ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99m13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os03g52130:12003.t04539:unspliced-genomic expressed protein 95 8e-44
2LOC_Os12g04270:12012.t00316:unspliced-genomic expressed protein 35 0.75
3LOC_Os05g46760:12005.t04161:unspliced-genomic mitogen-activa... 35 0.75
4LOC_Os04g22440:12004.t01974:unspliced-genomic hypothetical p... 34 1.0
5LOC_Os02g09130:12002.t00760:unspliced-genomic palmitoyltrans... 33 2.0
6LOC_Os01g06680:12001.t00551:unspliced-genomic retrotransposo... 33 2.0
7LOC_Os09g21820:12009.t01916:unspliced-genomic retrotransposo... 25 2.6
8LOC_Os05g30430:12005.t02642:unspliced-genomic expressed protein 33 2.7
9LOC_Os01g03050:12001.t00197:unspliced-genomic fruit protein ... 33 2.7
10LOC_Os03g09160:12003.t00771:unspliced-genomic expressed protein 30 3.6
11LOC_Os05g32500:12005.t02846:unspliced-genomic expressed protein 32 3.7
12LOC_Os04g35730:12004.t03243:unspliced-genomic serine/arginin... 32 3.7
13LOC_Os03g12460:12003.t01045:unspliced-genomic conserved olig... 32 3.7
14LOC_Os01g69990:12001.t06301:unspliced-genomic GYF domain con... 32 3.7
15LOC_Os01g40520:12001.t03576:unspliced-genomic hypothetical p... 32 3.7
16LOC_Os01g11300:12001.t01002:unspliced-genomic cytochrome P45... 26 5.0
17LOC_Os03g52900:12003.t04612:unspliced-genomic conserved hypo... 32 5.1
18LOC_Os04g55490:12004.t05021:unspliced-genomic expressed protein 31 7.0
19LOC_Os02g01730:12002.t00073:unspliced-genomic senescence-ind... 31 7.0
20LOC_Os09g35540:12009.t03032:unspliced-genomic expressed protein 27 7.8
21LOC_Os12g04424:12012.t00331:unspliced-genomic strictosidine ... 31 9.6
22LOC_Os08g01550:12008.t00054:unspliced-genomic hypothetical p... 31 9.6
23LOC_Os05g46520:12005.t04138:unspliced-genomic polygalacturon... 31 9.6
24LOC_Os05g43050:12005.t03798:unspliced-genomic conserved hypo... 31 9.6
25LOC_Os05g35266:12005.t004767:unspliced-genomic beta-1,3-gala... 31 9.6
26LOC_Os05g33200:12005.t02915:unspliced-genomic retrotransposo... 31 9.6
27LOC_Os02g57980:12002.t05369:unspliced-genomic ATP-dependent ... 31 9.6
28LOC_Os01g11160:12001.t00989:unspliced-genomic cationic amino... 31 9.6
29LOC_Os05g25830:12005.t02238:unspliced-genomic conserved hypo... 31 9.6
30LOC_Os01g64020:12001.t05770:unspliced-genomic transcription ... 31 9.6

>LOC_Os03g52130:12003.t04539:unspliced-genomic expressed protein|
          Length = 1344
 Score = 93.2 bits (197), Expect(3) = 8e-44
 Identities = 42/76 (55%), Positives = 50/76 (65%)
 Frame = +2 / +2

                                                                       
Query: 17  SKLISYPMAQPPGKLLDTIRRPVAAASSLHQSAANHLQPLLSLAQRNGVNRRCILTLLXX 196
           +K+    MAQP GKL+DTIRRP  AAS+ H+SA  HLQPL  LAQRNG++RR +LT L  
Sbjct: 44  TKITPTTMAQPQGKLVDTIRRPFTAASTFHRSATRHLQPLAMLAQRNGISRRGLLTFLTS 223

                           
Query: 197 XXXXXXXXXXRKALLQ 244
                     RKALLQ
Sbjct: 224 TAAIPEAGESRKALLQ 271



 Score = 89.5 bits (189), Expect(3) = 8e-44
 Identities = 34/46 (73%), Positives = 40/46 (86%)
 Frame = +2 / +1

