Clone Name | baak0a04 |
---|---|
Clone Library Name | barley_pub |
>gb|AY236227.1| Oryza sativa (indica cultivar-group) alanine aminotransferase mRNA, complete cds Length = 1558 Score = 569 bits (287), Expect = e-159 Identities = 461/519 (88%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 702 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 761 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 762 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 821 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| Sbjct: 822 gaacatttatcaagatgagcgcccatttataagtgctagaaaggttctgtttgacatggg 881 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 882 tcctcctatgagcagggaagttcagctggtttctttccatactgtgtcaaaaggatattg 941 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| ||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||| || Sbjct: 942 gggggagtgtggacaacgtggagggtattttgaaatgacaaatcttcctcccaagacagt 1001 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1002 agacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 1061 Query: 361 catggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgc 420 ||||| | ||||| ||||||||||| |||||||| ||||| || ||||||| |||||| Sbjct: 1062 tatgggtttaatggttaaccctcctaagcctggagatatctcttatctgaagttttctgc 1121 Query: 421 tgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgacagacggttt 480 |||||| ||||||||||| || |||||||||||||| |||| | |||||||| ||||| Sbjct: 1122 tgaaagcaagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggttt 1181 Query: 481 caatagttgccgcaatgttgtctgcaatttcacagaagg 519 |||||||||||| |||||||||||||||||||||||||| Sbjct: 1182 caatagttgccgaaatgttgtctgcaatttcacagaagg 1220
>dbj|AK067732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118J02, full insert sequence Length = 1970 Score = 569 bits (287), Expect = e-159 Identities = 461/519 (88%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 751 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 810 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 811 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 870 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| Sbjct: 871 gaacatttatcaagatgagcgcccatttataagtgctagaaaggttctgtttgacatggg 930 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 931 tcctcctatgagcagggaagttcagctggtttctttccatactgtgtcaaaaggatattg 990 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| ||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||| || Sbjct: 991 gggggagtgtggacaacgtggagggtattttgaaatgacaaatcttcctcccaagacagt 1050 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1051 agacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 1110 Query: 361 catggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgc 420 ||||| | ||||| ||||||||||| |||||||| ||||| || ||||||| |||||| Sbjct: 1111 tatgggtttaatggttaaccctcctaagcctggagatatctcttatctgaagttttctgc 1170 Query: 421 tgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgacagacggttt 480 |||||| ||||||||||| || |||||||||||||| |||| | |||||||| ||||| Sbjct: 1171 tgaaagcaagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggttt 1230 Query: 481 caatagttgccgcaatgttgtctgcaatttcacagaagg 519 |||||||||||| |||||||||||||||||||||||||| Sbjct: 1231 caatagttgccgaaatgttgtctgcaatttcacagaagg 1269
>dbj|AK060835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C09, full insert sequence Length = 1581 Score = 569 bits (287), Expect = e-159 Identities = 461/519 (88%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 520 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 579 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 580 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 639 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| |||||||||||||||| |||||||||||||| ||||||||| ||||||||||||| Sbjct: 640 gaacatttatcaagatgagcgcccatttataagtgctagaaaggttctgtttgacatggg 699 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 |||||| | |||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 700 tcctcctatgagcagggaagttcagctggtttctttccatactgtgtcaaaaggatattg 759 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| ||||||||||||||||| ||||| ||||||||||| ||| ||||||||||||| || Sbjct: 760 gggggagtgtggacaacgtggggggtattttgaaatgacaaatcttcctcccaagacagt 819 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 820 agacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 879 Query: 361 catggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgc 420 ||||| | ||||| ||||||||||| |||||||| ||||| || ||||||| |||||| Sbjct: 880 tatgggtttaatggttaaccctcctaagcctggagatatctcttatctgaagttttctgc 939 Query: 421 tgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgacagacggttt 480 |||||| ||||||||||| || |||||||||||||| |||| | |||||||| ||||| Sbjct: 940 tgaaagcaagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggttt 999 Query: 481 caatagttgccgcaatgttgtctgcaatttcacagaagg 519 |||||||||||| |||||||||||||||||||||||||| Sbjct: 1000 caatagttgccgaaatgttgtctgcaatttcacagaagg 1038
