Clone Information

BLAST Search Result

Clone Name	FLbaf88k09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001070288.1\| Oryza sativa (japonica cultivar-group) Os09g...	755	0.0
2	dbj\|AK110919.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	733	0.0
3	emb\|CT833226.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	563	e-157
4	dbj\|AP008215.1\| Oryza sativa (japonica cultivar-group) genomic D...	121	6e-24
5	dbj\|AP005567.3\| Oryza sativa (japonica cultivar-group) genomic D...	121	6e-24
6	gb\|AC155346.1\| Brassica rapa subsp. pekinensis chromosome Cytoge...	58	8e-05
7	ref\|NM_127710.2\| Arabidopsis thaliana unknown protein (AT2G21385...	56	3e-04
8	gb\|AY142675.1\| Arabidopsis thaliana unknown protein (At2g21385) ...	56	3e-04
9	gb\|AY045792.1\| Arabidopsis thaliana unknown protein (At2g21385) ...	56	3e-04
10	dbj\|AK118747.1\| Arabidopsis thaliana At2g21385 mRNA for unknown ...	56	3e-04
11	gb\|AC006841.7\| Arabidopsis thaliana chromosome 2 clone F3K23 map...	50	0.019
12	ref\|NM_001063821.1\| Oryza sativa (japonica cultivar-group) Os06g...	46	0.30
13	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.30
14	dbj\|AP004027.3\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.30
15	dbj\|AK065325.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.30
16	dbj\|AK243213.1\| Oryza sativa (japonica cultivar-group) cDNA, clo...	44	1.2
17	ref\|NM_001064951.1\| Oryza sativa (japonica cultivar-group) Os06g...	44	1.2
18	gb\|AC134826.4\| Mus musculus BAC clone RP24-459P6 from chromosome...	44	1.2
19	gb\|AC122379.4\| Mus musculus BAC clone RP23-476A7 from chromosome...	44	1.2
20	dbj\|AP003935.3\| Oryza sativa (japonica cultivar-group) genomic D...	44	1.2
21	gb\|AC124744.3\| Mus musculus BAC clone RP23-223E16 from 13, compl...	44	1.2
22	emb\|BX908399.33\| Zebrafish DNA sequence from clone DKEY-11K4 in ...	44	1.2
23	gb\|AC190144.3\| Pan troglodytes BAC clone CH251-456P10 from chrom...	42	4.7
24	emb\|CT836938.1\| Oryza sativa (indica cultivar-group) cDNA clone:...	42	4.7
25	emb\|CT573213.2\| Frankia alni str. ACN14A chromosome, complete se...	42	4.7
26	gb\|AE010321.1\| Methanopyrus kandleri AV19 section 20 of 157 of t...	42	4.7
27	gb\|AC134322.25\| Medicago truncatula clone mth2-17i21, complete s...	42	4.7
28	gb\|AC119857.10\| Mus musculus chromosome 3, clone RP23-257A18, co...	42	4.7
29	gb\|AC103380.13\| Mus musculus chromosome 1, clone RP24-263A16, co...	42	4.7
30	gb\|AC164002.4\| Mus musculus chromosome 3, clone RP24-114A9, comp...	42	4.7
31	gb\|AC026478.5\| Mus musculus strain C57BL6/J chromosome 5 clone R...	42	4.7
32	gb\|AC118000.14\| Mus musculus chromosome 3, clone RP23-33M9, comp...	42	4.7
33	gb\|AC121984.3\| Mus musculus BAC clone RP24-292L23 from chromosom...	42	4.7
34	gb\|AC107226.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	4.7
35	ref\|XM_535307.2\| PREDICTED: Canis familiaris similar to PAP asso...	42	4.7
36	gb\|AC090642.11\| Homo sapiens 12 BAC RP11-463N10 (Roswell Park Ca...	42	4.7
37	emb\|BX842590.1\| Rhesus DNA sequence from clone bRH-178N19, compl...	42	4.7
38	gb\|AC093181.5\| Oryza sativa chromosome 10 BAC OSJNBb0089F16 geno...	42	4.7
39	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
40	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
41	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
42	emb\|AL355879.22\| Human DNA sequence from clone RP11-520F9 on chr...	42	4.7
43	gb\|AC069282.6\| Homo sapiens BAC clone RP11-61L9 from 7, complete...	42	4.7
44	gb\|AC159283.2\| Mus musculus BAC clone RP23-317B21 from chromosom...	42	4.7
45	gb\|AC026343.17\| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Canc...	42	4.7
46	gb\|AC027239.5\|AC027239 Homo sapiens chromosome 11, clone RP11-52...	42	4.7
47	dbj\|AP003712.4\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
48	dbj\|AP003579.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
49	dbj\|AP005777.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
50	dbj\|AP005631.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	4.7
51	dbj\|AP006437.2\| Homo sapiens genomic DNA, chromosome 11 clone:RP...	42	4.7
52	gb\|AE000513.1\| Deinococcus radiodurans R1 chromosome 1, complete...	42	4.7
53	gb\|AC145743.4\| Mus musculus BAC clone RP24-171K11 from 3, comple...	42	4.7
54	gb\|M77697.5\| Caenorhabditis elegans cosmid B0303, complete sequence	42	4.7

