ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf100e15 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT833140.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA212G11, full insert sequence Length = 696 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 255 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 314 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 315 accagccacctgcgcggccgccacgggctcgcgctcggcctc 356 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 425 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 484 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 485 ccaccgcgaggaggc 499
>ref|NM_001058254.1| Oryza sativa (japonica cultivar-group) Os03g0820400 (Os03g0820400) mRNA, complete cds Length = 688 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 255 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 314 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 315 accagccacctgcgcggccgccacgggctcgcgctcggcctc 356 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 425 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 484 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 485 ccaccgcgaggaggc 499
>gb|AY286473.1| Oryza sativa (japonica cultivar-group) zinc finger protein ZFP15 mRNA, complete cds Length = 465 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 140 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 199 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 200 accagccacctgcgcggccgccacgggctcgcgctcggcctc 241 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 310 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 369 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 370 ccaccgcgaggaggc 384
>gb|AY305864.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger transcription factor ZFP37 (ZFP37) mRNA, complete cds Length = 683 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 243 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 302 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 303 accagccacctgcgcggccgccacgggctcgcgctcggcctc 344 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 413 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 472 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 473 ccaccgcgaggaggc 487
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 34214544 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 34214603 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 34214604 accagccacctgcgcggccgccacgggctcgcgctcggcctc 34214645 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 34211003 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 34211062 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 34211063 cggaccagccacctccgcgg 34211082 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 34214714 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 34214773 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 34214774 ccaccgcgaggaggc 34214788 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 34197636 gggcaggcgctcggcggccacatgcggcggcaccg 34197602 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||| ||||||||||||| | ||| ||||||| ||||||||||||| || |||||||| Sbjct: 34197867 ttcgagtgcaagacgtgcaggcgccggttcccgtcgttccaggcgctcggcggccaccg 34197809 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 34211173 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 34211232 Query: 468 gcaccg 473 ||||| Sbjct: 34211233 ccaccg 34211238 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| | ||||||||||| || ||||||||| |||||||| Sbjct: 9495689 gttcccgtccttccaggcgctcggcggccaccgggccagccac 9495647
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 87884 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 87943 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 87944 accagccacctgcgcggccgccacgggctcgcgctcggcctc 87985 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 84343 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 84402 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 84403 cggaccagccacctccgcgg 84422 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 88054 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 88113 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 88114 ccaccgcgaggaggc 88128 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 70976 gggcaggcgctcggcggccacatgcggcggcaccg 70942 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||| ||||||||||||| | ||| ||||||| ||||||||||||| || |||||||| Sbjct: 71207 ttcgagtgcaagacgtgcaggcgccggttcccgtcgttccaggcgctcggcggccaccg 71149 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 84513 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 84572 Query: 468 gcaccg 473 ||||| Sbjct: 84573 ccaccg 84578
>dbj|AK119690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-B05, full insert sequence Length = 688 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 241 ttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccgg 300 ||||| |||||||||||| ||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 255 ttcgtctgcaagacgtgcagccgcgcgttcccgtcgttccaggcgctgggcggccaccgg 314 Query: 301 accagccacctgcgcggacgccacgggctcgcgctcgccctc 342 ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 315 accagccacctgcgcggccgccacgggctcgcgctcggcctc 356 Score = 69.9 bits (35), Expect = 1e-08 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| ||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 425 gtgccacatctgcggccaaggcttcgagatgggccaggcgctcggcggccacatgcgccg 484 Query: 468 gcaccgtgacgaggc 482 ||||| || ||||| Sbjct: 485 ccaccgcgaggaggc 499
>emb|CT829318.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI021E01, full insert sequence Length = 852 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 237 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 296 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 297 cggaccagccacctccgcgg 316 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 407 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 466 Query: 468 gcaccg 473 ||||| Sbjct: 467 ccaccg 472
>emb|CT829317.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI016A02, full insert sequence Length = 828 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 231 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 290 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 291 cggaccagccacctccgcgg 310 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 401 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 460 Query: 468 gcaccg 473 ||||| Sbjct: 461 ccaccg 466
>emb|CT829316.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI011O15, full insert sequence Length = 888 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 231 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 290 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 291 cggaccagccacctccgcgg 310 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 401 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 460 Query: 468 gcaccg 473 ||||| Sbjct: 461 ccaccg 466