>gb|AY108756.1| Zea mays PCO087866 mRNA sequence Length = 1198 Score = 452 bits (228), Expect = e-124 Identities = 446/519 (85%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| ||||| |||| ||| || |||||||||||||| |||||||| ||||| | ||| Sbjct: 101 ggtgatgataaatccagnaaatcccactggccaatgccttagtgaagcgaatataaagga 160 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| || | || ||||| || ||||| || |||||||||||||||||||| |||||||| Sbjct: 161 acttctgcaattttgctaccatgaaaacttagttctgcttgcagatgaagtgtatcaaca 220 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 221 gaacatttatcaagatgagcggccatttataagcgcaagaaaggttatgttcgacatggg 280 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 ||| ||| ||||||| || ||||| | |||||||||| |||||||| ||||| || || Sbjct: 281 tccgccaataagcagtgagcttcaggttgtttctttccacactgtgtcgaaagggtactg 340 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||||||||| |||||||||||||| ||||| |||||||| ||| ||||||||||||| || Sbjct: 341 gggagagtgcggacaacgtggtggatacttcgaaatgacaaatcttcctcccaagacagt 400 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 || ||||| |||||||||||||| || || ||||||||||| ||||||||||| || || Sbjct: 401 agatgagatctacaaggttgcatcaatagcactgagtccaaacgttcctgggcaaatttt 460 Query: 361 catggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgc 420 ||||| | ||||| |||||||||||||||||||| |||||||||||||||| |||| Sbjct: 461 tatgggagtaatggttaaccctcctaaacctggagatatctcgtacctgaagttcgctgc 520 Query: 421 tgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgacagacggttt 480 |||||| ||||| |||| |||||||||||||||||| |||| || |||||||| ||||| Sbjct: 521 tgaaagcaagtccatccatgaatctttgaggaggagagcacgcatgatgacagatggttt 580 Query: 481 caatagttgccgcaatgttgtctgcaatttcacagaagg 519 ||| |||||||| || || || ||||||||||| ||||| Sbjct: 581 caacagttgccgaaacgtcgtgtgcaatttcactgaagg 619
>gb|AY109741.1| Zea mays CL1839_2 mRNA sequence Length = 1303 Score = 442 bits (223), Expect = e-121 Identities = 445/519 (85%) Strand = Plus / Minus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| ||||| |||||||| || |||||||| ||||| |||||||||||||| ||||| Sbjct: 966 ggtgatgataaatccaggaaatcccactggccagtgccttagtgaagcaaatataaggga 907 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| || | ||||| || ||||| || |||||||||||||| ||||| ||||| || Sbjct: 906 acttctgcgatattgctaccatgaaaacttagttctgcttgcagacgaagtgtatcagca 847 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| Sbjct: 846 gaacgtttatcaagatgagcgcccatttataagcgcaagaaaggttatgttcgacatggg 787 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 ||| ||| |||||||||| |||||| | |||||||||| |||||||||||||| || || Sbjct: 786 tccgccaataagcagggaggttcaggttgtttctttccacactgtgtccaaagggtactg 727 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 |||||||||||||||||||||||| ||||| |||||||| ||| ||||||| ||||| || Sbjct: 726 gggagagtgtggacaacgtggtggatacttcgaaatgacaaatcttcctccaaagacagt 667 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 || ||||| |||||||||||||| || | |||||||| |||||||| ||||| ||||| Sbjct: 666 agatgagatatacaaggttgcatcaatagtactgagtccgaatgttcccgggcaaatctt 607 Query: 361 catggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgc 420 ||||| | ||||| |||||||||||||||||||| ||||| |||| ||||| |||| Sbjct: 606 tatgggagtgatggttaaccctcctaaacctggagatatctcatacccgaagttcactgc 547 Query: 421 tgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgacagacggttt 480 ||||| ||||| ||||| ||||||||||||||||| || | || |||||||||||||| Sbjct: 546 cgaaagcaagtccatcctcgaatctttgaggaggagagcgcgcatgatgacagacggttt 487 Query: 481 caatagttgccgcaatgttgtctgcaatttcacagaagg 519 ||| || ||||| ||||| || ||||||||||||||||| Sbjct: 486 caacagctgccgaaatgtggtgtgcaatttcacagaagg 448
>gb|AY090542.1| Deschampsia antarctica clone Dacor 1.7 alanine aminotransferase mRNA, 3' UTR and partial cds Length = 583 Score = 220 bits (111), Expect = 3e-54 Identities = 153/167 (91%) Strand = Plus / Plus Query: 353 cagatcttcatggggcttatggtgaaccctcctaaacctggagacatctcgtacctgaag 412 ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 cagatattcatggggctaatggtgaaccctcctaaacctggagatatctcgtacctgaag 60 Query: 413 tattctgctgaaagtaagtctatccttgaatctttgaggaggagggcacaaataatgaca 472 ||| || ||||||| ||||||||||| || ||||||||||||||||| ||||||||||| Sbjct: 61 tatgctactgaaagcaagtctatcctcgagtctttgaggaggagggcgcaaataatgacc 120 Query: 473 gacggtttcaatagttgccgcaatgttgtctgcaatttcacagaagg 519 || ||||||||||||||||| || |||||||||||||| |||||||| Sbjct: 121 gatggtttcaatagttgccgaaacgttgtctgcaattttacagaagg 167