>ref|NM_001070288.1| Oryza sativa (japonica cultivar-group) Os09g0531100 (Os09g0531100)
            mRNA, complete cds
          Length = 1483
 Score =  755 bits (381), Expect = 0.0
 Identities = 681/781 (87%)
 Strand = Plus / Plus

                                                                        
Query: 286  taaaggtcctgaagaatccttgaagaagaccattgaagtggataggctgattgatatgct 345
            |||||| || |||||||||||||||||||| |||||||| || ||| |||| || |||||
Sbjct: 261  taaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgct 320

                                                                        
Query: 346  gagagatgcaaatcccggagagcttgatctaatagtggttgaaaatattctagcgttcag 405
            ||| |||||||||||  |||||||||||| |||||||||||||||| |||| ||||||  
Sbjct: 321  gagggatgcaaatcctagagagcttgatcaaatagtggttgaaaatgttctggcgttcga 380

                                                                        
Query: 406  tgaggctttctgggttcggctggctgctcgaattgatctatgcaaatcggatgatgacaa 465
            ||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||| ||
Sbjct: 381  tgagggtttctgggttcggctggcagcaagaattgatctatgcaaatcggatgatgataa 440

                                                                        
Query: 466  aaaagattatgaagaactggcagagaatgtcatgaacatagttgaccgtgtcgtccacaa 525
            |||||| ||||||||| |||| || |||||||||||||||||||||||| | ||||| ||
Sbjct: 441  aaaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataa 500

                                                                        
Query: 526  gactgatgagaagattgaacagtcgactgatgttctgaaggcaattattagtcctgttat 585
            ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 501  gactgatgaaaagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgat 560

                                                                        
Query: 586  gaatgaaggagaagatgcgatgtggccgccaagaaatccggaggctcttaaattgatgga 645
            | | ||||| ||| | || | |||||| || ||| ||||||||||||| |||||||||||
Sbjct: 561  gcacgaaggtgaaaacgccacgtggccaccgagagatccggaggctctcaaattgatgga 620

                                                                        
Query: 646  aaaagaaatatcaaacagagaaaaagaaggacagctagatgagagttttctgtcagaagt 705
             |||||||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| ||
Sbjct: 621  gaaagaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggt 680

                                                                        
Query: 706  taatgctcagctgaggcaagctaaagaagatgtagataagccagggcttcaagtaatgct 765
            |||||||||| ||||||| |||||| |||||| |||||| ||||| |||||||  |||||
Sbjct: 681  taatgctcagttgaggcaggctaaacaagatggagataaaccaggacttcaagctatgct 740

                                                                        
Query: 766  gcagaaggtgttgcaactatatgcttacaactttctccaaaagcgtagttacgcttataa 825
            ||||||||||||||| || ||||| | ||| |||||||||||||||||||||||||| ||
Sbjct: 741  gcagaaggtgttgcagctgtatgcgtccaattttctccaaaagcgtagttacgcttacaa 800

                                                                        
Query: 826  agggggagaggttgtagtgcctgaaaagtttcttgaatcgataatagaggctcctgaaaa 885
            ||||||||| ||  ||||||||||||  |||||||||||  ||||| ||||||| |||||
Sbjct: 801  agggggagaagtaatagtgcctgaaagttttcttgaatctgtaataaaggctccggaaaa 860

                                                                        
Query: 886  tgactggaataggctgttgcttgatggacttacagttggaaagggagatgtttcacctga 945
             || ||||| | |||||||||||||||  | ||||| || || ||| |||||||||| ||
Sbjct: 861  cgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaatgtttcaccaga 920

                                                                        
Query: 946  agaattttacgctgttaccaagaagagaattgagagaatcttgattcgcacggaaggagg 1005
            ||||||||| |||||||  |||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 921  agaattttatgctgttataaagaagagaattgagagagtcttaattcgcacagaaggagg 980

                                                                        
Query: 1006 ttcttatcagcaacgggtacttgtcgaatatataaaagagatacaagctagagcagagga 1065
            |||||||||||| ||  |||| || |||||| ||||||||||||| |||||||| |||||
Sbjct: 981  ttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctagagcggagga 1040

             
Query: 1066 a 1066
            |
Sbjct: 1041 a 1041

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>dbj|AK110919.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-C12, full
            insert sequence
          Length = 1481

 Score =  733 bits (370), Expect = 0.0
 Identities = 679/781 (86%), Gaps = 2/781 (0%)
 Strand = Plus / Plus

                                                                        
Query: 286  taaaggtcctgaagaatccttgaagaagaccattgaagtggataggctgattgatatgct 345
            |||||| || |||||||||||||||||||| |||||||| || ||| |||| || |||||
Sbjct: 261  taaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgct 320

                                                                        
Query: 346  gagagatgcaaatcccggagagcttgatctaatagtggttgaaaatattctagcgttcag 405
            | ||  |||||||||  |||||||||||| |||||||||||||||| |||| ||||||  
Sbjct: 321  ggga--tgcaaatcctagagagcttgatcaaatagtggttgaaaatgttctggcgttcga 378

                                                                        
Query: 406  tgaggctttctgggttcggctggctgctcgaattgatctatgcaaatcggatgatgacaa 465
            ||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||| ||
Sbjct: 379  tgagggtttctgggttcggctggcagcaagaattgatctatgcaaatcggatgatgataa 438

