Clone Name | FLbaf100a02 |
---|---|
Clone Library Name | barley_pub |
>Q5PQR5:IMP4_RAT U3 small nucleolar ribonucleoprotein protein IMP4 - Rattus| norvegicus (Rat) Length = 291 Score = 303 bits (777), Expect = 8e-82 Identities = 154/289 (53%), Positives = 205/289 (70%), Gaps = 1/289 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR RLRREYLYRK+ E +R EKK RV+ ALEE + IPT ++ D Sbjct: 1 MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 D S +DDEY A + +PK+++TTSR+PS+ L F KELK+VFP +QRMNRG Sbjct: 61 DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +V +C+++ +TDL++VHEHRG P GLIV HLP GPTAYF L NVV RHDI D +G Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 177 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 MSEA PHLI F+++ G+R ++I+++LFPVPK DS R+ITFAN+DDYISFRHH+Y+K Sbjct: 178 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 236 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQ 982 ++++L EVGPRFEL+LY I+ GT++Q + A E+ PY NTA+K+ Sbjct: 237 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKR 285
>Q8VHZ7:IMP4_MOUSE U3 small nucleolar ribonucleoprotein protein IMP4 - Mus musculus| (Mouse) Length = 291 Score = 303 bits (777), Expect = 8e-82 Identities = 154/289 (53%), Positives = 205/289 (70%), Gaps = 1/289 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR RLRREYLYRK+ E +R EKK RV+ ALEE + IPT ++ D Sbjct: 1 MLRREARLRREYLYRKAREEAQRSVQEKKERVKRALEENQLIPTELRREALALQGSLEFD 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 D S +DDEY A + +PK+++TTSR+PS+ L F KELK+VFP +QRMNRG Sbjct: 61 DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +V +C+++ +TDL++VHEHRG P GLIV HLP GPTAYF L NVV RHDI D +G Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 177 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 MSEA PHLI F+++ G+R ++I+++LFPVPK DS R+ITFAN+DDYISFRHH+Y+K Sbjct: 178 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 236 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQ 982 ++++L EVGPRFEL+LY I+ GT++Q + A E+ PY NTA+K+ Sbjct: 237 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKR 285
>Q5R947:IMP4_PONPY U3 small nucleolar ribonucleoprotein protein IMP4 - Pongo pygmaeus| (Orangutan) Length = 291 Score = 303 bits (776), Expect = 1e-81 Identities = 153/289 (52%), Positives = 205/289 (70%), Gaps = 1/289 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR RLRREYLYRK+ E +R E+K R+R ALEE + IPT ++ D Sbjct: 1 MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 D S +DDEY A + +PK+++TTSR+PS+ L F KELK+VFP +QRMNRG Sbjct: 61 DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +V +C+++ +TDL++VHEHRG P GLIV HLP GPTAYF L NVV RHDI D +G Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 177 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 MSEA PHLI F+++ G+R ++I+++LFPVPK DS R+ITFAN+DDYISFRHH+Y+K Sbjct: 178 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 236 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQ 982 ++++L EVGPRFEL+LY I+ GT++Q + A E+ PY NTA+K+ Sbjct: 237 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKR 285
>Q96G21:IMP4_HUMAN U3 small nucleolar ribonucleoprotein protein IMP4 - Homo sapiens| (Human) Length = 291 Score = 303 bits (776), Expect = 1e-81 Identities = 153/289 (52%), Positives = 205/289 (70%), Gaps = 1/289 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR RLRREYLYRK+ E +R E+K R+R ALEE + IPT ++ D Sbjct: 1 MLRREARLRREYLYRKAREEAQRSAQERKERLRRALEENRLIPTELRREALALQGSLEFD 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 D S +DDEY A + +PK+++TTSR+PS+ L F KELK+VFP +QRMNRG Sbjct: 61 DAGGEGVTSHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +V +C+++ +TDL++VHEHRG P GLIV HLP GPTAYF L NVV RHDI D +G Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 177 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 MSEA PHLI F+++ G+R ++I+++LFPVPK DS R+ITFAN+DDYISFRHH+Y+K Sbjct: 178 TMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFANQDDYISFRHHVYKK- 236 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQ 982 ++++L EVGPRFEL+LY I+ GT++Q + A E+ PY NTA+K+ Sbjct: 237 TDHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTARKR 285
>Q0VD01:IMP4_BOVIN U3 small nucleolar ribonucleoprotein protein IMP4 - Bos taurus| (Bovine) Length = 291 Score = 301 bits (771), Expect = 4e-81 Identities = 152/289 (52%), Positives = 205/289 (70%), Gaps = 1/289 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR RLRREYLYRK+ E ER E+K +VR ALEE + IPT ++ D Sbjct: 1 MLRREARLRREYLYRKAREEAERTAQERKDKVRRALEENRLIPTELRREALALQGSLEFD 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 D + +DDEY A + +PK+++TTSR+PS+ L F KELK+VFP +QRMNRG Sbjct: 61 DAGGEGVTNHVDDEYRWAGVEDPKVMITTSRDPSSRLKMFAKELKLVFPGAQRMNRGRHE 120 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +V +C+++ +TDL++VHEHRG P GLIV HLP GPTAYF L NVV RHDI D +G Sbjct: 121 VGALVRACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYFTLCNVVMRHDIPD---LG 177 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 SEA PHLI+ F+++ G+R ++I+++LFPVPK DS+R+ITFAN+DDYISFRHH+Y+K Sbjct: 178 TASEAKPHLIMHGFSSRLGKRVSDILRYLFPVPKDDSRRVITFANQDDYISFRHHVYKK- 236 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQ 982 ++++L EVGPRFEL+LY I+ GT++Q + A E+ PY NTA K+ Sbjct: 237 TNHRNVELTEVGPRFELKLYMIRLGTLEQEATADVEWRWHPYTNTAHKR 285
