Clone Name | FLbaf99j03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK108727:Os01g0657000 | 82 | 3e-16 | 2 | AK062517:Os05g0217000 | 66 | 2e-11 | 3 | AK069678:Os02g0264800 | 63 | 2e-10 | 4 | AK111253:Os01g0592500 | 34 | 0.082 | 5 | Os09g0532800:Os09g0532800 | 29 | 2.0 | 6 | AK107526:Os05g0498200 | 29 | 2.0 | 7 | AK059857:Os06g0332900 | 29 | 2.6 | 8 | AF259978: | 28 | 3.4 | 9 | Os08g0360700:Os08g0360700 | 28 | 3.5 | 10 | AK064099:Os09g0103600 | 28 | 5.8 | 11 | AK107550:Os11g0593500 | 27 | 9.9 |
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>AK108727:Os01g0657000 | Length = 69 Score = 82.0 bits (201), Expect = 3e-16 Identities = 50/70 (71%), Positives = 53/70 (75%) Frame = +1 Query: 127 MALFSRASSLVAMAIVVVLASVXXXXXXXXXXXXSDGTSVDQGIAYVLMFVALALTYLIH 306 MAL SRAS LV MAIV +LA++ SDGTSVDQGIAYVLMFVALALTYLIH Sbjct: 1 MALISRASVLV-MAIVAMLATLVNAQAPAPAPT-SDGTSVDQGIAYVLMFVALALTYLIH 58 Query: 307 PLDASSAYSL 336 PLDASSAY L Sbjct: 59 PLDASSAYKL 68
>AK062517:Os05g0217000 | Length = 67 Score = 65.9 bits (159), Expect = 2e-11 Identities = 32/36 (88%), Positives = 33/36 (91%) Frame = +1 Query: 229 SDGTSVDQGIAYVLMFVALALTYLIHPLDASSAYSL 336 SDGTSVDQGIAY+LM VAL LTYLIHPLDASSAY L Sbjct: 31 SDGTSVDQGIAYLLMIVALVLTYLIHPLDASSAYKL 66
>AK069678:Os02g0264800 | Length = 73 Score = 62.8 bits (151), Expect = 2e-10 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 2/72 (2%) Frame = +1 Query: 127 MALFSRA--SSLVAMAIVVVLASVXXXXXXXXXXXXSDGTSVDQGIAYVLMFVALALTYL 300 MA+ +RA + +A++VV + SDGTS+D GIAY+LM VAL LTYL Sbjct: 1 MAVAARAPLGVVAVVAVLVVGIFMPAAAQAPAPAPVSDGTSIDLGIAYILMLVALVLTYL 60 Query: 301 IHPLDASSAYSL 336 IHPLDASS Y L Sbjct: 61 IHPLDASSPYKL 72
>AK111253:Os01g0592500 | Length = 65 Score = 33.9 bits (76), Expect = 0.082 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = +1 Query: 232 DGTSVDQGIAYVLMFVALALTYLIH 306 D ++DQ IAY+LMF AL +TY H Sbjct: 41 DAKAIDQAIAYLLMFAALFVTYFSH 65
>Os09g0532800:Os09g0532800 | Length = 422 Score = 29.3 bits (64), Expect = 2.0 Identities = 14/22 (63%), Positives = 14/22 (63%) Frame = +3 Query: 246 GPRDRVRAHVRGACPHLPHPPA 311 GPR VRAH A P LP PPA Sbjct: 39 GPRLPVRAHAITASPMLPSPPA 60
>AK107526:Os05g0498200 | Length = 196 Score = 29.3 bits (64), Expect = 2.0 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -1 Query: 381 SLHRMDMAGPELRSEEAVGGGGVQ-RVDEVGEGKRHEHEHVRDPLV 247 ++HR P + VGGGGV V+ V + EHEH+ + ++ Sbjct: 50 AVHRGRRGVPRIGRGGGVGGGGVTVPVEHVARRRLQEHEHLNEEML 95
>AK059857:Os06g0332900 | Length = 318 Score = 28.9 bits (63), Expect = 2.6 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = -2 Query: 104 RGWGS----YLSRSPPSRSGDQERKGRHKRRGWRFFC 6 RGWGS Y +RSPP +G + +R G+R C Sbjct: 158 RGWGSDPKGYPARSPPDHAGRYADPVQRERMGFRGDC 194
>AF259978: | Length = 333 Score = 28.5 bits (62), Expect = 3.4 Identities = 16/40 (40%), Positives = 17/40 (42%) Frame = +3 Query: 207 PCPGTHRQRWNERGPRDRVRAHVRGACPHLPHPPAGRLLR 326 P P H Q+ P RGA PH P P A R LR Sbjct: 227 PVPEKHLQQ-GRVDPASEDHERARGALPHHPRPDAHRALR 265
>Os08g0360700:Os08g0360700 | Length = 179 Score = 28.5 bits (62), Expect = 3.5 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 339 EEAVGGGGVQRVDEVGEGKRHEHEHVRD 256 EE GGGG DE G G+R H H R+ Sbjct: 92 EEQGGGGG----DEEGRGRRRRHRHRRN 115
>AK064099:Os09g0103600 | Length = 392 Score = 27.7 bits (60), Expect = 5.8 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%) Frame = -2 Query: 152 DDALENNAMSLDDRNGRGWGSYLSRSPPSRSGDQERK-GRHKR 27 +D + M +D+ NGR + P+R D+ERK RH R Sbjct: 193 EDKEDEQPMDIDEPNGREKHDHYRGRSPTRDRDRERKHERHHR 235
>AK107550:Os11g0593500 | Length = 487 Score = 26.9 bits (58), Expect = 9.9 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 15/56 (26%) Frame = +3 Query: 207 PCPGTHR-----------QRWNERGPRDRVRAHVRGAC----PHLPHPPAGRLLRL 329 PCPG HR + W+E R +V G C +L H P+G LL + Sbjct: 263 PCPGPHRPSPVARKVFHEREWSE-SLASRFLENVHGLCGIPFRYLVHTPSGELLHV 317 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 14,085,109 Number of extensions: 274803 Number of successful extensions: 1037 Number of sequences better than 10.0: 11 Number of HSP's gapped: 1035 Number of HSP's successfully gapped: 11 Length of query: 196 Length of database: 15,399,855 Length adjustment: 95 Effective length of query: 101 Effective length of database: 11,595,960 Effective search space: 1171191960 Effective search space used: 1171191960 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)