                                                                        
Query: 466  aaaagattatgaagaactggcagagaatgtcatgaacatagttgaccgtgtcgtccacaa 525
            |||||| ||||||||| |||| || |||||||||||||||||||||||| | ||||| ||
Sbjct: 439  aaaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataa 498

                                                                        
Query: 526  gactgatgagaagattgaacagtcgactgatgttctgaaggcaattattagtcctgttat 585
            ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| ||
Sbjct: 499  gactgatgaaaagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgat 558

                                                                        
Query: 586  gaatgaaggagaagatgcgatgtggccgccaagaaatccggaggctcttaaattgatgga 645
            | | ||||| ||| | || | |||||| || ||| ||||||||||||| |||||||||||
Sbjct: 559  gcacgaaggtgaaaacgccacgtggccaccgagagatccggaggctctcaaattgatgga 618

                                                                        
Query: 646  aaaagaaatatcaaacagagaaaaagaaggacagctagatgagagttttctgtcagaagt 705
             |||||||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| ||
Sbjct: 619  gaaagaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggt 678

                                                                        
Query: 706  taatgctcagctgaggcaagctaaagaagatgtagataagccagggcttcaagtaatgct 765
            |||||||||| ||||||| |||||| |||||| |||||| ||||| |||||||  |||||
Sbjct: 679  taatgctcagttgaggcaggctaaacaagatggagataaaccaggacttcaagctatgct 738

                                                                        
Query: 766  gcagaaggtgttgcaactatatgcttacaactttctccaaaagcgtagttacgcttataa 825
            ||||||||||||||| || ||||| | ||| |||||||||||||||||||||||||| ||
Sbjct: 739  gcagaaggtgttgcagctgtatgcgtccaattttctccaaaagcgtagttacgcttacaa 798

                                                                        
Query: 826  agggggagaggttgtagtgcctgaaaagtttcttgaatcgataatagaggctcctgaaaa 885
            ||||||||| ||  ||||||||||||  |||||||||||  ||||| ||||||| |||||
Sbjct: 799  agggggagaagtaatagtgcctgaaagttttcttgaatctgtaataaaggctccggaaaa 858

                                                                        
Query: 886  tgactggaataggctgttgcttgatggacttacagttggaaagggagatgtttcacctga 945
             || ||||| | |||||||||||||||  | ||||| || || ||| |||||||||| ||
Sbjct: 859  cgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaatgtttcaccaga 918

                                                                        
Query: 946  agaattttacgctgttaccaagaagagaattgagagaatcttgattcgcacggaaggagg 1005
            ||||||||| |||||||  |||||||||||||||||| |||| |||||||| ||||||||
Sbjct: 919  agaattttatgctgttataaagaagagaattgagagagtcttaattcgcacagaaggagg 978

                                                                        
Query: 1006 ttcttatcagcaacgggtacttgtcgaatatataaaagagatacaagctagagcagagga 1065
            |||||||||||| ||  |||| || |||||| ||||||||||||| |||||||| |||||
Sbjct: 979  ttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctagagcggagga 1038

             
Query: 1066 a 1066
            |
Sbjct: 1039 a 1039

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>emb|CT833226.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA242P17, full
            insert sequence
          Length = 2114

 Score =  563 bits (284), Expect = e-157
 Identities = 521/600 (86%)
 Strand = Plus / Plus

                                                                        
Query: 467  aaagattatgaagaactggcagagaatgtcatgaacatagttgaccgtgtcgtccacaag 526
            ||||| ||||||||| |||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 1128 aaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataag 1187

                                                                        
Query: 527  actgatgagaagattgaacagtcgactgatgttctgaaggcaattattagtcctgttatg 586
            |||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||
Sbjct: 1188 actgatgaaaagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgatg 1247

                                                                        
Query: 587  aatgaaggagaagatgcgatgtggccgccaagaaatccggaggctcttaaattgatggaa 646
             | ||||| ||| | || | |||||| || ||| ||||||||||||| ||||||||||| 
Sbjct: 1248 cacgaaggtgaaaacgccacgtggccaccgagagatccggaggctctcaaattgatggag 1307

                                                                        
Query: 647  aaagaaatatcaaacagagaaaaagaaggacagctagatgagagttttctgtcagaagtt 706
            |||||||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| |||
Sbjct: 1308 aaagaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggtt 1367

                                                                        
Query: 707  aatgctcagctgaggcaagctaaagaagatgtagataagccagggcttcaagtaatgctg 766
            ||||||||| ||||||| |||||| |||||| |||||| ||||| |||||||  ||||||
Sbjct: 1368 aatgctcagttgaggcaggctaaacaagatggagataaaccaggacttcaagctatgctg 1427

                                                                        
Query: 767  cagaaggtgttgcaactatatgcttacaactttctccaaaagcgtagttacgcttataaa 826
            |||||||||||||| || ||||| | ||| |||||||||||||||||||||||||| |||
Sbjct: 1428 cagaaggtgttgcagctgtatgcgtccaattttctccaaaagcgtagttacgcttacaaa 1487