>gb|DQ118095.1| Vitis vinifera AlaT1 mRNA, complete cds Length = 1455 Score = 184 bits (93), Expect = 2e-43 Identities = 291/357 (81%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| |||||||| ||||| |||||||| || || || |||||||| ||| | | || Sbjct: 642 ggtgattataaaccctggaaatcctactggtcagtgtcttagtgaagccaatttaaaaga 701 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 | | ||| ||||||| || || ||||| || || |||||| |||||||||||| ||||| Sbjct: 702 aatattgcacttctgttaccaagaaaacttagtcttgcttggagatgaagtttaccaaca 761 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 |||| |||| || |||||||| || ||||| ||||| ||||||||| || | |||||||| Sbjct: 762 gaatatttaccaggatgagcgcccttttatcagtgctagaaaggttttgatggacatggg 821 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 || || |||||| ||| | ||||| |||||||||| || || || ||||||||||| Sbjct: 822 cccacccataagcaaggagctccagcttgtttctttccacacagtctctaaaggatattg 881 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| || |||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 882 gggtgaatgtggacagcgtggtggatactttgagatgaccaacattcctccacagactgt 941 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagat 357 || |||||||| ||||||||||| || | || ||||||||||| ||||||||||| Sbjct: 942 tgatgagatttataaggttgcatcaatatcactcagtccaaatgtccctgggcagat 998 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 433 tatccttgaatctttgaggaggagggcacaaataatgacagacggtttcaatagttgccg 492 ||||||||| || ||||||| |||||||| |||||||| || || ||||| |||||| | Sbjct: 1074 tatccttgagtcactgaggagaagggcacagataatgactgatggattcaacagttgcag 1133 Query: 493 caatgttgtctgcaatttcacagaagg 519 ||||| || || |||||||||||||| Sbjct: 1134 aaatgtagtttgtaatttcacagaagg 1160
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 178 bits (90), Expect = 1e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 162 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttccata 221 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 447840 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttccata 447781 Query: 222 ctgtgtccaaaggatattggggagagtgtggacaacgtggtgggtactttgaaatgacga 281 ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| | Sbjct: 447780 ctgtgtcaaaaggatattggggggagtgtggacaacgtggagggtattttgaaatgacaa 447721 Query: 282 atattcctcccaag 295 || ||||||||||| Sbjct: 447720 atcttcctcccaag 447707 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 448287 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 448228 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 448227 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 448168 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 165 ||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 448167 gaacatttatcaagatgagcgcccatttataagtgctagaaaggt 448123 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 428 aagtctatccttgaatctttgaggaggagggcacaaataatgacagacggtttcaatagt 487 ||||||||||| || |||||||||||||| |||| | |||||||| |||||||||||| Sbjct: 446364 aagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggtttcaatagt 446305 Query: 488 tgccgcaatgttgtctgcaatttcacagaagg 519 ||||| |||||||||||||||||||||||||| Sbjct: 446304 tgccgaaatgttgtctgcaatttcacagaagg 446273 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 302 gacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 447111 gacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 447053 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 371 atggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgctgaaag 426 ||||| ||||||||||| |||||||| ||||| || ||||||| |||||||||||| Sbjct: 446571 atggttaaccctcctaagcctggagatatctcttatctgaagttttctgctgaaag 446516