>ref|NM_001058253.1| Oryza sativa (japonica cultivar-group) Os03g0820300 (Os03g0820300) mRNA, complete cds Length = 851 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 238 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 297 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 298 cggaccagccacctccgcgg 317 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 408 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 467 Query: 468 gcaccg 473 ||||| Sbjct: 468 ccaccg 473
>gb|AY286474.1| Oryza sativa (japonica cultivar-group) zinc finger protein ZFP14 mRNA, complete cds Length = 540 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 171 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 230 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 231 cggaccagccacctccgcgg 250 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 341 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 400 Query: 468 gcaccg 473 ||||| Sbjct: 401 ccaccg 406
>dbj|AK068861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170H07, full insert sequence Length = 852 Score = 103 bits (52), Expect = 8e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||||||| ||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 239 gagttcgtgtgcaagacttgcagccgcgcgttcccgaccttccaggcgctcgggggccac 298 Query: 298 cggaccagccacctgcgcgg 317 |||||||||||||| ||||| Sbjct: 299 cggaccagccacctccgcgg 318 Score = 52.0 bits (26), Expect = 0.003 Identities = 56/66 (84%) Strand = Plus / Plus Query: 408 gtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacatgcgccg 467 |||| |||||||||||| | ||||||| || ||||||||||||||||||||||| || Sbjct: 409 gtgccacatctgcggcctcggcttcgagatgggccaggcgctcggcggacacatgcggcg 468 Query: 468 gcaccg 473 ||||| Sbjct: 469 ccaccg 474
>gb|DQ151543.1| Hordeum vulgare subsp. vulgare cultivar Optic ZFP16-2 (ZFP16-2) mRNA, partial cds Length = 789 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |||||||| Sbjct: 57 gttcgtgtgcaagacctgcgaccgtgtgttcccgtcgttccaggcgctgggcggccaccg 116 Query: 300 gaccagccac 309 | |||||||| Sbjct: 117 ggccagccac 126
>gb|DQ151542.1| Hordeum vulgare subsp. vulgare cultivar Morex ZFP16-2 (ZFP16-2) gene, partial cds Length = 689 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |||||||| Sbjct: 39 gttcgtgtgcaagacctgcgaccgtgtgttcccgtcgttccaggcgctgggcggccaccg 98 Query: 300 gaccagccac 309 | |||||||| Sbjct: 99 ggccagccac 108
>gb|DQ151541.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo ZFP16-2 (ZFP16-2) gene, partial cds Length = 689 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||| |||| ||| ||||||| |||||||||||||||| |||||||| Sbjct: 39 gttcgtgtgcaagacctgcgaccgtgtgttcccgtcgttccaggcgctgggcggccaccg 98 Query: 300 gaccagccac 309 | |||||||| Sbjct: 99 ggccagccac 108
>gb|AC117265.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1281_H05, complete sequence Length = 163130 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 92824 gttcccgacgttccaggcgctgggcggccaccgcgccagccac 92866 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 93071 gggcaggcgctcggcgggcacatgcggcggcaccg 93105 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| |||||||| |||||| Sbjct: 82978 gggcaggcgctcggcgggcacatgcggcggcac 82946
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 22503417 gttcccgacgttccaggcgctgggcggccaccgcgccagccac 22503459 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||||| |||||||||||| |||| ||||||| ||||||||||||| || |||||||| Sbjct: 752492 gttcgtctgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccg 752433 Query: 300 gaccagccac 309 |||||||| Sbjct: 752432 tgccagccac 752423 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 22503664 gggcaggcgctcggcgggcacatgcggcggcaccg 22503698 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| |||||||| |||||| Sbjct: 22493571 gggcaggcgctcggcgggcacatgcggcggcac 22493539 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 23632689 ctctcgctctcgctctccctc 23632669
>gb|DQ244241.1| Zea mays clone 3770 mRNA sequence Length = 834 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| |||| |||||| |||||||||||||| || |||||||| Sbjct: 271 gttcgagtgcaagacgtgcagccggcagttccccacgttccaggcgctcgggggccaccg 330 Query: 300 gaccagccac 309 |||||||| Sbjct: 331 cgccagccac 340 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccgtg 475 |||||||||||||| ||||||||||||||||||| Sbjct: 491 caggcgctcggcggccacatgcgccggcaccgtg 524
>ref|NM_001060995.1| Oryza sativa (japonica cultivar-group) Os05g0114400 (Os05g0114400) mRNA, complete cds Length = 884 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||||| |||||||||||| |||| ||||||| ||||||||||||| || |||||||| Sbjct: 261 gttcgtctgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccg 320 Query: 300 gaccagccac 309 |||||||| Sbjct: 321 tgccagccac 330
>ref|NM_001051282.1| Oryza sativa (japonica cultivar-group) Os01g0838600 (Os01g0838600) mRNA, partial cds Length = 761 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| ||| ||||||||||||||||||||| || |||||||| Sbjct: 246 gttcgagtgcaagacgtgcaaccggcagttcccgacgttccaggcgctcgggggccaccg 305 Query: 300 gaccagccac 309 |||||||| Sbjct: 306 cgccagccac 315 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 472 gggcaggcgctcggcgggcacatgcgtcggcaccg 506
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||||| |||||||||||| |||| ||||||| ||||||||||||| || |||||||| Sbjct: 24934 gttcgtctgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccg 24875 Query: 300 gaccagccac 309 |||||||| Sbjct: 24874 tgccagccac 24865
>gb|DQ151540.1| Hordeum vulgare subsp. vulgare cultivar Optic ZFP16-1 (ZFP16-1) mRNA, complete cds Length = 986 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||||||| |||| ||||||| |||| ||||||||||| || ||||| Sbjct: 192 gttcgtgtgcaagacgtgccaccgcgtgttcccgtcgtttcaggcgctgggagggcaccg 251 Query: 300 gaccagccac 309 |||||||| Sbjct: 252 tgccagccac 261
>gb|DQ151539.1| Hordeum vulgare subsp. vulgare cultivar Morex HvZFP16-1 (ZFP16-1) gene, complete cds Length = 857 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||||||| |||| ||||||| |||| ||||||||||| || ||||| Sbjct: 147 gttcgtgtgcaagacgtgccaccgcgtgttcccgtcgtttcaggcgctgggagggcaccg 206 Query: 300 gaccagccac 309 |||||||| Sbjct: 207 tgccagccac 216
>gb|DQ151538.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo ZFP16-1 (ZFP16-1) gene, complete cds Length = 857 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||||||||||||||||| |||| ||||||| |||| ||||||||||| || ||||| Sbjct: 147 gttcgtgtgcaagacgtgccaccgcgtgttcccgtcgtttcaggcgctgggagggcaccg 206 Query: 300 gaccagccac 309 |||||||| Sbjct: 207 tgccagccac 216
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| ||| ||||||||||||||||||||| || |||||||| Sbjct: 35959932 gttcgagtgcaagacgtgcaaccggcagttcccgacgttccaggcgctcgggggccaccg 35959873 Query: 300 gaccagccac 309 |||||||| Sbjct: 35959872 cgccagccac 35959863 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 35994880 gggcaggcgctcggcggccacatgcgccggcac 35994912 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 35959706 gggcaggcgctcggcgggcacatgcgtcggcaccg 35959672 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 35994723 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 35994765 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctcgg 179 |||||||||||||||||| ||||||| Sbjct: 35907289 tcgctctcgctctcgctccccctcgg 35907264
