ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9f21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001055523.1| Oryza sativa (japonica cultivar-group) Os03g0151900 (Os03g0151900) mRNA, complete cds Length = 1008 Score = 718 bits (362), Expect = 0.0 Identities = 552/614 (89%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccagctagaagcactggagggctgaacaata 250 ||||||| ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 171 cgccggcgatgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaata 230 Query: 251 t---caacggtagctcttccgccaccgattcaaacgacttgcgtgccaagttggtattgc 307 | ||||| || ||| ||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 231 ttagcaacgataactc---cgctactgattcaaaggacttgcgtgctaagttggtattgc 287 Query: 308 tcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcg 367 | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 288 ttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttg 347 Query: 368 atccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggagg 427 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 348 atcccacttccaaggtaactgtcggtgcatcatttttatcacaaacattggctttggagg 407 Query: 428 attcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgcct 487 | || ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| Sbjct: 408 actcaacaatagtgaaatttgaaatatgggataccgctggacaagagaggtatgctgcct 467 Query: 488 tggcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagcc 547 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 468 tggcacctctttactacagaggagctgctgctgcagttgttgtctacgacataactagtc 527 Query: 548 cagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctg 607 |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 528 cagaatcatttagcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctg 587 Query: 608 gtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaagcgtacctt 667 |||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 588 atattatcatggttttggttggtaataaagctgatctacatgaaaatcgacatgtatctt 647 Query: 668 ctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaa 727 ||||||| ||||||||||||||||||||||| | |||| | ||||| ||||| ||||||| Sbjct: 648 ctcaggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaa 707 Query: 728 aaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgcccaagccaa 787 | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 708 agacagctgataatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaa 767 Query: 788 caacgtcttgataa 801 | ||||||||||| Sbjct: 768 cggcgtcttgataa 781
>gb|AF323991.1|AF323991 Oryza sativa small GTP-binding protein RAB5B (rab5B) gene, complete cds Length = 1016 Score = 718 bits (362), Expect = 0.0 Identities = 552/614 (89%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccagctagaagcactggagggctgaacaata 250 ||||||| ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 159 cgccggcgatgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaata 218 Query: 251 t---caacggtagctcttccgccaccgattcaaacgacttgcgtgccaagttggtattgc 307 | ||||| || ||| ||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 219 ttagcaacgataactc---cgctactgattcaaaggacttgcgtgctaagttggtattgc 275 Query: 308 tcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcg 367 | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 276 ttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttg 335 Query: 368 atccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggagg 427 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 336 atcccacttccaaggtaactgtcggtgcatcatttttatcacaaacattggctttggagg 395 Query: 428 attcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgcct 487 | || ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| Sbjct: 396 actcaacaatagtgaaatttgaaatatgggataccgctggacaagagaggtatgctgcct 455 Query: 488 tggcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagcc 547 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 456 tggcacctctttactacagaggagctgctgctgcagttgttgtctacgacataactagtc 515 Query: 548 cagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctg 607 |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 516 cagaatcatttagcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctg 575 Query: 608 gtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaagcgtacctt 667 |||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 576 atattatcatggttttggttggtaataaagctgatctacatgaaaatcgacatgtatctt 635 Query: 668 ctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaa 727 ||||||| ||||||||||||||||||||||| | |||| | ||||| ||||| ||||||| Sbjct: 636 ctcaggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaa 695 Query: 728 aaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgcccaagccaa 787 | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 696 agacagctgataatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaa 755 Query: 788 caacgtcttgataa 801 | ||||||||||| Sbjct: 756 cggcgtcttgataa 769
>dbj|AK121527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030F24, full insert sequence Length = 1009 Score = 718 bits (362), Expect = 0.0 Identities = 552/614 (89%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccagctagaagcactggagggctgaacaata 250 ||||||| ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 172 cgccggcgatgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaata 231 Query: 251 t---caacggtagctcttccgccaccgattcaaacgacttgcgtgccaagttggtattgc 307 | ||||| || ||| ||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 232 ttagcaacgataactc---cgctactgattcaaaggacttgcgtgctaagttggtattgc 288 Query: 308 tcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcg 367 | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 289 ttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttg 348 Query: 368 atccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggagg 427 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 349 atcccacttccaaggtaactgtcggtgcatcatttttatcacaaacattggctttggagg 408 Query: 428 attcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgcct 487 | || ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| Sbjct: 409 actcaacaatagtgaaatttgaaatatgggataccgctggacaagagaggtatgctgcct 468 Query: 488 tggcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagcc 547 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 469 tggcacctctttactacagaggagctgctgctgcagttgttgtctacgacataactagtc 528 Query: 548 cagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctg 607 |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 529 cagaatcatttagcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctg 588 Query: 608 gtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaagcgtacctt 667 |||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 589 atattatcatggttttggttggtaataaagctgatctacatgaaaatcgacatgtatctt 648 Query: 668 ctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaa 727 ||||||| ||||||||||||||||||||||| | |||| | ||||| ||||| ||||||| Sbjct: 649 ctcaggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaa 708 Query: 728 aaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgcccaagccaa 787 | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 709 agacagctgataatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaa 768 Query: 788 caacgtcttgataa 801 | ||||||||||| Sbjct: 769 cggcgtcttgataa 782
>dbj|AK105389.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A01, full insert sequence Length = 1008 Score = 718 bits (362), Expect = 0.0 Identities = 552/614 (89%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccagctagaagcactggagggctgaacaata 250 ||||||| ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 154 cgccggcgatgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaata 213 Query: 251 t---caacggtagctcttccgccaccgattcaaacgacttgcgtgccaagttggtattgc 307 | ||||| || ||| ||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 214 ttagcaacgataactc---cgctactgattcaaaggacttgcgtgctaagttggtattgc 270 Query: 308 tcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcg 367 | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 271 ttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttg 330 Query: 368 atccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggagg 427 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 331 atcccacttccaaggtaactgtcggtgcatcatttttatcacaaacattggctttggagg 390 Query: 428 attcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgcct 487 | || ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| Sbjct: 391 actcaacaatagtgaaatttgaaatatgggataccgctggacaagagaggtatgctgcct 450 Query: 488 tggcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagcc 547 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 451 tggcacctctttactacagaggagctgctgctgcagttgttgtctacgacataactagtc 510 Query: 548 cagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctg 607 |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 511 cagaatcatttagcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctg 570 Query: 608 gtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaagcgtacctt 667 |||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 571 atattatcatggttttggttggtaataaagctgatctacatgaaaatcgacatgtatctt 630 Query: 668 ctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaa 727 ||||||| ||||||||||||||||||||||| | |||| | ||||| ||||| ||||||| Sbjct: 631 ctcaggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaa 690 Query: 728 aaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgcccaagccaa 787 | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 691 agacagctgataatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaa 750 Query: 788 caacgtcttgataa 801 | ||||||||||| Sbjct: 751 cggcgtcttgataa 764
>dbj|AB032761.1| Oryza sativa (japonica cultivar-group) rab5B mRNA, complete cds Length = 974 Score = 710 bits (358), Expect = 0.0 Identities = 551/614 (89%), Gaps = 6/614 (0%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccagctagaagcactggagggctgaacaata 250 ||||||| ||||| ||||||||||||| ||||||| |||||||||||||| ||||||||| Sbjct: 105 cgccggcgatgggttgctcctcctccgtgccagctcgaagcactggagggttgaacaata 164 Query: 251 t---caacggtagctcttccgccaccgattcaaacgacttgcgtgccaagttggtattgc 307 | ||||| || ||| ||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 165 ttagcaacgataactc---cgctactgattcaaaggacttgcgtgctaagttggtattgc 221 Query: 308 tcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcg 367 | || ||||||||||| || ||||| ||||| ||||||||||||||||| |||||||| | Sbjct: 222 ttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttcgtggtcagtttg 281 Query: 368 atccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggagg 427 |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 282 atcccacttccaaggtaactgtcggtgcatcatttttatcacaaacattggctttggagg 341 Query: 428 attcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgcct 487 | || ||||||||||| |||||||| |||||||| |||||||||||||| |||||||||| Sbjct: 342 actcaacaatagtgaaatttgaaatatgggataccgctggacaagagaggtatgctgcct 401 Query: 488 tggcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagcc 547 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | Sbjct: 402 tggcacctctttactacagaggagctgctgctgcagttgttgtctacgacataactagtc 461 Query: 548 cagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctg 607 |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 462 cagaatcatttagcaaagcacaatactgggtgaaggaacttcaaaaacatggtagtcctg 521 Query: 608 gtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaagcgtacctt 667 |||| ||||||||||||||||||||||||||||||||||| ||| |||| ||| ||| Sbjct: 522 atattatcatggttttggttggtaataaagctgatctacataaaaatcgacatgtatctt 581 Query: 668 ctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaa 727 ||||||| ||||||||||||||||||||||| | |||| | ||||| ||||| ||||||| Sbjct: 582 ctcaggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaa 641 Query: 728 aaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgcccaagccaa 787 | ||| ||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 642 agacagctgataatataaaccaagtatttgaggaaattgcgaagaggttgcccaggccaa 701 Query: 788 caacgtcttgataa 801 | ||||||||||| Sbjct: 702 cggcgtcttgataa 715