>O62518:YHPK_CAEEL Brix domain-containing protein ZK795.3 - Caenorhabditis elegans| Length = 292 Score = 283 bits (724), Expect = 1e-75 Identities = 144/294 (48%), Positives = 196/294 (66%), Gaps = 1/294 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 M+RR RLRRE+++RKSLE K++ EK+ ++R ALE I D Sbjct: 1 MIRRENRLRREFIFRKSLEEKQKSLEEKREKIRNALENNTKIDYNLRKDAIELAKGSDWG 60 Query: 299 DQDRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 Q D EY A ++PKI++TTSR+PS+ L F KE+K++FPN+QR+NRG Sbjct: 61 GQQYET-----DSEYRWAGAQDPKIVITTSRDPSSRLKMFAKEMKLIFPNAQRINRGHYD 115 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + ++V++ ++ + TDLI+ E RG PDG++VCHLP GPTA+F + NVV RHDI + G Sbjct: 116 VKQVVQASKAQDSTDLIIFTETRGNPDGMLVCHLPFGPTAFFSMANVVMRHDIPN---CG 172 Query: 659 KMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDDYISFRHHIYEKH 838 MSE YPHLI DN +K G R I+KHLFPVPKPDSKR+ITF+N +DYISFRHH+Y K Sbjct: 173 TMSEQYPHLIFDNLNSKLGHRFTTILKHLFPVPKPDSKRIITFSNSEDYISFRHHVY-KT 231 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQ-SEAQNEFVLRPYMNTAKKQKSLGV 997 ++L E GPRFEL+ YQIK GT++ + A++E+VLR Y NTA+K+ L + Sbjct: 232 ENDGEVELTEAGPRFELKPYQIKLGTLETLAAAEDEWVLRSYTNTARKRTFLSI 285
>Q6C804:IMP4_YARLI U3 small nucleolar ribonucleoprotein protein IMP4 - Yarrowia| lipolytica (Candida lipolytica) Length = 283 Score = 260 bits (664), Expect = 1e-68 Identities = 139/294 (47%), Positives = 191/294 (64%), Gaps = 3/294 (1%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXI-DL 295 M+RR R RREYLYRKSL+ +E +K+++++ AL GKP+P D Sbjct: 1 MIRRQARERREYLYRKSLQLQEATKIQKRQQLKAALASGKPLPKDVADDEELRKTIAYDE 60 Query: 296 DDQDRAVPRSIIDDEYAGAT-LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGG 472 QD IDDEY+ + + +PK+++TTSR+PS L+QF KE+K++FP S R+NRGG Sbjct: 61 SVQDE------IDDEYSAMSGITDPKVVVTTSRDPSTRLSQFAKEVKLLFPTSIRLNRGG 114 Query: 473 QVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKA 652 V+ +V +C++ +DLI++HEHRG P + V H P GPTAYF L NVV RHD+ D Sbjct: 115 TVLPSLVSACKTSASSDLIVLHEHRGVPTAMTVSHFPHGPTAYFSLHNVVLRHDLPD--- 171 Query: 653 MGKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRHHIY 829 G MSE +PHLI DNFTT G+R I+KHLFP K DS R+ITFANR D+IS R H+Y Sbjct: 172 TGNMSEVHPHLIFDNFTTDLGKRVVQILKHLFPPGVKKDSARVITFANRGDFISVRQHVY 231 Query: 830 EKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQKSL 991 K + ++L EVGPRFE+RLY ++ GT++ +A E+ + +M TA K+ L Sbjct: 232 VK--TREGVELAEVGPRFEMRLYDLRLGTLENKDADVEWRMHGFMRTANKKDYL 283
>O13823:IMP4_SCHPO U3 small nucleolar ribonucleoprotein protein imp4 -| Schizosaccharomyces pombe (Fission yeast) Length = 289 Score = 259 bits (662), Expect = 2e-68 Identities = 138/285 (48%), Positives = 187/285 (65%), Gaps = 4/285 (1%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR R RR+++Y+++ E +E + EK+R +R+ALE K + Sbjct: 1 MLRRAVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDY--KY 58 Query: 299 DQDRAVPRSI---IDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRG 469 D+ RA +DDEY REPK+L+TTSR PS+ L QF KE++++ PNS R+NRG Sbjct: 59 DESRATQEETETNLDDEYHRLGEREPKVLVTTSREPSSRLAQFAKEVRLLIPNSYRLNRG 118 Query: 470 GQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRK 649 V+ +VE+ R+++ITD++++HEHRG PDGL++ HLP GPT F L NVV RHDI + Sbjct: 119 NIVVGSLVEAARANDITDIVILHEHRGIPDGLVISHLPYGPTLSFSLHNVVLRHDIPN-- 176 Query: 650 AMGKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRHHI 826 G MSEAYPHLI +N T+K G+R + LFP PK + R++TFAN DDYISFRHHI Sbjct: 177 -TGTMSEAYPHLIFENLTSKLGKRVKTALSALFPPDPKDTTPRVVTFANTDDYISFRHHI 235 Query: 827 YEKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPY 961 Y K GPK I L E GPRFE++L++I GTVD +A E+ L+PY Sbjct: 236 YAK-TGPKQIILSEAGPRFEMKLFEITLGTVDMVDADVEWKLKPY 279
>Q6BYD9:IMP4_DEBHA U3 small nucleolar ribonucleoprotein protein IMP4 - Debaryomyces| hansenii (Yeast) (Torulaspora hansenii) Length = 284 Score = 256 bits (653), Expect = 2e-67 Identities = 134/294 (45%), Positives = 194/294 (65%), Gaps = 2/294 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 M+R+ R RREYLYRKSLE +E EK+++++ AL GKP+ I D Sbjct: 1 MIRKQARERREYLYRKSLELQESSLTEKRQQLKAALASGKPLSKELAEDKELQKDFI-YD 59 Query: 299 DQDRAVPRSIIDDEYAGAT-LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQ 475 + ++ IDDEY + + EPK+L+TTSRNPS L QF KE+K++FPNS ++NRG Sbjct: 60 ESEQTE----IDDEYLALSGISEPKVLITTSRNPSVKLLQFSKEIKLMFPNSIKLNRGNY 115 Query: 476 VISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAM 655 VI+++V +C+ +I+DLI++HEHRG P L + H P GP+ F L NV RHD+ + + Sbjct: 116 VITDLVATCQRVQISDLIILHEHRGIPTSLTISHFPHGPSIIFTLHNVKLRHDLPE---I 172 Query: 656 GKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRHHIYE 832 G SE+YPHL+ +NFT++ G+R IMKHLFP K DS R+ITF N DD+IS RHH+Y Sbjct: 173 GNSSESYPHLVFENFTSELGKRVVKIMKHLFPPGVKKDSSRVITFINNDDFISVRHHMYV 232 Query: 833 KHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQKSLG 994 K +++L EVGPRFE+RLY+++ G +D +++ E+ LR ++ T ++ LG Sbjct: 233 K--TKDTVELSEVGPRFEMRLYELRLGLLDNKDSEVEWQLRRFIRTGNRKNYLG 284
