Clone Name | FLbaf100c08 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001055285.1| Oryza sativa (japonica cultivar-group) Os03g0115200 (Os03g0115200) mRNA, complete cds Length = 956 Score = 763 bits (385), Expect = 0.0 Identities = 562/621 (90%) Strand = Plus / Plus Query: 129 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 188 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 166 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 225 Query: 189 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgctttgcg 248 ||||||||||||||| ||||||||| | | ||||| | |||||||| ||||||||| ||| Sbjct: 226 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 285 Query: 249 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 308 ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 286 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 345 Query: 309 atccgcatgaacctcaaggcaaaaagggttgagttgaaaacaaggcatgatacaccagat 368 |||||||||||||| ||||||| |||||| ||| |||||||||| || || ||||| || Sbjct: 346 atccgcatgaaccttaaggcaagaagggtggagctgaaaacaagacaagacacacctgac 405 Query: 369 gtgagcaaccttcagaagtgtgcggactttgtgcatgcttttatgcttggatttgacatt 428 ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 406 gtgagcaaccttcagaagtgtgcagacttcgtacatgcttttatgcttggttttgacatc 465 Query: 429 gctgatggcgttgccttgcttcgtcttgatgacctgtatgtggattcctttgagatcaag 488 || |||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 466 gccgatgctgttgcgctgctccgtctcgatgacctgtatgtggattcctttgagatcaag 525 Query: 489 gatgtgaagacacttcggggggagcatctgtcgcgtgccattggccgcctatcgggaaaa 548 || ||||||||||| || || ||||||||||| ||||| ||||||||| | || |||||| Sbjct: 526 gacgtgaagacactccgaggagagcatctgtcacgtgctattggccgcttgtcaggaaaa 585 Query: 549 ggaggcaagaccaaatatgccatcgagaactctaccaggactcgcatagttattgctgat 608 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 586 ggaggcaagaccaaatatgccatcgagaattctacgaggactcgcatagttatcgctgat 645 Query: 609 acgaagatccacatacttggctcttttgttaacatcaaggttgccagggattcactctgt 668 ||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 646 acgaagatccatatacttggatcctttgttaacatcaaggttgctcgggattcactctgt 705 Query: 669 agtcttatcttaggttctcctgccggcaaggtctattctaagcttagggctgtatctgct 728 ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| Sbjct: 706 agtcttatcttaggttctcctgcaggcaaagtctattctaagctaagggctgtttctgct 765 Query: 729 aggttggcagaaaggtattag 749 ||||| ||||||||||||||| Sbjct: 766 aggttagcagaaaggtattag 786 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 773 gttgcggttttggcctcgtaagttgttgtatctgcagatttgtgt 817 ||||| ||||||||||||||| |||||||| || ||||||||| Sbjct: 802 gttgcagttttggcctcgtaatatgttgtattggctgatttgtgt 846
>dbj|AK071287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088J06, full insert sequence Length = 958 Score = 755 bits (381), Expect = 0.0 Identities = 561/621 (90%) Strand = Plus / Plus Query: 129 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 188 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 168 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 227 Query: 189 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgctttgcg 248 ||||||||||||||| ||||||||| | | ||||| | |||||||| ||||||||| ||| Sbjct: 228 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 287 Query: 249 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 308 ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 288 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 347 Query: 309 atccgcatgaacctcaaggcaaaaagggttgagttgaaaacaaggcatgatacaccagat 368 |||||||||||||| ||||||| |||||| ||| |||||||||| || || ||||| || Sbjct: 348 atccgcatgaaccttaaggcaagaagggtggagctgaaaacaagacaagacacacctgac 407 Query: 369 gtgagcaaccttcagaagtgtgcggactttgtgcatgcttttatgcttggatttgacatt 428 ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 408 gtgagcaaccttcagaagtgtgcagacttcgtacatgcttttatgcttggttttgacatc 467 Query: 429 gctgatggcgttgccttgcttcgtcttgatgacctgtatgtggattcctttgagatcaag 488 || |||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 468 gccgatgctgttgcgctgctccgtctcgatgacctgtatgtggattcctttgagatcaag 527 Query: 489 gatgtgaagacacttcggggggagcatctgtcgcgtgccattggccgcctatcgggaaaa 548 || ||||||||||| || || ||||||||||| ||||| ||||||||| | || |||||| Sbjct: 528 gacgtgaagacactccgaggagagcatctgtcacgtgctattggccgcttgtcaggaaaa 587 Query: 549 ggaggcaagaccaaatatgccatcgagaactctaccaggactcgcatagttattgctgat 608 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct: 588 ggaggcaagaccaaatatgccatcgagaattctacgaggactcgcatagttatcgctgat 647 Query: 609 acgaagatccacatacttggctcttttgttaacatcaaggttgccagggattcactctgt 668 ||||||||||| |||||||| || ||||||||||||||||||| |||||||||||||| Sbjct: 648 acgaagatccatatacttggatcccttgttaacatcaaggttgctcgggattcactctgt 707 Query: 669 agtcttatcttaggttctcctgccggcaaggtctattctaagcttagggctgtatctgct 728 ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||| Sbjct: 708 agtcttatcttaggttctcctgcaggcaaagtctattctaagctaagggctgtttctgct 767 Query: 729 aggttggcagaaaggtattag 749 ||||| ||||||||||||||| Sbjct: 768 aggttagcagaaaggtattag 788 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 773 gttgcggttttggcctcgtaagttgttgtatctgcagatttgtgt 817 ||||| ||||||||||||||| |||||||| || ||||||||| Sbjct: 804 gttgcagttttggcctcgtaatatgttgtattggctgatttgtgt 848