>ref|NM_001071227.1| Oryza sativa (japonica cultivar-group) Os10g0441800 (Os10g0441800) mRNA, complete cds Length = 1109 Score = 458 bits (231), Expect = e-125 Identities = 429/495 (86%) Strand = Plus / Plus Query: 295 aagttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgtt 354 |||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 278 aagttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtc 337 Query: 355 cgcggtcagttcgatccaacttccaaggtaactgttggtgcatcatttttatcacaaaca 414 || |||||||| || || ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 338 cgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttgtcacaaaca 397 Query: 415 ttggcgttggaggattcgacaatagtgaagtttgaaatctgggatactgctggacaagag 474 ||||||||||||||||| |||| ||| ||||||||||| |||||||||||||| || ||| Sbjct: 398 ttggcgttggaggattccacaacagtaaagtttgaaatatgggatactgctggtcaggag 457 Query: 475 agatatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctat 534 || |||||||| |||||||||||||||||| | ||||||| ||| || ||||||| ||| Sbjct: 458 aggtatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtat 517 Query: 535 gacataactagcccagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaa 594 |||||||| || ||||||||||||| || |||||||| ||||||||||||||||| ||| Sbjct: 518 gacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaacttcagaaa 577 Query: 595 catggtaatcctggtattgtcatggttttggttggtaataaagctgatctacatgaaagt 654 || |||| ||| | ||| |||||| ||||||||| ||||| |||||||||||||| | | Sbjct: 578 cacggtagtccagatatgatcatggctttggttggaaataaggctgatctacatgacaat 637 Query: 655 cgaagcgtaccttctcaggaggcacaagagtatgcagagaagaacagtatgttattcatg 714 || || ||| | |||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct: 638 cgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatgtttttcatc 697 Query: 715 gagacgtcagcaaaaacatctgataatataaatcaagtatttgaggaaatcgcgaagagg 774 ||||| ||||| ||||| ||||||| ||||| ||| |||| |||||||| ||||||||| Sbjct: 698 gagacatcagcgaaaacggctgataacataaaccaactattcgaggaaattgcgaagagg 757 Query: 775 ttgcccaagccaaca 789 ||||||| ||||||| Sbjct: 758 ttgcccaggccaaca 772
>dbj|AK070200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042B11, full insert sequence Length = 1110 Score = 458 bits (231), Expect = e-125 Identities = 429/495 (86%) Strand = Plus / Plus Query: 295 aagttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgtt 354 |||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 279 aagttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtc 338 Query: 355 cgcggtcagttcgatccaacttccaaggtaactgttggtgcatcatttttatcacaaaca 414 || |||||||| || || ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 339 cgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttgtcacaaaca 398 Query: 415 ttggcgttggaggattcgacaatagtgaagtttgaaatctgggatactgctggacaagag 474 ||||||||||||||||| |||| ||| ||||||||||| |||||||||||||| || ||| Sbjct: 399 ttggcgttggaggattccacaacagtaaagtttgaaatatgggatactgctggtcaggag 458 Query: 475 agatatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctat 534 || |||||||| |||||||||||||||||| | ||||||| ||| || ||||||| ||| Sbjct: 459 aggtatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtat 518 Query: 535 gacataactagcccagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaa 594 |||||||| || ||||||||||||| || |||||||| ||||||||||||||||| ||| Sbjct: 519 gacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaacttcagaaa 578 Query: 595 catggtaatcctggtattgtcatggttttggttggtaataaagctgatctacatgaaagt 654 || |||| ||| | ||| |||||| ||||||||| ||||| |||||||||||||| | | Sbjct: 579 cacggtagtccagatatgatcatggctttggttggaaataaggctgatctacatgacaat 638 Query: 655 cgaagcgtaccttctcaggaggcacaagagtatgcagagaagaacagtatgttattcatg 714 || || ||| | |||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct: 639 cgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatgtttttcatc 698 Query: 715 gagacgtcagcaaaaacatctgataatataaatcaagtatttgaggaaatcgcgaagagg 774 ||||| ||||| ||||| ||||||| ||||| ||| |||| |||||||| ||||||||| Sbjct: 699 gagacatcagcgaaaacggctgataacataaaccaactattcgaggaaattgcgaagagg 758 Query: 775 ttgcccaagccaaca 789 ||||||| ||||||| Sbjct: 759 ttgcccaggccaaca 773
>dbj|AK060324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H06, full insert sequence Length = 1097 Score = 458 bits (231), Expect = e-125 Identities = 429/495 (86%) Strand = Plus / Plus Query: 295 aagttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgtt 354 |||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct: 287 aagttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtc 346 Query: 355 cgcggtcagttcgatccaacttccaaggtaactgttggtgcatcatttttatcacaaaca 414 || |||||||| || || ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 347 cgtggtcagtttgaccccacttcaaaggtgactgttggtgcatcatttttgtcacaaaca 406 Query: 415 ttggcgttggaggattcgacaatagtgaagtttgaaatctgggatactgctggacaagag 474 ||||||||||||||||| |||| ||| ||||||||||| |||||||||||||| || ||| Sbjct: 407 ttggcgttggaggattccacaacagtaaagtttgaaatatgggatactgctggtcaggag 466 Query: 475 agatatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctat 534 || |||||||| |||||||||||||||||| | ||||||| ||| || ||||||| ||| Sbjct: 467 aggtatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtat 526 Query: 535 gacataactagcccagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaa 594 |||||||| || ||||||||||||| || |||||||| ||||||||||||||||| ||| Sbjct: 527 gacataacaagttcagaatcatttaacaaggcacaatactgggtgaaggaacttcagaaa 586 Query: 595 catggtaatcctggtattgtcatggttttggttggtaataaagctgatctacatgaaagt 654 || |||| ||| | ||| |||||| ||||||||| ||||| |||||||||||||| | | Sbjct: 587 cacggtagtccagatatgatcatggctttggttggaaataaggctgatctacatgacaat 646 Query: 655 cgaagcgtaccttctcaggaggcacaagagtatgcagagaagaacagtatgttattcatg 714 || || ||| | |||||||| ||||||||||||||||||| ||||| |||||| ||||| Sbjct: 647 cgtagtgtatcctctcaggatgcacaagagtatgcagagaggaacactatgtttttcatc 706 Query: 715 gagacgtcagcaaaaacatctgataatataaatcaagtatttgaggaaatcgcgaagagg 774 ||||| ||||| ||||| ||||||| ||||| ||| |||| |||||||| ||||||||| Sbjct: 707 gagacatcagcgaaaacggctgataacataaaccaactattcgaggaaattgcgaagagg 766 Query: 775 ttgcccaagccaaca 789 ||||||| ||||||| Sbjct: 767 ttgcccaggccaaca 781
>gb|AY110650.1| Zea mays CL35311_1 mRNA sequence Length = 702 Score = 383 bits (193), Expect = e-103 Identities = 368/430 (85%) Strand = Plus / Minus Query: 359 gtcagttcgatccaacttccaaggtaactgttggtgcatcatttttatcacaaacattgg 418 ||||||| ||||| |||||||||||||| | ||| ||||| |||||||||||||| Sbjct: 577 gtcagtttgatcctacttccaaggtaacagatggcgcatcnnnnnnatcacaaacattgg 518 Query: 419 cgttggaggattcgacaatagtgaagtttgaaatctgggatactgctggacaagagagat 478 | ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| | Sbjct: 517 cattggaggattcaacaatagtgaagtttgaaatttgggatactgctgggcaagagaggt 458 Query: 479 atgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgaca 538 ||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| | Sbjct: 457 atgctgccttggcgccactttactacagaggagctgctgctgcatttgttgtctatgata 398 Query: 539 taactagcccagaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatg 598 |||| || || |||||||||| |||||||| |||||||| ||||||||||| || |||| Sbjct: 397 taacaagtccggaatcatttagcaaagcacagtattgggtaaaggaacttcagaagcatg 338 Query: 599 gtaatcctggtattgtcatggttttggttggtaataaagctgatctacatgaaagtcgaa 658 ||| |||||||||||| |||||||||||||||||||| |||||||||||||| | ||||| Sbjct: 337 gtagtcctggtattgtaatggttttggttggtaataaggctgatctacatgataatcgaa 278 Query: 659 gcgtaccttctcaggaggcacaagagtatgcagagaagaacagtatgttattcatggaga 718 | ||| | || ||||| || || || || ||||||||||||| |||| ||| |||| Sbjct: 277 gtgtatcctcgcaggatgcgcaggactacgcagagaagaacaatatgnnnnncattgaga 218 Query: 719 cgtcagcaaaaacatctgataatataaatcaagtatttgaggaaatcgcgaagaggttgc 778 |||| || || ||| ||||||||||||| ||| | ||||||||||| || |||||||||| Sbjct: 217 cgtcggccaagacagctgataatataaaccaactgtttgaggaaattgcaaagaggttgc 158 Query: 779 ccaagccaac 788 | | |||||| Sbjct: 157 ctaggccaac 148 Score = 73.8 bits (37), Expect = 1e-09 Identities = 52/57 (91%) Strand = Plus / Minus Query: 276 ttcaaacgacttgcgtgccaagttggtattgctcggagactctggtgttggaaaaag 332 |||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||| Sbjct: 660 ttcaaaggacttgcgtgctaagttggtattgctgggagactcaggtgttgggaaaag 604
>emb|Z73939.1|LJRAB5B L.japonicus mRNA for small GTP-binding protein, RAB5B Length = 1210 Score = 186 bits (94), Expect = 1e-43 Identities = 268/326 (82%) Strand = Plus / Plus Query: 319 ggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcgatccaacttcc 378 |||||||| |||||||| || ||||| || |||||||| |||||||| |||||||| ||| Sbjct: 320 ggtgttggtaaaagctgtattgttctgcgatttgttcgtggtcagtttgatccaacatcc 379 Query: 379 aaggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaata 438 |||||||||||||| || || ||||| || |||||| | || || | || || |||| | Sbjct: 380 aaggtaactgttggagcttcttttttgtcgcaaacaatagccctgcaagactctacaaca 439 Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatatgctgccttggcacctctt 498 || ||||||||||| |||||||||||||| |||||||| |||||||| |||||||| || Sbjct: 440 gtcaagtttgaaatatgggatactgctggtcaagagaggtatgctgctttggcaccactc 499 Query: 499 tactacagaggagctgctgctgcggttgttgtctatgacataactagcccagaatcattt 558 || || | || || |||| ||| ||| |||||||||| ||||| ||||||||||| || Sbjct: 500 tattatcgtggtgcagctgttgcagttattgtctatgatataacaagcccagaatctttc 559 Query: 559 aagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggtattgtcatg 618 | ||||| || || ||||| ||||| || ||||||||||| || |||| ||| || ||| Sbjct: 560 agcaaagcgcagtactgggttaaggagctacaaaaacatggaaaccctgatatagtaatg 619 Query: 619 gttttggttggtaataaagctgatct 644 | |||||||||||||||||||||| Sbjct: 620 gcactggttggtaataaagctgatct 645 Score = 44.1 bits (22), Expect = 0.93 Identities = 70/86 (81%) Strand = Plus / Plus Query: 685 tatgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatata 744 |||||||||||||| | ||||| || || ||||| || ||||| || | ||||||||| Sbjct: 686 tatgcagagaagaatggaatgttttttatagagacatctgcaaagactgcagataatata 745 Query: 745 aatcaagtatttgaggaaatcgcgaa 770 ||| || | ||||||||||| ||||| Sbjct: 746 aatgaactgtttgaggaaattgcgaa 771