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 178 bits (90), Expect = 1e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 162 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttccata 221 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 50004 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttccata 49945 Query: 222 ctgtgtccaaaggatattggggagagtgtggacaacgtggtgggtactttgaaatgacga 281 ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| | Sbjct: 49944 ctgtgtcaaaaggatattggggggagtgtggacaacgtggagggtattttgaaatgacaa 49885 Query: 282 atattcctcccaag 295 || ||||||||||| Sbjct: 49884 atcttcctcccaag 49871 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 50451 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 50392 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 50391 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 50332 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 165 ||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 50331 gaacatttatcaagatgagcgcccatttataagtgctagaaaggt 50287 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 428 aagtctatccttgaatctttgaggaggagggcacaaataatgacagacggtttcaatagt 487 ||||||||||| || |||||||||||||| |||| | |||||||| |||||||||||| Sbjct: 48528 aagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggtttcaatagt 48469 Query: 488 tgccgcaatgttgtctgcaatttcacagaagg 519 ||||| |||||||||||||||||||||||||| Sbjct: 48468 tgccgaaatgttgtctgcaatttcacagaagg 48437 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 302 gacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 49275 gacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 49217 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 371 atggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgctgaaag 426 ||||| ||||||||||| |||||||| ||||| || ||||||| |||||||||||| Sbjct: 48735 atggttaaccctcctaagcctggagatatctcttatctgaagttttctgctgaaag 48680
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 178 bits (90), Expect = 1e-41 Identities = 123/134 (91%) Strand = Plus / Minus Query: 162 aggttatgtttgacatgggtcctccagtaagcagggaagttcagctgatttctttccata 221 ||||| ||||||||||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 1752 aggttctgtttgacatgggtcctcctatgagcagggaagttcagctggtttctttccata 1693 Query: 222 ctgtgtccaaaggatattggggagagtgtggacaacgtggtgggtactttgaaatgacga 281 ||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| | Sbjct: 1692 ctgtgtcaaaaggatattggggggagtgtggacaacgtggagggtattttgaaatgacaa 1633 Query: 282 atattcctcccaag 295 || ||||||||||| Sbjct: 1632 atcttcctcccaag 1619 Score = 161 bits (81), Expect = 3e-36 Identities = 144/165 (87%) Strand = Plus / Minus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| || ||||||||||||||||||||||||||||| ||||||| ||| || | ||| Sbjct: 2199 ggtgattatcaacccaggaaaccctactggccaatgccttagtgaaggaaacataaagga 2140 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 |||| | || ||||||| || || || || |||||||||||||||||||| |||||||| Sbjct: 2139 acttctcaaattctgcttccatgagaacttagttctgcttgcagatgaagtctatcaaca 2080 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggt 165 ||| |||||||||||||||| |||||||||||||| |||||||| Sbjct: 2079 gaacatttatcaagatgagcgcccatttataagtgctagaaaggt 2035 Score = 111 bits (56), Expect = 2e-21 Identities = 83/92 (90%) Strand = Plus / Minus Query: 428 aagtctatccttgaatctttgaggaggagggcacaaataatgacagacggtttcaatagt 487 ||||||||||| || |||||||||||||| |||| | |||||||| |||||||||||| Sbjct: 276 aagtctatcctcgagtctttgaggaggagagcacgcctgatgacagatggtttcaatagt 217 Query: 488 tgccgcaatgttgtctgcaatttcacagaagg 519 ||||| |||||||||||||||||||||||||| Sbjct: 216 tgccgaaatgttgtctgcaatttcacagaagg 185 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 302 gacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatctt 360 |||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1023 gacgagatctacaaggttgcatcaatcgcactcagtccaaatgttcctgggcagatctt 965 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 371 atggtgaaccctcctaaacctggagacatctcgtacctgaagtattctgctgaaag 426 ||||| ||||||||||| |||||||| ||||| || ||||||| |||||||||||| Sbjct: 483 atggttaaccctcctaagcctggagatatctcttatctgaagttttctgctgaaag 428
>gb|DQ118094.1| Vitis labrusca AlaT1 mRNA, complete cds Length = 1434 Score = 168 bits (85), Expect = 1e-38 Identities = 289/357 (80%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| |||||||| ||||| |||||||| || || || |||||||| ||| | | || Sbjct: 642 ggtgattataaaccctggaaatcctactggtcagtgtcttagtgaagccaatttaaaaga 701 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 | | ||| ||||||| | || ||||| || || |||||| |||||||||||| ||||| Sbjct: 702 aatattgcacttctgtaaccaagaaaacttagtcttgcttggagatgaagtttaccaaca 761 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 |||| |||| || |||||||| || ||||| ||||| ||||||| | || | |||||||| Sbjct: 762 gaatatttaccaggatgagcgcccttttatcagtgctagaaaggctttgatggacatggg 821 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 || || |||||| ||| | ||||| |||||||||| || || || ||||||||||| Sbjct: 822 cccacccataagcaaggagctccagcttgtttctttccacacagtctctaaaggatattg 881 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| || |||||||| |||||||| |||||||| ||||| || |||||||| ||||||| Sbjct: 882 gggtgaatgtggacagcgtggtggatactttgagatgaccaacattcctccacagactgt 941 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagat 357 || |||||||| ||||||||||| || | || ||||||||||| ||||||||||| Sbjct: 942 tgatgagatttataaggttgcatcaatatcactcagtccaaatgtccctgggcagat 998 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 433 tatccttgaatctttgaggaggagggcacaaataatgacagacggtttcaatagttgccg 492 ||||||||| || ||||||| |||||||| |||||||| || || |||||||||||| | Sbjct: 1074 tatccttgagtcactgaggagaagggcacagataatgactgatggattcaatagttgcag 1133 Query: 493 caatgttgtctgcaatttcacagaagg 519 ||||| || || |||||||||||||| Sbjct: 1134 aaatgtagtttgtaatttcacagaagg 1160
