ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf87k14 |
|---|---|
| Clone Library Name | barley_pub |
>Q9HC84:MUC5B_HUMAN Mucin-5B precursor - Homo sapiens (Human)| Length = 5703 Score = 34.7 bits (78), Expect = 0.90 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 10/52 (19%) Frame = +2 Query: 44 AGSTSPSLPGLA--CLVARSQIPTTC--------SSPPAFFPTTGAEKQASP 169 AGST P++PG+A L RS +P T S PP PTT A +A P Sbjct: 1679 AGSTEPTVPGVATSTLPTRSALPGTTGSLGTWRPSQPPTLAPTTMATSRARP 1730
>Q80Y39:CJ062_MOUSE Uncharacterized protein C10orf62 homolog - Mus musculus (Mouse)| Length = 304 Score = 34.3 bits (77), Expect = 1.2 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = -3 Query: 818 SASTGRGHQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHHVP 642 S S+ + H H +HQT G+ +H H H + QP HPS H++P Sbjct: 237 SYSSHQSHPGHSNHQGHSGLSSHQTHLGHSNHQGHPGHSSHQSHQGQPGHPSHQSHNLP 295
>Q2UBW0:HIR3_ASPOR Histone transcription regulator 3 homolog - Aspergillus oryzae| Length = 2059 Score = 34.3 bits (77), Expect = 1.2 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 12/106 (11%) Frame = +2 Query: 521 LEPQESTSVDAAA---AAFKNVGGGYDD-DGSETVKYYDEGKSLSVHDAEMMM------- 667 L+P+ S A+A A + G G +D D E DEG+++ V + E M+ Sbjct: 1917 LDPEVGMSAAASADGDGANEGAGDGEEDADREEDADLGDEGETM-VEEGETMVEEGDDGA 1975 Query: 668 -GDVAEFYAEDDGRGFVVFHDDDSQDKSGAPQDTSGSSKGRGSGAP 802 GD AE E +G G +D +D A ++ G G G P Sbjct: 1976 DGDEAEIDGEGEGEGEGEGEGEDEEDNEAAGEE---EGVGEGDGEP 2018
>Q24270:CAC1D_DROME Voltage-dependent calcium channel type D alpha-1 subunit -| Drosophila melanogaster (Fruit fly) Length = 2516 Score = 34.3 bits (77), Expect = 1.2 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 1/94 (1%) Frame = +2 Query: 503 PIETALLEPQES-TSVDAAAAAFKNVGGGYDDDGSETVKYYDEGKSLSVHDAEMMMGDVA 679 P E L+PQ S TS + ++F + GGG DD+ S + D S S + Sbjct: 221 PEEAWQLQPQNSVTSAGSTNSSFSS-GGGRDDNSSYSAVGGDSSSSNSCNCDITGDNSTL 279 Query: 680 EFYAEDDGRGFVVFHDDDSQDKSGAPQDTSGSSK 781 + D F+ DD+S+D G P + SS+ Sbjct: 280 HGFGVGDVCSFIADCDDNSEDDDGDPNNQDLSSQ 313
>Q51485:PORB_PSEAE Porin B precursor - Pseudomonas aeruginosa| Length = 454 Score = 32.3 bits (72), Expect = 4.5 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 10/114 (8%) Frame = +2 Query: 512 TALLEPQESTSVDAAAAAFKNVGGGYDDDGSETVKYYDEGKSLSVH-DAEMMMG-DVAEF 685 T LLE ++ A N+ GGYDDD +T +Y D+ +L VH D E ++G EF Sbjct: 51 TELLEKGYDFKLEYVGEAAANLDGGYDDD--KTGRYTDQ-FALGVHMDLEKILGWKATEF 107 Query: 686 ---YAEDDGRGFVVFHDDDSQDKSGAPQDTSGSSK----GRG-SGAPCQCWLKK 823 E +G+ S D+ G P+ SS GRG + Q WLK+ Sbjct: 108 QFTVTERNGKNL-------SNDRIGDPRAGHISSVQEVWGRGQTWRLTQLWLKQ 154
>Q6ZMT1:STAC2_HUMAN SH3 and cysteine-rich domain-containing protein 2 - Homo sapiens| (Human) Length = 411 Score = 32.0 bits (71), Expect = 5.8 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%) Frame = -3 Query: 767 WCPE--AHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHHVPTG 636 WC E +HQ CPG +RN LL P ++S+ PTG Sbjct: 151 WCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTG 196