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 163 bits (82), Expect = 1e-36 Identities = 100/106 (94%) Strand = Plus / Minus Query: 478 tatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgac 537 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 2840679 tatgctgccttggcacctctttactacagaggagctgctgctgcagttgttgtctacgac 2840620 Query: 538 ataactagcccagaatcatttaagaaagcacaatattgggtgaagg 583 |||||||| ||||||||||||| ||||||||||| |||||||||| Sbjct: 2840619 ataactagtccagaatcatttagcaaagcacaatactgggtgaagg 2840574 Score = 137 bits (69), Expect = 8e-29 Identities = 90/97 (92%) Strand = Plus / Minus Query: 380 aggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaatag 439 |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 2840973 aggtaactgtcggtgcatcatttttatcacaaacattggctttggaggactcaacaatag 2840914 Query: 440 tgaagtttgaaatctgggatactgctggacaagagag 476 |||| |||||||| |||||||| |||||||||||||| Sbjct: 2840913 tgaaatttgaaatatgggataccgctggacaagagag 2840877 Score = 121 bits (61), Expect = 5e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 581 aggaacttcaaaaacatggtaatcctggtattgtcatggttttggttggtaataaagctg 640 ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 2840208 aggaacttcaaaaacatggtagtcctgatattatcatggttttggttggtaataaagctg 2840149 Query: 641 atctacatgaaagtcga 657 |||||||||||| |||| Sbjct: 2840148 atctacatgaaaatcga 2840132 Score = 103 bits (52), Expect = 1e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 296 agttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttc 355 ||||||||||||| || ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 2841175 agttggtattgcttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttc 2841116 Query: 356 gcggtcagttcgatccaacttccaaggt 383 | |||||||| ||||| ||||||||||| Sbjct: 2841115 gtggtcagtttgatcccacttccaaggt 2841088 Score = 99.6 bits (50), Expect = 2e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 671 aggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaaaa 730 |||| ||||||||||||||||||||||| | |||| | ||||| ||||| |||||||| | Sbjct: 2840034 aggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaaaga 2839975 Query: 731 catctgataatataaatcaagtatttgagg 760 || ||||||||||||| ||||||||||||| Sbjct: 2839974 cagctgataatataaaccaagtatttgagg 2839945 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 26040193 gtgaagtttgaaatctgggatacagctgggcaggagagatat 26040234 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 758 aggaaatcgcgaagaggttgcccaagccaacaacgtcttgataa 801 ||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 2839253 aggaaattgcgaagaggttgcccaggccaacggcgtcttgataa 2839210 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Minus Query: 220 ccagctagaagcactggagggctgaacaatat 251 |||||| |||||||||||||| |||||||||| Sbjct: 2841347 ccagctcgaagcactggagggttgaacaatat 2841316 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tgcgactgcgagcgagcgagcgagcg 90 ||||| |||||||||||||||||||| Sbjct: 846559 tgcgagtgcgagcgagcgagcgagcg 846584 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 191 cgccggccatgggctgctcctcctccgcgccag 223 ||||||| ||||| ||||||||||||| ||||| Sbjct: 2841835 cgccggcgatgggttgctcctcctccgtgccag 2841803 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||| ||||| Sbjct: 34195625 aaatctgggatactgctggccaaga 34195649
>gb|AF304518.1|AF304518 Oryza sativa small GTP-binding protein RAB5B (rab5B) gene, complete cds Length = 2880 Score = 163 bits (82), Expect = 1e-36 Identities = 100/106 (94%) Strand = Plus / Plus Query: 478 tatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgac 537 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 1314 tatgctgccttggcacctctttactacagaggagctgctgctgcagttgttgtctacgac 1373 Query: 538 ataactagcccagaatcatttaagaaagcacaatattgggtgaagg 583 |||||||| ||||||||||||| ||||||||||| |||||||||| Sbjct: 1374 ataactagtccagaatcatttagcaaagcacaatactgggtgaagg 1419 Score = 137 bits (69), Expect = 8e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 380 aggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaatag 439 |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 1021 aggtaactgtcggtgcatcatttttatcacaaacattggctttggaggactcaacaatag 1080 Query: 440 tgaagtttgaaatctgggatactgctggacaagagag 476 |||| |||||||| |||||||| |||||||||||||| Sbjct: 1081 tgaaatttgaaatatgggataccgctggacaagagag 1117 Score = 113 bits (57), Expect = 1e-21 Identities = 72/77 (93%) Strand = Plus / Plus Query: 581 aggaacttcaaaaacatggtaatcctggtattgtcatggttttggttggtaataaagctg 640 ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 1785 aggaacttcaaaaacatggtagtcctgatattatcatggttttggttggtaataaagctg 1844 Query: 641 atctacatgaaagtcga 657 |||||||| ||| |||| Sbjct: 1845 atctacataaaaatcga 1861 Score = 103 bits (52), Expect = 1e-18 Identities = 79/88 (89%) Strand = Plus / Plus Query: 296 agttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttc 355 ||||||||||||| || ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 819 agttggtattgcttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttc 878 Query: 356 gcggtcagttcgatccaacttccaaggt 383 | |||||||| ||||| ||||||||||| Sbjct: 879 gtggtcagtttgatcccacttccaaggt 906 Score = 99.6 bits (50), Expect = 2e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaaaa 730 |||| ||||||||||||||||||||||| | |||| | ||||| ||||| |||||||| | Sbjct: 1959 aggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaaaga 2018 Query: 731 catctgataatataaatcaagtatttgagg 760 || ||||||||||||| ||||||||||||| Sbjct: 2019 cagctgataatataaaccaagtatttgagg 2048 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 758 aggaaatcgcgaagaggttgcccaagccaacaacgtcttgataa 801 ||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 2739 aggaaattgcgaagaggttgcccaggccaacggcgtcttgataa 2782 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 220 ccagctagaagcactggagggctgaacaatat 251 |||||| |||||||||||||| |||||||||| Sbjct: 647 ccagctcgaagcactggagggttgaacaatat 678 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 191 cgccggccatgggctgctcctcctccgcgccag 223 ||||||| ||||| ||||||||||||| ||||| Sbjct: 159 cgccggcgatgggttgctcctcctccgtgccag 191
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 163 bits (82), Expect = 1e-36 Identities = 100/106 (94%) Strand = Plus / Minus Query: 478 tatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgac 537 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 112524 tatgctgccttggcacctctttactacagaggagctgctgctgcagttgttgtctacgac 112465 Query: 538 ataactagcccagaatcatttaagaaagcacaatattgggtgaagg 583 |||||||| ||||||||||||| ||||||||||| |||||||||| Sbjct: 112464 ataactagtccagaatcatttagcaaagcacaatactgggtgaagg 112419 Score = 137 bits (69), Expect = 8e-29 Identities = 90/97 (92%) Strand = Plus / Minus Query: 380 aggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaatag 439 |||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 112818 aggtaactgtcggtgcatcatttttatcacaaacattggctttggaggactcaacaatag 112759 Query: 440 tgaagtttgaaatctgggatactgctggacaagagag 476 |||| |||||||| |||||||| |||||||||||||| Sbjct: 112758 tgaaatttgaaatatgggataccgctggacaagagag 112722 Score = 121 bits (61), Expect = 5e-24 Identities = 73/77 (94%) Strand = Plus / Minus Query: 581 aggaacttcaaaaacatggtaatcctggtattgtcatggttttggttggtaataaagctg 640 ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct: 112053 aggaacttcaaaaacatggtagtcctgatattatcatggttttggttggtaataaagctg 111994 Query: 641 atctacatgaaagtcga 657 |||||||||||| |||| Sbjct: 111993 atctacatgaaaatcga 111977 Score = 103 bits (52), Expect = 1e-18 Identities = 79/88 (89%) Strand = Plus / Minus Query: 296 agttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttc 355 ||||||||||||| || ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 113020 agttggtattgcttggtgactctggtgtagggaaaagttgcattgttcttcgctttgttc 112961 Query: 356 gcggtcagttcgatccaacttccaaggt 383 | |||||||| ||||| ||||||||||| Sbjct: 112960 gtggtcagtttgatcccacttccaaggt 112933 Score = 99.6 bits (50), Expect = 2e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 671 aggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaaaa 730 |||| ||||||||||||||||||||||| | |||| | ||||| ||||| |||||||| | Sbjct: 111879 aggaagcacaagagtatgcagagaagaataatatggttttcatcgagacatcagcaaaga 111820 Query: 731 catctgataatataaatcaagtatttgagg 760 || ||||||||||||| ||||||||||||| Sbjct: 111819 cagctgataatataaaccaagtatttgagg 111790 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 758 aggaaatcgcgaagaggttgcccaagccaacaacgtcttgataa 801 ||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 111098 aggaaattgcgaagaggttgcccaggccaacggcgtcttgataa 111055 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Minus Query: 220 ccagctagaagcactggagggctgaacaatat 251 |||||| |||||||||||||| |||||||||| Sbjct: 113192 ccagctcgaagcactggagggttgaacaatat 113161 Score = 42.1 bits (21), Expect = 3.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 191 cgccggccatgggctgctcctcctccgcgccag 223 ||||||| ||||| ||||||||||||| ||||| Sbjct: 113680 cgccggcgatgggttgctcctcctccgtgccag 113648
>ref|NM_115341.1| Arabidopsis thaliana ARA6; GTP binding (ARA6) mRNA, complete cds Length = 914 Score = 149 bits (75), Expect = 2e-32 Identities = 276/343 (80%) Strand = Plus / Plus Query: 310 ggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcgat 369 ||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| || Sbjct: 213 ggagactctggtgttggtaaaagttgtattgtccttcgatttgtacgtggtcagtttgac 272 Query: 370 ccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggaggat 429 | || || |||||||||||||| || || || || || ||||| | || ||| | || Sbjct: 273 gctacatctaaggtaactgttggagcctcgttcttgtcccaaactatagcattgcaagac 332 Query: 430 tcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgccttg 489 || || | ||||||||||||||| |||||||| || ||||| ||||| ||| |||| | Sbjct: 333 tctaccacagtgaagtttgaaatatgggatacagcaggacaggagaggtattctgctctt 392 Query: 490 gcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagccca 549 ||||| || |||||| | ||||||| | ||| ||| |||| ||||| ||||| ||||| Sbjct: 393 gcaccactatactaccgtggagctggagttgctgttattgtgtatgatataacaagccct 452 Query: 550 gaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggt 609 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| | || | | Sbjct: 453 gaatcgttcaagaaagcacagtattgggttaaggaactgcaaaagcatggaagcccagat 512 Query: 610 attgtcatggttttggttggtaataaagctgatctacatgaaa 652 ||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 513 attgttatggctctggttggtaacaaagctgatctacatgaaa 555 Score = 67.9 bits (34), Expect = 6e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 590 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 649 Query: 747 tcaagtatttgaggaaat 764 |||| | ||||||||||| Sbjct: 650 tcaactgtttgaggaaat 667
>gb|BT004392.1| Arabidopsis thaliana clone U20357 putative Rab family GTP-binding protein (Ara6) (At3g54840) mRNA, complete cds Length = 640 Score = 149 bits (75), Expect = 2e-32 Identities = 276/343 (80%) Strand = Plus / Plus Query: 310 ggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcgat 369 ||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| || Sbjct: 118 ggagactctggtgttggtaaaagttgtattgtccttcgatttgtacgtggtcagtttgac 177 Query: 370 ccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggaggat 429 | || || |||||||||||||| || || || || || ||||| | || ||| | || Sbjct: 178 gctacatctaaggtaactgttggagcctcgttcttgtcccaaactatagcattgcaagac 237 Query: 430 tcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgccttg 489 || || | ||||||||||||||| |||||||| || ||||| ||||| ||| |||| | Sbjct: 238 tctaccacagtgaagtttgaaatatgggatacagcaggacaggagaggtattctgctctt 297 Query: 490 gcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagccca 549 ||||| || |||||| | ||||||| | ||| ||| |||| ||||| ||||| ||||| Sbjct: 298 gcaccactatactaccgtggagctggagttgctgttattgtgtatgatataacaagccct 357 Query: 550 gaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggt 609 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| | || | | Sbjct: 358 gaatcgttcaagaaagcacagtattgggttaaggaactgcaaaagcatggaagcccagat 417 Query: 610 attgtcatggttttggttggtaataaagctgatctacatgaaa 652 ||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 418 attgttatggctctggttggtaacaaagctgatctacatgaaa 460 Score = 67.9 bits (34), Expect = 6e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 495 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 554 Query: 747 tcaagtatttgaggaaat 764 |||| | ||||||||||| Sbjct: 555 tcaactgtttgaggaaat 572