>Q6FNN7:IMP4_CANGA U3 small nucleolar ribonucleoprotein protein IMP4 - Candida| glabrata (Yeast) (Torulopsis glabrata) Length = 288 Score = 255 bits (651), Expect = 3e-67 Identities = 135/297 (45%), Positives = 195/297 (65%), Gaps = 6/297 (2%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXX---- 286 MLRR R RREYLYRK+ E +E Q +K++ +++AL +GKP+P Sbjct: 1 MLRRQARERREYLYRKAQELQETQLQQKRQIIKQALAQGKPLPKELAEDEQLQKDFRYDQ 60 Query: 287 IDLDDQDRAVPRSIIDDEYAGAT-LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMN 463 D++D A +DDEY+ ++ + E ++++TTSR+PS+ L QF KE+K++FPN+ R+N Sbjct: 61 SMADNEDEAG----VDDEYSASSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLN 116 Query: 464 RGGQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKD 643 RG V++++V +C+ TDLI++HEHRG P L V H P GPTA+F L NVV RHDI + Sbjct: 117 RGNYVMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILN 176 Query: 644 RKAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRH 820 R G SE PHLI DNFTT G R I+K+LFP PK DS R+ITFANR D+IS R Sbjct: 177 R---GNQSEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQ 233 Query: 821 HIYEKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQKSL 991 H+Y + +++ EVGPRFE+RL++++ GT++ +A E+ LR ++ TA ++ L Sbjct: 234 HVYVR--TKDGVEMAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFVRTANRKDYL 288
>Q755T8:IMP4_ASHGO U3 small nucleolar ribonucleoprotein protein IMP4 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 283 Score = 252 bits (643), Expect = 3e-66 Identities = 133/293 (45%), Positives = 189/293 (64%), Gaps = 2/293 (0%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLD 298 MLRR R RREYLYRK+ E +E Q +K+ +++AL +GKP+P + D Sbjct: 1 MLRRQARERREYLYRKAQELQESQLQQKRDLIKQALAQGKPLPKEVADDTK-----LQRD 55 Query: 299 DQDRAVPRSIIDDEYAGAT-LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQ 475 Q + IDDEY+ + + +PK+++TTSR+PS L+QF KE+K++FP S R+NRG Sbjct: 56 YQYDESAQESIDDEYSALSGIVDPKVIVTTSRDPSTRLSQFAKEVKLLFPTSVRLNRGNY 115 Query: 476 VISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAM 655 ++ +V++C+ TDL+++HEHRG P L + H P GPTA F L NVV RHDI + Sbjct: 116 IMKNLVDACQKSGTTDLVVLHEHRGVPTALTISHFPHGPTASFSLHNVVLRHDILN---A 172 Query: 656 GKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRHHIYE 832 G SE +PHLI DNFTT G+R I+KH+FP K DS R+ITFANR D+IS R H+Y Sbjct: 173 GNQSEVHPHLIFDNFTTPLGQRVVKILKHMFPPGVKRDSPRVITFANRGDFISVRQHVYV 232 Query: 833 KHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQKSL 991 K ++L EVGPRFE++LY++ GT++ +A E+ LR ++ TA ++ L Sbjct: 233 K--TRDGVELAEVGPRFEMKLYELTLGTLENKDADVEWQLRRFVRTANRKDYL 283
>P53941:IMP4_YEAST U3 small nucleolar ribonucleoprotein protein IMP4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 290 Score = 251 bits (641), Expect = 5e-66 Identities = 133/296 (44%), Positives = 193/296 (65%), Gaps = 5/296 (1%) Frame = +2 Query: 119 MLRRNTRLRREYLYRKSLEGKERQHYEKKRRVREALEEGKPIP---TXXXXXXXXXXXXI 289 MLRR R RREYLYRK+ E ++ Q +K++ +++AL +GKP+P Sbjct: 1 MLRRQARERREYLYRKAQELQDSQLQQKRQIIKQALAQGKPLPKELAEDESLQKDFRYDQ 60 Query: 290 DLDDQDRAVPRSIIDDEYAGAT-LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNR 466 L + + A + DDEYA + + +P+I++TTSR+PS L+QF KE+K++FPN+ R+NR Sbjct: 61 SLKESEEADDLQV-DDEYAATSGIMDPRIIVTTSRDPSTRLSQFAKEIKLLFPNAVRLNR 119 Query: 467 GGQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDR 646 G V+ +V++C+ TDL+++HEHRG P L + H P GPTA F L NVV RHDI + Sbjct: 120 GNYVMPNLVDACKKSGTTDLVVLHEHRGVPTSLTISHFPHGPTAQFSLHNVVMRHDIIN- 178 Query: 647 KAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDDYISFRHH 823 G SE PHLI DNFTT G+R I+KHLF PK DS+R+ITFANR D+IS R H Sbjct: 179 --AGNQSEVNPHLIFDNFTTALGKRVVCILKHLFNAGPKKDSERVITFANRGDFISVRQH 236 Query: 824 IYEKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQKSL 991 +Y + + +++ EVGPRFE+RL++++ GT++ +A E+ LR ++ TA K+ L Sbjct: 237 VYVR--TREGVEIAEVGPRFEMRLFELRLGTLENKDADVEWQLRRFIRTANKKDYL 290
>P54073:YUY1_CAEEL Brix domain-containing protein F44G4.1 - Caenorhabditis elegans| Length = 384 Score = 156 bits (395), Expect = 2e-37 Identities = 96/282 (34%), Positives = 157/282 (55%), Gaps = 8/282 (2%) Frame = +2 Query: 161 RKSLEGKERQHYEKKRRVREALEEGKP---IPTXXXXXXXXXXXXIDLDDQDRAVPRSII 331 +++L +R ++ ++R+ L E P +P ++ +D + V Sbjct: 106 KRALRKDKRARQGERAQIRDELGESAPQKEVPKTIESMREYDATMVNEEDDE--VEHDEA 163 Query: 332 DDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCR 505 +DE+A RE PK+++T + +F EL+ PNS+ R ++ I+E + Sbjct: 164 NDEFAPYFNRETSPKVMITMTPKAKITTFKFCFELQKCIPNSEIFTRKNVLLKTIIEQAK 223 Query: 506 SHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHL 685 E TDL++VHE R +P+G+I CHLP GPTAYF + ++ D+ K G+ + +P + Sbjct: 224 EREFTDLLVVHEDRKKPNGIIFCHLPEGPTAYFKINSLTFTQDL---KKFGESTSHFPEV 280 Query: 686 ILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYE-KHGGPKSID 859 IL+NF T+ G A ++ LFP PK +R++TF N+ DYI FRHH YE K G K+ Sbjct: 281 ILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTFHNQRDYIFFRHHRYEFKKEGSKAA- 339 Query: 860 LKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPY-MNTAKKQ 982 L E+GPRF LRL +++GT D + E+VL+ + M T++++ Sbjct: 340 LLELGPRFTLRLKWLQKGTFDAKWGEFEWVLKRHEMETSRRR 381