                                                          
Query: 290  ERLDDFYKRNYKDYFGFMEGSVREKPAEELTESEKGILAWLDKNK* 427
            +RLDD+YKRNY+DYFG +EG  R+K  +ELTESEKGIL WLDKNK*
Sbjct: 946  QRLDDYYKRNYRDYFGLIEGPARQKNEDELTESEKGILEWLDKNK* 1083



 Score = 37.7 bits (76), Expect(3) = 8e-44
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2 / +3

                              
Query: 245 DYVKRSKENKEKNDKERLD 301
           +Y+K+SKENKEKNDKE  D
Sbjct: 372 EYLKKSKENKEKNDKEVCD 428



 Score = 95.5 bits (202), Expect(3) = 8e-27
 Identities = 44/77 (57%), Positives = 51/77 (66%)
 Frame = -3 / -3

                                                                       
Query: 241 Q*RLP*FTGLGYGCSRCQQSEDAPPVNSIPLSQAEQRLQMICR*LMKR*SCCDRPSDCVQ 62
           Q* L *FT L YGCS  ++SE APP N++PLSQ  Q L+M C * MKR*SCC+ P DCV 
Sbjct: 268 Q*SLS*FTSLRYGCSGGEESEKAPPANAVPLSQHGQWLEMPCC*SMKR*SCCEWPPDCVH 89

                            
Query: 61  QLTWRLSHGI*DEFALL 11
           Q    LSHG   +  LL
Sbjct: 88  QFPLGLSHGSWSDLCLL 38



 Score = 40.9 bits (83), Expect(3) = 8e-27
 Identities = 25/52 (48%), Positives = 30/52 (57%)
 Frame = -3 / -1

                                                                
Query: 454  GAVMLNTS*LLVLVKPRENSFXXXXXXXXXXLPNRAFHETEVILVIPLVKVV 299
            G  ++ + *L VLVKP ENSF          L  RA  +T+VI VIPLV VV
Sbjct: 1110 GMHIILSF*LFVLVKPFENSFLRLCKLIFILLSCRALDQTKVIPVIPLVVVV 955



 Score = 26.3 bits (51), Expect(3) = 8e-27
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -2 / -1

                          
Query: 287 CHSSLCFPLTSSHNL 243
           C S LCFPL SS  L
Sbjct: 414 CRSFLCFPLISSDTL 370



 Score = 92.7 bits (196), Expect(2) = 3e-21
 Identities = 42/78 (53%), Positives = 49/78 (62%)
 Frame = +3 / +3

                                                                       
Query: 15  RANSSHIPWLSLQVSCWTQSEGRSQQLHLFINQRQIICSRCSAWLRGMELTGGASSLCWH 194
           +  S  +PWLS + + WTQS G SQQL  FI+Q+Q I S    WLRG  L GGA SL   
Sbjct: 42  KQRSLQLPWLSPKGNWWTQSGGHSQQLQRFIDQQQGISSHWPCWLRGTALAGGAFSLSSP 221

                             
Query: 195 RLQPYPRPVNQGRRYCKI 248
            LQPY R VNQ R YCK+
Sbjct: 222 PLQPYLRLVNQERLYCKV 275



 Score = 31.8 bits (63), Expect(2) = 3e-21
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +1 / +3

                             
Query: 376  AHGVGERNSRVA*QEQV 426
            A+ VGERNSR+A*QEQ+
Sbjct: 1032 AYRVGERNSRMA*QEQI 1082



 Score = 72.5 bits (152), Expect(2) = 2e-17
 Identities = 37/70 (52%), Positives = 42/70 (60%)
 Frame = -2 / -2

                                                                       
Query: 245 LAIAPSLIHWPRVWLQPMPAE*GCTSC*LHSSEPSXXXXXXDLPLIDEEMKLLRPAF*LC 66
           LA+ P LIH P+VWLQ    +*   SC*  SSEP+       L LIDE +KLL  A *LC
Sbjct: 272 LAVEPFLIHQPQVWLQWR*GK*EGPSC*CRSSEPTWPVAGDALLLIDETLKLL*MAS*LC 93

                     
Query: 65  PAAYLEAEPW 36
           P   L AEPW
Sbjct: 92  PPVSLGAEPW 63



 Score = 39.1 bits (79), Expect(2) = 2e-17
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -1 / -2