>P16912:KDC2_DROME Protein kinase DC2 - Drosophila melanogaster (Fruit fly)| Length = 583 Score = 32.0 bits (71), Expect = 5.9 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Frame = +2 Query: 455 LMSDHFVFPPSEHENLPIETALLEPQESTSVDAAAAAFKNVGGGYDDDGSETVKYYDEGK 634 L SD+ P + + P +P ++ + A +D+D E + DE + Sbjct: 165 LESDYSEEDPEQEQQRP------DPATNSRSSSTATTTTTSSADHDNDVDEEDEEDDENE 218 Query: 635 SL-SVHDAEMMMGDVAEFYAEDDGRGFVVFHDDDSQDKSGAPQDTSGSSK 781 + DA+ D +E EDDG DDD ++S + Q G K Sbjct: 219 GEGNGRDADDATHDSSESIEEDDGNETDDEEDDDESEESSSVQTAKGVRK 268
>Q9DBX6:CP2S1_MOUSE Cytochrome P450 2S1 - Mus musculus (Mouse)| Length = 501 Score = 32.0 bits (71), Expect = 5.9 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = -1 Query: 1186 GISQAWQQANTLSNLILLQLETPFVTVANHIGTAIFFLVIMTPG*SVKTHQRLYQRRTPQ 1007 GIS W QA + + +L L P + +H+GT F + V+ HQ +Q P Sbjct: 212 GISSPWGQAYEMFSWLLQPLPGPHTQLQHHLGTLAAFTIQ-----QVQKHQGRFQTSGPA 266 Query: 1006 TD 1001 D Sbjct: 267 RD 268
>Q664P8:TAUB_YERPS Taurine import ATP-binding protein tauB - Yersinia| pseudotuberculosis Length = 255 Score = 31.6 bits (70), Expect = 7.6 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -2 Query: 222 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 100 G S+ QRR+TAL ++ GLA F + + +GG Q VGI Sbjct: 99 GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139
>Q1CCR9:TAUB_YERPN Taurine import ATP-binding protein tauB - Yersinia pestis (biovar| Antiqua strain Nepal516) Length = 255 Score = 31.6 bits (70), Expect = 7.6 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -2 Query: 222 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 100 G S+ QRR+TAL ++ GLA F + + +GG Q VGI Sbjct: 99 GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139
>Q8ZJD0:TAUB_YERPE Taurine import ATP-binding protein tauB - Yersinia pestis| Length = 255 Score = 31.6 bits (70), Expect = 7.6 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -2 Query: 222 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 100 G S+ QRR+TAL ++ GLA F + + +GG Q VGI Sbjct: 99 GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139
>Q1C2S1:TAUB_YERPA Taurine import ATP-binding protein tauB - Yersinia pestis (biovar| Antiqua strain Antiqua) Length = 255 Score = 31.6 bits (70), Expect = 7.6 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = -2 Query: 222 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 100 G S+ QRR+TAL ++ GLA F + + +GG Q VGI Sbjct: 99 GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139
>Q91513:PRLR_ORENI Prolactin receptor precursor - Oreochromis niloticus (Nile tilapia)| (Tilapia nilotica) Length = 630 Score = 31.6 bits (70), Expect = 7.6 Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 15/138 (10%) Frame = +2 Query: 467 HFVFPPSEHENLP-IETALLEPQESTSVDAAAAA--FKNVGGGYDDDGSETVKYY-DEGK 634 H + PP + + LL+ +S V +A F Y+D E ++ Y E + Sbjct: 265 HCMLPPVPGPKIKGFDKQLLKSGKSDEVFSALVVSDFPPTTSNYEDLLVEYLEVYMPEQQ 324 Query: 635 SLSVH---DAEMMMGDVAEFYAEDDGRGFVVFHDDDS--QDKSGAP------QDTSGSSK 781 L V D + + + D GRG D D+ DKSGAP Q+ G Sbjct: 325 ELMVDKGKDHDGCLKSIGSASDSDSGRGSC---DSDNLLMDKSGAPKEEQQQQNQEGDQI 381 Query: 782 GRGSGAPCQCWLKKHMSC 835 G+ + P + W K+ M C Sbjct: 382 GKETQGPKEAWEKEAMPC 399
>Q8R1B0:STAC2_MOUSE SH3 and cysteine-rich domain-containing protein 2 - Mus musculus| (Mouse) Length = 408 Score = 31.2 bits (69), Expect = 10.0 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -3 Query: 767 WCPE--AHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHHVPTGS 633 WC E +HQ CPG +RN LL P + ++ PTG+ Sbjct: 151 WCSEEISHQQCPGKTSTSFRRNFSSPLLVHAPPPACAMNKESPPTGT 197