>Q8AVP1:RPF1_XENLA Ribosome production factor 1 - Xenopus laevis (African clawed frog)| Length = 343 Score = 154 bits (389), Expect = 8e-37 Identities = 98/291 (33%), Positives = 164/291 (56%), Gaps = 11/291 (3%) Frame = +2 Query: 143 RREYLYRKSLEGKERQHY---EKKRRVREALEEG---KPIPTXXXXXXXXXXXXIDLDDQ 304 RR++++ K + K ++ +K+++ REAL + KP+P +D D+ Sbjct: 56 RRQFMFIKLKQEKRKEKLILRKKRKKEREALGDKAPPKPVPKTIENQRVYDETTVDPADE 115 Query: 305 DRAVPRSIIDDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV 478 + A+ + DE+A ++ PKIL+TTS P +F ++L + PNS R G Sbjct: 116 EVALDEAT--DEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSDVYYRRGLA 173 Query: 479 ISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 + +I+ C S + TDL++++E R P+GL++CHLP GPTA+F + NV R K+ K G Sbjct: 174 LKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVRLR---KEMKRKG 230 Query: 659 K-MSEAYPHLILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYE 832 K +E P +IL+NFTT+ G + L+P P +++ TF N+ DYI FR+H Y Sbjct: 231 KEPTEHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFRYHRY- 289 Query: 833 KHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFV-LRPYMNTAKKQ 982 K + ++E+GPRF L+L +++GT D + E+V R M+T++++ Sbjct: 290 LFKSEKKVGIQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKRHEMDTSRRK 340
>Q5R631:RPF1_PONPY Ribosome production factor 1 - Pongo pygmaeus (Orangutan)| Length = 349 Score = 150 bits (378), Expect = 1e-35 Identities = 99/282 (35%), Positives = 158/282 (56%), Gaps = 9/282 (3%) Frame = +2 Query: 164 KSLEGKERQHYEKK-RRVREALEEG---KPIPTXXXXXXXXXXXXIDLDDQDRAVPRSII 331 K + KE+ +KK ++ REAL + KP+P +D +D++ A + Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEAT- 129 Query: 332 DDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCR 505 DE+A ++ PKIL+TTS P + ++L V PNS R G + +I+ C Sbjct: 130 -DEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCI 188 Query: 506 SHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPH 682 + + TDLI+++E R P+GLI+ HLP GPTA+F + +V R +IK R GK +E P Sbjct: 189 ARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRR---GKDPTEHIPE 245 Query: 683 LILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYEKHGGPKSID 859 +IL+NFTT+ G + LFP P+ +++ TF N+ DYI FR H Y K + Sbjct: 246 IILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRY-IFRSEKKVG 304 Query: 860 LKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRP-YMNTAKKQ 982 ++E+GPRF L+L +++GT D + E+V +P M+T++++ Sbjct: 305 IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRK 346
>Q9H9Y2:RPF1_HUMAN Ribosome production factor 1 - Homo sapiens (Human)| Length = 349 Score = 150 bits (378), Expect = 1e-35 Identities = 99/282 (35%), Positives = 158/282 (56%), Gaps = 9/282 (3%) Frame = +2 Query: 164 KSLEGKERQHYEKK-RRVREALEEG---KPIPTXXXXXXXXXXXXIDLDDQDRAVPRSII 331 K + KE+ +KK ++ REAL + KP+P +D +D++ A + Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEAT- 129 Query: 332 DDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCR 505 DE+A ++ PKIL+TTS P + ++L V PNS R G + +I+ C Sbjct: 130 -DEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCI 188 Query: 506 SHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPH 682 + + TDLI+++E R P+GLI+ HLP GPTA+F + +V R +IK R GK +E P Sbjct: 189 ARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRR---GKDPTEHIPE 245 Query: 683 LILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYEKHGGPKSID 859 +IL+NFTT+ G + LFP P+ +++ TF N+ DYI FR H Y K + Sbjct: 246 IILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRY-IFRSEKKVG 304 Query: 860 LKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRP-YMNTAKKQ 982 ++E+GPRF L+L +++GT D + E+V +P M+T++++ Sbjct: 305 IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRK 346
>Q7TND5:RPF1_MOUSE Ribosome production factor 1 - Mus musculus (Mouse)| Length = 349 Score = 149 bits (376), Expect = 2e-35 Identities = 99/282 (35%), Positives = 158/282 (56%), Gaps = 9/282 (3%) Frame = +2 Query: 164 KSLEGKERQHYEKK-RRVREALEEG---KPIPTXXXXXXXXXXXXIDLDDQDRAVPRSII 331 K + KE+ +KK ++ REAL + KP+P +D +D++ A + Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEAT- 129 Query: 332 DDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCR 505 DE+A R+ PKIL+TTS P + ++L V P+S R G + +I+ C Sbjct: 130 -DEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCI 188 Query: 506 SHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPH 682 + + TDLI+++E R P+GLI+ HLP GPTA+F + +V R +IK R GK +E P Sbjct: 189 ARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRR---GKDPTEHVPE 245 Query: 683 LILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYEKHGGPKSID 859 +IL+NFTT+ G + LFP P+ +++ TF N+ DYI FR H Y K + Sbjct: 246 IILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRY-IFKSEKKVG 304 Query: 860 LKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRP-YMNTAKKQ 982 ++E+GPRF L+L +++GT D + E+V +P M+T++++ Sbjct: 305 IQELGPRFTLKLRSLQKGTFDSKYGEYEWVHKPREMDTSRRK 346
>Q5RJS9:RPF1_RAT Ribosome production factor 1 - Rattus norvegicus (Rat)| Length = 345 Score = 147 bits (370), Expect = 1e-34 Identities = 97/270 (35%), Positives = 149/270 (55%), Gaps = 8/270 (2%) Frame = +2 Query: 164 KSLEGKERQHYEKK-RRVREALEEG---KPIPTXXXXXXXXXXXXIDLDDQDRAVPRSII 331 K + KE+ +KK +R REAL + KP+P +D +D++ A + Sbjct: 71 KQQQRKEKLAAKKKLKREREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEAT- 129 Query: 332 DDEYAGATLRE--PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCR 505 DE+A R+ PKIL+TTS P + ++L V P+S R G + +I+ C Sbjct: 130 -DEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCI 188 Query: 506 SHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPH 682 + + TDLI+++E R P+GLI+ HLP GPTA+F + +V R +IK R GK +E P Sbjct: 189 ARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRR---GKDPTEHVPE 245 Query: 683 LILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYEKHGGPKSID 859 +IL+NFTT+ G + LFP P+ +++ TF N+ DYI FR H Y K + Sbjct: 246 IILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRY-IFKSEKKVG 304 Query: 860 LKEVGPRFELRLYQIKRGTVDQSEAQNEFV 949 ++E+GPRF L+L +++GT D + E+V Sbjct: 305 IQELGPRFTLKLRSLQKGTFDSKYGEYEWV 334