>gb|BT002860.1| Arabidopsis thaliana clone RAFL14-83-D17 (R20357) putative Rab family GTP-binding protein (Ara6) (At3g54840) mRNA, complete cds Length = 876 Score = 149 bits (75), Expect = 2e-32 Identities = 276/343 (80%) Strand = Plus / Plus Query: 310 ggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcgat 369 ||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| || Sbjct: 208 ggagactctggtgttggtaaaagttgtattgtccttcgatttgtacgtggtcagtttgac 267 Query: 370 ccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggaggat 429 | || || |||||||||||||| || || || || || ||||| | || ||| | || Sbjct: 268 gctacatctaaggtaactgttggagcctcgttcttgtcccaaactatagcattgcaagac 327 Query: 430 tcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgccttg 489 || || | ||||||||||||||| |||||||| || ||||| ||||| ||| |||| | Sbjct: 328 tctaccacagtgaagtttgaaatatgggatacagcaggacaggagaggtattctgctctt 387 Query: 490 gcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagccca 549 ||||| || |||||| | ||||||| | ||| ||| |||| ||||| ||||| ||||| Sbjct: 388 gcaccactatactaccgtggagctggagttgctgttattgtgtatgatataacaagccct 447 Query: 550 gaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggt 609 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| | || | | Sbjct: 448 gaatcgttcaagaaagcacagtattgggttaaggaactgcaaaagcatggaagcccagat 507 Query: 610 attgtcatggttttggttggtaataaagctgatctacatgaaa 652 ||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 508 attgttatggctctggttggtaacaaagctgatctacatgaaa 550 Score = 67.9 bits (34), Expect = 6e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 585 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 644 Query: 747 tcaagtatttgaggaaat 764 |||| | ||||||||||| Sbjct: 645 tcaactgtttgaggaaat 662
>dbj|AB007766.2| Arabidopsis thaliana mRNA for Ara6, complete cds Length = 914 Score = 149 bits (75), Expect = 2e-32 Identities = 276/343 (80%) Strand = Plus / Plus Query: 310 ggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagttcgat 369 ||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| || Sbjct: 213 ggagactctggtgttggtaaaagttgtattgtccttcgatttgtacgtggtcagtttgac 272 Query: 370 ccaacttccaaggtaactgttggtgcatcatttttatcacaaacattggcgttggaggat 429 | || || |||||||||||||| || || || || || ||||| | || ||| | || Sbjct: 273 gctacatctaaggtaactgttggagcctcgttcttgtcccaaactatagcattgcaagac 332 Query: 430 tcgacaatagtgaagtttgaaatctgggatactgctggacaagagagatatgctgccttg 489 || || | ||||||||||||||| |||||||| || ||||| ||||| ||| |||| | Sbjct: 333 tctaccacagtgaagtttgaaatatgggatacagcaggacaggagaggtattctgctctt 392 Query: 490 gcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagccca 549 ||||| || |||||| | ||||||| | ||| ||| |||| ||||| ||||| ||||| Sbjct: 393 gcaccactatactaccgtggagctggagttgctgttattgtgtatgatataacaagccct 452 Query: 550 gaatcatttaagaaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggt 609 ||||| || ||||||||||| |||||||| |||||||| ||||| ||||| | || | | Sbjct: 453 gaatcgttcaagaaagcacagtattgggttaaggaactgcaaaagcatggaagcccagat 512 Query: 610 attgtcatggttttggttggtaataaagctgatctacatgaaa 652 ||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 513 attgttatggctctggttggtaacaaagctgatctacatgaaa 555 Score = 67.9 bits (34), Expect = 6e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 590 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 649 Query: 747 tcaagtatttgaggaaat 764 |||| | ||||||||||| Sbjct: 650 tcaactgtttgaggaaat 667
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 129 bits (65), Expect = 2e-26 Identities = 89/97 (91%) Strand = Plus / Plus Query: 380 aggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaatag 439 |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct: 15357506 aggtgactgttggtgcatcatttttgtcacaaacattggcgttggaggattccacaacag 15357565 Query: 440 tgaagtttgaaatctgggatactgctggacaagagag 476 | ||||||||||| |||||||||||||| || ||||| Sbjct: 15357566 taaagtttgaaatatgggatactgctggtcaggagag 15357602 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 478 tatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgac 537 |||||||| |||||||||||||||||| | ||||||| ||| || ||||||| |||||| Sbjct: 15357792 tatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtatgac 15357851 Query: 538 ataactagcccagaatcatttaagaaagcacaatattgggtgaagg 583 ||||| || ||||||||||||| || |||||||| |||||||||| Sbjct: 15357852 ataacaagttcagaatcatttaacaaggcacaatactgggtgaagg 15357897 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 296 agttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttc 355 ||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||| | Sbjct: 15357309 agttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtcc 15357368 Query: 356 gcggtcagttcgatccaacttccaaggt 383 | |||||||| || || ||||| ||||| Sbjct: 15357369 gtggtcagtttgaccccacttcaaaggt 15357396 Score = 75.8 bits (38), Expect = 3e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaaaa 730 |||| ||||||||||||||||||| ||||| |||||| ||||| ||||| ||||| |||| Sbjct: 15358786 aggatgcacaagagtatgcagagaggaacactatgtttttcatcgagacatcagcgaaaa 15358845 Query: 731 catctgataatataaatcaagtatttgagg 760 | ||||||| ||||| ||| |||| |||| Sbjct: 15358846 cggctgataacataaaccaactattcgagg 15358875 Score = 60.0 bits (30), Expect = 2e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 581 aggaacttcaaaaacatggtaatcctggtattgtcatggttttggttggtaataaagctg 640 |||||||||| ||||| |||| ||| | ||| |||||| ||||||||| ||||| |||| Sbjct: 15358583 aggaacttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctg 15358642 Query: 641 atctacatga 650 |||||||||| Sbjct: 15358643 atctacatga 15358652 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 758 aggaaatcgcgaagaggttgcccaagccaaca 789 ||||||| |||||||||||||||| ||||||| Sbjct: 15359026 aggaaattgcgaagaggttgcccaggccaaca 15359057
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 129 bits (65), Expect = 2e-26 Identities = 89/97 (91%) Strand = Plus / Plus Query: 380 aggtaactgttggtgcatcatttttatcacaaacattggcgttggaggattcgacaatag 439 |||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct: 74869 aggtgactgttggtgcatcatttttgtcacaaacattggcgttggaggattccacaacag 74928 Query: 440 tgaagtttgaaatctgggatactgctggacaagagag 476 | ||||||||||| |||||||||||||| || ||||| Sbjct: 74929 taaagtttgaaatatgggatactgctggtcaggagag 74965 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 478 tatgctgccttggcacctctttactacagaggagctgctgctgcggttgttgtctatgac 537 |||||||| |||||||||||||||||| | ||||||| ||| || ||||||| |||||| Sbjct: 75155 tatgctgcattggcacctctttactaccggggagctggtgccgcaattgttgtgtatgac 75214 Query: 538 ataactagcccagaatcatttaagaaagcacaatattgggtgaagg 583 ||||| || ||||||||||||| || |||||||| |||||||||| Sbjct: 75215 ataacaagttcagaatcatttaacaaggcacaatactgggtgaagg 75260 Score = 79.8 bits (40), Expect = 2e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 296 agttggtattgctcggagactctggtgttggaaaaagctgcatcgttcttcgctttgttc 355 ||||||||||||| ||||| || |||||||| ||||| ||||| |||||||||||||| | Sbjct: 74672 agttggtattgcttggagattcaggtgttgggaaaagttgcattgttcttcgctttgtcc 74731 Query: 356 gcggtcagttcgatccaacttccaaggt 383 | |||||||| || || ||||| ||||| Sbjct: 74732 gtggtcagtttgaccccacttcaaaggt 74759 Score = 75.8 bits (38), Expect = 3e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaaaa 730 |||| ||||||||||||||||||| ||||| |||||| ||||| ||||| ||||| |||| Sbjct: 76149 aggatgcacaagagtatgcagagaggaacactatgtttttcatcgagacatcagcgaaaa 76208 Query: 731 catctgataatataaatcaagtatttgagg 760 | ||||||| ||||| ||| |||| |||| Sbjct: 76209 cggctgataacataaaccaactattcgagg 76238 Score = 60.0 bits (30), Expect = 2e-05 Identities = 60/70 (85%) Strand = Plus / Plus Query: 581 aggaacttcaaaaacatggtaatcctggtattgtcatggttttggttggtaataaagctg 640 |||||||||| ||||| |||| ||| | ||| |||||| ||||||||| ||||| |||| Sbjct: 75946 aggaacttcagaaacacggtagtccagatatgatcatggctttggttggaaataaggctg 76005 Query: 641 atctacatga 650 |||||||||| Sbjct: 76006 atctacatga 76015 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 758 aggaaatcgcgaagaggttgcccaagccaaca 789 ||||||| |||||||||||||||| ||||||| Sbjct: 76389 aggaaattgcgaagaggttgcccaggccaaca 76420
>emb|AJ006225.1|MCR6225 Mesembryanthemum crystallinum mRNA for small GTP-binding protein Length = 1028 Score = 117 bits (59), Expect = 8e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaagagagatatgctgccttggcacctctttac 501 ||||||||||| ||||| |||||||| ||||| || |||||||| | ||||| |||||| Sbjct: 381 aagtttgaaatatgggacactgctgggcaagaaaggtatgctgctctagcaccgctttac 440 Query: 502 tacagaggagctgctgctgcggttgttgtctatgacataactagcccagaatcatttaag 561 || |||||||||| | ||||||| |||| ||||| ||||| || || || || || | Sbjct: 441 tatcgaggagctgccgttgcggttattgtgtatgatataacaagtcctgagtccttcaca 500 Query: 562 aaagcacaatattgggtgaaggaacttcaaaaacatggtaatcctggtattgtcatggtt 621 ||||| ||||||||||| |||||||| ||||| ||||| | ||||| ||| |||||| | Sbjct: 501 aaagcgcaatattgggttaaggaactacaaaagcatgggagtcctgatataatcatggct 560 Query: 622 ttggttggtaataaagctgatct 644 |||||||| || ||||||||||| Sbjct: 561 ttggttgggaacaaagctgatct 583
>emb|BX825971.1|CNS0A4ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 392 Score = 67.9 bits (34), Expect = 6e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 91 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 150 Query: 747 tcaagtatttgaggaaat 764 |||| | ||||||||||| Sbjct: 151 tcaactgtttgaggaaat 168 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 609 tattgtcatggttttggttggtaataaagctgatctacatgaaa 652 |||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 13 tattgttatggctctggttggtaacaaagctgatctacatgaaa 56
>ref|NM_001057381.1| Oryza sativa (japonica cultivar-group) Os03g0666500 (Os03g0666500) mRNA, complete cds Length = 1099 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 362 gtgaagtttgaaatctgggatacagctgggcaggagagatat 403
>gb|AC135792.3| Oryza sativa chromosome 3 BAC OSJNBa0056E06 genomic sequence, complete sequence Length = 140720 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 59036 gtgaagtttgaaatctgggatacagctgggcaggagagatat 58995
>emb|AL049655.2|ATF28P10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28P10 Length = 90736 Score = 60.0 bits (30), Expect = 2e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 687 tgcagagaagaacagtatgttattcatggagacgtcagcaaaaacatctgataatataaa 746 ||||||||||||| | ||||| ||||| ||||||||||| || ||| | ||||| ||||| Sbjct: 66861 tgcagagaagaacggcatgttcttcattgagacgtcagccaagacagccgataacataaa 66802 Query: 747 tcaagtatttgagg 760 |||| | ||||||| Sbjct: 66801 tcaactgtttgagg 66788 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 609 tattgtcatggttttggttggtaataaagctgatctacatgaaa 652 |||||| |||| | |||||||||| ||||||||||||||||||| Sbjct: 67043 tattgttatggctctggttggtaacaaagctgatctacatgaaa 67000 Score = 52.0 bits (26), Expect = 0.004 Identities = 77/94 (81%) Strand = Plus / Minus Query: 490 gcacctctttactacagaggagctgctgctgcggttgttgtctatgacataactagccca 549 ||||| || |||||| | ||||||| | ||| ||| |||| ||||| ||||| ||||| Sbjct: 67475 gcaccactatactaccgtggagctggagttgctgttattgtgtatgatataacaagccct 67416 Query: 550 gaatcatttaagaaagcacaatattgggtgaagg 583 ||||| || ||||||||||| |||||||| |||| Sbjct: 67415 gaatcgttcaagaaagcacagtattgggttaagg 67382 Score = 48.1 bits (24), Expect = 0.060 Identities = 48/56 (85%) Strand = Plus / Minus Query: 310 ggagactctggtgttggaaaaagctgcatcgttcttcgctttgttcgcggtcagtt 365 ||||||||||||||||| ||||| || || || ||||| ||||| || |||||||| Sbjct: 67893 ggagactctggtgttggtaaaagttgtattgtccttcgatttgtacgtggtcagtt 67838 Score = 46.1 bits (23), Expect = 0.24 Identities = 35/39 (89%) Strand = Plus / Minus Query: 438 agtgaagtttgaaatctgggatactgctggacaagagag 476 ||||||||||||||| |||||||| || ||||| ||||| Sbjct: 67623 agtgaagtttgaaatatgggatacagcaggacaggagag 67585
>dbj|AK100036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150K06, full insert sequence Length = 1046 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 339 gtgaagtttgaaatctgggatacagctgggcaggagagatat 380
>dbj|AK067459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107F02, full insert sequence Length = 891 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 247 gtgaagtttgaaatctgggatacagctgggcaggagagatat 288
>dbj|AK061203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-B04, full insert sequence Length = 1101 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 364 gtgaagtttgaaatctgggatacagctgggcaggagagatat 405
>emb|CT985952.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 855 Score = 58.0 bits (29), Expect = 6e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagata 479 ||||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 122 gtgaagtttgagatctgggatacagctggccaagagagata 162