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 509 bits (257), Expect = e-141 Identities = 383/425 (90%) Strand = Plus / Minus Query: 325 aggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcaga 384 |||||| |||||| ||| |||||||||| || || ||||| || |||||||||||||||| Sbjct: 836771 aggcaagaagggtggagctgaaaacaagacaagacacacctgacgtgagcaaccttcaga 836712 Query: 385 agtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcct 444 ||||||| ||||| || ||||||||||||||||| |||||||| || |||| ||||| Sbjct: 836711 agtgtgcagacttcgtacatgcttttatgcttggttttgacatcgccgatgctgttgcgc 836652 Query: 445 tgcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttc 504 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 836651 tgctccgtctcgatgacctgtatgtggattcctttgagatcaaggacgtgaagacactcc 836592 Query: 505 ggggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaat 564 | || ||||||||||| ||||| ||||||||| | || |||||||||||||||||||||| Sbjct: 836591 gaggagagcatctgtcacgtgctattggccgcttgtcaggaaaaggaggcaagaccaaat 836532 Query: 565 atgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatac 624 ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 836531 atgccatcgagaattctacgaggactcgcatagttatcgctgatacgaagatccatatac 836472 Query: 625 ttggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggtt 684 |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 836471 ttggatcctttgttaacatcaaggttgctcgggattcactctgtagtcttatcttaggtt 836412 Query: 685 ctcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggt 744 ||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 836411 ctcctgcaggcaaagtctattctaagctaagggctgtttctgctaggttagcagaaaggt 836352 Query: 745 attag 749 ||||| Sbjct: 836351 attag 836347 Score = 260 bits (131), Expect = 8e-66 Identities = 182/199 (91%) Strand = Plus / Minus Query: 129 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 188 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 837937 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 837878 Query: 189 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgctttgcg 248 ||||||||||||||| ||||||||| | | ||||| | |||||||| ||||||||| ||| Sbjct: 837877 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 837818 Query: 249 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 308 ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 837817 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 837758 Query: 309 atccgcatgaacctcaagg 327 |||||||||||||| |||| Sbjct: 837757 atccgcatgaaccttaagg 837739 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 773 gttgcggttttggcctcgtaagttgttgtatctgcagatttgtgt 817 ||||| ||||||||||||||| |||||||| || ||||||||| Sbjct: 836331 gttgcagttttggcctcgtaatatgttgtattggctgatttgtgt 836287
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 509 bits (257), Expect = e-141 Identities = 383/425 (90%) Strand = Plus / Minus Query: 325 aggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcaga 384 |||||| |||||| ||| |||||||||| || || ||||| || |||||||||||||||| Sbjct: 132318 aggcaagaagggtggagctgaaaacaagacaagacacacctgacgtgagcaaccttcaga 132259 Query: 385 agtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcct 444 ||||||| ||||| || ||||||||||||||||| |||||||| || |||| ||||| Sbjct: 132258 agtgtgcagacttcgtacatgcttttatgcttggttttgacatcgccgatgctgttgcgc 132199 Query: 445 tgcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttc 504 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 132198 tgctccgtctcgatgacctgtatgtggattcctttgagatcaaggacgtgaagacactcc 132139 Query: 505 ggggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaat 564 | || ||||||||||| ||||| ||||||||| | || |||||||||||||||||||||| Sbjct: 132138 gaggagagcatctgtcacgtgctattggccgcttgtcaggaaaaggaggcaagaccaaat 132079 Query: 565 atgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatac 624 ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| |||| Sbjct: 132078 atgccatcgagaattctacgaggactcgcatagttatcgctgatacgaagatccatatac 132019 Query: 625 ttggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggtt 684 |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132018 ttggatcctttgttaacatcaaggttgctcgggattcactctgtagtcttatcttaggtt 