ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf99j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108727:Os01g0657000 82 3e-16
2AK062517:Os05g0217000 66 2e-11
3AK069678:Os02g0264800 63 2e-10
4AK111253:Os01g0592500 34 0.082
5Os09g0532800:Os09g0532800 29 2.0
6AK107526:Os05g0498200 29 2.0
7AK059857:Os06g0332900 29 2.6
8AF259978: 28 3.4
9Os08g0360700:Os08g0360700 28 3.5
10AK064099:Os09g0103600 28 5.8
11AK107550:Os11g0593500 27 9.9

>AK108727:Os01g0657000 |
          Length = 69
 Score = 82.0 bits (201), Expect = 3e-16
 Identities = 50/70 (71%), Positives = 53/70 (75%)
 Frame = +1

Query: 127 MALFSRASSLVAMAIVVVLASVXXXXXXXXXXXXSDGTSVDQGIAYVLMFVALALTYLIH 306
           MAL SRAS LV MAIV +LA++            SDGTSVDQGIAYVLMFVALALTYLIH
Sbjct: 1   MALISRASVLV-MAIVAMLATLVNAQAPAPAPT-SDGTSVDQGIAYVLMFVALALTYLIH 58

Query: 307 PLDASSAYSL 336
           PLDASSAY L
Sbjct: 59  PLDASSAYKL 68



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>AK062517:Os05g0217000 |
          Length = 67

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 32/36 (88%), Positives = 33/36 (91%)
 Frame = +1

Query: 229 SDGTSVDQGIAYVLMFVALALTYLIHPLDASSAYSL 336
           SDGTSVDQGIAY+LM VAL LTYLIHPLDASSAY L
Sbjct: 31  SDGTSVDQGIAYLLMIVALVLTYLIHPLDASSAYKL 66



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>AK069678:Os02g0264800 |
          Length = 73

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +1

Query: 127 MALFSRA--SSLVAMAIVVVLASVXXXXXXXXXXXXSDGTSVDQGIAYVLMFVALALTYL 300
           MA+ +RA    +  +A++VV   +            SDGTS+D GIAY+LM VAL LTYL
Sbjct: 1   MAVAARAPLGVVAVVAVLVVGIFMPAAAQAPAPAPVSDGTSIDLGIAYILMLVALVLTYL 60

Query: 301 IHPLDASSAYSL 336
           IHPLDASS Y L
Sbjct: 61  IHPLDASSPYKL 72



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>AK111253:Os01g0592500 |
          Length = 65

 Score = 33.9 bits (76), Expect = 0.082
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +1

Query: 232 DGTSVDQGIAYVLMFVALALTYLIH 306
           D  ++DQ IAY+LMF AL +TY  H
Sbjct: 41  DAKAIDQAIAYLLMFAALFVTYFSH 65



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>Os09g0532800:Os09g0532800 |
          Length = 422

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 14/22 (63%), Positives = 14/22 (63%)
 Frame = +3

Query: 246 GPRDRVRAHVRGACPHLPHPPA 311
           GPR  VRAH   A P LP PPA
Sbjct: 39  GPRLPVRAHAITASPMLPSPPA 60



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>AK107526:Os05g0498200 |
          Length = 196

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -1

Query: 381 SLHRMDMAGPELRSEEAVGGGGVQ-RVDEVGEGKRHEHEHVRDPLV 247
           ++HR     P +     VGGGGV   V+ V   +  EHEH+ + ++
Sbjct: 50  AVHRGRRGVPRIGRGGGVGGGGVTVPVEHVARRRLQEHEHLNEEML 95



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>AK059857:Os06g0332900 |
          Length = 318

 Score = 28.9 bits (63), Expect = 2.6
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = -2

Query: 104 RGWGS----YLSRSPPSRSGDQERKGRHKRRGWRFFC 6
           RGWGS    Y +RSPP  +G      + +R G+R  C
Sbjct: 158 RGWGSDPKGYPARSPPDHAGRYADPVQRERMGFRGDC 194



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>AF259978: |
          Length = 333

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = +3

Query: 207 PCPGTHRQRWNERGPRDRVRAHVRGACPHLPHPPAGRLLR 326
           P P  H Q+     P        RGA PH P P A R LR
Sbjct: 227 PVPEKHLQQ-GRVDPASEDHERARGALPHHPRPDAHRALR 265



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>Os08g0360700:Os08g0360700 |
          Length = 179

 Score = 28.5 bits (62), Expect = 3.5
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 339 EEAVGGGGVQRVDEVGEGKRHEHEHVRD 256
           EE  GGGG    DE G G+R  H H R+
Sbjct: 92  EEQGGGGG----DEEGRGRRRRHRHRRN 115



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>AK064099:Os09g0103600 |
          Length = 392

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 152 DDALENNAMSLDDRNGRGWGSYLSRSPPSRSGDQERK-GRHKR 27
           +D  +   M +D+ NGR    +     P+R  D+ERK  RH R
Sbjct: 193 EDKEDEQPMDIDEPNGREKHDHYRGRSPTRDRDRERKHERHHR 235



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>AK107550:Os11g0593500 |
          Length = 487

 Score = 26.9 bits (58), Expect = 9.9
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 15/56 (26%)
 Frame = +3

Query: 207 PCPGTHR-----------QRWNERGPRDRVRAHVRGAC----PHLPHPPAGRLLRL 329
           PCPG HR           + W+E     R   +V G C     +L H P+G LL +
Sbjct: 263 PCPGPHRPSPVARKVFHEREWSE-SLASRFLENVHGLCGIPFRYLVHTPSGELLHV 317


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,085,109
Number of extensions: 274803
Number of successful extensions: 1037
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1035
Number of HSP's successfully gapped: 11
Length of query: 196
Length of database: 15,399,855
Length adjustment: 95
Effective length of query: 101
Effective length of database: 11,595,960
Effective search space: 1171191960
Effective search space used: 1171191960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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