>ref|XM_650285.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (30.t00041) partial mRNA Length = 588 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||||||||||||||| |||||| Sbjct: 175 tttgaaatttgggatactgctggacaagaaagatat 210
>dbj|AB054582.1| Entamoeba histolytica EhRab5 gene for small GTPase Rab5, complete cds Length = 709 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||||||||||||||| |||||| Sbjct: 205 tttgaaatttgggatactgctggacaagaaagatat 240
>gb|BC068736.1| Xenopus laevis hypothetical protein MGC81204, mRNA (cDNA clone MGC:81204 IMAGE:6318542), complete cds Length = 1153 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagata 479 ||||||||||||||||| || |||||||||||||| Sbjct: 482 tttgaaatctgggatacagcaggacaagagagata 516
>ref|XM_647795.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (101.t00018) partial mRNA Length = 591 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagatatgct 483 ||||||||||||||||||||||||| |||| |||| Sbjct: 161 aaatctgggatactgctggacaagaaagatttgct 195
>dbj|AB054580.1| Entamoeba histolytica EhRabD1 mRNA for small GTPase RabD1, complete cds Length = 613 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagatatgct 483 ||||||||||||||||||||||||| |||| |||| Sbjct: 161 aaatctgggatactgctggacaagaaagatttgct 195
>emb|Z28239.1|SCYKR014C S.cerevisiae chromosome XI reading frame ORF YKR014c Length = 2012 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 445 tttgaaatctgggatactgctggacaagagagata 479 ||||||||||||||||||||||| ||||| ||||| Sbjct: 940 tttgaaatctgggatactgctggtcaagaaagata 906
>emb|X76174.1|SCYPT52 S.cerevisiae YPT52 gene Length = 2471 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 445 tttgaaatctgggatactgctggacaagagagata 479 ||||||||||||||||||||||| ||||| ||||| Sbjct: 1423 tttgaaatctgggatactgctggtcaagaaagata 1389
>emb|X64941.1|NPGTPBPM N.plumbaginifolia mRNA for small GTP binding protein Length = 870 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggacaagagag 476 |||||||||||| || ||||||||||||||||| ||||| Sbjct: 174 agtgaagtttgagatatgggatactgctggacaggagag 212
>gb|DQ333156.1| Synthetic construct Saccharomyces cerevisiae clone FLH112672.01X YPT52 gene, complete sequence Length = 705 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagata 479 ||||||||||||||||||||||| ||||| ||||| Sbjct: 184 tttgaaatctgggatactgctggtcaagaaagata 218
>ref|XM_452813.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C13728g predicted mRNA Length = 627 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctgg 467 |||||||||||||||||||||||||| Sbjct: 169 aagtttgaaatctgggatactgctgg 194
>gb|BT013315.1| Lycopersicon esculentum clone 135000F, mRNA sequence Length = 1546 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagag 476 ||||||||||| ||||||||||||||||| || ||||| Sbjct: 217 gtgaagtttgagatctgggatactgctggtcaggagag 254
>gb|BT012776.1| Lycopersicon esculentum clone 113755R, mRNA sequence Length = 1003 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagag 476 ||||||||||| ||||||||||||||||| || ||||| Sbjct: 215 gtgaagtttgagatctgggatactgctggtcaggagag 252
>gb|AY220750.1| Limulus polyphemus Rab11-1b mRNA, complete cds Length = 2519 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| |||||| Sbjct: 438 atctgggatactgctggacaagaaagatat 467
>gb|AY220749.1| Limulus polyphemus Rab11-1a mRNA, complete cds Length = 1045 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| |||||| Sbjct: 371 atctgggatactgctggacaagaaagatat 400
>gb|AY220748.1| Limulus polyphemus Rab11-1c mRNA, complete cds Length = 3037 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| |||||| Sbjct: 357 atctgggatactgctggacaagaaagatat 386
>emb|CR932657.1|CNS0KYDI Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||||||||||||||||||| ||||||||| Sbjct: 1561 aaatctgggatactgctggataagagagat 1590
>emb|X63875.1|NTRAB5 N.tabacum SR1 mRNA Nt-rab5 Length = 712 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagag 476 ||||||||||| ||||||||||||||||| || ||||| Sbjct: 273 gtgaagtttgagatctgggatactgctggtcaggagag 310
>emb|BX039831.1|CNS092WB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10BC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 619 Score = 52.0 bits (26), Expect = 0.004 Identities = 38/42 (90%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggacaagagagata 479 ||||||||| ||||||||||| ||||||||||| || ||||| Sbjct: 490 agtgaagttcgaaatctgggacactgctggacaggaaagata 531
>emb|Z37503.1|VFRABGTPB V.faba mRNA for guanine nucleotide regulatory protein Length = 873 Score = 52.0 bits (26), Expect = 0.004 Identities = 50/58 (86%) Strand = Plus / Plus Query: 502 tacagaggagctgctgctgcggttgttgtctatgacataactagcccagaatcattta 559 |||||||| ||||||||||| | ||||||||||||| |||||| |||| ||||||| Sbjct: 344 tacagaggcgctgctgctgctatcattgtctatgacatcactagctcagattcattta 401
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 52.0 bits (26), Expect = 0.004 Identities = 26/26 (100%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctgg 467 |||||||||||||||||||||||||| Sbjct: 1173497 aagtttgaaatctgggatactgctgg 1173522 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 ||||| ||||||||||||||||||||| Sbjct: 1091438 tgggacactgctggacaagagagatat 1091464
>emb|AJ437656.1|SCH437656 Simmondsia chinensis mRNA for Rab-related small GTP-binding protein (rab gene) Length = 837 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagag 476 |||||||||||||| |||||||| ||||| |||||||| Sbjct: 205 gtgaagtttgaaatatgggatacggctggtcaagagag 242
>gb|U03611.1|PTU03611 Paramecium tetraurelia 51s clone plg-1 guanine nucleotide regulatory protein gene, partial cds Length = 404 Score = 52.0 bits (26), Expect = 0.004 Identities = 29/30 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||||||||||||||||||| ||||||||| Sbjct: 119 aaatctgggatactgctggataagagagat 148
>ref|XM_001013126.1| Tetrahymena thermophila SB210 Ras family protein (TTHERM_00294940) mRNA, complete cds Length = 2181 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 1688 aaatctgggatactgctggacaaga 1712
>emb|CT832607.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA010F03, full insert sequence Length = 939 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 285 aaatctgggatactgctggacaaga 309
>dbj|AK243329.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100058B03, full insert sequence Length = 943 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 270 aaatctgggatactgctggacaaga 294
>ref|NM_001054141.1| Oryza sativa (japonica cultivar-group) Os02g0653800 (Os02g0653800) mRNA, complete cds Length = 660 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 227 aaatctgggatactgctggacaaga 251
>ref|NM_001048737.1| Oryza sativa (japonica cultivar-group) Os01g0179700 (Os01g0179700) mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 285 aaatctgggatactgctggacaaga 309
>dbj|AK229171.1| Arabidopsis thaliana mRNA for AtRab76, complete cds, clone: RAFL16-46-G12 Length = 968 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 314 tgggatactgctggacaagagagat 338
>ref|NM_179016.1| Arabidopsis thaliana GTP binding (AT4G09720) mRNA, complete cds Length = 852 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 191 tgggatactgctggacaagagagat 215
>ref|NM_117040.2| Arabidopsis thaliana GTP binding (AT4G09720) mRNA, complete cds Length = 975 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 314 tgggatactgctggacaagagagat 338
>gb|AY737682.1| Aiptasia pulchella Rab5 protein mRNA, complete cds Length = 1410 Score = 50.1 bits (25), Expect = 0.015 Identities = 28/29 (96%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggaca 470 |||||||||||||||||||| |||||||| Sbjct: 369 aagtttgaaatctgggatacagctggaca 397
>gb|AY618047.1| Sterkiella histriomuscorum clone UGC1O0002_M05_R genomic sequence Length = 1241 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagaga 475 ||||||||||||||||||||||||| Sbjct: 287 atctgggatactgctggacaagaga 311
>gb|AY617371.1| Sterkiella histriomuscorum clone UGC1O0002_B15_R genomic sequence Length = 1241 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagaga 475 ||||||||||||||||||||||||| Sbjct: 295 atctgggatactgctggacaagaga 319
>ref|XM_457265.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B07095g) partial mRNA Length = 627 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 179 aaatctgggatactgctggacaaga 203
>ref|NM_060080.2| Caenorhabditis elegans RAB family member (rab-5) (rab-5) mRNA, complete cds Length = 1086 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 448 gaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||| |||||||| |||||| Sbjct: 219 gaaatctgggatactgcaggacaagaaagatat 251
>emb|BX052473.1|CNS09CNH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Minus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 724 agtgaagttcgaaatctgggaaactgctggaca 692
>emb|BX052472.1|CNS09CNG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3CC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1001 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 556 agtgaagttcgaaatctgggacactgctggaca 588
>emb|BX032716.1|CNS08XEO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA48DB06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 322 agtgaagttcgaaatctgggacactgctggaca 354
>emb|BX028734.1|CNS08UC2 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 756 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Minus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 719 agtgaagttcgaaatctgggaaactgctggaca 687
>emb|BX028733.1|CNS08UC1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1007 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 493 agtgaagttcgaaatctgggacactgctggaca 525
>emb|BX020822.1|CNS08O8A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30CG12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 516 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 192 agtgaagttcgaaatctgggacactgctggaca 224
>emb|X94335.1|SC130KBXV S.cerevisiae 130kb DNA fragment from chromosome XV Length = 129528 Score = 50.1 bits (25), Expect = 0.015 Identities = 34/37 (91%) Strand = Plus / Minus Query: 442 aagtttgaaatctgggatactgctggacaagagagat 478 ||||||||||| ||||| |||||||| |||||||||| Sbjct: 14185 aagtttgaaatatgggacactgctgggcaagagagat 14149
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Minus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 560383 aaatctgggatactgctggacaaga 560359
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 151193 tgggatactgctggacaagagagat 151217
>emb|AL049482.1|ATF17A8 Arabidopsis thaliana DNA chromosome 4, BAC clone F17A8 (ESSA project) Length = 128071 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 31892 tgggatactgctggacaagagagat 31916
>dbj|AK069903.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J02, full insert sequence Length = 1043 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 286 aaatctgggatactgctggacaaga 310
>dbj|AK059888.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C02, full insert sequence Length = 938 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||||||||| Sbjct: 295 aaatctgggatactgctggacaaga 319
>ref|XM_555603.1| Anopheles gambiae str. PEST ENSANGP00000027173 (ENSANGG00000007604), partial mRNA Length = 513 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 312 agtgaagttcgaaatctgggacactgctggaca 344
>ref|XM_317586.2| Anopheles gambiae str. PEST ENSANGP00000023894 (ENSANGG00000007604), partial mRNA Length = 513 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 312 agtgaagttcgaaatctgggacactgctggaca 344
