Clone Name | FLbaf135n09 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001063497.1| Oryza sativa (japonica cultivar-group) Os06g0178400 (Os06g0178400) mRNA, complete cds Length = 1128 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 615 attcaactactaccctcagtgtccaaggcctga 647 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 890 tgagcaatgggatttttaagagctcggtgcatagggtt 927
>ref|NM_001063495.1| Oryza sativa (japonica cultivar-group) Os06g0177700 (Os06g0177700) mRNA, complete cds Length = 1128 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 615 attcaactactaccctcagtgtccaaggcctga 647 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 890 tgagcaatgggatttttaagagctcggtgcatagggtt 927
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 3851046 attcaactactaccctcagtgtccaaggcctga 3851078 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 3889102 attcaactactaccctcagtgtccaaggcctga 3889134 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 3900925 attcaactactaccctcagtgtccaaggcctga 3900957 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 3857551 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 3857602 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 3907430 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 3907481 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 3855537 attcaactactaccctccctgtccaaggcctgacc 3855571 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 3893525 attcaactactaccctccctgtccaaggcctgacc 3893559 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 3905416 attcaactactaccctccctgtccaaggcctgacc 3905450 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgcggaga 907 ||||||||||||| || ||||||| |||||||||||| || || ||||| |||| Sbjct: 3859213 tgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 3859266 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgcggaga 907 ||||||||||||| || ||||||| |||||||||||| || || ||||| |||| Sbjct: 3909092 tgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 3909145 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 cgccggcgtgaaggagccaccgagccagtac 117 |||||||||| ||||||||||||||| |||| Sbjct: 3911444 cgccggcgtgcaggagccaccgagccggtac 3911474 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 3853057 tgagcaatgggatttttaagagctcggtgcatagggtt 3853094 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 3854641 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 3854694 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 3891113 tgagcaatgggatttttaagagctcggtgcatagggtt 3891150 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 3892697 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 3892750 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 3902936 tgagcaatgggatttttaagagctcggtgcatagggtt 3902973 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 3904520 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 3904573 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 499 ctctggccaacacaacccccttctttcag 527 |||||||||||||| || ||||||||||| Sbjct: 3858225 ctctggccaacacagcctccttctttcag 3858253 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 499 ctctggccaacacaacccccttctttcag 527 |||||||||||||| || ||||||||||| Sbjct: 3908104 ctctggccaacacagcctccttctttcag 3908132
>dbj|AP003019.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0035I03 Length = 153749 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 6801 attcaactactaccctcagtgtccaaggcctga 6833 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 13306 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 13357 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 11292 attcaactactaccctccctgtccaaggcctgacc 11326 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgcggaga 907 ||||||||||||| || ||||||| |||||||||||| || || ||||| |||| Sbjct: 14968 tgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 15021 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 cgccggcgtgaaggagccaccgagccagtac 117 |||||||||| ||||||||||||||| |||| Sbjct: 17320 cgccggcgtgcaggagccaccgagccggtac 17350 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 8812 tgagcaatgggatttttaagagctcggtgcatagggtt 8849 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 10396 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 10449 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 499 ctctggccaacacaacccccttctttcag 527 |||||||||||||| || ||||||||||| Sbjct: 13980 ctctggccaacacagcctccttctttcag 14008
