspartic protease, complete cds Length = 6782 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 5519 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 5563
>dbj|D32144.1|RICAPA Rice mRNA for aspartic protease, complete cds Length = 2030 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 66 catgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 |||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1196 catgtgcaatgcctgtgagatggctgttgtatggatgcagaacca 1240
>ref|NM_101062.2| Arabidopsis thaliana aspartic-type endopeptidase/ pepsin A AT1G11910 mRNA, complete cds Length = 1898 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1196 tgtgagatggctgttgtgtggat 1218
>gb|AY063974.1| Arabidopsis thaliana putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1830 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1196 tgtgagatggctgttgtgtggat 1218
>gb|AY056403.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1820 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1196 tgtgagatggctgttgtgtggat 1218
>gb|AY056387.1| Arabidopsis thaliana At1g11910/F12F1_24 mRNA, complete cds Length = 1874 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1196 tgtgagatggctgttgtgtggat 1218
>dbj|AK221098.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL22-84-P18 Length = 721 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 92 tgtgagatggctgttgtgtggat 114
>dbj|AK221202.1| Arabidopsis thaliana mRNA for putative aspartic proteinase, complete cds, clone: RAFL23-06-J05 Length = 1039 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 320 tgtgagatggctgttgtgtggat 342
>gb|AY088657.1| Arabidopsis thaliana clone 8972 mRNA, complete sequence Length = 1814 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1196 tgtgagatggctgttgtgtggat 1218
>gb|BT001980.1| Arabidopsis thaliana clone U11602 putative aspartic proteinase (At1g11910) mRNA, complete cds Length = 1552 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1147 tgtgagatggctgttgtgtggat 1169
>gb|U51036.1|ATU51036 Arabidopsis thaliana aspartic proteinase mRNA, partial cds Length = 1722 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 1088 tgtgagatggctgttgtgtggat 1110
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggat 101 ||||||||||||||||||||||| Sbjct: 96859 tgtgagatggctgttgtgtggat 96881
>gb|L46681.1|TOMAPP Lycopersicon esculentum aspartic protease precursor mRNA, complete cds Length = 1740 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 68 tgtgcacagcctgtgagatggctgttgtgtggatagagaaccagctc 114 ||||||| |||||||||||||| ||||| ||||| | ||||||||| Sbjct: 1154 tgtgcactgcctgtgagatggcagttgtttggatgcaaaaccagctc 1200 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 cgcggtcctctctggattctcggggatgtcttcatggg 392 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1441 cgcggtcctctttggattcttggagatgtattcatggg 1478
>gb|S80547.1| procathepsin E [guinea pigs, gastric mucosa, mRNA, 1326 nt] Length = 1326 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttcat 389 |||||||| ||||||||||||||||| Sbjct: 1128 ctctggatcctcggggatgtcttcat 1153
>gb|AY672651.1| Solanum tuberosum Asp mRNA, complete cds Length = 1680 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 cgcggtcctctctggattctcggggatgtcttcatggg 392 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1394 cgcggtcctctttggattcttggagatgtattcatggg 1431 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 70 tgcacagcctgtgagatggctgttgtgtggatagagaaccagctc 114 ||||| |||||||||||||| ||||| ||||| | ||||||||| Sbjct: 1109 tgcactgcctgtgagatggcagttgtttggatgcaaaaccagctc 1153
>gb|DQ241852.1| Solanum tuberosum clone 188C11 aspartic protease precursor-like mRNA, complete cds Length = 1764 Score = 44.1 bits (22), Expect = 0.46 Identities = 34/38 (89%) Strand = Plus / Plus Query: 355 cgcggtcctctctggattctcggggatgtcttcatggg 392 ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1447 cgcggtcctctttggattcttggagatgtattcatggg 1484 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 70 tgcacagcctgtgagatggctgttgtgtggatagagaaccagctc 114 ||||| |||||||||||||| ||||| ||||| | ||||||||| Sbjct: 1162 tgcactgcctgtgagatggcagttgtttggatgcaaaaccagctc 1206
>gb|M88653.1|GPIPROCAT Cavia porcellus procathepsin E mRNA, complete cds Length = 1326 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttcat 389 |||||||| ||||||||||||||||| Sbjct: 1128 ctctggatcctcggggatgtcttcat 1153
