ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf89i19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0523000:Os04g0523000 148 4e-36
2Os02g0578400:Os02g0578400 39 0.005
3AK068377:Os07g0105600 35 0.051
4Os11g0258500:Os11g0258500 31 0.96
5AK062402:Os01g0860700 30 2.1
6Os07g0112100:Os07g0112100 29 3.6
7AK109809:Os05g0157000 29 3.6

>Os04g0523000:Os04g0523000 |
          Length = 183
 Score =  148 bits (374), Expect = 4e-36
 Identities = 77/97 (79%), Positives = 84/97 (86%), Gaps = 1/97 (1%)
 Frame = +2

Query: 233 LLPPTA-GIAGAFDLDLRITIPEQSSEEAEAVVRTHARNLVRVKQYIDARSWRELQTALR 409
           LLP  A  +AGAF+ DLRIT+PEQS EEAEAVV+ HARNLVRVK  IDARSWRELQ ALR
Sbjct: 56  LLPAAATSVAGAFEFDLRITVPEQSGEEAEAVVKLHARNLVRVKGLIDARSWRELQAALR 115

Query: 410 ASAANLKQDLYAIIQARPPGQRPELRRLYSDLFNNVT 520
           +SAANLKQDLYAIIQA P  +RPELRRLYSDLFN+VT
Sbjct: 116 SSAANLKQDLYAIIQASPASRRPELRRLYSDLFNSVT 152



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>Os02g0578400:Os02g0578400 |
          Length = 225

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 23/104 (22%), Positives = 48/104 (46%)
 Frame = +2

Query: 293 PEQSSEEAEAVVRTHARNLVRVKQYIDARSWRELQTALRASAANLKQDLYAIIQARPPGQ 472
           P  ++EEA A +R  A  +  ++  ++  SW+ +   +R  +  L  DL   +   P  +
Sbjct: 117 PGLTAEEAAARIRQTAEGMRTLRPMLETMSWKYVLFYVRLKSKYLDLDLTTAMFGVPEAR 176

Query: 473 RPELRRLYSDLFNNVTRLDYAARDKDELQVQECYGNIVAAIDQI 604
           R +  R+ ++L +N+T  D   R     +    Y   + ++D +
Sbjct: 177 RADYVRVANELVDNMTEFDRFVRTPKVYESYLYYEKTLKSLDDV 220



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>AK068377:Os07g0105600 |
          Length = 222

 Score = 35.4 bits (80), Expect = 0.051
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +2

Query: 404 LRASAANLKQDLYAIIQARPPGQRPELRRLYSDLFNNVTRLDYAARDKDELQVQECYGNI 583
           LR  +  +  D   +I A    QRP L  L + LF++  RL  A   KD+ Q+   Y + 
Sbjct: 151 LRLKSTFMYFDFDKLISAASDDQRPPLLDLATRLFDSFERLQKACGTKDDTQIGSSYADT 210

Query: 584 VAAIDQIFARI 616
              + ++ A++
Sbjct: 211 KIILQEVMAKM 221



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>Os11g0258500:Os11g0258500 |
          Length = 951

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 10/31 (32%), Positives = 24/31 (77%)
 Frame = +2

Query: 470 QRPELRRLYSDLFNNVTRLDYAARDKDELQV 562
           Q+P++R+++  + N++TR+++A+   DE Q+
Sbjct: 228 QKPDMRKIFQKMLNDITRIEHASLAWDEEQL 258



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>AK062402:Os01g0860700 |
          Length = 87

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = -1

Query: 262 ACDARRRRQQLGREESRADRGRGHRK 185
           AC  RRRR+Q G E  R  R R HR+
Sbjct: 37  ACVGRRRRRQRGAEPRRGRRRRRHRR 62



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>Os07g0112100:Os07g0112100 |
          Length = 510

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 39  WHCSSPSNHSPQASPALLTNPPKSPRAMAT 128
           WHCSSP+ H    + +     P  PR   T
Sbjct: 472 WHCSSPARHQASLAVSAADGHPPPPRLAQT 501



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>AK109809:Os05g0157000 |
          Length = 346

 Score = 29.3 bits (64), Expect = 3.6
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -1

Query: 457 RLDDGV---QVLLEVGGAGPQRRLKLPPRPGVDVLLDAHQVPR 338
           R+ DGV   + L+ +G  GPQR  +L  RPG+DVLL    VPR
Sbjct: 31  RVADGVPDHRRLVRLGALGPQRP-RLLRRPGLDVLLGV--VPR 70


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 22,766,069
Number of extensions: 501214
Number of successful extensions: 2411
Number of sequences better than 10.0: 7
Number of HSP's gapped: 2404
Number of HSP's successfully gapped: 7
Length of query: 285
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 185
Effective length of database: 11,395,755
Effective search space: 2108214675
Effective search space used: 2108214675
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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