                                                                        
Query: 827  gggggagaggttgtagtgcctgaaaagtttcttgaatcgataatagaggctcctgaaaat 886
            |||||||| ||  ||||||||||||  |||||||||||  ||||| ||||||| ||||| 
Sbjct: 1488 gggggagaagtaatagtgcctgaaagttttcttgaatctgtaataaaggctccggaaaac 1547

                                                                        
Query: 887  gactggaataggctgttgcttgatggacttacagttggaaagggagatgtttcacctgaa 946
            || ||||| | |||||||||||||||  | ||||| || || ||| |||||||||| |||
Sbjct: 1548 gagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaatgtttcaccagaa 1607

                                                                        
Query: 947  gaattttacgctgttaccaagaagagaattgagagaatcttgattcgcacggaaggaggt 1006
            |||||||| |||||||  |||||||||||||||||| |||| |||||||| |||||||||
Sbjct: 1608 gaattttatgctgttataaagaagagaattgagagagtcttaattcgcacagaaggaggt 1667

                                                                        
Query: 1007 tcttatcagcaacgggtacttgtcgaatatataaaagagatacaagctagagcagaggaa 1066
            ||||||||||| ||  |||| || |||||| ||||||||||||| |||||||| ||||||
Sbjct: 1668 tcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctagagcggaggaa 1727



 Score =  192 bits (97), Expect = 2e-45
 Identities = 157/177 (88%)
 Strand = Plus / Plus

                                                                        
Query: 286  taaaggtcctgaagaatccttgaagaagaccattgaagtggataggctgattgatatgct 345
            |||||| || |||||||||||||||||||| |||||||| || ||| |||| || |||||
Sbjct: 837  taaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgct 896

                                                                        
Query: 346  gagagatgcaaatcccggagagcttgatctaatagtggttgaaaatattctagcgttcag 405
            ||| |||||||||||  |||||||||||| |||||||||||||||| |||| ||||||  
Sbjct: 897  gagggatgcaaatcctagagagcttgatcaaatagtggttgaaaatgttctggcgttcga 956

                                                                     
Query: 406  tgaggctttctgggttcggctggctgctcgaattgatctatgcaaatcggatgatga 462
            ||||| |||||||||||||||||| ||  ||||||||||||||||||||||||||||
Sbjct: 957  tgagggtttctgggttcggctggcagcaagaattgatctatgcaaatcggatgatga 1013

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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  121 bits (61), Expect = 6e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                            
Query: 366      agcttgatctaatagtggttgaaaatattctagcgttcagtgaggctttctgggttcggc 425
                ||||||||| |||||||||||||||| |||| ||||||  ||||| ||||||||||||||
Sbjct: 20499867 agcttgatcaaatagtggttgaaaatgttctggcgttcgatgagggtttctgggttcggc 20499808

                                                     
Query: 426      tggctgctcgaattgatctatgcaaatcggatgatga 462
                |||| ||  ||||||||||||||||||||||||||||
Sbjct: 20499807 tggcagcaagaattgatctatgcaaatcggatgatga 20499771



 Score =  111 bits (56), Expect = 6e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                            
Query: 725      gctaaagaagatgtagataagccagggcttcaagtaatgctgcagaaggtgttgcaacta 784
                |||||| |||||| |||||| ||||| |||||||  |||||||||||||||||||| || 
Sbjct: 20498934 gctaaacaagatggagataaaccaggacttcaagctatgctgcagaaggtgttgcagctg 20498875

                                                            
Query: 785      tatgcttacaactttctccaaaagcgtagttacgcttataaagg 828
                ||||| | ||| |||||||||||||||||||||||||| |||||
Sbjct: 20498874 tatgcgtccaattttctccaaaagcgtagttacgcttacaaagg 20498831



 Score =  109 bits (55), Expect = 2e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                            
Query: 536      aagattgaacagtcgactgatgttctgaaggcaattattagtcctgttatgaatgaagga 595
                |||||||||||||| |||||||| ||||||||||||||||||||||| ||| | ||||| 
Sbjct: 20499475 aagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgatgcacgaaggt 20499416

                                                                       
Query: 596      gaagatgcgatgtggccgccaagaaatccggaggctcttaaattgatggaaaaag 650
                ||| | || | |||||| || ||| ||||||||||||| ||||||||||| ||||
Sbjct: 20499415 gaaaacgccacgtggccaccgagagatccggaggctctcaaattgatggagaaag 20499361



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                            
Query: 875      gctcctgaaaatgactggaataggctgttgcttgatggacttacagttggaaagggagat 934
                ||||| ||||| || ||||| | |||||||||||||||  | ||||| || || ||| ||
Sbjct: 20498613 gctccggaaaacgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaat 20498554

                                                                            
Query: 935      gtttcacctgaagaattttacgctgttaccaagaagagaattgagagaatcttgattcgc 994
                |||||||| ||||||||||| |||||||  |||||||||||||||||| |||| ||||||
Sbjct: 20498553 gtttcaccagaagaattttatgctgttataaagaagagaattgagagagtcttaattcgc 20498494

                  
Query: 995      ac 996
                ||
Sbjct: 20498493 ac 20498492



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 650      gaaatatcaaacagagaaaaagaaggacagctagatgagagttttctgtcagaagttaat 709
                ||||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| ||||||
Sbjct: 20499112 gaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggttaat 20499053