>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0015E04 Length = 152046 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 109000 attcaactactaccctcagtgtccaaggcctga 109032 Score = 65.9 bits (33), Expect = 4e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctga 695 ||||||||||||||||||||||||||||||||| Sbjct: 147056 attcaactactaccctcagtgtccaaggcctga 147088 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 115505 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 115556 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 113491 attcaactactaccctccctgtccaaggcctgacc 113525 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 151547 attcaactactaccctccctgtccaaggcctgacc 151581 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgcggaga 907 ||||||||||||| || ||||||| |||||||||||| || || ||||| |||| Sbjct: 117167 tgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgccgaga 117220 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 111011 tgagcaatgggatttttaagagctcggtgcatagggtt 111048 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 112595 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 112648 Score = 44.1 bits (22), Expect = 1.3 Identities = 34/38 (89%) Strand = Plus / Plus Query: 854 tgagcaatgggtttttcaagagcctggtgcatagggtt 891 ||||||||||| |||| |||||| ||||||||||||| Sbjct: 149067 tgagcaatgggatttttaagagctcggtgcatagggtt 149104 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 150651 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 150704 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 499 ctctggccaacacaacccccttctttcag 527 |||||||||||||| || ||||||||||| Sbjct: 116179 ctctggccaacacagcctccttctttcag 116207
>ref|NM_001063499.1| Oryza sativa (japonica cultivar-group) Os06g0178600 (Os06g0178600) mRNA, complete cds Length = 954 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 126 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 177 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 843 aatggagattttgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgc 902 ||||||||| ||||||||||||| || ||||||| |||||||||||| || || ||||| Sbjct: 696 aatggagataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgc 755 Query: 903 ggaga 907 |||| Sbjct: 756 cgaga 760
>ref|NM_001063493.1| Oryza sativa (japonica cultivar-group) Os06g0176800 (Os06g0176800) mRNA, complete cds Length = 954 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 156 ctccgagatgcccgagcccatccccatcatcgacctcagccggctctctgcc 207 |||||| ||||| |||||||||||| || |||||||||||||||| |||||| Sbjct: 126 ctccgacatgcctgagcccatccccgtcgtcgacctcagccggctgtctgcc 177 Score = 58.0 bits (29), Expect = 9e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 843 aatggagattttgagcaatgggtttttcaagagcctggtgcatagggttgtcaccaacgc 902 ||||||||| ||||||||||||| || ||||||| |||||||||||| || || ||||| Sbjct: 696 aatggagataatgagcaatgggttgttaaagagcccggtgcatagggtggtgacgaacgc 755 Query: 903 ggaga 907 |||| Sbjct: 756 cgaga 760
>dbj|AK241948.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075090N16, full insert sequence Length = 1394 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 669 attcaactactaccctccctgtccaaggcctgacc 703 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 85 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 138
>ref|NM_001063498.1| Oryza sativa (japonica cultivar-group) Os06g0178500 (Os06g0178500) mRNA, complete cds Length = 1053 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 618 attcaactactaccctccctgtccaaggcctgacc 652 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 34 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 87
>ref|NM_001063496.1| Oryza sativa (japonica cultivar-group) Os06g0177800 (Os06g0177800) mRNA, complete cds Length = 1053 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 618 attcaactactaccctccctgtccaaggcctgacc 652 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 34 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 87
>ref|NM_001063492.1| Oryza sativa (japonica cultivar-group) Os06g0176700 (Os06g0176700) mRNA, complete cds Length = 1053 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 618 attcaactactaccctccctgtccaaggcctgacc 652 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Plus Query: 70 gtgcaagagcttgtgggcgccggcgtgaaggagccaccgagccagtacgtgctt 123 ||||||||||| | || |||||||| ||||||||||||| | |||||||||| Sbjct: 34 gtgcaagagctggcggcggccggcgtcgaggagccaccgagtcggtacgtgctt 87
>ref|NM_001053093.1| Oryza sativa (japonica cultivar-group) Os02g0280700 (Os02g0280700) mRNA, complete cds Length = 1727 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 966 attcaactactaccctccctgtccaaggcctgacc 1000
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 10388292 attcaactactaccctccctgtccaaggcctgacc 10388326
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 30714 attcaactactaccctccctgtccaaggcctgacc 30748
>dbj|AK065581.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034J09, full insert sequence Length = 1729 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgacc 697 ||||||||||||||||| |||||||||||||||| Sbjct: 967 attcaactactaccctccctgtccaaggcctgacc 1001