>Q9VKB4:RPF1_DROME Probable ribosome production factor 1 - Drosophila melanogaster| (Fruit fly) Length = 394 Score = 147 bits (370), Expect = 1e-34 Identities = 93/275 (33%), Positives = 149/275 (54%), Gaps = 5/275 (1%) Frame = +2 Query: 143 RREYLYRKSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLDDQDRA-VP 319 +R LY+K + K ++ +++R R+A P T +L+D D + Sbjct: 108 QRLALYKKMKKEKHKKKMQERRARRKAGVPANPGHTIESLREKDQTEVANLNDSDNEELQ 167 Query: 320 RSIIDDEYAGATLR--EPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIV 493 + + D+++ R EPK+L+T + NP +F EL +FPN+ R + +I Sbjct: 168 KELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSSVKKIC 227 Query: 494 ESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIK-DRKAMGKMSE 670 +S E TD+++V+E R +P+GL+V HLP GPTA+F L NV DIK D K ++++ Sbjct: 228 KSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVKLTSDIKRDHK---EITK 284 Query: 671 AYPHLILDNFTTKTGERTANIMKHLF-PVPKPDSKRLITFANRDDYISFRHHIYEKHGGP 847 P +IL+NFTT+ G ++ LF P+ +R +TF N+ DYI FRHH YE Sbjct: 285 HRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEG 344 Query: 848 KSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVL 952 K + L+E+GPRF L+L ++ GT D +++ Sbjct: 345 KRVKLRELGPRFTLKLRSLQEGTFDSKTGDYAWII 379
>Q6IQU6:RPF1_DANRE Ribosome production factor 1 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 330 Score = 139 bits (349), Expect = 3e-32 Identities = 88/289 (30%), Positives = 153/289 (52%), Gaps = 8/289 (2%) Frame = +2 Query: 143 RREYLYRKSLEGKERQHYE---KKRRVREALEEGKP---IPTXXXXXXXXXXXXIDLDDQ 304 RR ++ K E K ++ E KK++ R+AL++ P +P ++ +D+ Sbjct: 43 RRHTMFLKLKEEKRKKRMELKKKKKKERKALDDKAPPKEVPKTIENQRIYDETTVNPEDE 102 Query: 305 DRAVPRSIIDDEYAGATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVIS 484 + A + L PK+L+TTS P +F +L V P++ R G + Sbjct: 103 EVAFDEGTDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAYVYYRRGLALK 162 Query: 485 EIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK- 661 +++ C S T L++++E R P+G+++CHLP GPTA+F + +V R ++K R GK Sbjct: 163 KVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKEMKRR---GKN 219 Query: 662 MSEAYPHLILDNFTTKTGERTANIMKHLFP-VPKPDSKRLITFANRDDYISFRHHIYEKH 838 +E P +IL+NFTT+ G + LFP P+ +++ TF N+ D+I FR H Y Sbjct: 220 PTEHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFRFHRY-IF 278 Query: 839 GGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQK 985 K + ++E+GPRF L+L +++GT D + E+V + + + ++K Sbjct: 279 KNEKKVGIQELGPRFTLKLRSLQKGTFDSKFGEYEWVHKRHEMDSSRRK 327
>O14180:YDS4_SCHPO Brix domain-containing protein C4F8.04 - Schizosaccharomyces pombe| (Fission yeast) Length = 306 Score = 124 bits (310), Expect = 1e-27 Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 10/263 (3%) Frame = +2 Query: 179 KERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXXIDLDDQDRAVPRSIIDDEYAGATL 358 KER E+K ++ L + IP I+ D D + + DDE++ Sbjct: 30 KERAKEEEKDPEKKRLRLSENIPATIESKRVYDETIIE-DKPDEELQAELKDDEFSAYFS 88 Query: 359 RE---PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQV-ISEIVESCRSHEITDL 526 E PK+L+TTS+ S F EL FPN++ R G + + EI E+ TDL Sbjct: 89 EERKVPKLLVTTSKRASRKCYDFASELLDCFPNAEFRKRTGDIEVHEIAEAAAKRGYTDL 148 Query: 527 ILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNFTT 706 ++++E R + + L + HLP GP+ YF L N+ T +I + G+ + P LI++NF+T Sbjct: 149 LVLNEDRKKTNALTLVHLPNGPSFYFTLSNLQTAKEISNH---GRSTGHIPELIINNFST 205 Query: 707 KTGERTANIMKHLF-PVPKPDSKRLITFANRDDYISFRHHIY---EKHGGPKSI--DLKE 868 + G A + LF P+ ++++T + D++ FR H Y EK P I L+E Sbjct: 206 RLGMTVARAFQSLFIQTPQIQGRQVVTIHCQRDFLFFRRHRYAFREKSNMPDGIGTGLQE 265 Query: 869 VGPRFELRLYQIKRGTVDQSEAQ 937 +GPRF +RL +++G D+ E + Sbjct: 266 LGPRFTMRLRMVQKGVWDRKEGE 288
>P38805:RPF1_YEAST Ribosome production factor 1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 295 Score = 111 bits (278), Expect = 6e-24 Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 10/300 (3%) Frame = +2 Query: 113 GEMLRRNTRLRREYLYR--KSLEGKERQHYEKKRRVREALEEGKPIPTXXXXXXXXXXXX 286 G + +L+R+ ++ K + KER H +++R +E E P Sbjct: 4 GNEINITNKLKRQEIFADIKHEKNKER-HTMRRKRAKE--ERENPELREQRLKENVTQTI 60 Query: 287 IDLDDQDRAVPRSIIDDE-----YAGATLREP-KILLTTSRNPSAPLTQFVKELKVVFPN 448 + D + + + DE Y + EP KI LTT+ N +F L + PN Sbjct: 61 ENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPN 120 Query: 449 SQRMNRG-GQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVT 625 + R G + EI + C TD+++++E + + GL HLP GPT YF L + V Sbjct: 121 VTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFV- 179 Query: 626 RHDIKDRKAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFPV-PKPDSKRLITFANRDD 802 ++K G+ + P LIL+NF T+ G+ + + + P P + +++IT N+ D Sbjct: 180 --EVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRD 237 Query: 803 YISFRHHIYEKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFVLRPYMNTAKKQ 982 YI FR H Y + + L+E+GP+F L+L +++RG +++E ++ +P M+ KK+ Sbjct: 238 YIFFRRHRYVFKDNER-VGLQELGPQFTLKLKRLQRGIKEETEWEH----KPEMDKEKKK 292