                              
Query: 710      gctcagctgaggca 723
                |||||| |||||||
Sbjct: 20499052 gctcagttgaggca 20499039



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                            
Query: 467      aaagattatgaagaactggcagagaatgtcatgaacatagttgaccgtgtcgtccacaag 526
                ||||| ||||||||| |||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 20499656 aaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataag 20499597

                       
Query: 527      actgatg 533
                |||||||
Sbjct: 20499596 actgatg 20499590



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 286      taaaggtcctgaagaatccttgaagaagaccattgaagtggataggctgattgatatgct 345
                |||||| || |||||||||||||||||||| |||||||| || ||| |||| || |||||
Sbjct: 20500608 taaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgct 20500549

                               
Query: 346      gagagatgcaaatcc 360
                ||| |||||||||||
Sbjct: 20500548 gagggatgcaaatcc 20500534



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 997      ggaaggaggttcttatcagcaacgggtacttgtcgaatatataaaagagatacaagctag 1056
                ||||||||||||||||||||| ||  |||| || |||||| ||||||||||||| |||||
Sbjct: 20498363 ggaaggaggttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctag 20498304

                          
Query: 1057     agcagaggaa 1066
                ||| ||||||
Sbjct: 20498303 agcggaggaa 20498294

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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score =  121 bits (61), Expect = 6e-24
 Identities = 88/97 (90%)
 Strand = Plus / Minus

                                                                         
Query: 366   agcttgatctaatagtggttgaaaatattctagcgttcagtgaggctttctgggttcggc 425
             ||||||||| |||||||||||||||| |||| ||||||  ||||| ||||||||||||||
Sbjct: 17514 agcttgatcaaatagtggttgaaaatgttctggcgttcgatgagggtttctgggttcggc 17455

                                                  
Query: 426   tggctgctcgaattgatctatgcaaatcggatgatga 462
             |||| ||  ||||||||||||||||||||||||||||
Sbjct: 17454 tggcagcaagaattgatctatgcaaatcggatgatga 17418



 Score =  111 bits (56), Expect = 6e-21
 Identities = 92/104 (88%)
 Strand = Plus / Minus

                                                                         
Query: 725   gctaaagaagatgtagataagccagggcttcaagtaatgctgcagaaggtgttgcaacta 784
             |||||| |||||| |||||| ||||| |||||||  |||||||||||||||||||| || 
Sbjct: 16581 gctaaacaagatggagataaaccaggacttcaagctatgctgcagaaggtgttgcagctg 16522

                                                         
Query: 785   tatgcttacaactttctccaaaagcgtagttacgcttataaagg 828
             ||||| | ||| |||||||||||||||||||||||||| |||||
Sbjct: 16521 tatgcgtccaattttctccaaaagcgtagttacgcttacaaagg 16478



 Score =  109 bits (55), Expect = 2e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                         
Query: 536   aagattgaacagtcgactgatgttctgaaggcaattattagtcctgttatgaatgaagga 595
             |||||||||||||| |||||||| ||||||||||||||||||||||| ||| | ||||| 
Sbjct: 17122 aagattgaacagtcaactgatgtgctgaaggcaattattagtcctgtgatgcacgaaggt 17063

                                                                    
Query: 596   gaagatgcgatgtggccgccaagaaatccggaggctcttaaattgatggaaaaag 650
             ||| | || | |||||| || ||| ||||||||||||| ||||||||||| ||||
Sbjct: 17062 gaaaacgccacgtggccaccgagagatccggaggctctcaaattgatggagaaag 17008



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 875   gctcctgaaaatgactggaataggctgttgcttgatggacttacagttggaaagggagat 934
             ||||| ||||| || ||||| | |||||||||||||||  | ||||| || || ||| ||
Sbjct: 16260 gctccggaaaacgagtggaacaagctgttgcttgatgggttaacagtggggaaaggaaat 16201

                                                                         
Query: 935   gtttcacctgaagaattttacgctgttaccaagaagagaattgagagaatcttgattcgc 994
             |||||||| ||||||||||| |||||||  |||||||||||||||||| |||| ||||||
Sbjct: 16200 gtttcaccagaagaattttatgctgttataaagaagagaattgagagagtcttaattcgc 16141

               
Query: 995   ac 996
             ||
Sbjct: 16140 ac 16139



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 650   gaaatatcaaacagagaaaaagaaggacagctagatgagagttttctgtcagaagttaat 709
             ||||| ||||| ||||||||||||||||||||||| ||  | ||||||||||| ||||||
Sbjct: 16759 gaaatttcaaatagagaaaaagaaggacagctagacgaaggatttctgtcagaggttaat 16700

                           
Query: 710   gctcagctgaggca 723
             |||||| |||||||
Sbjct: 16699 gctcagttgaggca 16686



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 467   aaagattatgaagaactggcagagaatgtcatgaacatagttgaccgtgtcgtccacaag 526
             ||||| ||||||||| |||| || |||||||||||||||||||||||| | ||||| |||
Sbjct: 17303 aaagactatgaagaattggctgaaaatgtcatgaacatagttgaccgtcttgtccataag 17244