>dbj|AP003231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D11 Length = 138108 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| ||| ||||||||||||||||||||| || |||||||| Sbjct: 58610 gttcgagtgcaagacgtgcaaccggcagttcccgacgttccaggcgctcgggggccaccg 58551 Query: 300 gaccagccac 309 |||||||| Sbjct: 58550 cgccagccac 58541 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 93558 gggcaggcgctcggcggccacatgcgccggcac 93590 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 58384 gggcaggcgctcggcgggcacatgcgtcggcaccg 58350 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 93401 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 93443 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctcgg 179 |||||||||||||||||| ||||||| Sbjct: 5967 tcgctctcgctctcgctccccctcgg 5942
>dbj|AK108981.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F01, full insert sequence Length = 884 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||||| |||||||||||| |||| ||||||| ||||||||||||| || |||||||| Sbjct: 261 gttcgtctgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccg 320 Query: 300 gaccagccac 309 |||||||| Sbjct: 321 tgccagccac 330
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 |||||| |||||||||||| |||| ||||||| ||||||||||||| || |||||||| Sbjct: 97673 gttcgtctgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccg 97614 Query: 300 gaccagccac 309 |||||||| Sbjct: 97613 tgccagccac 97604
>emb|CT831398.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN012H15, full insert sequence Length = 883 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 403 gggcaggcgctcggcggccacatgcgccggcac 435 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 246 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 288
>ref|NM_001070047.1| Oryza sativa (japonica cultivar-group) Os09g0483800 (Os09g0483800) mRNA, complete cds Length = 382 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 243 gggcaggcgctcggcggccacatgcgccggcac 275 Score = 44.1 bits (22), Expect = 0.65 Identities = 58/70 (82%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| | ||||||||| || |||||| |||||| || ||||| Sbjct: 66 gttcgagtgcaagacgtgcaacaagtcgttcccgtcgctccaggggctgggcgggcaccg 125 Query: 300 gaccagccac 309 ||| |||||| Sbjct: 126 gacaagccac 135
>ref|NM_001051285.1| Oryza sativa (japonica cultivar-group) Os01g0839100 (Os01g0839100) mRNA, complete cds Length = 860 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 380 gggcaggcgctcggcggccacatgcgccggcac 412 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 223 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 265
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 148827 gggcaggcgctcggcggccacatgcgccggcac 148795 Score = 44.1 bits (22), Expect = 0.65 Identities = 58/70 (82%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| | ||||||||| || |||||| |||||| || ||||| Sbjct: 149004 gttcgagtgcaagacgtgcaacaagtcgttcccgtcgctccaggggctgggcgggcaccg 148945 Query: 300 gaccagccac 309 ||| |||||| Sbjct: 148944 gacaagccac 148935
>gb|AY305867.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger transcription factor ZFP21 (ZFP21) mRNA, complete cds Length = 382 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 243 gggcaggcgctcggcggccacatgcgccggcac 275 Score = 44.1 bits (22), Expect = 0.65 Identities = 58/70 (82%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| | ||||||||| || |||||| |||||| || ||||| Sbjct: 66 gttcgagtgcaagacgtgcaacaagtcgttcccgtcgctccaggggctgggcgggcaccg 125 Query: 300 gaccagccac 309 ||| |||||| Sbjct: 126 gacaagccac 135
>gb|AY077725.1| Oryza sativa C2H2 zinc finger protein (ZFP) mRNA, complete cds Length = 883 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 374 gggcaggcgctcggcggccacatgcgccggcac 406 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 217 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 259
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 18506397 gggcaggcgctcggcggccacatgcgccggcac 18506365 Score = 44.1 bits (22), Expect = 0.65 Identities = 58/70 (82%) Strand = Plus / Minus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| | ||||||||| || |||||| |||||| || ||||| Sbjct: 18506574 gttcgagtgcaagacgtgcaacaagtcgttcccgtcgctccaggggctgggcgggcaccg 18506515 Query: 300 gaccagccac 309 ||| |||||| Sbjct: 18506514 gacaagccac 18506505
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 7605 gggcaggcgctcggcggccacatgcgccggcac 7637 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 7448 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 7490
>dbj|AK108227.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-F08, full insert sequence Length = 864 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcac 471 ||||||||||||||||| ||||||||||||||| Sbjct: 384 gggcaggcgctcggcggccacatgcgccggcac 416 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| |||||||||||||||| || |||||||| |||||| Sbjct: 227 gttcccgtcgttccaggcgctgggcgggcaccggacgagccac 269
>emb|CT833322.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI013A03, full insert sequence Length = 823 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 558 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcgggcacat 617 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 618 gcgccgccaccg 629 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 430 acgttccaggctctcggcggccaccggaccagccac 465
>ref|NM_001075064.1| Oryza sativa (japonica cultivar-group) Os11g0702400 (Os11g0702400) mRNA, complete cds Length = 843 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 395 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcggccacat 454 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 455 gcgccgccaccg 466 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 267 acgttccaggctctcggcggccaccggaccagccac 302
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 93990 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcggccacat 93931 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 93930 gcgccgccaccg 93919 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 94118 acgttccaggctctcggcggccaccggaccagccac 94083 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 ccaggcgctgggtggccaccggaccagccacct 311 ||||||||| || |||||||||||||| ||||| Sbjct: 90319 ccaggcgctcggcggccaccggaccagtcacct 90287
>gb|AY305866.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger transcription factor ZFP17 (ZFP17) mRNA, complete cds Length = 537 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 306 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcgggcacat 365 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 366 gcgccgccaccg 377 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 178 acgttccaggctctcggcggccaccggaccagccac 213
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 28135435 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcggccacat 28135376 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 28135375 gcgccgccaccg 28135364 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Minus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 28135563 acgttccaggctctcggcggccaccggaccagccac 28135528 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 ccaggcgctgggtggccaccggaccagccacct 311 ||||||||| || |||||||||||||| ||||| Sbjct: 28131764 ccaggcgctcggcggccaccggaccagtcacct 28131732