131959 Query: 685 ctcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggt 744 ||||||| ||||| |||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 131958 ctcctgcaggcaaagtctattctaagctaagggctgtttctgctaggttagcagaaaggt 131899 Query: 745 attag 749 ||||| Sbjct: 131898 attag 131894 Score = 260 bits (131), Expect = 8e-66 Identities = 182/199 (91%) Strand = Plus / Minus Query: 129 atggcggtggacgcggccggcggcgtggagaagccgcggttcgacgctctgatgccaagc 188 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||| ||| Sbjct: 133484 atggcggtggacgcggctggcggcgtggagaagccgcggttcgaggcgctgatgccgagc 133425 Query: 189 gagatgagcggcgggcggccacagtaccgcaaggtccaggtgccgccgcaccgctttgcg 248 ||||||||||||||| ||||||||| | | ||||| | |||||||| ||||||||| ||| Sbjct: 133424 gagatgagcggcgggaggccacagttcaggaaggtgccggtgccgcagcaccgcttcgcg 133365 Query: 249 ccgctgaagaaggcgtggttggatatctacacccctgtctacgagcacatgaaggtcgac 308 ||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 133364 ccgctcaagaaggcgtggatggatatctacacccccgtctacgagcacatgaagatcgac 133305 Query: 309 atccgcatgaacctcaagg 327 |||||||||||||| |||| Sbjct: 133304 atccgcatgaaccttaagg 133286 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 773 gttgcggttttggcctcgtaagttgttgtatctgcagatttgtgt 817 ||||| ||||||||||||||| |||||||| || ||||||||| Sbjct: 131878 gttgcagttttggcctcgtaatatgttgtattggctgatttgtgt 131834
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 484 bits (244), Expect = e-133 Identities = 379/424 (89%) Strand = Plus / Minus Query: 325 aggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcaga 384 |||||| |||||| ||| | ||||||||||| || ||||||||||||||||| ||||||| Sbjct: 33476283 aggcaagaagggtggagctaaaaacaaggcaagacacaccagatgtgagcaatcttcaga 33476224 Query: 385 agtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcct 444 ||||||| ||||| ||||||||||||||||||||||||||||| || |||| |||||| | Sbjct: 33476223 agtgtgcagacttcgtgcatgcttttatgcttggatttgacatcgcagatgccgttgcat 33476164 Query: 445 tgcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttc 504 |||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||| | Sbjct: 33476163 tgctccgccttgatgacttgtatgtggattccttcgagatcaaggatgtgaagacactcc 33476104 Query: 505 ggggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaat 564 |||| ||||||||||| ||||| |||||||| | || || ||||||||||||||||||| Sbjct: 33476103 ggggtgagcatctgtcacgtgctattggccgtttgtcagggaaaggaggcaagaccaaat 33476044 Query: 565 atgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatac 624 | ||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 33476043 acgccattgagaattctaccaggactcgcatagttattgctgacacaaagatccacatac 33475984 Query: 625 ttggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggtt 684 |||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 33475983 ttggatcctttgttaacatcaaggttgctcgggattcactctgtagtctcatcttaggtt 33475924 Query: 685 ctcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggt 744 ||||||| ||||| || ||||| ||||| ||||| || ||||| |||||||| ||||||| Sbjct: 33475923 ctcctgctggcaaagtgtattcaaagctaagggccgtttctgccaggttggctgaaaggt 33475864 Query: 745 atta 748 |||| Sbjct: 33475863 atta 33475860 Score = 196 bits (99), Expect = 1e-46 Identities = 156/175 (89%) Strand = Plus / Minus Query: 153 gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 212 |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||| Sbjct: 33477381 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 33477322 Query: 213 taccgcaaggtccaggtgccgccgcaccgctttgcgccgctgaagaaggcgtggttggat 272 | ||| ||||| | |||||||| ||||||||| || |||||||||||||||||| |||| Sbjct: 33477321 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 33477262 Query: 273 atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacctcaagg 327 |||||||| || |||||||||||||||||| ||||||| ||||||||||| |||| Sbjct: 33477261 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacctgaagg 33477207
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 484 bits (244), Expect = e-133 Identities = 379/424 (89%) Strand = Plus / Minus Query: 325 aggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcaga 384 |||||| |||||| ||| | ||||||||||| || ||||||||||||||||| ||||||| Sbjct: 21480 aggcaagaagggtggagctaaaaacaaggcaagacacaccagatgtgagcaatcttcaga 21421 Query: 385 agtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcct 444 ||||||| ||||| ||||||||||||||||||||||||||||| || |||| |||||| | Sbjct: 21420 agtgtgcagacttcgtgcatgcttttatgcttggatttgacatcgcagatgccgttgcat 21361 Query: 445 tgcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttc 504 |||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||| | Sbjct: 21360 tgctccgccttgatgacttgtatgtggattccttcgagatcaaggatgtgaagacactcc 