ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf87o05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120830:Os11g0112300 177 9e-45
2AK067455:Os12g0416500 112 3e-25
3AK102051:Os04g0111500 28 7.0
4AK072139:Os04g0111500 28 7.0
5AK072179:Os10g0329300 28 9.2
6AK070755:Os10g0329300 28 9.2
7AK060494:Os10g0329300 28 9.2

>AK120830:Os11g0112300 |
          Length = 136
 Score =  177 bits (448), Expect = 9e-45
 Identities = 89/122 (72%), Positives = 101/122 (82%)
 Frame = +3

Query: 114 RLESALLHIMXXXXXXXXXXXXXTERAKKDALRSAARVAGHLVEAVDGGVQELFVNEKRI 293
           +LE+ALLHIM             TER K DA++SAARVA  LV  VDGGVQEL++NE+RI
Sbjct: 15  QLEAALLHIMQRHHHQSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELYINERRI 74

Query: 294 ELEARALLGTIARYRKQSDQWLAATNAVNSVLKEIGDFENWMKIMDFDCKSINAAIRNIH 473
           E EARALL TIAR++KQ+DQWLAATNA+NSVLKEIGDFENWMKIMDFDCKSINAAIRNIH
Sbjct: 75  EFEARALLATIARFKKQTDQWLAATNAINSVLKEIGDFENWMKIMDFDCKSINAAIRNIH 134

Query: 474 RS 479
           +S
Sbjct: 135 QS 136



 Score = 38.5 bits (88), Expect = 0.005
 Identities = 19/27 (70%), Positives = 20/27 (74%)
 Frame = +1

Query: 538 IGDFLTENWMKIIGCDCKGINVAICNI 618
           IGDF  ENWMKI+  DCK IN AI NI
Sbjct: 109 IGDF--ENWMKIMDFDCKSINAAIRNI 133



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>AK067455:Os12g0416500 |
          Length = 102

 Score =  112 bits (280), Expect = 3e-25
 Identities = 61/89 (68%), Positives = 67/89 (75%)
 Frame = +3

Query: 114 RLESALLHIMXXXXXXXXXXXXXTERAKKDALRSAARVAGHLVEAVDGGVQELFVNEKRI 293
           +LE ALL IM             TERAK DA+RSAARVA  LV  VDGGVQEL++NEKRI
Sbjct: 6   QLEVALLQIMQRHHHESLRQRKQTERAKMDAVRSAARVADLLVATVDGGVQELYINEKRI 65

Query: 294 ELEARALLGTIARYRKQSDQWLAATNAVN 380
           ELEARALL TIA YRKQ+DQWLAATNA+N
Sbjct: 66  ELEARALLATIAWYRKQTDQWLAATNAIN 94



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>AK102051:Os04g0111500 |
          Length = 398

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 439 QSKSMIFIQFSKSPISLRTELTALVAASHWS 347
           Q+K   F QF+KSPI    E+    + S+WS
Sbjct: 76  QTKKDYFQQFAKSPIKKMLEIALSFSESNWS 106



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>AK072139:Os04g0111500 |
          Length = 522

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 439 QSKSMIFIQFSKSPISLRTELTALVAASHWS 347
           Q+K   F QF+KSPI    E+    + S+WS
Sbjct: 200 QTKKDYFQQFAKSPIKKMLEIALSFSESNWS 230



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>AK072179:Os10g0329300 |
          Length = 401

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 GHLVEAVDGGVQELFVNEKRIELEARALL-GTIARYRKQSDQWLAATNAVNSVLKEI 398
           G L         ++ + + R+    +AL+ G   R  + SD   +  NAVNS+ +E+
Sbjct: 226 GELTNLKSSNPVKMLITDTRVGRNTKALVAGVSERASRHSDAMASVFNAVNSISEEV 282



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>AK070755:Os10g0329300 |
          Length = 401

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 GHLVEAVDGGVQELFVNEKRIELEARALL-GTIARYRKQSDQWLAATNAVNSVLKEI 398
           G L         ++ + + R+    +AL+ G   R  + SD   +  NAVNS+ +E+
Sbjct: 226 GELTNLKSSNPVKMLITDTRVGRNTKALVAGVSERASRHSDAMASVFNAVNSISEEV 282



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>AK060494:Os10g0329300 |
          Length = 401

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 GHLVEAVDGGVQELFVNEKRIELEARALL-GTIARYRKQSDQWLAATNAVNSVLKEI 398
           G L         ++ + + R+    +AL+ G   R  + SD   +  NAVNS+ +E+
Sbjct: 226 GELTNLKSSNPVKMLITDTRVGRNTKALVAGVSERASRHSDAMASVFNAVNSISEEV 282


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,501,605
Number of extensions: 239643
Number of successful extensions: 639
Number of sequences better than 10.0: 7
Number of HSP's gapped: 639
Number of HSP's successfully gapped: 8
Length of query: 259
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 160
Effective length of database: 11,435,796
Effective search space: 1829727360
Effective search space used: 1829727360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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