                                               
Query: 432  ASYLFLSSHARIPFXXXXXXXXXXSLTEPSMKPK* 328
            + YLFLSSH+RIPF           L  PS++PK*
Sbjct: 1088 SDYLFLSSHSRIPFSDSVSSSSFFCLAGPSIRPK* 984



 Score = 55.6 bits (115), Expect(3) = 3e-11
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -1 / -1

                                                   
Query: 243 CNSAFLDSLASGMAAADASRVRMHLLLTPFL*AKLSSGCR 124
           C+ AFLDS ASGMAA +  +VR  LLL PFL*A ++SG R
Sbjct: 270 CSRAFLDSPASGMAAVEVRKVRRPLLLMPFL*ANMASGWR 151



 Score = 27.2 bits (53), Expect(3) = 3e-11
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2 / -3

                         
Query: 431  LATCSCQATREFL 393
            L  CSCQA REFL
Sbjct: 1087 LTICSCQAIREFL 1049



 Score = 26.7 bits (52), Expect(3) = 3e-11
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = -1 / -1

                          
Query: 81  GLLIVSSSLPGG*AM 37
           GLLIVS+S P G*AM
Sbjct: 108 GLLIVSTSFPWG*AM 64



 Score = 38.2 bits (77), Expect(2) = 5e-04
 Identities = 19/35 (54%), Positives = 23/35 (65%)
 Frame = +1 / +1

                                              
Query: 142 LGSEEWS*QEVHPHSAGIGCSHTRGQ*IKEGAIAR 246
           +GSEE  *QE   H   + CSHT G *IK+G+ AR
Sbjct: 169 VGSEERH*QEGPSHFPHLHCSHT*GW*IKKGSTAR 273



 Score = 24.9 bits (48), Expect(2) = 5e-04
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1 / +1

                            
Query: 25  HLISHGSASR*AAGHNQ 75
           H   HGSA R   GHNQ
Sbjct: 52  HSNYHGSAPRETGGHNQ 102



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>LOC_Os12g04270:12012.t00316:unspliced-genomic expressed protein|
          Length = 3493

 Score = 34.5 bits (69), Expect = 0.75
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3 / -2

                                                               
Query: 189 WHRLQPYPRPVNQGRRYCKIM*RGQRKTKRRMTRRGWTTFTRGITRITSVSW 344
           W   +  P P  +G R+    *RG R  +RR  R GW+   R   R  + +W
Sbjct: 159 WRAWKQRPAPGGRGGRWRWCY*RGARPWRRRARRSGWSEGYRRRGRRDASAW 4



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>LOC_Os05g46760:12005.t04161:unspliced-genomic mitogen-activated protein kinase kinase kinase 1, putative,|
           expressed
          Length = 1419

 Score = 34.5 bits (69), Expect = 0.75
 Identities = 18/41 (43%), Positives = 20/41 (48%)
 Frame = +3 / -3

                                                    
Query: 204 PYPRPVNQGRRYCKIM*RGQRKTKRRMTRRGWTTFTRGITR 326
           P+PRP    RR      R     +RR TRRG T  T G TR
Sbjct: 457 PWPRPPRTPRRRTPPSARRTSPPRRRATRRGRTRGTSGTTR 335



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>LOC_Os04g22440:12004.t01974:unspliced-genomic hypothetical protein|
          Length = 549

 Score = 34.1 bits (68), Expect = 1.0
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +3 / +1

                                                                 
Query: 78  GRSQQLHLFINQRQIICSRCSAWLRGMELTGGASSLCWHRLQPYPRPVNQGRRY 239
           G ++  H     R ++ S CS +           S CW R  PY R   QG+ Y
Sbjct: 382 GAAKGTHRRAGTRIVVLSPCSVFSLPRASRSSCCSACWRRSFPYQRASYQGQIY 543



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>LOC_Os02g09130:12002.t00760:unspliced-genomic palmitoyltransferase TIP1, putative, expressed|
          Length = 8353

 Score = 33.1 bits (66), Expect = 2.0
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +3 / +2

                                                            
Query: 204 PYPRPVNQGRRYCKIM*RGQRKTKRRMTRRGWTTFTRGITRITSVSWKA 350
           P PRP        +   RG+R  +RRM RR  TT TR     TS S  A
Sbjct: 233 PPPRPPPSEAERSRARARGRRGRRRRMRRRSRTTCTRARRTGTSRSCTA 379