>ref|XM_317587.2| Anopheles gambiae str. PEST ENSANGP00000023388 (ENSANGG00000007604), partial mRNA Length = 890 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 467 agtgaagttcgaaatctgggacactgctggaca 499
>ref|XM_317584.2| Anopheles gambiae str. PEST ENSANGP00000022645 (ENSANGG00000007604), partial mRNA Length = 916 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 493 agtgaagttcgaaatctgggacactgctggaca 525
>ref|XM_317588.2| Anopheles gambiae str. PEST ENSANGP00000010093 (ENSANGG00000007604), partial mRNA Length = 966 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 543 agtgaagttcgaaatctgggacactgctggaca 575
>ref|XM_317585.2| Anopheles gambiae str. PEST ENSANGP00000022624 (ENSANGG00000007604), partial mRNA Length = 916 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggaca 470 ||||||||| ||||||||||| ||||||||||| Sbjct: 493 agtgaagttcgaaatctgggacactgctggaca 525
>gb|DQ331651.1| Synthetic construct Saccharomyces cerevisiae clone FLH202186.01X VPS21 gene, complete sequence Length = 633 Score = 50.1 bits (25), Expect = 0.015 Identities = 34/37 (91%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaagagagat 478 ||||||||||| ||||| |||||||| |||||||||| Sbjct: 169 aagtttgaaatatgggacactgctgggcaagagagat 205
>emb|Z29338.1|SCVPS21G S.cerevisiae gene for VPS21 protein Length = 1115 Score = 50.1 bits (25), Expect = 0.015 Identities = 34/37 (91%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaagagagat 478 ||||||||||| ||||| |||||||| |||||||||| Sbjct: 451 aagtttgaaatatgggacactgctgggcaagagagat 487
>emb|X76173.1|SCYPT51 S.cerevisiae YPT51 gene Length = 1418 Score = 50.1 bits (25), Expect = 0.015 Identities = 34/37 (91%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaagagagat 478 ||||||||||| ||||| |||||||| |||||||||| Sbjct: 669 aagtttgaaatatgggacactgctgggcaagagagat 705
>emb|Z74997.1|SCYOR089C S.cerevisiae chromosome XV reading frame ORF YOR089c Length = 2589 Score = 50.1 bits (25), Expect = 0.015 Identities = 34/37 (91%) Strand = Plus / Minus Query: 442 aagtttgaaatctgggatactgctggacaagagagat 478 ||||||||||| ||||| |||||||| |||||||||| Sbjct: 2127 aagtttgaaatatgggacactgctgggcaagagagat 2091
>emb|Z81516.1|CEF26H9 Caenorhabditis elegans Cosmid F26H9, complete sequence Length = 32263 Score = 50.1 bits (25), Expect = 0.015 Identities = 31/33 (93%) Strand = Plus / Plus Query: 448 gaaatctgggatactgctggacaagagagatat 480 ||||||||||||||||| |||||||| |||||| Sbjct: 21663 gaaatctgggatactgcaggacaagaaagatat 21695
>dbj|AB071851.1| Arabidopsis thaliana mRNA for AtRab76, complete cds Length = 621 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagat 478 ||||||||||||||||||||||||| Sbjct: 184 tgggatactgctggacaagagagat 208
>ref|XM_001004224.1| PREDICTED: Mus musculus hypothetical protein LOC668884 (LOC668884), mRNA Length = 309 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Minus Query: 70 ctgcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||||| Sbjct: 147 ctgcgagcgagcgagcgagcgaac 124
>ref|NM_124890.1| Arabidopsis thaliana GTP binding (AT5G55080) mRNA, complete cds Length = 669 Score = 48.1 bits (24), Expect = 0.060 Identities = 27/28 (96%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| |||| Sbjct: 198 ctgggatactgctggacaagagaaatat 225
>gb|BC106313.1| Xenopus laevis RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:130824 IMAGE:7973880), complete cds Length = 1920 Score = 48.1 bits (24), Expect = 0.060 Identities = 33/36 (91%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||| ||||| |||||||||||| Sbjct: 418 tttgaaatttgggatacagctggtcaagagagatat 453
>ref|NM_203671.1| Xenopus tropicalis hypothetical protein MGC75714 (MGC75714), mRNA gb|BC061274.1| Xenopus tropicalis hypothetical protein MGC75714, mRNA (cDNA clone MGC:75714 IMAGE:5380755), complete cds Length = 1713 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Plus Query: 310 ggagactctggtgttggaaaaagc 333 |||||||||||||||||||||||| Sbjct: 231 ggagactctggtgttggaaaaagc 254
>gb|AC122255.2| Mus musculus BAC clone RP23-178F22 from chromosome 3, complete sequence Length = 185132 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Plus Query: 70 ctgcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||||| Sbjct: 151617 ctgcgagcgagcgagcgagcgaac 151640
>gb|AC113307.12| Mus musculus chromosome 3, clone RP23-437A2, complete sequence Length = 202835 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Plus Query: 70 ctgcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||||| Sbjct: 54925 ctgcgagcgagcgagcgagcgaac 54948
>gb|BC043866.1| Xenopus laevis RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:53713 IMAGE:4889660), complete cds Length = 1886 Score = 48.1 bits (24), Expect = 0.060 Identities = 33/36 (91%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||| ||||| |||||||||||| Sbjct: 411 tttgaaatttgggatacagctggtcaagagagatat 446
>emb|CR933405.1| Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Minus Query: 449 aaatctgggatactgctggacaagagagatat 480 |||| |||||||||||||||||||||| |||| Sbjct: 1775 aaatatgggatactgctggacaagagaaatat 1744
>ref|XM_647684.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (105.t00020) partial mRNA Length = 636 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagatat 480 |||| |||||||||||||||||||| |||||| Sbjct: 185 aaatttgggatactgctggacaagaaagatat 216
>dbj|AB054587.1| Entamoeba histolytica EhRab11B mRNA for small GTPase Rab11B, complete cds Length = 703 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagatat 480 |||| |||||||||||||||||||| |||||| Sbjct: 185 aaatttgggatactgctggacaagaaagatat 216
>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence Length = 992211 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Minus Query: 442 aagtttgaaatctgggatactgctggacaaga 473 ||||||||||| |||||||||||||| ||||| Sbjct: 730398 aagtttgaaatatgggatactgctggtcaaga 730367
>dbj|AB010071.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCO15 Length = 82918 Score = 48.1 bits (24), Expect = 0.060 Identities = 27/28 (96%) Strand = Plus / Minus Query: 453 ctgggatactgctggacaagagagatat 480 ||||||||||||||||||||||| |||| Sbjct: 11394 ctgggatactgctggacaagagaaatat 11367
>ref|XM_446696.1| Candida glabrata CBS138, CAGL0G07689g partial mRNA Length = 648 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaaga 473 ||||||||||| |||||||||||||| ||||| Sbjct: 169 aagtttgaaatatgggatactgctggtcaaga 200
>ref|XM_672033.1| Plasmodium berghei strain ANKA GTP binding protein RAB5 (PB000519.01.0) partial mRNA Length = 462 Score = 48.1 bits (24), Expect = 0.060 Identities = 33/36 (91%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||| ||||||||||| |||||| Sbjct: 49 tttgaaatatgggatacagctggacaagaaagatat 84
>ref|XM_723215.1| Plasmodium yoelii yoelii str. 17XNL Rab5c GTPase (PY01029) partial mRNA Length = 549 Score = 48.1 bits (24), Expect = 0.060 Identities = 33/36 (91%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagatat 480 |||||||| |||||||| || ||||||||||||||| Sbjct: 166 tttgaaatatgggatacagccggacaagagagatat 201
>emb|AL672243.12| Mouse DNA sequence from clone RP23-343M4 on chromosome X, complete sequence Length = 184872 Score = 48.1 bits (24), Expect = 0.060 Identities = 24/24 (100%) Strand = Plus / Plus Query: 68 gactgcgagcgagcgagcgagcga 91 |||||||||||||||||||||||| Sbjct: 92414 gactgcgagcgagcgagcgagcga 92437
>gb|M28215.1|HUMRAB5A Homo sapiens GTP-binding protein (RAB5) mRNA, complete cds Length = 719 Score = 48.1 bits (24), Expect = 0.060 Identities = 30/32 (93%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaaga 473 |||||||||||||||||||| ||||| ||||| Sbjct: 264 aagtttgaaatctgggatacagctggtcaaga 295
>ref|NM_001053188.1| Oryza sativa (japonica cultivar-group) Os02g0312600 (Os02g0312600) mRNA, complete cds Length = 893 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 452 tctgggatactgctggacaagag 474 ||||||||||||||||||||||| Sbjct: 256 tctgggatactgctggacaagag 278
>dbj|AK226813.1| Arabidopsis thaliana mRNA for small Ras-like GTP-binding protein, complete cds, clone: RAFL07-94-D18 Length = 3282 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 260 ctgggatactgctggacaagaga 282
>ref|NM_001034743.2| Bos taurus RAB5B, member RAS oncogene family (RAB5B), mRNA gb|BC118226.1| Bos taurus RAB5B, member RAS oncogene family, mRNA (cDNA clone MGC:139406 IMAGE:8279589), complete cds Length = 1652 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Plus Query: 670 caggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaa 728 ||||| ||||||| ||||||||| | |||||| || | ||||||||||| |||||||| Sbjct: 537 caggaagcacaagcctatgcagaggacaacagtttgctgttcatggagacatcagcaaa 595
>ref|NM_122009.2| Arabidopsis thaliana RAN2; GTP binding (RAN2) mRNA, complete cds Length = 1021 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 263 ctgggatactgctggacaagaga 285
>gb|AF180471.1| Mus musculus Lpin1 (Kiaa0188) mRNA, complete cds Length = 5175 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2836 gcgagcgagcgagcgagcgagccgagg 2810
>ref|NM_201485.1| Danio rerio RAB5A, member RAS oncogene family (rab5a), mRNA gb|BC047803.1| Danio rerio RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:56009 IMAGE:3819814), complete cds Length = 2408 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 709 ttcatggagacgtcagcaaaaac 731 ||||||||||||||||||||||| Sbjct: 672 ttcatggagacgtcagcaaaaac 694
>gb|AC148176.11| Medicago truncatula clone mth2-3j15, complete sequence Length = 119267 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 20982 ctgggatactgctggacaagaga 21004 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 26121 ctgggatactgctggacaagaga 26143 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 31644 ctgggatactgctggacaagaga 31666
>ref|XM_452774.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C12881g predicted mRNA Length = 1122 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 ||||| ||||||||||||||||||||| Sbjct: 544 tgggacactgctggacaagagagatat 570
>gb|AY563050.1| Nicotiana sylvestris RAN (ran) gene, complete cds Length = 6657 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 4710 ctgggatactgctggacaagaga 4732
>gb|AY563049.1| Nicotiana sylvestris RAN (ran) mRNA, complete cds Length = 1001 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 255 ctgggatactgctggacaagaga 277
>gb|AC159631.2| Mus musculus BAC clone RP24-177F21 from chromosome 12, complete sequence Length = 171538 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 66836 gcgagcgagcgagcgagcgagccgagg 66810
>gb|BC063966.1| Danio rerio RAB5A, member RAS oncogene family, mRNA (cDNA clone MGC:77676 IMAGE:6997315), complete cds Length = 1858 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 709 ttcatggagacgtcagcaaaaac 731 ||||||||||||||||||||||| Sbjct: 667 ttcatggagacgtcagcaaaaac 689
>gb|AF376055.1| Oryza sativa putative Rop family GTPase ROP5 mRNA, complete cds Length = 915 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 452 tctgggatactgctggacaagag 474 ||||||||||||||||||||||| Sbjct: 257 tctgggatactgctggacaagag 279
>gb|BT000659.1| Arabidopsis thaliana clone RAFL06-07-D07 (R10565) putative RAN2 small Ras GTP-binding nuclear protein (Ran-2) (At5g20020) mRNA, complete cds Length = 927 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 259 ctgggatactgctggacaagaga 281
>dbj|AB091551.1| Crassostrea gigas DNA, microsatellite locus TNFRI-Crgi6 Length = 504 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 456 ggatactgctggacaagagagat 478 ||||||||||||||||||||||| Sbjct: 412 ggatactgctggacaagagagat 390
>gb|BT000424.1| Arabidopsis thaliana RAN2 small Ras-like GTP-binding nuclear protein (Ran-2) (At5g20020) mRNA, complete cds Length = 861 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 263 ctgggatactgctggacaagaga 285