                    
Query: 527   actgatg 533
             |||||||
Sbjct: 17243 actgatg 17237



 Score = 77.8 bits (39), Expect = 8e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 286   taaaggtcctgaagaatccttgaagaagaccattgaagtggataggctgattgatatgct 345
             |||||| || |||||||||||||||||||| |||||||| || ||| |||| || |||||
Sbjct: 18255 taaaggcccagaagaatccttgaagaagacaattgaagttgacaggttgatcgagatgct 18196

                            
Query: 346   gagagatgcaaatcc 360
             ||| |||||||||||
Sbjct: 18195 gagggatgcaaatcc 18181



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                         
Query: 997   ggaaggaggttcttatcagcaacgggtacttgtcgaatatataaaagagatacaagctag 1056
             ||||||||||||||||||||| ||  |||| || |||||| ||||||||||||| |||||
Sbjct: 16010 ggaaggaggttcttatcagcagcgcatactcgttgaatatctaaaagagatacaggctag 15951

                       
Query: 1057  agcagaggaa 1066
             ||| ||||||
Sbjct: 15950 agcggaggaa 15941

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>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH081N08, complete sequence
          Length = 56991

 Score = 58.0 bits (29), Expect = 8e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 665   gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagct 717
             ||||||||||||||  |||||||  ||||||| |||||||||| |||||||||
Sbjct: 48651 gaaaaagaaggacaattagatgaaggttttctttcagaagttagtgctcagct 48703

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>ref|NM_127710.2| Arabidopsis thaliana unknown protein (AT2G21385) mRNA, complete cds
          Length = 1178

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 665 gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagctgaggcaa 724
           ||||||||||| ||  |||||||  | ||||| ||||||||||||||||||||  |||| 
Sbjct: 651 gaaaaagaagggcaattagatgaaggatttctttcagaagttaatgctcagctccggcag 710

                       
Query: 725 gctaaagaagat 736
           || |||||||||
Sbjct: 711 gcaaaagaagat 722

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>gb|AY142675.1| Arabidopsis thaliana unknown protein (At2g21385) mRNA, complete cds
          Length = 1024

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 665 gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagctgaggcaa 724
           ||||||||||| ||  |||||||  | ||||| ||||||||||||||||||||  |||| 
Sbjct: 568 gaaaaagaagggcaattagatgaaggatttctttcagaagttaatgctcagctccggcag 627

                       
Query: 725 gctaaagaagat 736
           || |||||||||
Sbjct: 628 gcaaaagaagat 639

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>gb|AY045792.1| Arabidopsis thaliana unknown protein (At2g21385) mRNA, complete cds
          Length = 1199

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 665 gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagctgaggcaa 724
           ||||||||||| ||  |||||||  | ||||| ||||||||||||||||||||  |||| 
Sbjct: 651 gaaaaagaagggcaattagatgaaggatttctttcagaagttaatgctcagctccggcag 710

                       
Query: 725 gctaaagaagat 736
           || |||||||||
Sbjct: 711 gcaaaagaagat 722

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>dbj|AK118747.1| Arabidopsis thaliana At2g21385 mRNA for unknown protein, complete
           cds, clone: RAFL21-09-L06
          Length = 1142

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 665 gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagctgaggcaa 724
           ||||||||||| ||  |||||||  | ||||| ||||||||||||||||||||  |||| 
Sbjct: 639 gaaaaagaagggcaattagatgaaggatttctttcagaagttaatgctcagctccggcag 698

                       
Query: 725 gctaaagaagat 736
           || |||||||||
Sbjct: 699 gcaaaagaagat 710

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>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete
             sequence
          Length = 125045

 Score = 50.1 bits (25), Expect = 0.019
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 665   gaaaaagaaggacagctagatgagagttttctgtcagaagttaatgctcagct 717
             ||||||||||| ||  |||||||  | ||||| ||||||||||||||||||||
Sbjct: 47954 gaaaaagaagggcaattagatgaaggatttctttcagaagttaatgctcagct 48006

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>ref|NM_001063821.1| Oryza sativa (japonica cultivar-group) Os06g0247900 (Os06g0247900)
           mRNA, partial cds
          Length = 1592

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 143 ccgccgccgtccccgtctccgtc 165
           |||||||||||||||||||||||
Sbjct: 900 ccgccgccgtccccgtctccgtc 878

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 143     ccgccgccgtccccgtctccgtc 165
               |||||||||||||||||||||||
Sbjct: 7682766 ccgccgccgtccccgtctccgtc 7682788



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 902      ttgcttgatggacttacagttg 923
                ||||||||||||||||||||||
Sbjct: 28388560 ttgcttgatggacttacagttg 28388539



 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 143      ccgccgccgtccccgtctccgtccc 167
                ||||||||||||||||| |||||||
Sbjct: 26520134 ccgccgccgtccccgtccccgtccc 26520158

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>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OJ1136_C11
          Length = 124827

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 143    ccgccgccgtccccgtctccgtc 165
              |||||||||||||||||||||||
Sbjct: 106021 ccgccgccgtccccgtctccgtc 106043

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>dbj|AK065325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002P24, full
           insert sequence
          Length = 1596

 Score = 46.1 bits (23), Expect = 0.30
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 143 ccgccgccgtccccgtctccgtc 165
           |||||||||||||||||||||||
Sbjct: 902 ccgccgccgtccccgtctccgtc 880

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>dbj|AK243213.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100042N09,
           full insert sequence
          Length = 2151