>ref|NM_001036185.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.3 mRNA, complete cds Length = 1817 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 979 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1038 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1039 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1098 Query: 311 tacaaggt 318 |||||||| Sbjct: 1099 tacaaggt 1106
>ref|NM_001036186.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.4 mRNA, complete cds Length = 1835 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 997 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1056 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1057 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1116 Query: 311 tacaaggt 318 |||||||| Sbjct: 1117 tacaaggt 1124
>ref|NM_105726.2| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.1 mRNA, complete cds Length = 1795 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 957 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1016 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1017 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1076 Query: 311 tacaaggt 318 |||||||| Sbjct: 1077 tacaaggt 1084
>ref|NM_202393.1| Arabidopsis thaliana AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); alanine transaminase AT1G70580 (AOAT2) transcript variant AT1G70580.2 mRNA, complete cds Length = 1851 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 1013 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1072 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1073 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1132 Query: 311 tacaaggt 318 |||||||| Sbjct: 1133 tacaaggt 1140
>gb|AY062982.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1477 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 832 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 891 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 892 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 951 Query: 311 tacaaggt 318 |||||||| Sbjct: 952 tacaaggt 959
>gb|AY035130.1| Arabidopsis thaliana putative alanine aminotransferase (At1g70580) mRNA, complete cds Length = 1773 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 957 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1016 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1017 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1076 Query: 311 tacaaggt 318 |||||||| Sbjct: 1077 tacaaggt 1084
>gb|AY084890.1| Arabidopsis thaliana clone 120310 mRNA, complete sequence Length = 1782 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 957 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 1016 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 1017 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 1076 Query: 311 tacaaggt 318 |||||||| Sbjct: 1077 tacaaggt 1084
>gb|AF479640.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 2 (GGT2) mRNA, complete cds Length = 1582 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 851 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 910 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 || ||||| || || |||||||| ||||| ||||| ||||||| ||| || || ||||| Sbjct: 911 gggcaacggggaggttactttgagatgacaaatatccctcccaggaccgttgaggagata 970 Query: 311 tacaaggt 318 |||||||| Sbjct: 971 tacaaggt 978
>gb|AC010796.7|AC010796 Arabidopsis thaliana chromosome 1 BAC F24J13 genomic sequence, complete sequence Length = 87400 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 64822 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 64881 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctccca 293 || ||||| || || |||||||| ||||| ||||| ||||||| Sbjct: 64882 gggcaacggggaggttactttgagatgacaaatatccctccca 64924