>dbj|AK105226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-B01, full insert sequence Length = 845 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 397 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcggccacat 456 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 457 gcgccgccaccg 468 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 269 acgttccaggctctcggcggccaccggaccagccac 304
>dbj|AK062491.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-H07, full insert sequence Length = 668 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 402 gcaccggtgcaacatctgcggccaagagttcgagactgggcaggcgctcggcggacacat 461 |||||||||| |||| |||||| | | ||||| || || |||||||||||||| ||||| Sbjct: 396 gcaccggtgcgacatgtgcggcaaggtgttcgccaccggccaggcgctcggcggccacat 455 Query: 462 gcgccggcaccg 473 |||||| ||||| Sbjct: 456 gcgccgccaccg 467 Score = 48.1 bits (24), Expect = 0.041 Identities = 33/36 (91%) Strand = Plus / Plus Query: 274 acgttccaggcgctgggtggccaccggaccagccac 309 ||||||||||| || || |||||||||||||||||| Sbjct: 268 acgttccaggctctcggcggccaccggaccagccac 303
>emb|CT834905.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116K22, full insert sequence Length = 1000 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 501 gggcaggcgctcggcgggcacatgcgtcggcaccg 535 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| ||| |||||| |||||||||||||| || |||||||| Sbjct: 274 gttcgagtgcaagacgtgcaaccggcagttcccaacgttccaggcgctcgggggccaccg 333 Query: 300 gaccagccac 309 |||||||| Sbjct: 334 cgccagccac 343
>gb|AY305865.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger transcription factor ZFP16 (ZFP16) mRNA, complete cds Length = 627 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 247 tgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccggaccagc 306 |||||||||||| |||| ||||||| ||||||||||||| || |||||||| ||||| Sbjct: 172 tgcaagacgtgcaaccgcgtgttcccgtcgttccaggcgctcggcggccaccgcgccagc 231 Query: 307 cac 309 ||| Sbjct: 232 cac 234
>gb|AY266289.1| Oryza sativa (japonica cultivar-group) zinc finger transcription factor ZFP19 (ZFP19) mRNA, complete cds Length = 761 Score = 54.0 bits (27), Expect = 7e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 439 gggcaggcgctcggcggacacatgcgccggcaccg 473 ||||||||||||||||| |||||||| |||||||| Sbjct: 472 gggcaggcgctcggcgggcacatgcgtcggcaccg 506 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 240 gttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccaccg 299 ||||| ||||||||||||| ||| |||||| |||||||||||||| || |||||||| Sbjct: 246 gttcgagtgcaagacgtgcaaccggcagttcccaacgttccaggcgctcgggggccaccg 305 Query: 300 gaccagccac 309 |||||||| Sbjct: 306 cgccagccac 315
>emb|CT833697.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN043G17, full insert sequence Length = 1623 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 731 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 772 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 437 ctgggcaggcgctcggcggacacatgcgccggcaccg 473 |||| |||||||||||||| |||||||| |||||||| Sbjct: 1062 ctggccaggcgctcggcggccacatgcggcggcaccg 1098
>ref|NM_001058661.1| Oryza sativa (japonica cultivar-group) Os04g0162500 (Os04g0162500) mRNA, partial cds Length = 1080 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 263 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 304 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| |||||||| |||||||| Sbjct: 599 caggcgctcggcggccacatgcggcggcaccg 630
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 52.0 bits (26), Expect = 0.003 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Minus Query: 266 cgttcccgacgttccaggcgctgggtggccaccggaccagccacctgcgc 315 |||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 135965 cgttcccgttgttccaggtgctgggcggccaccggacca-ccacctgcgc 135917
>gb|AC068951.18| Oryza sativa chromosome 10 BAC OSJNBa0042E19 genomic sequence, complete sequence Length = 149978 Score = 52.0 bits (26), Expect = 0.003 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 266 cgttcccgacgttccaggcgctgggtggccaccggaccagccacctgcgc 315 |||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 142376 cgttcccgttgttccaggtgctgggcggccaccggacca-ccacctgcgc 142424
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 52.0 bits (26), Expect = 0.003 Identities = 45/50 (90%), Gaps = 1/50 (2%) Strand = Plus / Plus Query: 266 cgttcccgacgttccaggcgctgggtggccaccggaccagccacctgcgc 315 |||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 16524277 cgttcccgttgttccaggtgctgggcggccaccggacca-ccacctgcgc 16524325
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 4268838 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 4268879 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| |||||||| |||||||| Sbjct: 4269174 caggcgctcggcggccacatgcggcggcaccg 4269205 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 6905750 ctctcgctctcgctctccctc 6905770
>dbj|AK108645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-B03, full insert sequence Length = 1080 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 263 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 304 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| |||||||| |||||||| Sbjct: 599 caggcgctcggcggccacatgcggcggcaccg 630
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 16706 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 16747 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| |||||||| |||||||| Sbjct: 17042 caggcgctcggcggccacatgcggcggcaccg 17073
>emb|AL606654.3|OSJN00100 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0028M18, complete sequence Length = 132854 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 268 ttcccgacgttccaggcgctgggtggccaccggaccagccac 309 |||||| ||||||||||||| || |||||||| ||||||||| Sbjct: 111902 ttcccgtcgttccaggcgctcggcggccaccgcaccagccac 111943 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| |||||||| |||||||| Sbjct: 112238 caggcgctcggcggccacatgcggcggcaccg 112269
>emb|AM260480.1| Ralstonia eutropha H16 chromosome 2 Length = 2912490 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 209 tgcgccgcgccggcgccgtcggtgg 233 ||||||||||||||||||||||||| Sbjct: 1447785 tgcgccgcgccggcgccgtcggtgg 1447761
>gb|DQ244879.1| Zea mays clone 11295 mRNA sequence Length = 998 Score = 48.1 bits (24), Expect = 0.041 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 caggcgctcggcggacacatgcgccggcaccg 473 |||||||||||||| ||||||||||| ||||| Sbjct: 408 caggcgctcggcggccacatgcgccgccaccg 439
>ref|XM_001227599.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_09673) mRNA, complete cds Length = 1788 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 151 ctgtcgctctcgctctcgctctcc 174 |||||||||||||||||||||||| Sbjct: 158 ctgtcgctctcgctctcgctctcc 135
>ref|XM_001154260.1| PREDICTED: Pan troglodytes similar to FKSG52 (LOC743015), mRNA Length = 1151 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 1148 tcgctctcgctctcgctctccctc 1125
>ref|XM_001071028.1| PREDICTED: Rattus norvegicus hypothetical protein LOC689509 (LOC689509), mRNA Length = 441 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 62 tcgctctcgctctcgctctccctc 39