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 902 ttgcttgatggacttacagttg 923
           ||||||||||||||||||||||
Sbjct: 848 ttgcttgatggacttacagttg 869

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>ref|NM_001064951.1| Oryza sativa (japonica cultivar-group) Os06g0690200 (Os06g0690200)
           mRNA, complete cds
          Length = 1626

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 902 ttgcttgatggacttacagttg 923
           ||||||||||||||||||||||
Sbjct: 766 ttgcttgatggacttacagttg 787

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>gb|AC134826.4| Mus musculus BAC clone RP24-459P6 from chromosome 13, complete sequence
          Length = 168202

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 873   aggctcctgaaaatgactggaa 894
             ||||||||||||||||||||||
Sbjct: 52340 aggctcctgaaaatgactggaa 52319

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>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence
          Length = 171737

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 873   aggctcctgaaaatgactggaa 894
             ||||||||||||||||||||||
Sbjct: 10117 aggctcctgaaaatgactggaa 10096

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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0661G04
          Length = 157292

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 902    ttgcttgatggacttacagttg 923
              ||||||||||||||||||||||
Sbjct: 101138 ttgcttgatggacttacagttg 101117

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>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence
          Length = 199767

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 873   aggctcctgaaaatgactggaa 894
             ||||||||||||||||||||||
Sbjct: 29615 aggctcctgaaaatgactggaa 29636

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>emb|BX908399.33| Zebrafish DNA sequence from clone DKEY-11K4 in linkage group 18,
             complete sequence
          Length = 106712

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 553   tgatgttctgaaggcaattattagtc 578
             |||||||||||||| |||||||||||
Sbjct: 92526 tgatgttctgaaggaaattattagtc 92551

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>gb|AC190144.3| Pan troglodytes BAC clone CH251-456P10 from chromosome 7, complete
              sequence
          Length = 222775

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 629    gctcttaaattgatggaaaaa 649
              |||||||||||||||||||||
Sbjct: 219045 gctcttaaattgatggaaaaa 219065

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>emb|CT836938.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113F08, full
            insert sequence
          Length = 1975

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1130 ctaattatatccaataaatga 1150
            |||||||||||||||||||||
Sbjct: 912  ctaattatatccaataaatga 892

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>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 112     ggcgacggccaccgcctccac 132
               |||||||||||||||||||||
Sbjct: 6500473 ggcgacggccaccgcctccac 6500453

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>gb|AE010321.1| Methanopyrus kandleri AV19 section 20 of 157 of the complete genome
          Length = 10647

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  acggccaccgcctccacgtcg 136
            |||||||||||||||||||||
Sbjct: 7332 acggccaccgcctccacgtcg 7352

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>gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete sequence
          Length = 136954

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 633    ttaaattgatggaaaaagaaa 653
              |||||||||||||||||||||
Sbjct: 118965 ttaaattgatggaaaaagaaa 118945

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>gb|AC119857.10| Mus musculus chromosome 3, clone RP23-257A18, complete sequence
          Length = 152106

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 671    gaaggacagctagatgagagt 691
              |||||||||||||||||||||
Sbjct: 127346 gaaggacagctagatgagagt 127326

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>gb|AC103380.13| Mus musculus chromosome 1, clone RP24-263A16, complete sequence
          Length = 173136

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 874    ggctcctgaaaatgactggaa 894
              |||||||||||||||||||||
Sbjct: 122503 ggctcctgaaaatgactggaa 122483

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>gb|AC164002.4| Mus musculus chromosome 3, clone RP24-114A9, complete sequence
          Length = 198340

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 671    gaaggacagctagatgagagt 691
              |||||||||||||||||||||
Sbjct: 137716 gaaggacagctagatgagagt 137736

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>gb|AC026478.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-135F23, complete
             sequence
          Length = 188103

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 874   ggctcctgaaaatgactggaa 894
             |||||||||||||||||||||
Sbjct: 70662 ggctcctgaaaatgactggaa 70682

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>gb|AC118000.14| Mus musculus chromosome 3, clone RP23-33M9, complete sequence
          Length = 167218

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 73    ccctcccctccccacttcgctcccgccac 101
             |||||||||||||||||| ||||| ||||
Sbjct: 65056 ccctcccctccccacttccctccccccac 65084

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>gb|AC121984.3| Mus musculus BAC clone RP24-292L23 from chromosome 3, complete
            sequence
          Length = 145348

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 73   ccctcccctccccacttcgctcccgccac 101
            |||||||||||||||||| ||||| ||||
Sbjct: 9879 ccctcccctccccacttccctccccccac 9851

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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   gctccgcccgccgccgtcccc 156
             |||||||||||||||||||||
Sbjct: 79820 gctccgcccgccgccgtcccc 79840

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>ref|XM_535307.2| PREDICTED: Canis familiaris similar to PAP associated domain
           containing 5 (Topoisomerase-related function protein
           4-2) (TRF4-2) (LOC478131), mRNA
          Length = 2828

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 143 ccgccgccgtccccgtctccgtccc 167
           ||||||||||||||||| |||||||
Sbjct: 259 ccgccgccgtccccgtccccgtccc 283

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>gb|AC090642.11| Homo sapiens 12 BAC RP11-463N10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 177607