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>LOC_Os01g06680:12001.t00551:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 5123

 Score = 33.1 bits (66), Expect = 2.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3 / +3

                                                      
Query: 111  QRQIICSRCSAWLRGMELTGGASSLCWHRLQPYPRPVNQGRR 236
            +R  +C R  +  RG ++T   SS CW R+  +   V  GRR
Sbjct: 4317 RRSGVCGRSRSLQRGNDVTKRGSSSCWPRVPSHG*RVLSGRR 4442



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>LOC_Os09g21820:12009.t01916:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4227

 Score = 25.4 bits (49), Expect(2) = 2.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2 / -2

                               
Query: 119 NHLQPLLSLAQRNGVNRRCI 178
           +HLQP + L +  G  RRC+
Sbjct: 305 SHLQPPVPLCRSVGFRRRCL 246



 Score = 24.4 bits (47), Expect(2) = 2.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3 / -1

                    
Query: 15  RANSSHIPW 41
           RANS H+PW
Sbjct: 462 RANSGHLPW 436



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>LOC_Os05g30430:12005.t02642:unspliced-genomic expressed protein|
          Length = 3536

 Score = 32.7 bits (65), Expect = 2.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3 / +3

                                             
Query: 129 SRCSAWLRGMELTGGASSLCWHRLQPYPRPVNQG 230
           +R + W R    + GA S  WHR  P  RP +QG
Sbjct: 108 ARTARWTRRRRRSRGAPSGHWHRSPPPRRPPSQG 209



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>LOC_Os01g03050:12001.t00197:unspliced-genomic fruit protein PKIWI502, putative, expressed|
          Length = 2679

 Score = 32.7 bits (65), Expect = 2.7
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = +3 / -1

                                       
Query: 213 RPVNQGRRYCKIM*RGQRKTKRRMTRRG 296
           RP  +GRR C+   RG+R   RR TRRG
Sbjct: 555 RPRIRGRRRCRRRGRGRRGAGRRGTRRG 472



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>LOC_Os03g09160:12003.t00771:unspliced-genomic expressed protein|
          Length = 816

 Score = 29.9 bits (59), Expect(2) = 3.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3 / -3

                                         
Query: 210 PRPVNQGRRYCKIM*RGQRKTKRRMTRRGW 299
           P P  +GRR C+    G R+  R  +RR W
Sbjct: 166 PGPSGRGRRTCRAAGAGARRRGRAGSRRRW 77



 Score = 21.7 bits (41), Expect(2) = 3.6
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = +3 / -3

                                  
Query: 168 GGASSLCWHRLQPYPRPVNQGRR 236
           G AS   W R  P P P   GRR
Sbjct: 667 GRASRRPWSRGAPSPPPWACGRR 599



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>LOC_Os05g32500:12005.t02846:unspliced-genomic expressed protein|
          Length = 4445

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +3 / +2

                                       
Query: 258 GQRKTKRRMTRRGWTTFTRGITRITSVS 341
           G+R+ +RR  RRG T  TRG +R TS S
Sbjct: 59  GRRRRRRRGARRGRTGGTRGRSRRTSTS 142



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>LOC_Os04g35730:12004.t03243:unspliced-genomic serine/arginine repetitive matrix protein 1, putative|
          Length = 693

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3 / +2

                                         
Query: 258 GQRKTKRRMTRRGWTTFTRGITRITSVSWK 347
           G R+ +RR  RR W T  R +  ITS  W+
Sbjct: 509 GGRRRRRRRRRRWWWTTWRCLHPITSTQWR 598



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>LOC_Os03g12460:12003.t01045:unspliced-genomic conserved oligomeric complex COG6 family protein, expressed|
          Length = 6681

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +3 / -3

                                                
Query: 102  FINQRQIICSRCSAWLRGMELTGGASSLCWHRLQPY 209
            ++ Q+ IIC + S+W+  M     +  LC HR+  Y
Sbjct: 4207 YLEQKNIICKQNSSWIF*MAKNSMSDLLCNHRIPRY 4100



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>LOC_Os01g69990:12001.t06301:unspliced-genomic GYF domain containing protein, expressed|
          Length = 6356