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 24578 tcgctctcgctctcgctctccctc 24601
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190042 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 144562 tcgctctcgctctcgctctccctc 144539
>gb|AC116800.11| Mus musculus chromosome 8, clone RP24-335D17, complete sequence Length = 168912 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 118262 tcgctctcgctctcgctctccctc 118285
>gb|AC137067.33| Mus musculus strain C57BL/6J clone rp23-288i20, complete sequence Length = 207232 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 199706 tcgctctcgctctcgctctccctc 199729
>gb|AY574035.1| Zea mays rust resistance protein rp3-1 (rp3-1) gene, complete cds; and truncated rust resistance protein rp3-2t (rp3-2) gene, complete sequence Length = 276326 Score = 48.1 bits (24), Expect = 0.041 Identities = 73/88 (82%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 238 gagttcgtgtgcaagacgtgcggccgctcgttcccgacgttccaggcgctgggtggccac 297 ||||||||||||| | | ||| ||||| | ||| | ||||| ||||||| ||||||||| Sbjct: 271365 gagttcgtgtgcaggccctgcagccgcaccttcacctcgttctaggcgctcggtggccac 271306 Query: 298 cggaccagccacctgcgcggacgccacg 325 ||||||| |||||| || || ||||||| Sbjct: 271305 cggacca-ccacctacgagggcgccacg 271279
>gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome 9, complete sequence Length = 175945 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 47035 tcgctctcgctctcgctctccctc 47058
>gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, complete sequence Length = 176552 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 103134 tcgctctcgctctcgctctccctc 103157
>gb|AC122932.4| Mus musculus BAC clone RP23-16A20 from 1, complete sequence Length = 197193 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 29206 tcgctctcgctctcgctctccctc 29183
>gb|AC156606.12| Mus musculus chromosome 7, clone RP23-78N8, complete sequence Length = 200034 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 53246 tcgctctcgctctcgctctccctc 53223
>gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, complete sequence Length = 191609 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 121444 tcgctctcgctctcgctctccctc 121467
>gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 106673 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 66508 tcgctctcgctctcgctctccctc 66531
>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence Length = 110883 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 30268 tcgctctcgctctcgctctccctc 30245
>gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complete sequence Length = 163114 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 69040 tcgctctcgctctcgctctccctc 69063
>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a peroxisomal biogenesis factor 12 (PEX12) pseudogene, complete sequence Length = 136943 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 68838 tcgctctcgctctcgctctccctc 68815
>emb|AL121906.18|HSDJ63M2 Human DNA sequence from clone RP1-63M2 on chromosome 20 Contains the 3' end of the CBFA2T2 gene for runt domain core-binding factor alpha subunit 2, the C20orf134 gene, the E2F1 gene for E2F transcription factor 1, the APBA2BP gene for amyloid beta (A4) precursor protein-binding family A, member 2 protein, the C20orf144 gene and six CpG islands, complete sequence Length = 81914 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 74918 tcgctctcgctctcgctctccctc 74941
>emb|AL049594.4|HSDJ860P4 Human DNA sequence from clone RP5-860P4 on chromosome 20 Contains the 3' end of the C20orf39 gene for chromosome 20 open reading frame 39, a novel gene and a CpG island, complete sequence Length = 156791 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 14378 tcgctctcgctctcgctctccctc 14355
>gb|AC010683.10| Homo sapiens BAC clone RP11-364M6 from 4, complete sequence Length = 175283 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 87118 tcgctctcgctctcgctctccctc 87141
>gb|AC135355.3| Mus musculus BAC clone RP24-495F22 from chromosome 6, complete sequence Length = 171057 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 95856 tcgctctcgctctcgctctccctc 95833
>gb|AC131009.7| Homo sapiens 12 BAC RP11-417L19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170327 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 144783 tcgctctcgctctcgctctccctc 144760
>gb|U00235.1|U00235 Ovis aries subspecies Mufflon DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB32) gene, partial cds Length = 425 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 373 tctgtcgctctcgctctcgctctc 350
>gb|U00233.1|U00233 Ovis aries Merino breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB30) gene, partial cds Length = 439 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 387 tctgtcgctctcgctctcgctctc 364
>gb|U00231.1|U00231 Ovis aries Merino breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB28) gene, partial cds Length = 439 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 391 tctgtcgctctcgctctcgctctc 368
>gb|U00230.1|U00230 Ovis aries Kasach DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB27) gene, partial cds Length = 439 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 391 tctgtcgctctcgctctcgctctc 368
>gb|U00227.1|U00227 Ovis aries Merino breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB24) gene, partial cds Length = 453 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 405 tctgtcgctctcgctctcgctctc 382
>gb|U00226.1|U00226 Ovis aries Merino breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB23) gene, partial cds Length = 457 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 411 tctgtcgctctcgctctcgctctc 388
>gb|U00225.1|U00225 Ovis aries Perendale breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB22) gene, partial cds Length = 455 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 407 tctgtcgctctcgctctcgctctc 384
>gb|U00224.1|U00224 Ovis aries Perendal and Romney breeds DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB21) gene, partial cds Length = 455 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 407 tctgtcgctctcgctctcgctctc 384
>gb|U00223.1|U00223 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB20) gene, partial cds Length = 449 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 401 tctgtcgctctcgctctcgctctc 378
>gb|U00221.1|U00221 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB18) gene, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 399 tctgtcgctctcgctctcgctctc 376
>gb|U00216.1|U00216 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB14) gene, partial cds Length = 443 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 395 tctgtcgctctcgctctcgctctc 372
>gb|U00215.1|U00215 Ovis aries Perendale breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB13) gene, partial cds Length = 441 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 393 tctgtcgctctcgctctcgctctc 370
>gb|U00212.1|U00212 Ovis aries Coopworth breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB10) gene, partial cds Length = 499 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 447 tctgtcgctctcgctctcgctctc 424