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete sequence Length = 108582 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| || |||||||| || || ||||||||||| ||||| || ||| Sbjct: 89680 agcaaggaagttcagctcatatctttccacaccgtttccaaaggatactggggcgaatgt 89621 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctccca 293 || ||||| || || |||||||| ||||| ||||| ||||||| Sbjct: 89620 gggcaacggggaggttactttgagatgacaaatatccctccca 89578
>emb|AM260496.1| Platanus acerifolia partial mRNA for alanine aminotransferase (at gene) Length = 568 Score = 73.8 bits (37), Expect = 5e-10 Identities = 268/345 (77%) Strand = Plus / Plus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaagcaaatattaggga 60 |||||| ||||||||||||||||||||||| || || || ||||||| | | | | ||| Sbjct: 157 ggtgattataaacccaggaaaccctactggtcagtgtctgggtgaagctagtctaaagga 216 Query: 61 acttttgaacttctgctatcaggaaaaattggttctgcttgcagatgaagtttatcaaca 120 ||| | |||| || | || ||||| |||| ||||| ||||||||||||||||| || Sbjct: 217 actactacacttttgtttccaagaaaacttggccctgctcgcagatgaagtttatcagca 276 Query: 121 gaatgtttatcaagatgagcgtccatttataagtgcaagaaaggttatgtttgacatggg 180 ||| || || || ||||| || || || || ||||| |||||| || || | |||||||| Sbjct: 277 gaacgtataccaggatgaacgccctttcattagtgctagaaagattttgatggacatggg 336 Query: 181 tcctccagtaagcagggaagttcagctgatttctttccatactgtgtccaaaggatattg 240 || || |||||| ||| || || || | |||| || ||||| |||||||| ||||| Sbjct: 337 cccacctataagcaaggaggtccaactcgtgtcttatcacactgtctccaaagggtattg 396 Query: 241 gggagagtgtggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgt 300 ||| || |||||||| || || || ||||| || ||||| || |||||||| ||||||| Sbjct: 397 gggtgaatgtggacagcgggggggatacttcgagatgaccaacattcctccacagactgt 456 Query: 301 cgacgagatttacaaggttgcatcgatcgcgctgagtccaaatgt 345 || ||||| || || |||||||| || | || ||||||||||| Sbjct: 457 tgatgagatctataaagttgcatccatatcactcagtccaaatgt 501
>ref|NM_102180.2| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.1 mRNA, complete cds Length = 2052 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 1134 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 1193 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 1194 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1253 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1254 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1313 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1314 atggttaatcctccaaagcctggagacat 1342
>ref|NM_001036006.1| Arabidopsis thaliana GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1) AT1G23310 (GGT1) transcript variant AT1G23310.2 mRNA, complete cds Length = 2066 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 1168 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 1227 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 1228 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1287 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1288 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1347 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1348 atggttaatcctccaaagcctggagacat 1376
>gb|AY150373.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1477 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 832 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 891 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 892 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 951 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 952 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1011 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1012 atggttaatcctccaaagcctggagacat 1040
>gb|AF360195.1| Arabidopsis thaliana putative alanine aminotransferase (At1g23310) mRNA, complete cds Length = 1768 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 956 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 1015 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 1016 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1075 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1076 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1135 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1136 atggttaatcctccaaagcctggagacat 1164
>gb|AY058868.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1762 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 938 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 997 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 998 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1057 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1058 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1117 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1118 atggttaatcctccaaagcctggagacat 1146