>ref|XM_322285.1| Neurospora crassa OR74A ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS); N-(5'-PH> (NCU00200.1) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ctcatgtgcacagcctgtgagatgg 88 ||||||||||||||||| ||||||| Sbjct: 1742 ctcatgtgcacagcctgggagatgg 1718
>ref|XM_951492.1| Neurospora crassa OR74A ANTHRANILATE SYNTHASE COMPONENT II [INCLUDES: GLUTAMINE AMIDOTRANSFERASE; INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS); N-(5'-PH> (NCU00200.1) partial mRNA Length = 2289 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ctcatgtgcacagcctgtgagatgg 88 ||||||||||||||||| ||||||| Sbjct: 1742 ctcatgtgcacagcctgggagatgg 1718
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aaaacaaaggagctgatattg 144 ||||||||||||||||||||| Sbjct: 58761 aaaacaaaggagctgatattg 58741
>ref|XM_533610.2| PREDICTED: Canis familiaris napsin 1 (LOC476406), mRNA Length = 1332 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttcatggg 392 |||||||||||||| ||||||||| |||| Sbjct: 1102 ctctggattctcggcgatgtcttcttggg 1130
>emb|AJ586914.1| Physcomitrella patens mRNA for putative vacuolar aspartic proteinase (ORF1) Length = 1940 Score = 42.1 bits (21), Expect = 1.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 68 tgtgcacagcctgtgagatggctgttgtgtggatagagaaccagctccgtgagaacaaaa 127 ||||||||| |||| ||||||||||||||| ||||||||||| || |||||| || Sbjct: 1494 tgtgcacagtatgtggaatggctgttgtgtgggcccagaaccagctcagtcagaacagaa 1553 Query: 128 caaaggagc 136 |||| |||| Sbjct: 1554 caaaagagc 1562
>emb|AJ313385.1|TCA313385 Theobroma cacao mRNA for aspartic proteinase (ap2 gene) Length = 1828 Score = 42.1 bits (21), Expect = 1.8 Identities = 39/45 (86%) Strand = Plus / Plus Query: 361 cctctctggattctcggggatgtcttcatgggcggttaccacacc 405 |||||||||||||| || ||| |||||||||| | ||||||||| Sbjct: 1514 cctctctggattctgggagatatcttcatgggtcgctaccacacc 1558 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 79 tgtgagatggctgttgtgtggatagagaacca 110 ||||||||||| ||||||||||| ||||||| Sbjct: 1232 tgtgagatggcagttgtgtggatgcagaacca 1263
>dbj|AB069959.1| Glycine max soyAP1 mRNA for aspartic proteinase 1, complete cds Length = 1719 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 352 ccacgcggtcctctctggattctcggggatgtcttcatggg 392 ||||| || ||||||||||| || || |||||||||||||| Sbjct: 1444 ccacgtggccctctctggatccttggtgatgtcttcatggg 1484
>gb|J01252.1|NEUTRP1 n.crassa trifunctional tryptophan biosynthesis gene trp-1 Length = 2750 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 64 ctcatgtgcacagcctgtgagatgg 88 ||||||||||||||||| ||||||| Sbjct: 2004 ctcatgtgcacagcctgggagatgg 1980
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 40.1 bits (20), Expect = 7.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 496 gtttgtgcatcttcaga-catgggagcc 522 ||||||||||||||||| |||||||||| Sbjct: 226191 gtttgtgcatcttcagatcatgggagcc 226218
>ref|NM_001025621.1| Canis familiaris cathepsin D (lysosomal aspartyl peptidase) (CTSD), mRNA Length = 1524 Score = 40.1 bits (20), Expect = 7.2 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 356 gcggtcctctctggattctcggggatgtcttcatgggcggttaccacacccgtgttcgac 415 |||| ||||||||||| || || ||||||||||| ||| | ||| ||| ||||||||||| Sbjct: 1199 gcgggcctctctggatcctgggtgatgtcttcatcggctgctactaca-ccgtgttcgac 1257
>gb|BT017963.1| Zea mays clone EL01N0523D02.c mRNA sequence Length = 1169 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 67 atgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 489 atgtgcaatgcctgtgagatggctgtggtatggatgcagaacca 532
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ctctggattctcggggatgtcttc 387 |||||||| ||||||||||||||| Sbjct: 49875 ctctggatcctcggggatgtcttc 49852
>gb|AC122206.4| Mus musculus BAC clone RP23-77G15 from 8, complete sequence Length = 204149 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 gagagtcaacagtcagctgccatg 211 ||||||||||||||||| |||||| Sbjct: 56127 gagagtcaacagtcagccgccatg 56150
>emb|AM048627.1| Canis familiaris mRNA for cathepsin D (ctsd gene) Length = 1524 Score = 40.1 bits (20), Expect = 7.2 Identities = 51/60 (85%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 356 gcggtcctctctggattctcggggatgtcttcatgggcggttaccacacccgtgttcgac 415 |||| ||||||||||| || || ||||||||||| ||| | ||| ||| ||||||||||| Sbjct: 1199 gcgggcctctctggatcctgggtgatgtcttcatcggctgctactaca-ccgtgttcgac 1257
