>U308_ARATH (Q9ZUU2) UPF0308 protein At2g37240, chloroplast precursor|
          Length = 248

 Score =  176 bits (445), Expect = 4e-44
 Identities = 77/116 (66%), Positives = 98/116 (84%)
 Frame = +3

Query: 39  GPGTVEQAKVFSDQTKFKGEVYADPDYSSYRALEFANGLFSTFTPSAGLKIIQLYREGYR 218
           GPG+++QA  F +QTKFKGEVYADP+++SY ALEF +G+  TFTP A +KI++ Y EGYR
Sbjct: 133 GPGSIDQANTFVEQTKFKGEVYADPNHASYEALEFVSGVSVTFTPKAAMKILESYMEGYR 192

Query: 219 QDWELSFEKNTRTKGGWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRACCS 386
           QDW+LSF K+T  +GGW QGG+LVAGPG DNISYI KDKEAGDDP +E++L+ACC+
Sbjct: 193 QDWKLSFMKDTVERGGWQQGGILVAGPGKDNISYIRKDKEAGDDPPVEEILKACCA 248

>CI021_MOUSE (Q9D1A0) UPF0308 protein C9orf21 homolog|
          Length = 226

 Score = 35.4 bits (80), Expect = 0.089
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
 Frame = +3

Query: 39  GPGTVEQAKVFSDQTKFKGEVYADPDYSSYRALEFANG-LFSTFTPSAGLKIIQLYREGY 215
           G  +    + F   T +  E+Y DP+   Y+ L    G   S+   S  +K   L     
Sbjct: 97  GQSSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEISSSGQSPHIK-SNLLSGSL 155

Query: 216 RQDWELSFEKNTRTKGG-WYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLR 374
           +  W          +G    QGG L+ GPG +NI ++H+D+   D   +  VL+
Sbjct: 156 QSLWRAVTGPLFDFQGDPAQQGGTLILGPG-NNIHFVHRDRNRLDHKPINSVLQ 208

>CI021_HUMAN (Q7RTV5) UPF0308 protein C9orf21|
          Length = 226

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 1/113 (0%)
 Frame = +3

Query: 39  GPGTVEQAKVFSDQTKFKGEVYADPDYSSYRALEFANGLFSTFTPSAGLKIIQLYREGYR 218
           G  +    + F   T +  E+Y DP+   Y+ L    G     +  +      L     +
Sbjct: 97  GQSSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHIKSNLLSGSLQ 156

Query: 219 QDWELSFEKNTRTKGG-WYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLR 374
             W          +G    QGG L+ GPG +NI +IH+D+   D   +  VL+
Sbjct: 157 SLWRAVTGPLFDFQGDPAQQGGTLILGPG-NNIHFIHRDRNRLDHKPINSVLQ 208

>CJ058_RAT (Q6AXX6) Protein C10orf58 homolog precursor|
          Length = 229

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 28/100 (28%), Positives = 42/100 (42%)
 Frame = +3

Query: 78  QTKFKGEVYADPDYSSYRALEFANGLFSTFTPSAGLKIIQLYREGYRQDWELSFEKNTRT 257
           Q  FKGE++ D     Y        L        GL  + ++   +R  W+  F  N   
Sbjct: 125 QPYFKGEIFLDEKKKFYGPERRKMMLM-------GLVRLGVWYNSFRA-WKGGFSGNFEG 176

Query: 258 KGGWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRA 377
           +G +  GG+ V G G   +   H++KE GD   +  VL A
Sbjct: 177 EG-FILGGVFVIGSGKQGVLLEHREKEFGDRVNLLSVLEA 215

>CJ058_MOUSE (Q9CYH2) Protein C10orf58 homolog precursor|
          Length = 218

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 30/100 (30%), Positives = 42/100 (42%)
 Frame = +3

Query: 78  QTKFKGEVYADPDYSSYRALEFANGLFSTFTPSAGLKIIQLYREGYRQDWELSFEKNTRT 257
           Q  FKGE++ D     Y   E    +F       GL  + ++   +R  W   F  N   
Sbjct: 114 QPYFKGEIFLDEKKKFYGP-ERRKMMFM------GLIRLGVWYNSFRA-WNGGFSGNLEG 165

Query: 258 KGGWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRA 377
           +G +  GG+ V G G   I   H++KE GD      VL A
Sbjct: 166 EG-FILGGVFVIGSGKQGILLEHREKEFGDRVNPLSVLEA 204

>CJ058_HUMAN (Q9BRX8) Protein C10orf58 precursor|
          Length = 229

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 28/100 (28%), Positives = 43/100 (43%)
 Frame = +3

Query: 78  QTKFKGEVYADPDYSSYRALEFANGLFSTFTPSAGLKIIQLYREGYRQDWELSFEKNTRT 257
           Q  FKGE++ D     Y   +    +F  F     +++   Y   + + W   F  N   
Sbjct: 125 QPYFKGEIFLDEKKKFYGP-QRRKMMFMGF-----IRLGVWYN--FFRAWNGGFSGNLEG 176

Query: 258 KGGWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRA 377
           +G +  GG+ V G G   I   H++KE GD   +  VL A
Sbjct: 177 EG-FILGGVFVVGSGKQGILLEHREKEFGDKVNLLSVLEA 215

>CRTC_CHLRE (Q9STD3) Calreticulin precursor|
          Length = 420

 Score = 32.0 bits (71), Expect = 0.98
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 213 YRQDWELSFEKNTRTKGGWYQGGLLVAGPGIDNISYIHKDK 335
           Y+ +W+    KN   KG W         P IDN  Y+H DK
Sbjct: 275 YKGEWKAKMIKNPAYKGIW-------VAPDIDNPDYVHDDK 308

>Y4JQ_RHISN (P55517) Hypothetical 115.9 kDa protein y4jQ|
          Length = 1039

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
 Frame = +3

Query: 252 RTKG-----GWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRACCS*IFS 398
           RTKG      W QG L VA P I NI    K   +  D    DVL      IFS
Sbjct: 158 RTKGLDAQRRWMQGSLYVANPSISNIILYSKGIASEGDRHPSDVLEVLNRFIFS 211

>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24|
          Length = 339

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 204 REGYRQDWELSFEKNTRTKGGWYQGGLLVAGPGIDNISYIHKDKEAGDDPEMEDVLRACC 383
           RE Y+Q WEL  E    TKG    G ++    G    +   +D E  DD E+ + +   C
Sbjct: 197 REDYKQGWELDREWEIGTKGKQLSGRVVSKRSGDAKTA---EDDEDDDDEELLESIPFAC 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,138,642
Number of Sequences: 219361
Number of extensions: 1447889
Number of successful extensions: 3495
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3492
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3696665728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)