>Q9V200:BRIX_PYRAB Probable brix domain-containing ribosomal biogenesis protein -| Pyrococcus abyssi Length = 224 Score = 44.3 bits (103), Expect = 0.001 Identities = 28/96 (29%), Positives = 49/96 (51%) Frame = +2 Query: 371 ILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRG 550 +L+TTS P+ F +L+ VFPNS M RG + I E++ L++++ +G Sbjct: 2 MLITTSHRPTRRTRSFGHDLERVFPNSLYMTRGKKTIQELLMEAYDRGYERLLIINVWKG 61 Query: 551 QPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 P L + + + P + G L + H +K ++ MG Sbjct: 62 NP--LKMTFIKVHPDDW-GYLGYLYLHGVKLQREMG 94
>Q9YC08:BRIX_AERPE Probable brix domain-containing ribosomal biogenesis protein -| Aeropyrum pernix Length = 180 Score = 43.1 bits (100), Expect = 0.003 Identities = 24/72 (33%), Positives = 35/72 (48%) Frame = +2 Query: 377 LTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRGQP 556 +TTSR PS + FVK+L P + R RG + E+ +++V E RG P Sbjct: 1 MTTSRRPSPRIRSFVKDLSATIPGAFRFTRGHYSMEELAREAIIRGADRIVVVGERRGNP 60 Query: 557 DGLIVCHLPLGP 592 G+I + GP Sbjct: 61 -GIIRVYAVEGP 71
>Q8TZI2:BRIX_PYRFU Probable brix domain-containing ribosomal biogenesis protein -| Pyrococcus furiosus Length = 223 Score = 42.7 bits (99), Expect = 0.003 Identities = 28/96 (29%), Positives = 49/96 (51%) Frame = +2 Query: 371 ILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRG 550 +L+TTS P+ F +L+ VFPNS + RG + I E++ L++++ +G Sbjct: 2 MLITTSHRPTRRTRSFGHDLERVFPNSLYLTRGKKTIQELLMEAYDRGYERLLILNVWKG 61 Query: 551 QPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 P L + + + P + G L + H IK ++ MG Sbjct: 62 NP--LKMTFIKVHPEDW-GYLGYLYLHGIKLQREMG 94
>Q5JDM5:BRIX_PYRKO Probable brix domain-containing ribosomal biogenesis protein -| Pyrococcus kodakaraensis (Thermococcus kodakaraensis) Length = 208 Score = 40.8 bits (94), Expect = 0.012 Identities = 25/96 (26%), Positives = 49/96 (51%) Frame = +2 Query: 371 ILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRG 550 +L+TTS P+ F +L+ VFPNS + RG + I +++ L++++ +G Sbjct: 2 MLITTSHRPTRRTRSFGHDLEKVFPNSLYLTRGKKTIQDLLMEAYDRGYERLLIINVWKG 61 Query: 551 QPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 P L + + + P + G + + H IK ++ +G Sbjct: 62 NP--LKMTFIKVDPEDW-GYIGYLYLHGIKLQREIG 94
>O74104:BRIX_PYRHO Probable brix domain-containing ribosomal biogenesis protein -| Pyrococcus horikoshii Length = 224 Score = 40.8 bits (94), Expect = 0.012 Identities = 26/96 (27%), Positives = 48/96 (50%) Frame = +2 Query: 371 ILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRG 550 +L+TTS P+ F +L+ V PNS + RG + I E++ L++++ +G Sbjct: 2 MLITTSHRPTRRTRSFGHDLERVIPNSLYLTRGKKTIQELLMEAYDRGYERLLIINVWKG 61 Query: 551 QPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMG 658 P L + + + P + G L + H +K ++ MG Sbjct: 62 NP--LKMTFIKVHPEDW-GYLGYLYLHGVKLQREMG 94
>Q8UVY2:BXDC2_XENLA Brix domain-containing protein 2 - Xenopus laevis (African clawed| frog) Length = 339 Score = 40.0 bits (92), Expect = 0.021 Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 13/203 (6%) Frame = +2 Query: 347 GATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEI 517 G + ++L+ +SR + +++L+ + P+S+ +M+R ++ + E C Sbjct: 47 GKWKNKERVLIFSSRGINFRTRHLMQDLRSLMPHSRAETKMDRKDKLFV-VNEVCEMKNC 105 Query: 518 TDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPHLILD 694 I + Q + + + P GP+A F + N+ H + + K G + + P L D Sbjct: 106 NKCIYFEAKKKQDLYMWLSNSPEGPSAKFLVQNI---HTLAELKMSGNCLKGSRPILSFD 162 Query: 695 NFTTKTGERTA--NIMKHLFPVPK------PDSKRLITFANRDDYISFRHH-IYEKHGGP 847 + + ++ +F P+ P + TF+ D+ I FR++ I E+ Sbjct: 163 PAFDREPQYALLKELLTQIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQIIEEDAA- 221 Query: 848 KSIDLKEVGPRFELRLYQIKRGT 916 L E+GPRF L L +I +G+ Sbjct: 222 ----LVEIGPRFVLNLIKIFKGS 240
>Q975H1:BRIX_SULTO Probable brix domain-containing ribosomal biogenesis protein -| Sulfolobus tokodaii Length = 183 Score = 39.7 bits (91), Expect = 0.028 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = +2 Query: 368 KILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHR 547 +I+ T+SR+ + F+ EL VFPNS ++NRG Q + +I+ L+++ + Sbjct: 14 EIVFTSSRDAPLRVRTFLNELTYVFPNSIKINRGRQSLKDIIAKSIYLNSKYLVIIDVIK 73 Query: 548 GQP 556 G P Sbjct: 74 GNP 76
>Q9HGL6:BRX1_SCHPO Ribosome biogenesis protein Brix homolog - Schizosaccharomyces| pombe (Fission yeast) Length = 295 Score = 38.9 bits (89), Expect = 0.047 Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 24/232 (10%) Frame = +2 Query: 293 LDDQDRAVPRSIIDDEY------------AGATLREPKILLTTSRNPSAPLTQFVKELKV 436 L +RA D+EY AG + K+L+ +SR + + +L Sbjct: 7 LKTSERAPKNEDEDEEYVPVQNGQGNKHSAGFVPIKQKVLVLSSRGVTYRQRHLLNDLVS 66 Query: 437 VFPNSQRMNR--GGQVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGL 610 + P+S++ ++ + ++ E + ++ R + L + P GPT F + Sbjct: 67 MMPHSKKDSKLDSKDRLYQLNELAELYNCNNIFFFESRRREDLYLHIARAPNGPTVKFHV 126 Query: 611 LNVVTRHDIKDRKAMGKMSEAYPHLILDN-FTTKTGERTAN-IMKHLFPVPK------PD 766 N+ T ++ + + P L D F T + +++ F +PK P Sbjct: 127 ENLHTMDELN--MTGNALKGSRPILSFDKTFDTAPHLKVVKELLQQTFGIPKGARRSKPF 184 Query: 767 SKRLITFANRDDYISFRHH-IYEKHGGPKS-IDLKEVGPRFELRLYQIKRGT 916 R+ T D I FR++ I E K + L E+GPRF + + I G+ Sbjct: 185 IDRVCTLTIADGKIWFRNYEIRENEDKSKDPVTLIEIGPRFVMTIINILEGS 236