>gb|L16787.1|TOBRANB Nicotiana tabacum small ras-related protein (Ran-B1) mRNA, complete cds Length = 989 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 234 ctgggatactgctggacaagaga 256
>gb|AY062997.1| Arabidopsis thaliana putative RAN2 small Ras GTP-binding nuclear protein Ran-2 (At5g20020) mRNA, complete cds Length = 697 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 198 ctgggatactgctggacaagaga 220
>gb|AF370337.1| Arabidopsis thaliana putative RAN2 small Ras GTP-binding nuclear protein Ran-2 (At5g20020) mRNA, complete cds Length = 938 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 256 ctgggatactgctggacaagaga 278
>gb|BC042462.1| Mus musculus lipin 1, mRNA (cDNA clone MGC:36848 IMAGE:4211202), complete cds Length = 5161 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2910 gcgagcgagcgagcgagcgagccgagg 2884
>emb|BX950869.14| Zebrafish DNA sequence from clone CH211-1J13 in linkage group 19, complete sequence Length = 91362 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 709 ttcatggagacgtcagcaaaaac 731 ||||||||||||||||||||||| Sbjct: 55784 ttcatggagacgtcagcaaaaac 55806
>dbj|AK154837.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630108J21 product:lipin 1, full insert sequence Length = 4104 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2998 gcgagcgagcgagcgagcgagccgagg 2972
>dbj|AK019539.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921514G21 product:lipin 1, full insert sequence Length = 4200 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 3094 gcgagcgagcgagcgagcgagccgagg 3068
>emb|CR932531.1|CNS0KY9V Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||| |||||||||||||||||| Sbjct: 1443 tgggatacagctggacaagagagatat 1469
>emb|CR932523.1|CNS0KY9N Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 ||||||||||| ||||||||||||||| Sbjct: 1630 tgggatactgcaggacaagagagatat 1656
>ref|XM_650118.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (34.t00008) partial mRNA Length = 573 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||||||||||||||||| |||| Sbjct: 175 tgggatactgctggacaagagaaatat 201
>ref|XM_647506.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (112.t00002) partial mRNA Length = 642 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||||||||||||||| |||||| Sbjct: 187 tgggatactgctggacaagaaagatat 213
>emb|Z73960.1|LJRAN1B L.japonicus mRNA for small GTP-binding protein, RAN1B Length = 825 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 164 ctgggatactgctggacaagaga 186
>emb|Z73959.1|LJRAN1A L.japonicus mRNA for small GTP-binding protein, RAN1A Length = 976 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 163 ctgggatactgctggacaagaga 185
>dbj|AK030921.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830456M19 product:lipin 1, full insert sequence Length = 4116 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2860 gcgagcgagcgagcgagcgagccgagg 2834
>dbj|AK014526.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631420P06 product:lipin 1, full insert sequence Length = 4131 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2917 gcgagcgagcgagcgagcgagccgagg 2891
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ccggccgaaggcgccggccatgg 202 ||||||||||||||||||||||| Sbjct: 6725538 ccggccgaaggcgccggccatgg 6725516 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ccggccgaaggcgccggccatgg 202 ||||||||||||||||||||||| Sbjct: 6752575 ccggccgaaggcgccggccatgg 6752553
>dbj|AB197067.1| Entamoeba histolytica gene for small GTPase EhRabF3, partial cds Length = 687 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||||||||||||||||| |||| Sbjct: 175 tgggatactgctggacaagagaaatat 201
>dbj|AB197058.1| Entamoeba histolytica gene for small GTPase EhRab11D, partial cds Length = 700 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||||||||||||||| |||||| Sbjct: 187 tgggatactgctggacaagaaagatat 213
>ref|XM_697418.1| PREDICTED: Danio rerio hypothetical protein LOC554855 (LOC554855), mRNA Length = 2378 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 709 ttcatggagacgtcagcaaaaac 731 ||||||||||||||||||||||| Sbjct: 672 ttcatggagacgtcagcaaaaac 694
>gb|BT006264.1| Arabidopsis thaliana At5g20020 mRNA, complete cds Length = 666 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 198 ctgggatactgctggacaagaga 220
>emb|X97380.1|ATRRAN2 A.thaliana mRNA for AtRan2 protein Length = 897 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 217 ctgggatactgctggacaagaga 239
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 454 tgggatactgctggacaagagagatat 480 |||||||| |||||||||||||||||| Sbjct: 239035 tgggatacagctggacaagagagatat 239009
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ccggccgaaggcgccggccatgg 202 ||||||||||||||||||||||| Sbjct: 146494 ccggccgaaggcgccggccatgg 146472
>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04, complete sequence Length = 173903 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 180 ccggccgaaggcgccggccatgg 202 ||||||||||||||||||||||| Sbjct: 1639 ccggccgaaggcgccggccatgg 1617
>emb|AJ010592.2|GTAJ10592 Guillardia theta DNA for complete sequence of nucleomorph chromosome 2 Length = 180915 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Minus Query: 451 atctgggatactgctggacaaga 473 ||||||||||||||||||||||| Sbjct: 28052 atctgggatactgctggacaaga 28030
>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 Length = 84334 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 52292 ctgggatactgctggacaagaga 52314
>emb|BX832599.1|CNS09ZWD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZC12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 910 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 228 ctgggatactgctggacaagaga 250
>dbj|AK058414.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-D01, full insert sequence Length = 855 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 452 tctgggatactgctggacaagag 474 ||||||||||||||||||||||| Sbjct: 264 tctgggatactgctggacaagag 286
>gb|BT021518.1| Bos taurus RAB5C, member RAS oncogene family (RAB5C), mRNA, complete cds Length = 1045 Score = 46.1 bits (23), Expect = 0.24 Identities = 50/59 (84%) Strand = Plus / Plus Query: 670 caggaggcacaagagtatgcagagaagaacagtatgttattcatggagacgtcagcaaa 728 ||||| ||||||| ||||||||| | |||||| || | ||||||||||| |||||||| Sbjct: 622 caggaagcacaagcctatgcagaggacaacagtttgctgttcatggagacatcagcaaa 680
>emb|X97383.1|ATDRAN2 A.thaliana atran2 gene Length = 3544 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 1638 ctgggatactgctggacaagaga 1660
>ref|NM_001005723.1| Xenopus tropicalis RAB5B, member RAS oncogene family (rab5b), mRNA gb|BC075323.1| Xenopus tropicalis RAB5B, member RAS oncogene family, mRNA (cDNA clone MGC:88997 IMAGE:7004179), complete cds Length = 2525 Score = 46.1 bits (23), Expect = 0.24 Identities = 32/35 (91%) Strand = Plus / Plus Query: 445 tttgaaatctgggatactgctggacaagagagata 479 ||||||||||||||||| || ||||||||| |||| Sbjct: 515 tttgaaatctgggatacagcaggacaagagcgata 549
>dbj|D12543.1|PEAGTPBP04 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra4 Length = 864 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagatat 480 |||||||||||||||||||| |||||| Sbjct: 231 tgggatactgctggacaagaaagatat 257
>dbj|AB093214.1| Mus musculus mRNA for mKIAA0188 protein Length = 3390 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2176 gcgagcgagcgagcgagcgagccgagg 2150
>gb|AY106609.1| Zea mays PCO140750 mRNA sequence Length = 634 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 66 gcgactgcgagcgagcgagcgag 88 ||||||||||||||||||||||| Sbjct: 65 gcgactgcgagcgagcgagcgag 87
>ref|NM_172950.2| Mus musculus lipin 1 (Lpin1), transcript variant 1, mRNA Length = 4515 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2857 gcgagcgagcgagcgagcgagccgagg 2831
>ref|NM_015763.3| Mus musculus lipin 1 (Lpin1), transcript variant 2, mRNA Length = 4561 Score = 46.1 bits (23), Expect = 0.24 Identities = 26/27 (96%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaaccgagg 98 |||||||||||||||||||| |||||| Sbjct: 2903 gcgagcgagcgagcgagcgagccgagg 2877
>gb|L16790.1|ATHRAN2R Arabidopsis thaliana small Ras-like GTP-binding protein (Ran-2) mRNA, 3' end Length = 833 Score = 46.1 bits (23), Expect = 0.24 Identities = 23/23 (100%) Strand = Plus / Plus Query: 453 ctgggatactgctggacaagaga 475 ||||||||||||||||||||||| Sbjct: 145 ctgggatactgctggacaagaga 167
>gb|DQ244598.1| Zea mays clone 9510 mRNA sequence Length = 930 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagag 474 |||| ||||||||||||||||||||| Sbjct: 286 aaatttgggatactgctggacaagag 311
>dbj|AK241301.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065140A22, full insert sequence Length = 1544 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 671 aggaggcacaagagtatgcaga 692 |||||||||||||||||||||| Sbjct: 712 aggaggcacaagagtatgcaga 691
>ref|XM_001204439.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC767526), mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>ref|XM_001204440.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC591162), mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>ref|XM_001177669.1| PREDICTED: Strongylocentrotus purpuratus similar to Rab5 protein (LOC578627), mRNA Length = 1126 Score = 44.1 bits (22), Expect = 0.93 Identities = 37/42 (88%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaagag 474 |||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 470 acaacagtaaagtttgaaatctgggacacagccggacaagag 511
>ref|XM_001198375.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC762666), mRNA Length = 1734 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>ref|XM_001193692.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC761923), mRNA Length = 1734 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>ref|XM_778785.2| PREDICTED: Strongylocentrotus purpuratus similar to Rab5 protein (LOC578627), mRNA Length = 1126 Score = 44.1 bits (22), Expect = 0.93 Identities = 37/42 (88%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaagag 474 |||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 470 acaacagtaaagtttgaaatctgggacacagccggacaagag 511
>ref|XM_001199469.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC763479), mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>ref|NM_001073872.1| Oryza sativa (japonica cultivar-group) Os12g0631100 (Os12g0631100) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 332 gtgaagttcgaaatctgggatactgc 357
>ref|NM_001061892.1| Oryza sativa (japonica cultivar-group) Os05g0371600 (Os05g0371600) mRNA, complete cds Length = 912 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 671 aggaggcacaagagtatgcaga 692 |||||||||||||||||||||| Sbjct: 606 aggaggcacaagagtatgcaga 585
>ref|NM_001054253.1| Oryza sativa (japonica cultivar-group) Os02g0674800 (Os02g0674800) mRNA, complete cds Length = 3435 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 210 gcgagcgagcgagcgagcgaac 189
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 12543938 gcgagcgagcgagcgagcgaac 12543917
>gb|DQ831861.1| Beta vulgaris M14 putative GTP binding protein mRNA, complete cds Length = 1051 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagag 474 |||| ||||||||||||||||||||| Sbjct: 338 aaatttgggatactgctggacaagag 363
>ref|XM_395496.3| PREDICTED: Apis mellifera similar to Rab30 CG9100-PB, isoform B, transcript variant 1 (LOC412030), mRNA Length = 958 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 ||||||||||||||||||| ||||| |||| Sbjct: 516 aaatctgggatactgctggtcaagaaagat 545
>ref|NM_001044111.1| Bombyx mori small GTP binding protein RAB8 (LOC732877), mRNA gb|DQ525203.1| Bombyx mori ras-related GTP-binding protein Rab8 mRNA, complete cds Length = 1145 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 250 aaatatgggatactgctggtcaagagagat 279