>gb|BT018033.1| Zea mays clone EL01N0530E08.c mRNA sequence Length = 1095 Score = 50.1 bits (25), Expect = 0.021 Identities = 40/45 (88%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgaccacgtcttggg 707 ||||||||||||||||| ||||||||||| || | ||||||||| Sbjct: 539 attcaactactaccctccttgtccaaggccggagctcgtcttggg 583
>gb|BT016483.1| Zea mays clone Contig316 mRNA sequence Length = 1124 Score = 50.1 bits (25), Expect = 0.021 Identities = 40/45 (88%) Strand = Plus / Plus Query: 663 attcaactactaccctcagtgtccaaggcctgaccacgtcttggg 707 ||||||||||||||||| ||||||||||| || | ||||||||| Sbjct: 594 attcaactactaccctccttgtccaaggccggagctcgtcttggg 638
>gb|AC185359.2| Populus trichocarpa clone Pop1-53C7, complete sequence Length = 136782 Score = 48.1 bits (24), Expect = 0.082 Identities = 24/24 (100%) Strand = Plus / Minus Query: 854 tgagcaatgggtttttcaagagcc 877 |||||||||||||||||||||||| Sbjct: 58399 tgagcaatgggtttttcaagagcc 58376
>ref|NM_001063500.1| Oryza sativa (japonica cultivar-group) Os06g0178700 (Os06g0178700) mRNA, complete cds Length = 1302 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 cgccggcgtgaaggagccaccgagccagtac 117 |||||||||| ||||||||||||||| |||| Sbjct: 142 cgccggcgtgcaggagccaccgagccggtac 172
>ref|XM_512111.2| PREDICTED: Pan troglodytes hypothetical LOC455396 (LOC455396), mRNA Length = 12674 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 7880 agcaatgggtttttcaagagcct 7858
>gb|AY373435.1| Streptomyces nanchangensis strain NS3226 NlmTI (nlmTI), NlmRI (nlmRI), NlmA1 (nlmA1), NlmA2 (nlmA2), NlmA3 (nlmA3), NlmA6 (nlmA6), NlmA7 (nlmA7), NlmB (nlmB), NlmA5 (nlmA5), NlmA4 (nlmA4), NlmOI (nlmOI), CcrA (ccrA), NlmTII (nlmTII), NlmA (nlmA), NlmB (nlmB), NlmC (nlmC), and NlmD (nlmD) genes, complete cds Length = 104096 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 215 ccgaggagttcgacaagctgcgg 237 ||||||||||||||||||||||| Sbjct: 75630 ccgaggagttcgacaagctgcgg 75608
>ref|XM_001089105.1| PREDICTED: Macaca mulatta similar to CG14299-PA, isoform A (LOC700766), mRNA Length = 12518 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 7701 agcaatgggtttttcaagagcct 7679
>ref|NM_020964.2| Homo sapiens KIAA1632 (KIAA1632), mRNA Length = 12715 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 7872 agcaatgggtttttcaagagcct 7850
>gb|AC087685.9| Homo sapiens chromosome 18, clone RP11-618K16, complete sequence Length = 155807 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 34913 agcaatgggtttttcaagagcct 34891
>gb|AC090355.9| Homo sapiens chromosome 18, clone RP11-745C22, complete sequence Length = 186783 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 21616 agcaatgggtttttcaagagcct 21638
>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains part of a novel gene similar to CSMD (CUB and sushi multiple domains protein), complete sequence Length = 161104 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 345 agaagagaaacaaaagtactcaaacat 371 |||||||||||||||||||||| |||| Sbjct: 149274 agaagagaaacaaaagtactcacacat 149300
>dbj|AK102979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115N23, full insert sequence Length = 1303 Score = 46.1 bits (23), Expect = 0.33 Identities = 29/31 (93%) Strand = Plus / Plus Query: 87 cgccggcgtgaaggagccaccgagccagtac 117 |||||||||| ||||||||||||||| |||| Sbjct: 143 cgccggcgtgcaggagccaccgagccggtac 173
>emb|AL583915.1|HSM802938 Homo sapiens mRNA; cDNA DKFZp667P2311 (from clone DKFZp667P2311) Length = 2758 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 881 agcaatgggtttttcaagagcct 859
>gb|BC036911.1| Homo sapiens KIAA1632, mRNA (cDNA clone IMAGE:5139756), complete cds Length = 3519 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 1558 agcaatgggtttttcaagagcct 1536
>gb|BC003695.1| Homo sapiens KIAA1632, mRNA (cDNA clone IMAGE:3456134), partial cds Length = 3407 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 856 agcaatgggtttttcaagagcct 878 ||||||||||||||||||||||| Sbjct: 1551 agcaatgggtttttcaagagcct 1529
>gb|AC187110.2| Gallus gallus BAC clone CH261-95L24 from chromosome z, complete sequence Length = 242388 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 842 taatggagattttgagcaatgg 863 |||||||||||||||||||||| Sbjct: 236003 taatggagattttgagcaatgg 236024
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete sequence Length = 155196 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1244 cattaaaccctaatataaaact 1265 |||||||||||||||||||||| Sbjct: 54603 cattaaaccctaatataaaact 54624
>gb|AF058978.1|AF058978 Drosophila saltans xanthine dehydrogenase (Xdh) gene, partial cds Length = 2212 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 621 cctcgtaaacatgatcggcgac 642 |||||||||||||||||||||| Sbjct: 748 cctcgtaaacatgatcggcgac 727
>gb|AC145935.3| Gallus gallus BAC clone CH261-42P15 from chromosome unknown, complete sequence Length = 194387 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 842 taatggagattttgagcaatgg 863 |||||||||||||||||||||| Sbjct: 42749 taatggagattttgagcaatgg 42770