21301 Query: 505 ggggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaat 564 |||| ||||||||||| ||||| |||||||| | || || ||||||||||||||||||| Sbjct: 21300 ggggtgagcatctgtcacgtgctattggccgtttgtcagggaaaggaggcaagaccaaat 21241 Query: 565 atgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatac 624 | ||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 21240 acgccattgagaattctaccaggactcgcatagttattgctgacacaaagatccacatac 21181 Query: 625 ttggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggtt 684 |||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 21180 ttggatcctttgttaacatcaaggttgctcgggattcactctgtagtctcatcttaggtt 21121 Query: 685 ctcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggt 744 ||||||| ||||| || ||||| ||||| ||||| || ||||| |||||||| ||||||| Sbjct: 21120 ctcctgctggcaaagtgtattcaaagctaagggccgtttctgccaggttggctgaaaggt 21061 Query: 745 atta 748 |||| Sbjct: 21060 atta 21057 Score = 196 bits (99), Expect = 1e-46 Identities = 156/175 (89%) Strand = Plus / Minus Query: 153 gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 212 |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||| Sbjct: 22578 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 22519 Query: 213 taccgcaaggtccaggtgccgccgcaccgctttgcgccgctgaagaaggcgtggttggat 272 | ||| ||||| | |||||||| ||||||||| || |||||||||||||||||| |||| Sbjct: 22518 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 22459 Query: 273 atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacctcaagg 327 |||||||| || |||||||||||||||||| ||||||| ||||||||||| |||| Sbjct: 22458 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacctgaagg 22404
>dbj|AP003345.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415A04 Length = 160669 Score = 484 bits (244), Expect = e-133 Identities = 379/424 (89%) Strand = Plus / Minus Query: 325 aggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcaga 384 |||||| |||||| ||| | ||||||||||| || ||||||||||||||||| ||||||| Sbjct: 152449 aggcaagaagggtggagctaaaaacaaggcaagacacaccagatgtgagcaatcttcaga 152390 Query: 385 agtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcct 444 ||||||| ||||| ||||||||||||||||||||||||||||| || |||| |||||| | Sbjct: 152389 agtgtgcagacttcgtgcatgcttttatgcttggatttgacatcgcagatgccgttgcat 152330 Query: 445 tgcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttc 504 |||| || ||||||||| |||||||||||||||| ||||||||||||||||||||||| | Sbjct: 152329 tgctccgccttgatgacttgtatgtggattccttcgagatcaaggatgtgaagacactcc 152270 Query: 505 ggggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaat 564 |||| ||||||||||| ||||| |||||||| | || || ||||||||||||||||||| Sbjct: 152269 ggggtgagcatctgtcacgtgctattggccgtttgtcagggaaaggaggcaagaccaaat 152210 Query: 565 atgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatac 624 | ||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| Sbjct: 152209 acgccattgagaattctaccaggactcgcatagttattgctgacacaaagatccacatac 152150 Query: 625 ttggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggtt 684 |||| || |||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 152149 ttggatcctttgttaacatcaaggttgctcgggattcactctgtagtctcatcttaggtt 152090 Query: 685 ctcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggt 744 ||||||| ||||| || ||||| ||||| ||||| || ||||| |||||||| ||||||| Sbjct: 152089 ctcctgctggcaaagtgtattcaaagctaagggccgtttctgccaggttggctgaaaggt 152030 Query: 745 atta 748 |||| Sbjct: 152029 atta 152026 Score = 196 bits (99), Expect = 1e-46 Identities = 156/175 (89%) Strand = Plus / Minus Query: 153 gtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcggccacag 212 |||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||| Sbjct: 153547 gtggagaagccgcggttcgaggcgctgatgccgagcgagatgagcggcgggaggccccag 153488 Query: 213 taccgcaaggtccaggtgccgccgcaccgctttgcgccgctgaagaaggcgtggttggat 272 | ||| ||||| | |||||||| ||||||||| || |||||||||||||||||| |||| Sbjct: 153487 ttccggaaggtgccggtgccgcagcaccgcttcgctccgctgaagaaggcgtggatggac 153428 Query: 273 atctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacctcaagg 327 |||||||| || |||||||||||||||||| ||||||| ||||||||||| |||| Sbjct: 153427 atctacacgcccgtctacgagcacatgaagatcgacatacgcatgaacctgaagg 153373