>gb|U00211.1|U00211 Ovis aries Texel breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB09) gene, partial cds Length = 433 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 385 tctgtcgctctcgctctcgctctc 362
>gb|U00210.1|U00210 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB07) gene, partial cds Length = 437 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 389 tctgtcgctctcgctctcgctctc 366
>gb|U00209.1|U00209 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB07) gene, partial cds Length = 497 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 445 tctgtcgctctcgctctcgctctc 422
>gb|U00208.1|U00208 Ovis aries Finnish Landrace breed DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB06) gene, partial cds Length = 467 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 415 tctgtcgctctcgctctcgctctc 392
>gb|U00205.1|U00205 Ovis aries subspecies Argali DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB02) gene, partial cds Length = 475 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 421 tctgtcgctctcgctctcgctctc 398
>gb|U00204.1|U00204 Ovis aries Perendale and Romney breeds DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB01) gene, partial cds Length = 483 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 tctgtcgctctcgctctcgctctc 173 |||||||||||||||||||||||| Sbjct: 431 tctgtcgctctcgctctcgctctc 408
>gb|AC145087.14| Mus musculus chromosome 1, clone RP23-255P18, complete sequence Length = 187470 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 9250 tcgctctcgctctcgctctccctc 9273
>emb|BX679673.6| Mouse DNA sequence from clone RP23-252K15 on chromosome X, complete sequence Length = 81270 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 250 tcgctctcgctctcgctctccctc 227
>emb|BX649621.5| Mouse DNA sequence from clone RP23-173F3 on chromosome X, complete sequence Length = 195039 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 193289 tcgctctcgctctcgctctccctc 193266
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 32841 tcgctctcgctctcgctctccctc 32864
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 48.1 bits (24), Expect = 0.041 Identities = 24/24 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctc 177 |||||||||||||||||||||||| Sbjct: 97514 tcgctctcgctctcgctctccctc 97491
>emb|CT833199.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN044A18, full insert sequence Length = 855 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| | ||||||||||| || ||||||||| |||||||| Sbjct: 268 gttcccgtccttccaggcgctcggcggccaccgggccagccac 310
>ref|NM_001056269.1| Oryza sativa (japonica cultivar-group) Os03g0279700 (Os03g0279700) mRNA, complete cds Length = 932 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| | ||||||||||| || ||||||||| |||||||| Sbjct: 268 gttcccgtccttccaggcgctcggcggccaccgggccagccac 310
>emb|AL137072.8| Human DNA sequence from clone RP11-29B11 on chromosome 9 Contains the 5' end of the TXNDC4 gene for thioredoxin domain containing 4 (endoplasmic reticulum) (ERP44, ERp44,KIAA0573), the 5' end of the INVS gene for inversin, a ribosomal protein S2 (RPS2) pseudogene, a novel pseudogene and two CpG islands, complete sequence Length = 172830 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 155 cgctctcgctctcgctctccctc 177 ||||||||||||||||||||||| Sbjct: 59285 cgctctcgctctcgctctccctc 59307
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 330 cgcgctcgccctcaccaccggcg 352 ||||||||||||||||||||||| Sbjct: 834043 cgcgctcgccctcaccaccggcg 834065
>gb|AC128693.8| Homo sapiens 3 BAC RP13-563D5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 143617 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 155 cgctctcgctctcgctctccctc 177 ||||||||||||||||||||||| Sbjct: 31993 cgctctcgctctcgctctccctc 31971
>gb|AC137069.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009C19, from chromosome 3, complete sequence Length = 131709 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| | ||||||||||| || ||||||||| |||||||| Sbjct: 115118 gttcccgtccttccaggcgctcggcggccaccgggccagccac 115160
>dbj|AK111338.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F05, full insert sequence Length = 932 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 267 gttcccgacgttccaggcgctgggtggccaccggaccagccac 309 ||||||| | ||||||||||| || ||||||||| |||||||| Sbjct: 268 gttcccgtccttccaggcgctcggcggccaccgggccagccac 310
>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete sequence Length = 204841 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 155 cgctctcgctctcgctctccctc 177 ||||||||||||||||||||||| Sbjct: 180812 cgctctcgctctcgctctccctc 180790
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 205 aagatgcgccgcgccggcgccg 226 |||||||||||||||||||||| Sbjct: 3488039 aagatgcgccgcgccggcgccg 3488018
>ref|XM_001054077.1| PREDICTED: Rattus norvegicus hypothetical protein LOC678980 (LOC678980), mRNA Length = 312 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 89 tcgctctcgctctcgctctccc 68
>gb|AC099948.10| Mus musculus chromosome 10, clone RP23-19D21, complete sequence Length = 203197 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 122737 tcgctctcgctctcgctctccc 122716
>gb|AC167221.9| Mus musculus 10 BAC RP23-3P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204841 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 988 tcgctctcgctctcgctctccc 967
>gb|AC166082.11| Mus musculus 10 BAC RP23-150M2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 170819 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 13648 tcgctctcgctctcgctctccc 13627
>ref|XM_444952.1| Candida glabrata CBS138 hypothetical protein (CAGL0A04257g) partial mRNA Length = 1935 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 62 tcgctctcgctctcgctctccc 41
>gb|AC104163.2| Homo sapiens chromosome 3 clone RP11-66G8, complete sequence Length = 169418 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gctctcgctctcgctctccctc 177 |||||||||||||||||||||| Sbjct: 167949 gctctcgctctcgctctccctc 167970
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Minus Query: 156 gctctcgctctcgctctccctc 177 |||||||||||||||||||||| Sbjct: 105185 gctctcgctctcgctctccctc 105164
>emb|CR380947.1| Candida glabrata strain CBS138 chromosome A complete sequence Length = 485192 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccc 175 |||||||||||||||||||||| Sbjct: 419536 tcgctctcgctctcgctctccc 419557
>dbj|D16416.1|WHTWZF1B Triticum aestivum mRNA for zinc-finger protein WZF1, complete cds Length = 1254 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 435 gactgggcaggcgctcggcggacaca 460 ||||||||||||||||||||| |||| Sbjct: 638 gactgggcaggcgctcggcgggcaca 663
>dbj|D16415.1|WHTWZF1A Triticum aestivum gene for zinc-finger protein WZF1, complete cds Length = 2862 Score = 44.1 bits (22), Expect = 0.65 Identities = 25/26 (96%) Strand = Plus / Plus Query: 435 gactgggcaggcgctcggcggacaca 460 ||||||||||||||||||||| |||| Sbjct: 1747 gactgggcaggcgctcggcgggcaca 1772
>gb|AF110371.1|AF110371 Leishmania major clone LmV2-G2 unknown gene, partial cds Length = 410 Score = 44.1 bits (22), Expect = 0.65 Identities = 22/22 (100%) Strand = Plus / Plus Query: 156 gctctcgctctcgctctccctc 177 |||||||||||||||||||||| Sbjct: 233 gctctcgctctcgctctccctc 254