>gb|EF028472.1| Arabidopsis thaliana ecotype Shakdara DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 5201 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5055 tcccagatttttgtgtgtgta 5035
>gb|EF028471.1| Arabidopsis thaliana ecotype NILDOG17-1 DOG1 mutant (DOG1) gene, complete cds Length = 5178 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5032 tcccagatttttgtgtgtgta 5012
>gb|EF028470.1| Arabidopsis thaliana ecotype Landsberg erecta DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 3387 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 3241 tcccagatttttgtgtgtgta 3221
>gb|EF028469.1| Arabidopsis thaliana ecotype Kondara DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 5201 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5055 tcccagatttttgtgtgtgta 5035
>gb|EF028468.1| Arabidopsis thaliana ecotype kashmir-2 DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 5200 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5054 tcccagatttttgtgtgtgta 5034
>gb|EF028466.1| Arabidopsis thaliana ecotype Cape Verde Islands DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 5179 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5033 tcccagatttttgtgtgtgta 5013
>gb|EF028465.1| Arabidopsis thaliana ecotype Antwerp-1 DOG1 alpha splice variant (DOG1) gene, complete cds, alternatively spliced Length = 5201 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 5055 tcccagatttttgtgtgtgta 5035
>gb|AC188668.3| Pan troglodytes BAC clone CH251-162B7 from chromosome 7, complete sequence Length = 146420 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 143285 ttttacctatttcccaaatttttgt 143309
>ref|XM_001211956.1| Aspergillus terreus NIH2624 conserved hypothetical protein (ATEG_02778) mRNA, complete cds Length = 3045 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ccatccccatcatcgacctca 193 ||||||||||||||||||||| Sbjct: 2531 ccatccccatcatcgacctca 2551
>gb|AE014134.5| Drosophila melanogaster chromosome 2L, complete sequence Length = 23011544 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgagcccatccccatcatcga 188 ||||||||||||||||||||| Sbjct: 3513036 cgagcccatccccatcatcga 3513016
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 16309949 ccgatgtgggcaacatacgga 16309969
>ref|XM_001116869.1| PREDICTED: Macaca mulatta hypothetical protein LOC718826 (LOC718826), mRNA Length = 1471 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 806 ttgttccaaatgcattggttatgaa 830 ||||| ||||||||||||||||||| Sbjct: 420 ttgtttcaaatgcattggttatgaa 396
>gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromosome 7, complete sequence Length = 183313 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 70549 ttttacctatttcccaaatttttgt 70525
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 446 ggaacgaccggctcaatctcc 466 ||||||||||||||||||||| Sbjct: 1011958 ggaacgaccggctcaatctcc 1011938
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 159781 ccgatgtgggcaacatacgga 159801
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 216 cgaggagttcgacaagctgcggtccgcgt 244 ||||||||||||||||||| |||||||| Sbjct: 1232501 cgaggagttcgacaagctgtcgtccgcgt 1232473
>ref|NM_175954.1| Drosophila melanogaster CG33123-RA (CG33123), mRNA Length = 3791 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 cgagcccatccccatcatcga 188 ||||||||||||||||||||| Sbjct: 1408 cgagcccatccccatcatcga 1428
>gb|AC133123.3| Homo sapiens 3 BAC RP11-441E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114080 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 59305 ttttacctatttcccaaatttttgt 59281
>ref|NM_167518.1| Drosophila melanogaster Traf3 CG4394-RB, transcript variant B (Traf3), mRNA Length = 1809 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 320 ccgatgtgggcaacatacgga 340
>ref|NM_167517.1| Drosophila melanogaster Traf3 CG4394-RA, transcript variant A (Traf3), mRNA Length = 2249 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 760 ccgatgtgggcaacatacgga 780
>ref|NM_132898.2| Drosophila melanogaster Traf3 CG4394-RC, transcript variant C (Traf3), mRNA Length = 2337 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 848 ccgatgtgggcaacatacgga 868
>gb|AC140112.3| Homo sapiens BAC clone RP11-1278I4 from UL, complete sequence Length = 216658 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 33339 ttttacctatttcccaaatttttgt 33363
>dbj|AK131448.1| Homo sapiens cDNA FLJ16592 fis, clone TESTI4001984 Length = 3944 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 2672 ttttacctatttcccaaatttttgt 2648
>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence Length = 191144 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 28950 ttttacctatttcccaaatttttgt 28926
>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence Length = 162914 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 110773 ttttacctatttcccaaatttttgt 110749