>gb|DQ245200.1| Zea mays clone 13727 mRNA sequence Length = 896 Score = 474 bits (239), Expect = e-130 Identities = 514/603 (85%), Gaps = 2/603 (0%) Strand = Plus / Plus Query: 147 ggcggcgtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcgg 206 |||| |||||| |||||||||||||| ||||||| ||| | ||||||||||||||| || Sbjct: 160 ggcgccgtggacaagccgcggttcgatgctctgacgccgaatgagatgagcggcgggagg 219 Query: 207 ccacagtaccgcaaggtccaggtgccgccgcaccgctttgcgccgctgaaga-aggcgtg 265 || |||| ||| || || | || |||| |||||| || |||||||| ||| | || || Sbjct: 220 ccccagttccggaaagtgcccgtcccgcagcaccggttcgcgccgctcaagcgatgc-tg 278 Query: 266 gttggatatctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacctcaa 325 | |||| |||||||| || || |||||||| |||||| |||| || |||||||| ||||| Sbjct: 279 gatggaaatctacacacccgtatacgagcatatgaagatcgatatacgcatgaatctcaa 338 Query: 326 ggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcagaa 385 ||||| ||||| ||| | || |||||||| || ||||| || ||||||||||||||||| Sbjct: 339 ggcaaggagggtggagctaaagacaaggcaagacacaccggacgtgagcaaccttcagaa 398 Query: 386 gtgtgcggactttgtgcatgcttttatgcttggatttgacattgctgatggcgttgcctt 445 |||||||||||||||||||||||||||||||| || ||||||||||||| ||| ||||| Sbjct: 399 atgtgcggactttgtgcatgcttttatgcttgggttcgacattgctgatgccgtcgcctt 458 Query: 446 gcttcgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttcg 505 ||| ||||||||||||||||||||||| ||||| || |||||||| |||||||| || || Sbjct: 459 gctgcgtcttgatgacctgtatgtggactccttcgaaatcaaggacgtgaagaccctgcg 518 Query: 506 gggggagcatctgtcgcgtgccattggccgcctatcgggaaaaggaggcaagaccaaata 565 |||||||||||||||||||| |||||||||||||| || ||||||||||||||||| || Sbjct: 519 aggggagcatctgtcgcgtgctattggccgcctatcagggaaaggaggcaagaccaagta 578 Query: 566 tgccatcgagaactctaccaggactcgcatagttattgctgatacgaagatccacatact 625 ||||| |||| |||||||||||| ||||| ||||| |||||||| |||||||| ||||| Sbjct: 579 cgccattgagagctctaccaggacccgcatcgttatcgctgatacaaagatccatatact 638 Query: 626 tggctcttttgttaacatcaaggttgccagggattcactctgtagtcttatcttaggttc 685 ||| || ||||||||||||||||| || ||||||| || || ||| | ||||| ||||| Sbjct: 639 tggatcctttgttaacatcaaggtcgcgcgggattcgctttgcagtttcatcttgggttc 698 Query: 686 tcctgccggcaaggtctattctaagcttagggctgtatctgctaggttggcagaaaggta 745 ||||| ||||| || |||| |||||| | ||||||||| ||||||||||| |||||||| Sbjct: 699 acctgctggcaaagtgtattttaagctaatggctgtatcagctaggttggcggaaaggta 758 Query: 746 tta 748 ||| Sbjct: 759 tta 761
>gb|AY110812.1| Zea mays CL13054_1 mRNA sequence Length = 596 Score = 321 bits (162), Expect = 3e-84 Identities = 285/326 (87%) Strand = Plus / Minus Query: 423 gacattgctgatggcgttgccttgcttcgtcttgatgacctgtatgtggattcctttgag 482 ||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 586 gacattgctgatgccgtcgccttgctgcgtcttgatgatctgtatgtggattcctttgag 527 Query: 483 atcaaggatgtgaagacacttcggggggagcatctgtcgcgtgccattggccgcctatcg 542 |||||||| |||||||| | || ||||||||||||||||| || ||||||||| |||| Sbjct: 526 atcaaggacgtgaagaccttgcgaggggagcatctgtcgcgcgctattggccgcttatca 467 Query: 543 ggaaaaggaggcaagaccaaatatgccatcgagaactctaccaggactcgcatagttatt 602 || ||||||||||||||||| || ||||| |||||||| |||||||| ||||| || || Sbjct: 466 gggaaaggaggcaagaccaagtacgccattgagaactcaaccaggacccgcatcgtcatc 407 Query: 603 gctgatacgaagatccacatacttggctcttttgttaacatcaaggttgccagggattca 662 |||||||| ||||||||||||||||| || || |||||||||||||| || |||||||| Sbjct: 406 gctgatacaaagatccacatacttggatccttcgttaacatcaaggtcgcgcgggattca 347 Query: 663 ctctgtagtcttatcttaggttctcctgccggcaaggtctattctaagcttagggctgta 722 || || ||||| ||||| ||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 346 ctttgcagtctcatcttgggttctcctgctggcaaagtgtattctaaactaagggctgta 287 Query: 723 tctgctaggttggcagaaaggtatta 748 || ||||||||||| | ||||||||| Sbjct: 286 tcagctaggttggcggtaaggtatta 261
>gb|AY344058.1| Sorghum bicolor partner of Nob1 mRNA, complete cds Length = 819 Score = 313 bits (158), Expect = 7e-82 Identities = 248/278 (89%) Strand = Plus / Plus Query: 471 gattcctttgagatcaaggatgtgaagacacttcggggggagcatctgtcgcgtgccatt 530 |||||||||||||||||||| |||||||| || || |||||||||||||||||||| ||| Sbjct: 421 gattcctttgagatcaaggacgtgaagaccctgcgaggggagcatctgtcgcgtgctatt 480 Query: 531 ggccgcctatcgggaaaaggaggcaagaccaaatatgccatcgagaactctaccaggact 590 ||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 481 ggccgcctatcagggaaaggaggcaagaccaagtatgccattgagaactctaccaggacc 540 Query: 591 cgcatagttattgctgatacgaagatccacatacttggctcttttgttaacatcaaggtt 650 ||||| ||||| |||||||| |||||||| |||||||| || |||||||||||||||||| Sbjct: 541 cgcatcgttatcgctgatacaaagatccatatacttggatcctttgttaacatcaaggtt 600 Query: 651 gccagggattcactctgtagtcttatcttaggttctcctgccggcaaggtctattctaag 710 || ||||||| || || ||||| ||||| ||||||||||| ||||| || ||||| ||| Sbjct: 601 gcgcgggattcgctttgcagtctcatcttgggttctcctgctggcaaagtgtattcgaag 660 Query: 711 cttagggctgtatctgctaggttggcagaaaggtatta 748 || ||||||||||| ||||||||||| ||||||||||| Sbjct: 661 ctaagggctgtatcagctaggttggcggaaaggtatta 698 Score = 214 bits (108), Expect = 4e-52 Identities = 233/272 (85%), Gaps = 2/272 (0%) Strand = Plus / Plus Query: 147 ggcggcgtggagaagccgcggttcgacgctctgatgccaagcgagatgagcggcgggcgg 206 |||| |||||||||||||| ||||| ||||||||||| || ||||||||||||||| || Sbjct: 