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2 / +2

                                             
Query: 290  PCHSSLCFPLTSSHNLAIAPSLIHWPRVWLQPM 192
            PC      P  S+H       L H PR++LQP+
Sbjct: 5291 PCQKGALIPC*SAHQANTVLQLRHCPRIYLQPL 5389



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>LOC_Os01g40520:12001.t03576:unspliced-genomic hypothetical protein|
          Length = 741

 Score = 32.2 bits (64), Expect = 3.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3 / +2

                                        
Query: 228 GRRYCKIM*RGQRKTKRRMTRRGWTTFTR 314
           GR  C+ + RG+ + +R  + RGW T TR
Sbjct: 284 GRNRCR*VKRGEEERERESSARGWLTRTR 370



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>LOC_Os01g11300:12001.t01002:unspliced-genomic cytochrome P450 monooxygenase CYP710A, putative, expressed|
          Length = 1670

 Score = 26.3 bits (51), Expect(2) = 5.0
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3 / -3

                              
Query: 261 QRKTKRRMTRRGWTTFTRG 317
           +R+   R  RRGWTT +RG
Sbjct: 486 RRRRGGRSRRRGWTTPSRG 430



 Score = 22.6 bits (43), Expect(2) = 5.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2 / -3

                             
Query: 356 REKPAEELTESEKGILAW 409
           RE+PA   T S +G  AW
Sbjct: 369 REQPAFPRTRSGRGSCAW 316



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>LOC_Os03g52900:12003.t04612:unspliced-genomic conserved hypothetical protein|
          Length = 4577

 Score = 31.8 bits (63), Expect = 5.1
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3 / +2

                                            
Query: 117 QIICSRCSAWLRGMELTGGASSLCWHRLQPYPR 215
           +I CSR S W    + +G   S  W RL  +PR
Sbjct: 809 KIFCSRVSPWFWRRKSSGWKGSRTWKRLVRWPR 907



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>LOC_Os04g55490:12004.t05021:unspliced-genomic expressed protein|
          Length = 1123

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = +2 / -2

                                         
Query: 50  PGKLLDTIRRPVAAASSLHQSAANHLQPLL 139
           P    DT RRP+AAASS    AA    PLL
Sbjct: 729 PSMAGDTPRRPMAAASSSRTMAARTRHPLL 640



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>LOC_Os02g01730:12002.t00073:unspliced-genomic senescence-induced receptor-like serine/threonine-protein kinase|
           precursor, putative, expressed
          Length = 2428

 Score = 31.3 bits (62), Expect = 7.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2 / +3

                                        
Query: 116 PLIDEEMKLLRPAF*LCPAAYLEAEPWDM 30
           P   +E+ LLRPA  L P+   E EPW +
Sbjct: 252 PPPQQELPLLRPAAKLVPSTKEEGEPWKL 338



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>LOC_Os09g35540:12009.t03032:unspliced-genomic expressed protein|
          Length = 1944

 Score = 27.2 bits (53), Expect(2) = 7.8
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +3 / +2

                                               
Query: 117  QIICSRCSAWLRGMELTGGASSLCWHRLQPYPRPV 221
            QI CSR  AWL G+     +SS       P P  V
Sbjct: 908  QIRCSRSMAWLCGLTCIKESSSANTTTCSPIPMTV 1012



 Score = 24.4 bits (47), Expect(2) = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3 / +2

                      
Query: 36  PWLSLQVSCWT 68
           PWL L VS WT
Sbjct: 200 PWLGLIVSAWT 232



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>LOC_Os12g04424:12012.t00331:unspliced-genomic strictosidine synthase 3 precursor, putative, expressed|
          Length = 5712

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3 / -3

                                          
Query: 117  QIICSRCSAWLRGMELTGGASSLCWHRLQP 206
            +++ SR  +  +G +LT   SSL WH  QP
Sbjct: 5242 ELVASRLLSLAKGKKLTTQRSSLSWHEDQP 5153



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>LOC_Os08g01550:12008.t00054:unspliced-genomic hypothetical protein|
          Length = 669

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3 / +2

                                           
Query: 255 RGQRKTKRRMTRRGWTTFTRGITRITSVSWKA 350
           R +R+ KRR  RRGWT   R  T  T    +A
Sbjct: 311 RRRRRRKRRRRRRGWTVSGRTSTTTTQPGRRA 406