>dbj|AK243307.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100055D19, full insert sequence Length = 808 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 279 ccaggcgctgggtggccaccggaccagccacct 311 ||||||||| || |||||||||||||| ||||| Sbjct: 451 ccaggcgctcggcggccaccggaccagtcacct 419
>ref|XM_001193065.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC761738 (LOC761738), mRNA Length = 2193 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 accaacagccaccatccacat 22 ||||||||||||||||||||| Sbjct: 107 accaacagccaccatccacat 127
>ref|NM_024016.3| Homo sapiens homeobox B8 (HOXB8), mRNA Length = 1834 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 1450 tcgctctcgctctcgctctctctcg 1474
>ref|NM_001053511.1| Oryza sativa (japonica cultivar-group) Os02g0521300 (Os02g0521300) mRNA, complete cds Length = 2625 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 141 ctctcgctctcgctctccctc 161
>ref|XM_001155999.1| PREDICTED: Pan troglodytes similar to WD repeat domain 44 (LOC747139), partial mRNA Length = 1841 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 1457 ctttatatgtgtacatataat 1477
>ref|XM_001120284.1| PREDICTED: Apis mellifera similar to zinc finger protein 91 (LOC724428), mRNA Length = 5589 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 gagttcgtgtgcaagacgtgc 258 ||||||||||||||||||||| Sbjct: 445 gagttcgtgtgcaagacgtgc 465
>emb|CR954253.1| Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 complete genome Length = 1864998 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 gtcggtggggatgagttcgtg 246 ||||||||||||||||||||| Sbjct: 567127 gtcggtggggatgagttcgtg 567147
>emb|CR293510.8| Zebrafish DNA sequence from clone CH211-212A4 in linkage group 7, complete sequence Length = 112503 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 ttctgtcgctctcgctctcgctctc 173 |||| |||||||||||||||||||| Sbjct: 84833 ttctctcgctctcgctctcgctctc 84809
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 102326 ctctcgctctcgctctccctc 102346
>gb|DQ195220.1| Mycosphaerella populorum isolate 02203A microsatellite flanking region SM_satA, allele 204 sequence Length = 204 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 81 ctctcgctctcgctctccctc 101
>gb|AC137842.8| Mus musculus chromosome 15, clone RP23-91M6, complete sequence Length = 230609 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 98873 ctctcgctctcgctctccctc 98893
>ref|XM_872357.1| PREDICTED: Bos taurus similar to receptor-interacting factor 1 isoform 1, transcript variant 4 (LOC539067), mRNA Length = 1421 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ttctgtcgctctcgctctcgctctc 173 |||| |||||||||||||||||||| Sbjct: 72 ttctctcgctctcgctctcgctctc 96
>gb|BC013924.1| Homo sapiens WD repeat domain 44, mRNA (cDNA clone IMAGE:3680558), with apparent retained intron Length = 1207 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 797 ctttatatgtgtacatataat 817
>gb|AC153597.13| Mus musculus 6 BAC RP23-18K9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197694 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 15947 ctctcgctctcgctctccctc 15927
>gb|AC151903.3| Mus musculus BAC clone RP23-216I7 from chromosome 14, complete sequence Length = 232727 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 20594 tcgctctcgctctcgctctctctcg 20618
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15, complete sequence Length = 137357 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 22694 ctctcgctctcgctctccctc 22674
>gb|AC147051.2| Mus musculus BAC clone RP23-90H22 from chromosome 8, complete sequence Length = 224213 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 123712 tcgctctcgctctcgctctcc 123732
>gb|AC140424.2| Mus musculus BAC clone RP23-112O8 from chromosome 9, complete sequence Length = 179943 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 98286 ctctcgctctcgctctccctc 98306
>gb|AC122479.3| Mus musculus BAC clone RP24-344E5 from chromosome 14, complete sequence Length = 185254 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 74425 tcgctctcgctctcgctctctctcg 74401
>gb|AC111012.3| Mus musculus BAC clone RP24-146N3 from 8, complete sequence Length = 155637 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 144746 tcgctctcgctctcgctctcc 144766
>dbj|AK096222.1| Homo sapiens cDNA FLJ38903 fis, clone NT2NE2001252, highly similar to HOMEOBOX PROTEIN HOX-B8 Length = 1822 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 1450 tcgctctcgctctcgctctctctcg 1474
>dbj|AK001978.1| Homo sapiens cDNA FLJ11116 fis, clone PLACE1005966, weakly similar to TRANSCRIPTION INITIATION FACTOR TFIID 90 KD SUBUNIT Length = 2605 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 2224 ctttatatgtgtacatataat 2244
>gb|AC119801.14| Mus musculus, clone RP23-54N13, complete sequence Length = 251756 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 76381 tcgctctcgctctcgctctctctcg 76405
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 3080729 ctctcgctctcgctctccctc 3080749
>gb|BC028697.2| Homo sapiens WD repeat domain 44, mRNA (cDNA clone MGC:26781 IMAGE:4837674), complete cds Length = 4096 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3699 ctttatatgtgtacatataat 3719
>gb|AC174742.8| Mus musculus BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163118 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 161740 ctctcgctctcgctctccctc 161720
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 76780 tcgctctcgctctcgctctctctcg 76804
>ref|XM_757374.1| Ustilago maydis 521 hypothetical protein (UM06320.1) partial mRNA Length = 4320 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 3968 tcgctctcgctctcgctctcgctcg 3944
>ref|XM_757451.1| Ustilago maydis 521 hypothetical protein (UM06397.1) partial mRNA Length = 1047 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 789 tcgctctcgctctcgctctcc 809
>ref|XM_807113.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506407.20) partial mRNA Length = 903 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 458 tcgctctcgctctcgctctcc 438
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 agatgcgccgcgccggcgccg 226 ||||||||||||||||||||| Sbjct: 344158 agatgcgccgcgccggcgccg 344138
>gb|AC010362.6| Homo sapiens chromosome 5 clone CTD-2037I18, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 cattggttggttcattccttt 614 ||||||||||||||||||||| Sbjct: 55686 cattggttggttcattccttt 55706
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 19020333 ctctcgctctcgctctccctc 19020313
>emb|AJ937310.1| Juglans regia mRNA for putative Cys2-His2 zinc finger transcription factor (zfp2 gene) Length = 804 Score = 42.1 bits (21), Expect = 2.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 277 ttccaggcgctgggtggccaccggaccagccac 309 ||||| ||||||||||||||||| |||||||| Sbjct: 280 ttccaagcgctgggtggccaccgagccagccac 312
>emb|CR318653.8| Zebrafish DNA sequence from clone DKEY-19B23 in linkage group 7, complete sequence Length = 235090 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ttctgtcgctctcgctctcgctctc 173 |||| |||||||||||||||||||| Sbjct: 51030 ttctctcgctctcgctctcgctctc 51054
