ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89f20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070447:Os06g0101600 | 196 | 1e-50 | 2 | AF093636:Os06g0101600 | 196 | 1e-50 | 3 | AF009412: | 189 | 2e-48 | 4 | Os01g0228200:Os01g0228200 | 31 | 0.95 | 5 | AK100676:Os01g0180800 | 28 | 8.1 | 6 | AK061691:Os01g0180800 | 28 | 8.1 |
|---|
>AK070447:Os06g0101600 | Length = 154 Score = 196 bits (498), Expect = 1e-50 Identities = 93/97 (95%), Positives = 97/97 (100%) Frame = +2 Query: 260 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 439 Q+VLLGANGGVLVFEPNDF+VK+GETITFKNNAG+PHNVVFDEDAVPSGVDVSKISQEEY Sbjct: 58 QEVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQEEY 117 Query: 440 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 550 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN Sbjct: 118 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154
>AF093636:Os06g0101600 | Length = 154 Score = 196 bits (498), Expect = 1e-50 Identities = 93/97 (95%), Positives = 97/97 (100%) Frame = +2 Query: 260 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 439 Q+VLLGANGGVLVFEPNDF+VK+GETITFKNNAG+PHNVVFDEDAVPSGVDVSKISQEEY Sbjct: 58 QEVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQEEY 117 Query: 440 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 550 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN Sbjct: 118 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154
>AF009412: | Length = 154 Score = 189 bits (479), Expect = 2e-48 Identities = 89/97 (91%), Positives = 96/97 (98%) Frame = +2 Query: 260 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 439 Q+VLLGANGGVLVFEPNDF+VK+GETITFKNNAG+PHNVVFD+DAVPSGV++SKISQEEY Sbjct: 58 QEVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDKDAVPSGVNLSKISQEEY 117 Query: 440 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 550 LNAPGETFSVTLTVPGTY FYCEPHAGAGMVGKVTVN Sbjct: 118 LNAPGETFSVTLTVPGTYXFYCEPHAGAGMVGKVTVN 154
>Os01g0228200:Os01g0228200 | Length = 1135 Score = 30.8 bits (68), Expect = 0.95 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = +2 Query: 365 PHNVVFDEDAVPSGVDVSKISQEEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVT 544 P NV+FDE+ D L +T +T ++PGT+G+ + G +GK + Sbjct: 978 PSNVLFDEEMTAHVADFGIAK----LLLGDDTSKITASMPGTFGYMAPEY---GSLGKAS 1030 Query: 545 VN**SYQFG 571 N + FG Sbjct: 1031 RNSDVFSFG 1039
>AK100676:Os01g0180800 | Length = 845 Score = 27.7 bits (60), Expect = 8.1 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -1 Query: 534 PTMPAPAWGSQ*KP*VPGTVRVTEKVSPGALRYSSWEILETSTPEGTASS 385 P PA G+Q P + S G S+ E +ET PEGT ++ Sbjct: 796 PPTETPAGGAQTPEQQPQGAEAAGEASEGGASESTGEQMETDKPEGTEAA 845
>AK061691:Os01g0180800 | Length = 273 Score = 27.7 bits (60), Expect = 8.1 Identities = 16/50 (32%), Positives = 22/50 (44%) Frame = -1 Query: 534 PTMPAPAWGSQ*KP*VPGTVRVTEKVSPGALRYSSWEILETSTPEGTASS 385 P PA G+Q P + S G S+ E +ET PEGT ++ Sbjct: 224 PPTETPAGGAQTPEQQPQGAEAAGEASEGGASESTGEQMETDKPEGTEAA 273 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,405,408 Number of extensions: 246000 Number of successful extensions: 761 Number of sequences better than 10.0: 6 Number of HSP's gapped: 760 Number of HSP's successfully gapped: 6 Length of query: 238 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 140 Effective length of database: 11,475,837 Effective search space: 1606617180 Effective search space used: 1606617180 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