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>LOC_Os05g46520:12005.t04138:unspliced-genomic polygalacturonase precursor, putative, expressed|
          Length = 2490

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = +3 / +1

                                                                       
Query: 75  EGRSQQLHLFINQRQIICSRCSAWLRGMELTGGASSLCWHRLQPYPRPVNQGRRYCKIM* 254
           +G  Q L        I  S  S  L    +  G+S L  HR    PR V  GRR  + M 
Sbjct: 373 QGGDQALRTHTPPHTISASSISCALSTSLIASGSSDLRQHRRAGEPRRVAGGRRRRRRMA 552

                         
Query: 255 RGQRKTKRRMTRRG 296
             +R+ +    RRG
Sbjct: 553 PLRRRQRPDAERRG 594



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>LOC_Os05g43050:12005.t03798:unspliced-genomic conserved hypothetical protein|
          Length = 1202

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3 / +1

                                
Query: 255 RGQRKTKRRMTRRGWTTFTRG 317
           RG+  T RR T   WTT TRG
Sbjct: 778 RGRSSTTRRETTAAWTTSTRG 840



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>LOC_Os05g35266:12005.t004767:unspliced-genomic beta-1,3-galactosyltransferase sqv-2, putative, expressed|
          Length = 3359

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -3 / -3

                                                       
Query: 196  RCQQSEDAPPVNSIPLSQAEQRLQMICR*LMKR*SCCDRPSDC 68
            RC +S  APP  S P + A +     C    +  SCC  P  C
Sbjct: 1899 RCARSRTAPPPPSPPAAAASRPSAPTCPGASRAASCC*TPC*C 1771



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>LOC_Os05g33200:12005.t02915:unspliced-genomic retrotransposon protein, putative, Ty1-copia subclass|
          Length = 2886

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3 / +3

                                   
Query: 499  IFLYKSCFSYFGGWRGAVMLNTS 431
            IFL KSCF ++GG  G VM   S
Sbjct: 1032 IFL*KSCFFFWGGGGGGVMKRVS 1100



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>LOC_Os02g57980:12002.t05369:unspliced-genomic ATP-dependent RNA helicase dbp4, putative, expressed|
          Length = 4968

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2 / -1

                                  
Query: 458  AWCCHAQH*LATCSCQATREFL 393
            AW C  QH L  CS QA R+ L
Sbjct: 4689 AWSCLFQHHLLNCSSQAMRDML 4624



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>LOC_Os01g11160:12001.t00989:unspliced-genomic cationic amino acid transporter 4, putative, expressed|
          Length = 2295

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3 / -2

                                                            
Query: 183  LCWHRLQPYPRPVNQGRRYCKIM*RGQRKTKRRMTRRGWTTFTRGITR 326
            L W R +P P    +GR   +   R +R++ RR  RR W    R  +R
Sbjct: 2021 LRWQRPRPPPSHRPRGRHQRRPPRRRRRRSTRRARRRRWRAARRARSR 1878



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>LOC_Os05g25830:12005.t02238:unspliced-genomic conserved hypothetical protein|
          Length = 2743

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1 / -1

                                                 
Query: 519 RTSPPKEFSYTKAVSAILVVGVVLSCSTLASYLFLSSH 406
           +T+P  E SYT  +   L + + L CS  +  L   +H
Sbjct: 955 KTTPSPEISYTNNLHCWLTISLCLCCSLFSPVLIACAH 842



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>LOC_Os01g64020:12001.t05770:unspliced-genomic transcription factor HBP-1b, putative, expressed|
          Length = 7365

 Score = 30.9 bits (61), Expect = 9.6
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -1 / +1

                                      
Query: 498  FSYTKAVSAILVVGVVLSCSTLASYL 421
            FS ++++S  LV+G V +CS++ SY+
Sbjct: 3490 FSLSRSLSLFLVLGHVFACSSIFSYM 3567


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 237,115,088
Number of extensions: 3239907
Number of successful extensions: 14392
Number of sequences better than 10.0: 30
Length of query: 224
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 176
Effective length of database: 52,912,542
Effective search space: 9312607392
Effective search space used: 9312607392
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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