>gb|AY056379.1| Arabidopsis thaliana At1g23310/F26F24_4 mRNA, complete cds Length = 1647 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 938 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 997 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 998 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1057 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1058 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1117 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1118 atggttaatcctccaaagcctggagacat 1146
>gb|AY042902.1| Arabidopsis thaliana alanine aminotransferase-like protein (F26F24.16) mRNA, partial cds Length = 1328 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 527 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 586 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 587 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 646 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 647 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 706 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 707 atggttaatcctccaaagcctggagacat 735
>emb|BX814587.1|CNS0AAUD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZG03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 921 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 980 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 981 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1040 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1041 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1100 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1101 atggttaatcctccaaagcctggagacat 1129
>gb|AF479639.1| Arabidopsis thaliana glutamate:glyoxylate aminotransferase 1 (GGT1) mRNA, complete cds Length = 1714 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 979 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 1038 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 1039 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 1098 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 1099 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1158 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1159 atggttaatcctccaaagcctggagacat 1187
>gb|BT002643.1| Arabidopsis thaliana At1g23310/F26F24_4 gene, complete cds Length = 1446 Score = 65.9 bits (33), Expect = 1e-07 Identities = 165/209 (78%) Strand = Plus / Plus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 832 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 891 Query: 251 ggacaacgtggtgggtactttgaaatgacgaatattcctcccaagactgtcgacgagatt 310 ||||| || ||||| |||||||| ||||| || | ||||| | | ||| || ||||| Sbjct: 892 ggacagcgaggtggatactttgagatgaccaacctccctccaagggttgttgaggagata 951 Query: 311 tacaaggttgcatcgatcgcgctgagtccaaatgttcctgggcagatcttcatggggctt 370 |||||||||||||| || || || || || ||||| ||| ||| ||||| ||||| | Sbjct: 952 tacaaggttgcatcaattgccctcagccctaatgtctctgcgcaaatctttatgggtttg 1011 Query: 371 atggtgaaccctcctaaacctggagacat 399 ||||| || ||||| || ||||||||||| Sbjct: 1012 atggttaatcctccaaagcctggagacat 1040
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Minus Query: 189 taagcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagt 248 |||||| |||||| ||||| ||||||| || | ||||| ||||| |||| || || | Sbjct: 79446 taagcaaggaagtccagcttgtttcttttcactcagtgtcaaaagggtattttggtgaat 79387 Query: 249 gtggacaacgtggtgggtactttgaaatgacgaatattcctcc 291 |||||||||||||||| || ||||||||||| || |||||||| Sbjct: 79386 gtggacaacgtggtggatattttgaaatgaccaacattcctcc 79344 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 1 ggtgataataaacccaggaaaccctactggccaatgcctaagtgaag 47 |||||| ||||| || |||||||||||||| |||||||| ||||||| Sbjct: 79715 ggtgatcataaatcctggaaaccctactggtcaatgccttagtgaag 79669
>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I, complete sequence Length = 99053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 191 agcagggaagttcagctgatttctttccatactgtgtccaaaggatattggggagagtgt 250 |||| |||||||||||| | ||||| || || || || |||||||||||||| || ||| Sbjct: 46109 agcaaggaagttcagcttgtatcttttcacacagtctctaaaggatattggggtgaatgt 46050 Query: 251 ggacaacgtggtgggtactttgaaatgac 279 ||||| || ||||| |||||||| ||||| Sbjct: 46049 ggacagcgaggtggatactttgagatgac 46021
>ref|XM_643324.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (461.t00001) partial mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 tttatcaacagaatgtttatca 132 |||||||||||||||||||||| Sbjct: 210 tttatcaacagaatgtttatca 231
>ref|XM_650385.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (28.t00005) partial mRNA Length = 735 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 111 tttatcaacagaatgtttatca 132 |||||||||||||||||||||| Sbjct: 291 tttatcaacagaatgtttatca 312