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 960    ttaccaagaagagaattgaga 980
              |||||||||||||||||||||
Sbjct: 148803 ttaccaagaagagaattgaga 148783

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>emb|BX842590.1| Rhesus DNA sequence from clone bRH-178N19, complete sequence
          Length = 114431

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 999   aaggaggttcttatcagcaac 1019
             |||||||||||||||||||||
Sbjct: 27230 aaggaggttcttatcagcaac 27210

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>gb|AC093181.5| Oryza sativa chromosome 10 BAC OSJNBb0089F16 genomic sequence, complete
             sequence
          Length = 154696

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 139   ccgcccgccgccgtccccgtctccg 163
             |||||||||||| ||||||||||||
Sbjct: 55038 ccgcccgccgccttccccgtctccg 55062

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 139      ccgcccgccgccgtccccgtctccg 163
                |||||||||||| ||||||||||||
Sbjct: 10896928 ccgcccgccgccttccccgtctccg 10896952

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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 143     ccgccgccgtccccgtctccgtccc 167
               ||||||||||||||||| |||||||
Sbjct: 9147399 ccgccgccgtccccgtccccgtccc 9147375

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 136     gctccgcccgccgccgtcccc 156
               |||||||||||||||||||||
Sbjct: 6536271 gctccgcccgccgccgtcccc 6536291

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>emb|AL355879.22| Human DNA sequence from clone RP11-520F9 on chromosome 13 Contains a
             nuclear transcription factor Y alpha (NFYA) pseudogene and
             the 3' end of a novel gene (FLJ32909), complete sequence
          Length = 73811

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 910   tggacttacagttggaaaggg 930
             |||||||||||||||||||||
Sbjct: 42366 tggacttacagttggaaaggg 42346

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>gb|AC069282.6| Homo sapiens BAC clone RP11-61L9 from 7, complete sequence
          Length = 175938

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 629    gctcttaaattgatggaaaaa 649
              |||||||||||||||||||||
Sbjct: 125602 gctcttaaattgatggaaaaa 125582

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>gb|AC159283.2| Mus musculus BAC clone RP23-317B21 from chromosome 12, complete sequence
          Length = 245361

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 874    ggctcctgaaaatgactggaa 894
              |||||||||||||||||||||
Sbjct: 159976 ggctcctgaaaatgactggaa 159996

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>gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168615

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 454   ggatgatgacaaaaaagatta 474
             |||||||||||||||||||||
Sbjct: 88564 ggatgatgacaaaaaagatta 88584

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>gb|AC027239.5|AC027239 Homo sapiens chromosome 11, clone RP11-528L6, complete sequence
          Length = 196857

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 644    gaaaaagaaatatcaaacagagaaaaagaagga 676
              |||||||||| | |||||| |||||||||||||
Sbjct: 160503 gaaaaagaaaaaacaaacaaagaaaaagaagga 160471

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>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0460H04
          Length = 166490

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 143   ccgccgccgtccccgtctccgtccc 167
             ||||||||||||||||| |||||||
Sbjct: 53787 ccgccgccgtccccgtccccgtccc 53811

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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0709F06
          Length = 170964

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 143    ccgccgccgtccccgtctccgtccc 167
              ||||||||||||||||| |||||||
Sbjct: 132173 ccgccgccgtccccgtccccgtccc 132197

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>dbj|AP005777.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026F09
          Length = 124371

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 143   ccgccgccgtccccgtctccgtccc 167
             ||||||||||||||||| |||||||
Sbjct: 50162 ccgccgccgtccccgtccccgtccc 50138

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>dbj|AP005631.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OSJNBb0049K19
          Length = 131932

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 143  ccgccgccgtccccgtctccgtccc 167
            ||||||||||||||||| |||||||
Sbjct: 7117 ccgccgccgtccccgtccccgtccc 7093

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>dbj|AP006437.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-674C21, complete
              sequence
          Length = 171400

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 644    gaaaaagaaatatcaaacagagaaaaagaagga 676
              |||||||||| | |||||| |||||||||||||
Sbjct: 135064 gaaaaagaaaaaacaaacaaagaaaaagaagga 135032

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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 117     cggccaccgcctccacgtcgc 137
               |||||||||||||||||||||
Sbjct: 1853077 cggccaccgcctccacgtcgc 1853097

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>gb|AC145743.4| Mus musculus BAC clone RP24-171K11 from 3, complete sequence
          Length = 174136

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 73    ccctcccctccccacttcgctcccgccac 101
             |||||||||||||||||| ||||| ||||
Sbjct: 23997 ccctcccctccccacttccctccccccac 23969

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>gb|M77697.5| Caenorhabditis elegans cosmid B0303, complete sequence
          Length = 41073

 Score = 42.1 bits (21), Expect = 4.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 658  aaacagagaaaaagaaggaca 678
            |||||||||||||||||||||
Sbjct: 4552 aaacagagaaaaagaaggaca 4532


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 231,010,064
Number of extensions: 12769861
Number of successful extensions: 269479
Number of sequences better than 10.0: 54
Number of HSP's gapped: 269478
Number of HSP's successfully gapped: 71
Length of query: 1233
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1210
Effective length of database: 18,503,978,556
Effective search space: 22389814052760
Effective search space used: 22389814052760
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result