>emb|AL391803.14| Human DNA sequence from clone RP13-25C19 on chromosome X Contains the 3' end of the gene for novel protein similar to rab11-binding protein (DKFZp686L20145), complete sequence Length = 117951 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 103050 ctttatatgtgtacatataat 103070
>emb|AL445495.5| Human DNA sequence from clone RP11-349P17 on chromosome 9 Contains part of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2) and a CpG island, complete sequence Length = 155837 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 23191 tcgctctcgctctcgctctcc 23211
>emb|AL033520.16|HS349A12 Human DNA sequence from clone RP3-349A12 on chromosome 6p21.31-22.2 Contains the 3' end of gene FLJ20302, the TAF11 gene for TAF11 RNA polymerase II (TATA box binding protein (TBP)-associated factor, 28 kD), the 5' end of gene KIAA0229 for novel Ank, SAM (Sterile alpha motif) and Phosphotyrosine interaction (PTB/PID) domain containing protein (KIAA0229) and a CpG island, complete sequence Length = 132948 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 417 ctgcggccaagagttcgagac 437 ||||||||||||||||||||| Sbjct: 73457 ctgcggccaagagttcgagac 73437
>gb|AC008471.7| Homo sapiens chromosome 5 clone CTC-366N20, complete sequence Length = 152116 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 594 cattggttggttcattccttt 614 ||||||||||||||||||||| Sbjct: 32519 cattggttggttcattccttt 32499
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 319 cgccacgggctcgcgctcgcc 339 ||||||||||||||||||||| Sbjct: 8922536 cgccacgggctcgcgctcgcc 8922556
>gb|AC010429.6|AC010429 Homo sapiens chromosome 5 clone CTD-2199L14, complete sequence Length = 133769 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 594 cattggttggttcattccttt 614 ||||||||||||||||||||| Sbjct: 55686 cattggttggttcattccttt 55706
>emb|BX538087.1|HSM806271 Homo sapiens mRNA; cDNA DKFZp686F0572 (from clone DKFZp686F0572); complete cds Length = 4078 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3705 ctttatatgtgtacatataat 3725
>emb|BX537578.1|HSM806222 Homo sapiens mRNA; cDNA DKFZp686L20145 (from clone DKFZp686L20145) Length = 4143 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3738 ctttatatgtgtacatataat 3758
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 68621 ctctcgctctcgctctccctc 68641
>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the 3' end of the Acac gene for acetyl-Coenzyme A carboxylase, complete sequence Length = 187803 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 165267 ctctcgctctcgctctccctc 165287
>gb|AF252539.1|AF252539 Leishmania mexicana amazonensis extrachromosomal element ICAM-like surface protein and ribonucleotide reductase small subunit M2 genes, complete cds Length = 8406 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 2609 ctctcgctctcgctctccctc 2629
>gb|AC155723.6| Mus musculus 6 BAC RP24-131B7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183349 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 140627 ctctcgctctcgctctccctc 140607
>gb|U00234.1|U00234 Ovis aries breed Romney DR beta-chain antigen binding domain, MHC class II DRB (Ovar-DRB31) gene, partial cds Length = 473 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 421 tcgctctcgctctcgctctcc 401
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 80644 tcgctctcgctctcgctctctctcg 80668
>emb|BX511218.9| Zebrafish DNA sequence from clone DKEY-37K14 in linkage group 17, complete sequence Length = 152316 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ttctgtcgctctcgctctcgctctc 173 |||| |||||||||||||||||||| Sbjct: 49317 ttctctcgctctcgctctcgctctc 49341
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 25854 ctctcgctctcgctctccctc 25834
>dbj|AK120851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023M23, full insert sequence Length = 2625 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 142 ctctcgctctcgctctccctc 162
>gb|AC026184.3|AC026184 Homo sapiens chromosome 3 clone RP11-291P21 map 3p, complete sequence Length = 179563 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 627 ataatgatataaattaagtatgatg 651 ||||||||||||| ||||||||||| Sbjct: 143976 ataatgatataaaataagtatgatg 143952
>gb|AC018504.4|AC018504 Homo sapiens chromosome 3 clone RP11-53E12 map 3p, complete sequence Length = 178133 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 627 ataatgatataaattaagtatgatg 651 ||||||||||||| ||||||||||| Sbjct: 157157 ataatgatataaaataagtatgatg 157133
>emb|BX648150.1|HSM808297 Homo sapiens mRNA; cDNA DKFZp686J0576 (from clone DKFZp686J0576) Length = 4070 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3703 ctttatatgtgtacatataat 3723
>emb|AL772132.6| Zebrafish DNA sequence from clone CH211-196N11, complete sequence Length = 205802 Score = 42.1 bits (21), Expect = 2.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 149 ttctgtcgctctcgctctcgctctccctc 177 |||| |||||||||||||| ||||||||| Sbjct: 126737 ttctctcgctctcgctctctctctccctc 126765
>gb|AC138277.16| Mus musculus chromosome 1, clone RP23-67I1, complete sequence Length = 216155 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctcc 174 ||||||||||||||||||||| Sbjct: 80644 tcgctctcgctctcgctctcc 80664
>gb|U07696.1|MRU07696 Rhizomucor circinelloides f. lusitanicus ATCC 1216b putative transcription factor (MTF1) gene, complete cds Length = 1945 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 152 tgtcgctctcgctctcgctct 172 ||||||||||||||||||||| Sbjct: 476 tgtcgctctcgctctcgctct 456
>emb|AL833605.1|HSM804918 Homo sapiens mRNA; cDNA DKFZp686K0767 (from clone DKFZp686K0767) Length = 4078 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3704 ctttatatgtgtacatataat 3724
>gb|AC172027.4| Mus musculus BAC RP24-219P17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185679 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 ctctcgctctcgctctccctc 177 ||||||||||||||||||||| Sbjct: 52764 ctctcgctctcgctctccctc 52744
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 3251 tcgctctcgctctcgctctctctcg 3275
>emb|AJ414528.1|HSA414528 Homo sapiens promoter region, HOXB7 gene Length = 1901 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tcgctctcgctctcgctctccctcg 178 |||||||||||||||||||| |||| Sbjct: 98 tcgctctcgctctcgctctctctcg 122
>ref|NM_019045.3| Homo sapiens WD repeat domain 44 (WDR44), mRNA Length = 4154 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 611 ctttatatgtgtacatataat 631 ||||||||||||||||||||| Sbjct: 3757 ctttatatgtgtacatataat 3777
>gb|AC026204.5| Homo sapiens chromosome 3 clone RP11-590A20 map 3p, complete sequence Length = 171061 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 627 ataatgatataaattaagtatgatg 651 ||||||||||||| ||||||||||| Sbjct: 41722 ataatgatataaaataagtatgatg 41698 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 93,088,119 Number of extensions: 5676553 Number of successful extensions: 136678 Number of sequences better than 10.0: 189 Number of HSP's gapped: 136615 Number of HSP's successfully gapped: 254 Length of query: 682 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 660 Effective length of database: 18,508,616,841 Effective search space: 12215687115060 Effective search space used: 12215687115060 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