>Q8TDN6:BXDC2_HUMAN Brix domain-containing protein 2 - Homo sapiens (Human)| Length = 353 Score = 38.5 bits (88), Expect = 0.062 Identities = 57/257 (22%), Positives = 111/257 (43%), Gaps = 17/257 (6%) Frame = +2 Query: 197 EKKRRVREALEEGKP----IPTXXXXXXXXXXXXIDLDDQDRAVPRSIIDDEYAGATLRE 364 ++KRR A++ KP I ++ +++DR +P + ++ + Sbjct: 5 KRKRRGGFAVQAKKPKRNEIDAEPPAKRHATAEEVEEEERDR-IPGPVCKGKWKN----K 59 Query: 365 PKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEITDLILV 535 +IL+ +SR + +++L+++ P+S+ +M+R ++ I E C I Sbjct: 60 ERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFV-INEVCEMKNCNKCIYF 118 Query: 536 HEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPHLILDNFTTKT 712 + Q + + + P GP+A F + N+ H + + K G + + P L D + Sbjct: 119 EAKKKQDLYMWLSNSPHGPSAKFLVQNI---HTLAELKMTGNCLKGSRPLLSFDPAFDEL 175 Query: 713 GERTA--NIMKHLFPVPK------PDSKRLITFANRDDYISFRH-HIYEKHGGPKSIDLK 865 ++ +F P+ P + TF D+ I FR+ I E+ L Sbjct: 176 PHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAA-----LV 230 Query: 866 EVGPRFELRLYQIKRGT 916 E+GPRF L L +I +G+ Sbjct: 231 EIGPRFVLNLIKIFQGS 247
>Q3SZZ0:BXDC2_BOVIN Brix domain-containing protein 2 - Bos taurus (Bovine)| Length = 353 Score = 38.1 bits (87), Expect = 0.081 Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 13/203 (6%) Frame = +2 Query: 347 GATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEI 517 G + +IL+ +SR + +++L+++ P+S+ +M+R ++ I E C Sbjct: 54 GKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFV-INEVCEMKNC 112 Query: 518 TDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPHLILD 694 I + Q + + + P GP+A F + N+ H + + K G + + P L D Sbjct: 113 NKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNI---HTLAELKMTGNCLKGSRPLLSFD 169 Query: 695 NFTTKTGERTA--NIMKHLFPVPK------PDSKRLITFANRDDYISFRH-HIYEKHGGP 847 + ++ +F P+ P + TF D+ I FR+ I E+ Sbjct: 170 PAFDELPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAA- 228 Query: 848 KSIDLKEVGPRFELRLYQIKRGT 916 L E+GPRF L L +I +G+ Sbjct: 229 ----LVEIGPRFVLNLIKIFQGS 247
>Q6M0M3:BRIX_METMP Probable brix domain-containing ribosomal biogenesis protein -| Methanococcus maripaludis Length = 164 Score = 37.7 bits (86), Expect = 0.11 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +2 Query: 371 ILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHRG 550 +++TTSR PS V +L VF N + +NRG +SE++E+ D+I+V E +G Sbjct: 1 MIITTSRKPSQRTRSLVNDLARVF-NFKILNRGKIPLSELIEN-----KDDMIIVEELKG 54 Query: 551 QPDGL 565 P L Sbjct: 55 NPGRL 59
>Q5RAN2:BXDC2_PONPY Brix domain-containing protein 2 - Pongo pygmaeus (Orangutan)| Length = 353 Score = 37.4 bits (85), Expect = 0.14 Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%) Frame = +2 Query: 347 GATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEI 517 G + +IL+ +SR + +++L+++ P+S+ +M+R ++ I E C Sbjct: 54 GKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFV-INEVCEMKNC 112 Query: 518 TDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGK-MSEAYPHLILD 694 I + Q + + + P GP+A F + N+ H + + K G + + P L D Sbjct: 113 NKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNI---HTLAELKMTGNCLKGSRPLLSFD 169 Query: 695 NFTTKTGERTANIMKHLF----------PVPKPDSKRLITFANRDDYISFRH-HIYEKHG 841 + ++K L P +P + TF D+ I FR+ I E+ Sbjct: 170 PAFDELPHYA--LLKELLIQILSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDA 227 Query: 842 GPKSIDLKEVGPRFELRLYQIKRGT 916 L E+GPRF L L +I +G+ Sbjct: 228 A-----LVEIGPRFVLNLIKIFQGS 247
>Q9UXB9:BRIX_SULSO Probable brix domain-containing ribosomal biogenesis protein -| Sulfolobus solfataricus Length = 170 Score = 37.4 bits (85), Expect = 0.14 Identities = 25/83 (30%), Positives = 39/83 (46%) Frame = +2 Query: 356 LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILV 535 + +I++T+SR+PS F+ L V P+S ++ RG + EI E + L+ V Sbjct: 3 IHRTRIVITSSRDPSIRTRNFLNVLTFVLPDSVKITRGKKSKIEIFERAINLGALYLLFV 62 Query: 536 HEHRGQPDGLIVCHLPLGPTAYF 604 G P +IV L YF Sbjct: 63 LAKNGNPLRIIVYDLESLSIKYF 85
>Q4QQT6:BXDC2_RAT Brix domain-containing protein 2 - Rattus norvegicus (Rat)| Length = 352 Score = 36.6 bits (83), Expect = 0.23 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 13/203 (6%) Frame = +2 Query: 347 GATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEI 517 G + +IL+ +SR + +++L+++ P+S+ +M+R ++ I E C Sbjct: 53 GKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFV-INEVCEMKNC 111 Query: 518 TDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDN 697 I + Q + + + P GP+A F + N+ H + + K G + L+ + Sbjct: 112 NKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNI---HTLAELKMTGNCLKGSRPLLSFD 168 Query: 698 FTTKTGERTANIMKHLF---------PVPKPDSKRLITFANRDDYISFRH-HIYEKHGGP 847 A + + L P +P + TF D+ I FR+ I E+ Sbjct: 169 PAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAA- 227 Query: 848 KSIDLKEVGPRFELRLYQIKRGT 916 L E+GPRF L L +I +G+ Sbjct: 228 ----LVEIGPRFVLNLIKIFQGS 246
>Q9DCA5:BXDC2_MOUSE Brix domain-containing protein 2 - Mus musculus (Mouse)| Length = 353 Score = 36.6 bits (83), Expect = 0.23 Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 13/203 (6%) Frame = +2 Query: 347 GATLREPKILLTTSRNPSAPLTQFVKELKVVFPNSQ---RMNRGGQVISEIVESCRSHEI 517 G + +IL+ +SR + +++L+++ P+S+ +M+R ++ I E C Sbjct: 54 GKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFV-INEVCEMKNC 112 Query: 518 TDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDN 697 I + Q + + + P GP+A F + N+ H + + K G + L+ + Sbjct: 113 NKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNI---HTLAELKMTGNCLKGSRPLLSFD 169 Query: 698 FTTKTGERTANIMKHLF---------PVPKPDSKRLITFANRDDYISFRH-HIYEKHGGP 847 A + + L P +P + TF D+ I FR+ I E+ Sbjct: 170 PAFDDLPHYALLKEFLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQIIEEDAA- 228 Query: 848 KSIDLKEVGPRFELRLYQIKRGT 916 L E+GPRF L L +I +G+ Sbjct: 229 ----LVEIGPRFVLNLIKIFQGS 247