151 ggcgccgtggagaagccgcaattcgatgctctgatgccgagtgagatgagcggcgggagg 210 Query: 207 ccacagtaccgcaaggtccaggtgccgccgcaccgctttgcgccgctgaaga-aggcgtg 265 || |||| ||| || || ||||||| |||||| || |||||||| ||| | || || Sbjct: 211 ccccagttccgaaaagtgaccgtgccgcagcaccggttcgcgccgctcaagcgatgc-tg 269 Query: 266 gttggatatctacacccctgtctacgagcacatgaaggtcgacatccgcatgaacctcaa 325 | |||| |||||||| || || ||||||||||||||| ||||||| |||||||||||||| Sbjct: 270 gatggaaatctacacgcccgtgtacgagcacatgaagatcgacatacgcatgaacctcaa 329 Query: 326 ggcaaaaagggttgagttgaaaacaaggcatgatacaccagatgtgagcaaccttcagaa 385 ||||| ||||| ||| | || ||||| || ||||||||||||||||||||||||||||| Sbjct: 330 ggcaaggagggtggagctaaagacaagacaagatacaccagatgtgagcaaccttcagaa 389 Query: 386 gtgtgcggactttgtgcatgcttttatgcttg 417 |||||| ||||||||||||||||||||||||| Sbjct: 390 gtgtgctgactttgtgcatgcttttatgcttg 421
>emb|CR931733.2| Medicago truncatula chromosome 5 clone mth2-38a4, COMPLETE SEQUENCE Length = 124746 Score = 60.0 bits (30), Expect = 2e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 456 gatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttcg 505 ||||| || ||||| || |||||||||||||||||||| ||||||||||| Sbjct: 53733 gatgaactctatgttgagtcctttgagatcaaggatgttaagacacttcg 53684
>gb|AC147712.17| Medicago truncatula clone mth2-34f1, complete sequence Length = 136410 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 450 cgtcttgatgacctgtatgtggattcctttgagatcaaggatgtgaagacacttcg 505 ||||| ||||| || ||||| || ||||||||||| |||||||| ||||||||||| Sbjct: 113942 cgtctggatgagctctatgttgagtcctttgagattaaggatgttaagacacttcg 113997
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 131 ggcggtggacgcggccggcggcgtg 155 ||||||||||||||||||||||||| Sbjct: 1710155 ggcggtggacgcggccggcggcgtg 1710179 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Minus Query: 131 ggcggtggacgcggccggcggcgtg 155 ||||||||||||||||||||||||| Sbjct: 4211491 ggcggtggacgcggccggcggcgtg 4211467
>gb|AF154661.1| Nicotiana tabacum clone PR52 mRNA sequence Length = 871 Score = 48.1 bits (24), Expect = 0.060 Identities = 45/52 (86%) Strand = Plus / Plus Query: 469 tggattcctttgagatcaaggatgtgaagacacttcggggggagcatctgtc 520 ||||||| |||||||| |||||||||||||| || || || |||||| |||| Sbjct: 434 tggattcgtttgagattaaggatgtgaagacgctgcgtggcgagcatttgtc 485 Score = 42.1 bits (21), Expect = 3.7 Identities = 54/65 (83%) Strand = Plus / Plus Query: 649 ttgccagggattcactctgtagtcttatcttaggttctcctgccggcaaggtctattcta 708 |||| |||||||| || ||||| ||||| | || |||||||| || ||||| ||||||| Sbjct: 614 ttgctagggattcgctttgtagccttattatggggtctcctgctggtaaggtttattcta 673 Query: 709 agctt 713 ||||| Sbjct: 674 agctt 678
>gb|CP000481.1| Acidothermus cellulolyticus 11B, complete genome Length = 2443540 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 147 ggcggcgtggagaagccgcggtt 169 ||||||||||||||||||||||| Sbjct: 641398 ggcggcgtggagaagccgcggtt 641420
>dbj|AK229503.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL17-07-B10 Length = 1271 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 861 tttgagatcaaggatgtgaagac 883
>ref|NM_112167.2| Arabidopsis thaliana nucleic acid binding (AT3G13230) mRNA, complete cds Length = 891 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 491 tttgagatcaaggatgtgaagac 513
>gb|BT015168.1| Arabidopsis thaliana At3g13230 gene, complete cds Length = 648 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 382 tttgagatcaaggatgtgaagac 404
>gb|BT008667.1| Arabidopsis thaliana clone RAFL17-07-B10 (R50354) mRNA, complete sequence Length = 1275 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 861 tttgagatcaaggatgtgaagac 883
>gb|AY089052.1| Arabidopsis thaliana clone 22588 mRNA, complete sequence Length = 867 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 490 tttgagatcaaggatgtgaagac 512
>dbj|AB024034.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11 Length = 86233 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 10967 tttgagatcaaggatgtgaagac 10989
>emb|BX825460.1|CNS0A50J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZE10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 828 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 477 tttgagatcaaggatgtgaagac 499 ||||||||||||||||||||||| Sbjct: 444 tttgagatcaaggatgtgaagac 466
>emb|CT485794.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 65324 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 tttgcgccgctgaagaaggcgt 264 |||||||||||||||||||||| Sbjct: 51607 tttgcgccgctgaagaaggcgt 51586
>emb|CT485669.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 108360 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Minus Query: 243 tttgcgccgctgaagaaggcgt 264 |||||||||||||||||||||| Sbjct: 15654 tttgcgccgctgaagaaggcgt 15633