>Q8JSP8:SPIKE_CVPIA Spike glycoprotein precursor - Porcine hemagglutinating| encephalomyelitis virus (strain IAF-404) (HEV) Length = 1349 Score = 31.2 bits (69), Expect = 10.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 420 SERAAKTAREHCSCRTTSCSPPASTRTCP 506 S++ T +C CRT+ C A T TCP Sbjct: 470 SQQCFNTPNTYCPCRTSQCIGGAGTGTCP 498
>Q8BB25:SPIKE_CVP67 Spike glycoprotein precursor - Porcine hemagglutinating| encephalomyelitis virus (strain 67N) (HEV-67N) Length = 1349 Score = 31.2 bits (69), Expect = 10.0 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 420 SERAAKTAREHCSCRTTSCSPPASTRTCP 506 S++ T +C CRT+ C A T TCP Sbjct: 470 SQQCFNTPNTYCPCRTSQCIGGAGTGTCP 498
>Q91V93:RHBT2_MOUSE Rho-related BTB domain-containing protein 2 - Mus musculus (Mouse)| Length = 728 Score = 31.2 bits (69), Expect = 10.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 761 PEAHQTCPGNHHHGKQRNHGRHLLRR 684 PE H++ P HHH +HGR L R Sbjct: 316 PEDHRSHPEQHHHHHHHHHGRDFLLR 341
>Q9NBW1:FRIZ4_DROME Frizzled-4 precursor - Drosophila melanogaster (Fruit fly)| Length = 705 Score = 31.2 bits (69), Expect = 10.0 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Frame = -3 Query: 857 SP*LGHTGMTCASSASTGRG--HQSRGPCCCHWCPEAHQTCPGNHHHGKQRNHGRHLLRR 684 SP G + S+ S GR HQ R P +HHH +Q++H H Sbjct: 617 SPGTGSISLNQMSNYSLGRSVHHQQRHS-------------PHHHHHQQQQHHQFHPHHN 663 Query: 683 TQPRHPSSSRHHVPTGS 633 Q SS R + P GS Sbjct: 664 HQHHSTSSHRLYYPPGS 680
>Q8K1L0:CREB5_MOUSE cAMP response element-binding protein 5 - Mus musculus (Mouse)| Length = 357 Score = 31.2 bits (69), Expect = 10.0 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -3 Query: 770 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 648 H P HQT P +H + Q H H QP H + HH Sbjct: 124 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 163
>Q02930:CREB5_HUMAN cAMP response element-binding protein 5 - Homo sapiens (Human)| Length = 508 Score = 31.2 bits (69), Expect = 10.0 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = -3 Query: 770 HWCPEAHQTCPGNHHHGKQRNHGRHLLRRTQPRHPSSSRHH 648 H P HQT P +H + Q H H QP H + HH Sbjct: 275 HSHPHQHQTLPPHHPYPHQHQHPAH-HPHPQPHHQQNHPHH 314
>Q28256:GP1BA_CANFA Platelet glycoprotein Ib alpha chain precursor - Canis familiaris| (Dog) Length = 677 Score = 31.2 bits (69), Expect = 10.0 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +2 Query: 5 PKTPRRFLIWTSEAGSTSPSLPGLACLVARSQIPTTCSSPPAFFPTTGAEKQASPQIPTT 184 P TP+ T+ +T+P+ P ++PT ++P P T E +P PTT Sbjct: 441 PTTPQPATTPTTPQPATTPTTPQPTTTPTIPELPTPPTTPEPTMPPTTLEPTTTPTSPTT 500 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 218,577,957 Number of extensions: 4580910 Number of successful extensions: 14400 Number of sequences better than 10.0: 21 Number of HSP's gapped: 14348 Number of HSP's successfully gapped: 21 Length of query: 435 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 319 Effective length of database: 68,868,219 Effective search space: 21968961861 Effective search space used: 21968961861 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