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence Length = 188243 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 atgaagtttatcaacagaatg 125 ||||||||||||||||||||| Sbjct: 124963 atgaagtttatcaacagaatg 124943
>gb|AC117250.3| Mus musculus BAC clone RP24-366A20 from 12, complete sequence Length = 125733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 105 atgaagtttatcaacagaatg 125 ||||||||||||||||||||| Sbjct: 7514 atgaagtttatcaacagaatg 7494
>gb|AC131997.23| Mus musculus chromosome 15, clone RP23-381H9, complete sequence Length = 194206 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 catgggtcctccagtaagca 194 |||||||||||||||||||| Sbjct: 142565 catgggtcctccagtaagca 142546
>ref|XM_391482.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11306.1) partial mRNA Length = 4050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 ccaagactgtcgacgagatt 310 |||||||||||||||||||| Sbjct: 899 ccaagactgtcgacgagatt 918
>emb|BX284613.3| Human DNA sequence from clone RP5-1092L12 on chromosome 1 Contains the 3' end of a novel gene (FLJ23550) and a novel pseudogene, complete sequence Length = 106576 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gctatcaggaaaaattggtt 94 |||||||||||||||||||| Sbjct: 90153 gctatcaggaaaaattggtt 90172
>emb|AL161443.13| Human DNA sequence from clone RP11-169L18 on chromosome 9 Contains the 3' end of the JMJD2C gene for jumonji domain containing 2C, complete sequence Length = 140439 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 tgaaagtaagtctatccttg 440 |||||||||||||||||||| Sbjct: 12735 tgaaagtaagtctatccttg 12716
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 tacctgaagtattctgctga 423 |||||||||||||||||||| Sbjct: 174053 tacctgaagtattctgctga 174034
>emb|AL445563.1|MPULM01 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 1/3 Length = 327650 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aaatattagggaacttttga 68 |||||||||||||||||||| Sbjct: 319556 aaatattagggaacttttga 319537
>emb|AL732631.4| Mouse DNA sequence from clone RP23-345P19 on chromosome 11 no genes, complete sequence Length = 191363 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 aaatgttcctgggcagatct 359 |||||||||||||||||||| Sbjct: 168553 aaatgttcctgggcagatct 168572
>gb|AC090160.6| Homo sapiens chromosome 11, clone RP11-413N10, complete sequence Length = 170008 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tactgtgtccaaaggatatt 239 |||||||||||||||||||| Sbjct: 30423 tactgtgtccaaaggatatt 30404
>gb|AC011345.5| Homo sapiens chromosome 5 clone CTC-293E5, complete sequence Length = 105797 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tgtgtccaaaggatattggggaga 246 ||||||||||||||| |||||||| Sbjct: 14422 tgtgtccaaaggatagtggggaga 14445
>gb|DQ026694.1| Sciurothamnion sp. strain Hungtou 16S ribosomal RNA gene, partial sequence; plastid Length = 1407 Score = 40.1 bits (20), Expect = 7.0 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 431 tctatcctt-gaatctttgaggaggagggcac 461 ||||||||| ||||||||||||| |||||||| Sbjct: 1344 tctatccttagaatctttgaggaagagggcac 1375
>gb|AC008250.23| Homo sapiens 12 BAC RP11-729I10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141132 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 aaaattggttctgcttgcagatga 108 ||||||| |||||||||||||||| Sbjct: 15086 aaaattgcttctgcttgcagatga 15063
>emb|Z68344.1|HSQ25 Human DNA sequence from clone XX-Q25 on chromosome 11, complete sequence Length = 34569 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 tactgtgtccaaaggatatt 239 |||||||||||||||||||| Sbjct: 21463 tactgtgtccaaaggatatt 21482
>dbj|AP004918.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT13I21, TM0076a, complete sequence Length = 71794 Score = 40.1 bits (20), Expect = 7.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 248 tgtggacaacgtggtgggtactttgaaatgac 279 |||||||| || ||||| |||||||||||||| Sbjct: 33921 tgtggacagcggggtggatactttgaaatgac 33890 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,696,998 Number of Sequences: 3902068 Number of extensions: 4696998 Number of successful extensions: 83185 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 82991 Number of HSP's gapped (non-prelim): 184 length of query: 519 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 496 effective length of database: 17,143,297,704 effective search space: 8503075661184 effective search space used: 8503075661184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)