>emb|CT485663.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 77142 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 tttgcgccgctgaagaaggcgt 264 |||||||||||||||||||||| Sbjct: 11871 tttgcgccgctgaagaaggcgt 11892
>emb|CT485653.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 48894 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 243 tttgcgccgctgaagaaggcgt 264 |||||||||||||||||||||| Sbjct: 7967 tttgcgccgctgaagaaggcgt 7988
>emb|CT828943.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z25, full insert sequence Length = 797 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 414 gcggtggacgcggccggcggcg 435
>emb|CT828942.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA234G19, full insert sequence Length = 935 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 548 gcggtggacgcggccggcggcg 569
>emb|CT828941.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA234F20, full insert sequence Length = 933 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 546 gcggtggacgcggccggcggcg 567
>emb|CT831327.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA213G04, full insert sequence Length = 1091 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 684 gcggtggacgcggccggcggcg 705
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.94 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 ctgccgccatggcggtggacgcggccggcg 150 ||||||||||||||||||| |||| ||||| Sbjct: 3492674 ctgccgccatggcggtggatgcggacggcg 3492645
>gb|AC159971.4| Mus musculus chromosome 5, clone RP23-263G19, complete sequence Length = 163375 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 ttggatttgacattgctgatgg 436 |||||||||||||||||||||| Sbjct: 150214 ttggatttgacattgctgatgg 150193
>gb|AC091723.3| Sus scrofa clone RP44-349L7, complete sequence Length = 76665 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 ttcctttgagatcaaggatgtg 494 |||||||||||||||||||||| Sbjct: 73915 ttcctttgagatcaaggatgtg 73936
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 18403610 gcggtggacgcggccggcggcg 18403631
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 118346 gcggtggacgcggccggcggcg 118367
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 65484 gcggtggacgcggccggcggcg 65505
>gb|AC091759.2| Sus scrofa clone RP44-484M10, complete sequence Length = 168703 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 ttcctttgagatcaaggatgtg 494 |||||||||||||||||||||| Sbjct: 25841 ttcctttgagatcaaggatgtg 25862
>gb|AC156592.2| Laccaria bicolor clone JGIAHZW-10X, complete sequence Length = 37070 Score = 44.1 bits (22), Expect = 0.94 Identities = 25/26 (96%) Strand = Plus / Minus Query: 471 gattcctttgagatcaaggatgtgaa 496 ||||| |||||||||||||||||||| Sbjct: 17334 gattcatttgagatcaaggatgtgaa 17309
>gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene, complete cds Length = 2757 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 gcggtggacgcggccggcggcg 153 |||||||||||||||||||||| Sbjct: 2341 gcggtggacgcggccggcggcg 2362
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.94 Identities = 28/30 (93%) Strand = Plus / Minus Query: 121 ctgccgccatggcggtggacgcggccggcg 150 ||||||||||||||||||| |||| ||||| Sbjct: 3488407 ctgccgccatggcggtggatgcggacggcg 3488378
>gb|AC109165.11| Mus musculus chromosome 5, clone RP23-30B3, complete sequence Length = 202377 Score = 44.1 bits (22), Expect = 0.94 Identities = 22/22 (100%) Strand = Plus / Plus Query: 415 ttggatttgacattgctgatgg 436 |||||||||||||||||||||| Sbjct: 172001 ttggatttgacattgctgatgg 172022
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 427 ttgctgatggcgttgccttgc 447 ||||||||||||||||||||| Sbjct: 106635 ttgctgatggcgttgccttgc 106615
>ref|NM_203890.1| Xenopus tropicalis ubiquilin 2 (ubqln2), mRNA gb|BC063190.1| Xenopus tropicalis ubiquilin 2, mRNA (cDNA clone MGC:75576 IMAGE:5379110), complete cds Length = 3130 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 cttggatttgacattgctgat 434 ||||||||||||||||||||| Sbjct: 1572 cttggatttgacattgctgat 1552
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 456 gatgacctgtatgtggattcctttgagatcaaggatgtgaagaca 500 |||||| ||||| | || || ||||||||||||||||| |||||| Sbjct: 1567300 gatgacttgtatcttgactcttttgagatcaaggatgtcaagaca 1567256
>gb|BC077987.1| Xenopus laevis ubiquilin 2, mRNA (cDNA clone MGC:81673 IMAGE:6864615), complete cds Length = 2594 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 cttggatttgacattgctgat 434 ||||||||||||||||||||| Sbjct: 1630 cttggatttgacattgctgat 1610
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gtgccgccgcaccgctttgcgccgc 252 ||||||||||||||||| ||||||| Sbjct: 3047703 gtgccgccgcaccgcttcgcgccgc 3047727