>P34524:YM63_CAEEL Brix domain-containing protein K12H4.3 - Caenorhabditis elegans| Length = 352 Score = 35.4 bits (80), Expect = 0.52 Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 17/228 (7%) Frame = +2 Query: 290 DLDDQDRAVPRSIIDDEYAGATL--REPKILLTTSRNPSAPLTQFVKELKVVFPNSQRMN 463 D DDQ P+ ++ A L ++L+ SR +K++K + P+++ + Sbjct: 40 DNDDQ----PKQATEETRKRAELWTNRERVLVLCSRGADVRTRYLMKDIKDLLPHAKGDS 95 Query: 464 RGGQ-----VISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTR 628 + Q V++EI E T ++ + + L + ++ GP+ F + NV Sbjct: 96 KLDQQKSLNVLNEIAEM---KNCTKVMYFESRKRKDTYLWMSNVEKGPSIKFLVHNV--- 149 Query: 629 HDIKDRKAMGKMSEAY-PHLILDNFTTKTGERT---ANIMK-----HLFPVPKPDSKRLI 781 H +K+ K G A P L D+ K + A +M+ H P +P + Sbjct: 150 HTMKELKMSGNCLRASRPVLSFDDAFDKKPQLKLIKAVLMQTLGTPHHHPRSQPFVDHVF 209 Query: 782 TFA-NRDDYISFRHHIYEKHGGPKSIDLKEVGPRFELRLYQIKRGTVD 922 F+ D I FR+ +S+ L+EVGPRF L + ++ G+ + Sbjct: 210 NFSVGEGDKIWFRNFQIVD----ESLQLQEVGPRFVLEMVRLFAGSFE 253
>Q8ZVN2:BRIX_PYRAE Probable brix domain-containing ribosomal biogenesis protein -| Pyrobaculum aerophilum Length = 181 Score = 35.4 bits (80), Expect = 0.52 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +2 Query: 368 KILLTTSRNPSAPLTQFVKELKVVFPNSQRMNRGGQVISEIVESCRSHEITDLILVHEHR 547 K+++TTSR PS + V +L P + ++ RG + ++E + + + E R Sbjct: 6 KVIITTSREPSKKTLELVNDLVNSLPGTSKIVRGKKSFITLLEEAVACGARYIAFIWERR 65 Query: 548 GQPDGLI 568 G P L+ Sbjct: 66 GMPFALL 72
>Q97AH7:SYA_THEVO Alanyl-tRNA synthetase - Thermoplasma volcanium| Length = 876 Score = 35.0 bits (79), Expect = 0.68 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 6/85 (7%) Frame = +2 Query: 449 SQRMNRGGQVISEIVESCRSHEITDLILVHEHRG-QPDGLIVCHLPLG-----PTAYFGL 610 S+ RG QVI +I+++ +S +I DL+L+++ G PD + G P + + Sbjct: 413 SELEKRGQQVIEKILKTKKSIDIDDLVLLYDSHGISPDVVAAMAAEKGLKVMIPPNFHAM 472 Query: 611 LNVVTRHDIKDRKAMGKMSEAYPHL 685 V++RH+ K A+ K ++ YP++ Sbjct: 473 --VISRHEKK--SALKKSAKVYPNI 493
>Q08235:BRX1_YEAST Ribosome biogenesis protein BRX1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 291 Score = 33.9 bits (76), Expect = 1.5 Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 21/208 (10%) Frame = +2 Query: 356 LREPKILLTTSRNPSAPLTQFVKELKVVFPNSQR-----MNRGGQVISEIVESCRSHEIT 520 + + + LL +SR + +++L + P+S++ + Q ++EI E + Sbjct: 28 MNKQRTLLISSRGVNYRHRHLIQDLSGLLPHSRKEPKLDTKKDLQQLNEIAEL---YNCN 84 Query: 521 DLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLILDNF 700 +++ + Q L + P GPT F + N+ T ++ K S P L D Sbjct: 85 NVLFFEARKHQDLYLWLSKPPNGPTIKFYIQNLHTMDELNFTGNCLKGSR--PVLSFDQR 142 Query: 701 TTKTG--ERTANIMKHLFPVP------KPDSKRLITFANRDDYISFRHHIY--------E 832 + + ++ H F VP KP +++F+ DD I R + E Sbjct: 143 FESSPHYQLIKELLVHNFCVPPNARKSKPFIDHVMSFSIVDDKIWVRTYEISHSTKNKEE 202 Query: 833 KHGGPKSIDLKEVGPRFELRLYQIKRGT 916 G + I L E+GPRF + + I G+ Sbjct: 203 YEDGEEDISLVEIGPRFVMTVILILEGS 230
>Q12153:SSF2_YEAST Ribosome biogenesis protein SSF2 - Saccharomyces cerevisiae| (Baker's yeast) Length = 453 Score = 32.7 bits (73), Expect = 3.4 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 1/169 (0%) Frame = +2 Query: 446 NSQRMNRGGQVISEIVESC-RSHEITDLILVHEHRGQPDGLIVCHLPLGPTAYFGLLNVV 622 N +R+ + +S+ V + R +I+ LIL H+ G + A ++ VV Sbjct: 218 NLKRLYKAKNNLSKTVPNLHRKEDISSLILDHDL-----GAYTSESEIEDDA---IVRVV 269 Query: 623 TRHDIKDRKAMGKMSEAYPHLILDNFTTKTGERTANIMKHLFPVPKPDSKRLITFANRDD 802 D+K + + +S+ P + DN + G ++ PKP T Sbjct: 270 DNQDVKAKHSQTSLSQKTPVKMTDNEEREKGIEEEDVEME---EPKPSENSQPTPRK--- 323 Query: 803 YISFRHHIYEKHGGPKSIDLKEVGPRFELRLYQIKRGTVDQSEAQNEFV 949 K+I L E+GPR L+L +I+ G +EFV Sbjct: 324 ---------------KAIKLTELGPRLTLKLVKIEDGICSGKVLHHEFV 357
>Q9PTG6:DCTN2_CHICK Dynactin subunit 2 - Gallus gallus (Chicken)| Length = 402 Score = 32.0 bits (71), Expect = 5.8 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +2 Query: 473 QVISEIVESCRSHEITDLILVHEHRGQPDGLIVCHLP--LGPTA 598 Q+ S + ES E+T + L + G L+ CHL LGPTA Sbjct: 121 QIQSAVKESAAEEELTPMALARQLEGLKQQLVSCHLQKLLGPTA 164
>Q7MAE6:ARGD_WOLSU Acetylornithine aminotransferase - Wolinella succinogenes| Length = 394 Score = 32.0 bits (71), Expect = 5.8 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = -1 Query: 925 LVHSSSFDLVEPQLKTGPNLLQVNGFGATVFFVDVMPERN 806 L+H+S+ +EPQ + L++++G+ VFF + E N Sbjct: 68 LIHTSNLYYIEPQARLAEKLVKLSGYDMRVFFANSGAEAN 107 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 216,132,925 Number of extensions: 4668300 Number of successful extensions: 11235 Number of sequences better than 10.0: 44 Number of HSP's gapped: 11168 Number of HSP's successfully gapped: 44 Length of query: 431 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 315 Effective length of database: 68,868,219 Effective search space: 21693488985 Effective search space used: 21693488985 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)