>gb|AY119663.1| Drosophila melanogaster SD07726 full insert cDNA Length = 3809 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 cgagcccatccccatcatcga 188 ||||||||||||||||||||| Sbjct: 1397 cgagcccatccccatcatcga 1417
>gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, complete sequence Length = 157980 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 105120 ttttacctatttcccaaatttttgt 105144
>ref|XM_747537.1| Aspergillus fumigatus Af293 chitin synthase D (Afu1g12600) partial mRNA Length = 2178 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 719 atacagatggctcgataatcacagtcaac 747 |||||| ||||| |||||||||||||||| Sbjct: 344 atacagttggctggataatcacagtcaac 316
>emb|CR388047.20| Zebrafish DNA sequence from clone DKEY-244D13, complete sequence Length = 223119 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 tcaatagaagagaaacaaaag 360 ||||||||||||||||||||| Sbjct: 186642 tcaatagaagagaaacaaaag 186622
>emb|AL359181.28| Human DNA sequence from clone RP11-392N11 on chromosome 9 Contains the 3' end of the PHF2 gene for PHD finger protein 2 (GRC5, KIAA0662), complete sequence Length = 165415 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 137485 ttttacctatttcccaaatttttgt 137509
>gb|AY052057.1| Drosophila melanogaster LP08566 full length cDNA Length = 2352 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 848 ccgatgtgggcaacatacgga 868
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 216 cgaggagttcgacaagctgcggtccgcgt 244 ||||||||||||||||||| |||||||| Sbjct: 214401 cgaggagttcgacaagctgtcgtccgcgt 214429
>emb|BX649606.1| Aspergillus fumigatus BAC pilot project supercontig; segment 2/3 Length = 348551 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 719 atacagatggctcgataatcacagtcaac 747 |||||| ||||| |||||||||||||||| Sbjct: 25820 atacagttggctggataatcacagtcaac 25792
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cggcagcgccgaggagttcga 227 ||||||||||||||||||||| Sbjct: 182766 cggcagcgccgaggagttcga 182786
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cggcagcgccgaggagttcga 227 ||||||||||||||||||||| Sbjct: 330146 cggcagcgccgaggagttcga 330166
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 216 cgaggagttcgacaagctgcggtccgcgt 244 ||||||||||||||||||| |||||||| Sbjct: 2548574 cgaggagttcgacaagctgtcgtccgcgt 2548546
>gb|AC009751.6|AC009751 Drosophila melanogaster, chromosome 2L, region 23F-24A, BAC clone BACR26A07, complete sequence Length = 172436 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgagcccatccccatcatcga 188 ||||||||||||||||||||| Sbjct: 170384 cgagcccatccccatcatcga 170364
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1269 ccgatgtgggcaacatacgga 1289 ||||||||||||||||||||| Sbjct: 63827 ccgatgtgggcaacatacgga 63847
>gb|AC008323.3|AC008323 Drosophila melanogaster, chromosome 2L, region 24D-24D, BAC clone BACR03G07, complete sequence Length = 170064 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgagcccatccccatcatcga 188 ||||||||||||||||||||| Sbjct: 58306 cgagcccatccccatcatcga 58286
>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete sequence Length = 237211 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 105299 ttttacctatttcccaaatttttgt 105323
>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22 Length = 59648 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1187 tcccagatttttgtgtgtgta 1207 ||||||||||||||||||||| Sbjct: 6022 tcccagatttttgtgtgtgta 6042
>emb|BX664619.13| Mouse DNA sequence from clone RP23-349B9 on chromosome 11, complete sequence Length = 154608 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 agaacctacagactctggcca 507 ||||||||||||||||||||| Sbjct: 121935 agaacctacagactctggcca 121955
>emb|BX546492.4| Human DNA sequence from clone RP11-441E2 on chromosome 22, complete sequence Length = 165333 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1176 ttttacctatttcccagatttttgt 1200 |||||||||||||||| |||||||| Sbjct: 59306 ttttacctatttcccaaatttttgt 59282
>gb|U62614.1|SFU62614 Aspergillus fumigatus class VI chitin synthase (chsD) gene, complete cds Length = 3375 Score = 42.1 bits (21), Expect = 5.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 719 atacagatggctcgataatcacagtcaac 747 |||||| ||||| |||||||||||||||| Sbjct: 846 atacagttggctggataatcacagtcaac 818 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 220,965,572 Number of extensions: 11446300 Number of successful extensions: 212861 Number of sequences better than 10.0: 78 Number of HSP's gapped: 212861 Number of HSP's successfully gapped: 121 Length of query: 1339 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1316 Effective length of database: 18,503,978,556 Effective search space: 24351235779696 Effective search space used: 24351235779696 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)