>gb|AC150845.11| Medicago truncatula clone mth2-150a2, complete sequence Length = 131577 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 tttgtgcatcttcagacatg 516 |||||||||||||||||||| Sbjct: 104193 tttgtgcatcttcagacatg 104212
>emb|AL356387.16| Human DNA sequence from clone RP5-1125M8 on chromosome 1p13.1-13.3 Contains the 3' end of the gene for eosinophil chemotactic cytokine (CHIA), a novel gene, a novel gene, a Glycosyl hydrolase faimily 18 pseudogene, a likely ortholog of mouse hypoxia induced gene 1 (HIG1) pseudogene, a progastricsin (pepsinogen C) (PGC) pseudogene and a CpG island, complete sequence Length = 91569 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ctctggattctcggggatgtcttc 387 ||||||||||| |||||||||||| Sbjct: 71713 ctctggattctgggggatgtcttc 71690
>gb|AC160464.3| Mus musculus chromosome 7, clone RP23-256J14, complete sequence Length = 175716 Score = 40.1 bits (20), Expect = 7.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 496 gtttgtgcatcttcaga-catgggagcc 522 ||||||||||||||||| |||||||||| Sbjct: 159027 gtttgtgcatcttcagatcatgggagcc 159000
>gb|BC099409.1| Mus musculus progastricsin (pepsinogen C), mRNA (cDNA clone MGC:117575 IMAGE:30790663), complete cds Length = 1407 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 |||||||| ||||||||||||||| Sbjct: 1145 ctctggatcctcggggatgtcttc 1168
>ref|NM_204877.1| Gallus gallus progastricsin (pepsinogen C) (PGC), mRNA Length = 1339 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 ||||||||||| |||||||||||| Sbjct: 1100 ctctggattcttggggatgtcttc 1123
>gb|U61396.2| Vigna unguiculata aspartic proteinase mRNA, complete cds Length = 1842 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 361 cctctctggattctcggggatgtcttcatggg 392 ||||||||||| || ||||| ||||||||||| Sbjct: 1573 cctctctggatccttggggacgtcttcatggg 1604
>dbj|AK008959.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210416O16 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1385 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>dbj|AK008886.1| Mus musculus adult male stomach cDNA, RIKEN full-length enriched library, clone:2210410L06 product:GASTRICSIN PRECURSOR (EC 3.4.23.3) (PEPSINOGEN C) homolog [Rattus norvegicus], full insert sequence Length = 1388 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>gb|AC002978.1| Homo sapiens 12 PAC P336P3 (Research Park Cancer Institute Human Genome PAC library) complete sequence Length = 102591 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 acagcctgtgagatggctgt 92 |||||||||||||||||||| Sbjct: 84458 acagcctgtgagatggctgt 84439
>gb|AY112455.1| Zea mays CL6331_1 mRNA sequence Length = 1071 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 67 atgtgcacagcctgtgagatggctgttgtgtggatagagaacca 110 ||||||| ||||||||||||||||| || ||||| ||||||| Sbjct: 394 atgtgcaatgcctgtgagatggctgtggtatggatgcagaacca 437
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 ||||||||||| |||||||||||| Sbjct: 123176 ctctggattcttggggatgtcttc 123199
>ref|NM_025973.2| Mus musculus progastricsin (pepsinogen C) (Pgc), mRNA Length = 1385 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 |||||||| ||||||||||||||| Sbjct: 1155 ctctggatcctcggggatgtcttc 1178
>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete sequence Length = 176930 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gagagtcaacagtcagctgc 207 |||||||||||||||||||| Sbjct: 88167 gagagtcaacagtcagctgc 88148
>dbj|AB025284.1| Gallus gallus cPgC gene for pepsinogen C, complete cds Length = 5076 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 ||||||||||| |||||||||||| Sbjct: 4834 ctctggattcttggggatgtcttc 4857
>dbj|AB025282.1| Gallus gallus cPgC mRNA for pepsinogen C, complete cds Length = 1339 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ctctggattctcggggatgtcttc 387 ||||||||||| |||||||||||| Sbjct: 1100 ctctggattcttggggatgtcttc 1123
>dbj|AB025359.2| Helianthus annuus mRNA for aspartic proteinase, complete cds Length = 1722 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 78 ctgtgagatggctgttgtgtggat 101 |||||||||||||||||| ||||| Sbjct: 1171 ctgtgagatggctgttgtttggat 1194 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,696,488 Number of Sequences: 3902068 Number of extensions: 4696488 Number of successful extensions: 73982 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 73776 Number of HSP's gapped (non-prelim): 179 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)