>gb|AC149237.1| Pan troglodytes chromosome X clone RP43-049A09 map human ortholog q28, complete sequence Length = 168371 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 906 ttccttgagacaatgatgtgc 926 ||||||||||||||||||||| Sbjct: 47507 ttccttgagacaatgatgtgc 47487
>ref|XM_534357.2| PREDICTED: Canis familiaris solute carrier family 23 (nucleobase transporters), member 2 (SLC23A2), mRNA Length = 2830 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 accaaatatgccatcgagaac 578 ||||||||||||||||||||| Sbjct: 1299 accaaatatgccatcgagaac 1279
>gb|AY231920.1| Drosophila yakuba clone yak-em_CG11738 mRNA sequence Length = 324 Score = 42.1 bits (21), Expect = 3.7 Identities = 63/77 (81%) Strand = Plus / Plus Query: 459 gacctgtatgtggattcctttgagatcaaggatgtgaagacacttcggggggagcatctg 518 ||||||| ||| || || || ||||||||||| |||||||| || || || || || | | Sbjct: 37 gacctgtttgtcgagtcgttcgagatcaaggacgtgaagactctgcgcggcgaccaccag 96 Query: 519 tcgcgtgccattggccg 535 ||||| ||||||||||| Sbjct: 97 tcgcgcgccattggccg 113
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gcgccgctgaagaaggcgtgg 266 ||||||||||||||||||||| Sbjct: 5887157 gcgccgctgaagaaggcgtgg 5887137
>emb|CT025388.2| Xenopus tropicalis finished cDNA, clone TGas087c05 Length = 3127 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 cttggatttgacattgctgat 434 ||||||||||||||||||||| Sbjct: 1534 cttggatttgacattgctgat 1514
>gb|AY264779.1| Canis familiaris SVCT2-like protein mRNA, partial cds Length = 763 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 accaaatatgccatcgagaac 578 ||||||||||||||||||||| Sbjct: 253 accaaatatgccatcgagaac 233
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 gtgccgccgcaccgctttgcgccgc 252 ||||||||||||||||| ||||||| Sbjct: 1408662 gtgccgccgcaccgcttcgcgccgc 1408638
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 228 gtgccgccgcaccgctttgcgccgc 252 ||||||||||||||||| ||||||| Sbjct: 1226469 gtgccgccgcaccgcttcgcgccgc 1226493
>emb|AL773510.5| Mouse DNA sequence from clone RP24-200F10 on chromosome 4 Contains a novel gene and a casein kinase II alpha 1 polypeptide (Csnk2a1) pseudogene, complete sequence Length = 134053 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 870 tctgtagtgatattcattgtg 890 ||||||||||||||||||||| Sbjct: 116520 tctgtagtgatattcattgtg 116540
>gb|AC006522.5| Homo sapiens X BAC GS1-234N3 (Genome Systems Human BAC Library) complete sequence Length = 34836 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 906 ttccttgagacaatgatgtgc 926 ||||||||||||||||||||| Sbjct: 22994 ttccttgagacaatgatgtgc 22974
>gb|AC015552.17| Homo sapiens X BAC RP11-62J14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 38675 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 906 ttccttgagacaatgatgtgc 926 ||||||||||||||||||||| Sbjct: 13663 ttccttgagacaatgatgtgc 13683
>ref|XM_566941.1| Cryptococcus neoformans var. neoformans JEC21 chaperone (CNA05860) partial mRNA Length = 965 Score = 42.1 bits (21), Expect = 3.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 456 gatgacctgtatgtggattcctttgagatcaaggatgtgaagaca 500 |||||| ||||| | || || ||||||||||||||||| |||||| Sbjct: 577 gatgacttgtatcttgactcttttgagatcaaggatgtcaagaca 621
>emb|AL844580.13| Mouse DNA sequence from clone RP23-367K9 on chromosome 2, complete sequence Length = 222380 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 874 tagtgatattcattgtgttct 894 ||||||||||||||||||||| Sbjct: 210891 tagtgatattcattgtgttct 210911
>gb|AF118561.1|AF118561 Oryctolagus cuniculus sodium-coupled ascorbic acid transporter SVCT2 mRNA, partial cds Length = 1236 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 accaaatatgccatcgagaac 578 ||||||||||||||||||||| Sbjct: 846 accaaatatgccatcgagaac 826
>ref|NM_214178.1| Sus scrofa solute carrier family 23 (nucleobase transporters), member 2 (SLC23A2), mRNA gb|AF058320.1|AF058320 Sus scrofa yolk sac permease-like molecule 2 (YSPL2) mRNA, complete cds Length = 1953 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 558 accaaatatgccatcgagaac 578 ||||||||||||||||||||| Sbjct: 1296 accaaatatgccatcgagaac 1276 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 154,699,821 Number of extensions: 7849114 Number of successful extensions: 163835 Number of sequences better than 10.0: 61 Number of HSP's gapped: 163835 Number of HSP's successfully gapped: 75 Length of query: 984 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 961 Effective length of database: 18,503,978,556 Effective search space: 17782323392316 Effective search space used: 17782323392316 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)