>gb|DQ443136.1| Bombyx mori small GTP binding protein RAB8 mRNA, complete cds Length = 1198 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 273 aaatatgggatactgctggtcaagagagat 302
>ref|XM_984887.1| PREDICTED: Mus musculus RIKEN cDNA 8030451N04 gene, transcript variant 4 (8030451N04Rik), mRNA Length = 8872 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 469 gcgagcgagcgagcgagcgaac 448
>ref|XM_908452.2| PREDICTED: Mus musculus tripartite motif protein 33 (Trim33), mRNA Length = 8608 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 516 gcgagcgagcgagcgagcgaac 495
>ref|NM_123324.1| Arabidopsis thaliana GTP binding (AT5G39620) mRNA, complete cds Length = 615 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||||||||| |||| Sbjct: 170 aaatttgggatactgctggacaagaaagat 199
>ref|NM_100520.2| Arabidopsis thaliana ARA2; GTP binding (ARA2) mRNA, complete cds Length = 937 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 240 tgggatactgctggtcaagagagata 265
>gb|AC164574.15| Mus musculus 6 BAC RP23-446I7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188358 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 183312 gcgagcgagcgagcgagcgaac 183333
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tgcgactgcgagcgagcgagcgagcg 90 ||||| |||||||||||||||||||| Sbjct: 3096 tgcgagtgcgagcgagcgagcgagcg 3121
>ref|XM_637217.1| Dictyostelium discoideum AX4 Rab GTPase (rab1B) mRNA, complete cds Length = 621 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||||||||||||||| |||||||| |||| Sbjct: 179 aaatctgggatactgcaggacaagaaagat 208
>gb|AC167694.2| Daphnia pulex clone JGIAZSN-5P22, complete sequence Length = 35398 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 919 aaagctagcttatatttcatcg 940 |||||||||||||||||||||| Sbjct: 18028 aaagctagcttatatttcatcg 18049
>gb|AE001399.1| Plasmodium falciparum 3D7 chromosome 2 section 36 of 73 of the complete sequence Length = 12029 Score = 44.1 bits (22), Expect = 0.93 Identities = 34/38 (89%) Strand = Plus / Minus Query: 445 tttgaaatctgggatactgctggacaagagagatatgc 482 ||||| || |||||||| ||||||||||| |||||||| Sbjct: 690 tttgatatatgggatacagctggacaagaaagatatgc 653
>gb|BT019232.1| Zea mays clone Contig905.F mRNA sequence Length = 881 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Minus Query: 449 aaatctgggatactgctggacaagag 474 |||| ||||||||||||||||||||| Sbjct: 548 aaatttgggatactgctggacaagag 523
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcaga 692 |||||||||||||||||||||| Sbjct: 119765 aggaggcacaagagtatgcaga 119786
>ref|XM_604404.2| PREDICTED: Bos taurus similar to Surfeit locus protein 4 (LOC526045), mRNA Length = 3443 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaaccgag 97 |||||||||||||||||||| ||||| Sbjct: 215 gcgagcgagcgagcgagcgagccgag 240
>gb|AY690483.1| Triticum aestivum rab GTP-binding protein mRNA, complete cds Length = 1280 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagagatat 480 ||||||||||| ||||| |||||||||||| Sbjct: 438 atctgggatacggctggccaagagagatat 467
>ref|NM_053170.1| Mus musculus tripartite motif protein 33 (Trim33), mRNA gb|AY458590.1| Mus musculus transcriptional intermediary factor 1 gamma (Tif1g) mRNA, complete cds Length = 5686 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 469 gcgagcgagcgagcgagcgaac 448
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcaga 692 |||||||||||||||||||||| Sbjct: 2961 aggaggcacaagagtatgcaga 2982
>gb|AC104709.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1214_E03, complete sequence Length = 144601 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 41913 gcgagcgagcgagcgagcgaac 41892
>ref|XM_455135.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F01232g predicted mRNA Length = 633 Score = 44.1 bits (22), Expect = 0.93 Identities = 37/42 (88%) Strand = Plus / Plus Query: 438 agtgaagtttgaaatctgggatactgctggacaagagagata 479 |||||| |||||||| ||||||||||| || || |||||||| Sbjct: 186 agtgaattttgaaatttgggatactgcagggcaggagagata 227
>gb|BT013145.1| Lycopersicon esculentum clone 134140R, mRNA sequence Length = 1221 Score = 44.1 bits (22), Expect = 0.93 Identities = 34/38 (89%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagag 476 ||||||||||| || |||||||||||||| || ||||| Sbjct: 242 gtgaagtttgagatatgggatactgctgggcaggagag 279
>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209011 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 13953 gcgagcgagcgagcgagcgaac 13932
>gb|AC121833.3| Mus musculus BAC clone RP24-69C16 from chromosome 3, complete sequence Length = 224456 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 14800 gcgagcgagcgagcgagcgaac 14779
>gb|AC164089.4| Mus musculus BAC clone RP23-70G12 from chromosome 3, complete sequence Length = 223387 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 95213 gcgagcgagcgagcgagcgaac 95192
>gb|DQ019039.1| Trichomonas vaginalis strain G3 small Rab GTPase RabC6 gene, complete cds Length = 579 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 452 tctgggatactgctggacaaga 473 |||||||||||||||||||||| Sbjct: 167 tctgggatactgctggacaaga 188
>ref|XM_790740.1| PREDICTED: Strongylocentrotus purpuratus similar to RAB30 (LOC591162), mRNA Length = 651 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 176 aaatatgggatactgctggtcaagagagat 205
>gb|AF332428.1| Arabidopsis thaliana putative GTP-binding protein RAB11D (At1g06400) mRNA, complete cds Length = 651 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 199 tgggatactgctggtcaagagagata 224
>gb|AY096439.1| Arabidopsis thaliana putative GTP-binding protein (At1g06400) mRNA, complete cds Length = 682 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 199 tgggatactgctggtcaagagagata 224
>gb|AY065306.1| Arabidopsis thaliana putative GTP-binding protein RAB11D (At1g06400) mRNA, complete cds Length = 957 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 244 tgggatactgctggtcaagagagata 269
>gb|AY029301.1| Oryza sativa small GTP-binding protein (rab5A) mRNA, complete cds Length = 1125 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 355 gtgaagttcgaaatctgggatactgc 380
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 8829 gcgagcgagcgagcgagcgaac 8808
>gb|AC023681.5| Drosophila melanogaster X BAC RP98-39P3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 153733 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 33671 gcgagcgagcgagcgagcgaac 33692
>emb|CR932600.1|CNS0KYBV Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Minus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| ||||| ||||||||||||||||||| Sbjct: 1757 aaatatgggacactgctggacaagagagat 1728
>ref|XM_646244.1| Entamoeba histolytica HM-1:IMSS Rab family GTPase (170.t00022) partial mRNA Length = 618 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||||||||| |||| Sbjct: 179 aaatttgggatactgctggacaagaaagat 208
>dbj|AK044604.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930026H04 product:hypothetical protein, full insert sequence Length = 1713 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 66 gcgagcgagcgagcgagcgaac 45
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 27058864 gtgaagttcgaaatctgggatactgc 27058889
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 671 aggaggcacaagagtatgcaga 692 |||||||||||||||||||||| Sbjct: 17743007 aggaggcacaagagtatgcaga 17743028 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 27445783 gcgagcgagcgagcgagcgaac 27445762
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 27513197 gcgagcgagcgagcgagcgaac 27513218 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 66 gcgactgcgagcgagcgagcgagcg 90 ||||| ||||||||||||||||||| Sbjct: 1783169 gcgacggcgagcgagcgagcgagcg 1783193
>gb|AC078999.4| Homo sapiens chromosome 18, clone RP11-104G8, complete sequence Length = 156593 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 918 taaagctagcttatatttcatc 939 |||||||||||||||||||||| Sbjct: 128250 taaagctagcttatatttcatc 128229
>dbj|AB054578.1| Entamoeba histolytica EhRab1A mRNA for small GTPase Rab1A, complete cds Length = 656 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||||||||| |||| Sbjct: 179 aaatttgggatactgctggacaagaaagat 208
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 44.1 bits (22), Expect = 0.93 Identities = 37/42 (88%) Strand = Plus / Minus Query: 438 agtgaagtttgaaatctgggatactgctggacaagagagata 479 |||||| |||||||| ||||||||||| || || |||||||| Sbjct: 114877 agtgaattttgaaatttgggatactgcagggcaggagagata 114836
>emb|AJ292320.1|OSA292320 Oryza sativa mRNA for RAB5A protein Length = 969 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 355 gtgaagttcgaaatctgggatactgc 380
>gb|AC153516.8| Mus musculus 10 BAC RP23-390D8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 197506 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 65333 gcgagcgagcgagcgagcgaac 65354
>gb|AF296447.1| Toxoplasma gondii Rab5 (rab5) mRNA, complete cds Length = 971 Score = 44.1 bits (22), Expect = 0.93 Identities = 37/42 (88%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgctggacaagagagatat 480 |||||||| || ||||||||||| || |||||||| |||||| Sbjct: 380 gtgaagttcgagatctgggataccgccggacaagaaagatat 421
>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0657H12 Length = 142688 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 104919 gcgagcgagcgagcgagcgaac 104940
>gb|AC084672.1|CBRG47I10 Caenorhabditis briggsae cosmid G47I10, complete sequence Length = 43706 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagag 474 |||| ||||||||||||||||||||| Sbjct: 30922 aaatttgggatactgctggacaagag 30947
>dbj|D01024.1|ATHARA2 Arabidopsis thaliana mRNA for small GTP-binding protein (ara-2), complete cds Length = 844 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 232 tgggatactgctggtcaagagagata 257
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 tgcgactgcgagcgagcgagcgagcg 90 ||||| |||||||||||||||||||| Sbjct: 142106 tgcgagtgcgagcgagcgagcgagcg 142131
>dbj|AK111544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045A10, full insert sequence Length = 3437 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 212 gcgagcgagcgagcgagcgaac 191
>emb|BX815056.1|CNS0ACVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS2ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 831 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagagagata 479 |||||||||||||| ||||||||||| Sbjct: 216 tgggatactgctggtcaagagagata 241
>dbj|AK066784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013078I11, full insert sequence Length = 1032 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 288 gtgaagttcgaaatctgggatactgc 313
>dbj|AK061116.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E04, full insert sequence Length = 1043 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 356 gtgaagttcgaaatctgggatactgc 381
>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 218969 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 205267 gcgagcgagcgagcgagcgaac 205246
>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14, complete sequence Length = 238499 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 726 aaaaacatctgataatataaat 747 |||||||||||||||||||||| Sbjct: 64724 aaaaacatctgataatataaat 64703
>dbj|D12545.1|PEAGTPBP06 Pisum sativum mRNA for GTP-binding protein, complete cds, clone:pra6 Length = 855 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagag 476 ||||||||||||||||| |||||||| Sbjct: 214 atctgggatactgctggtcaagagag 239
>gb|AY105385.1| Zea mays PCO152591 mRNA sequence Length = 977 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagag 474 |||| ||||||||||||||||||||| Sbjct: 357 aaatttgggatactgctggacaagag 382
>gb|AY104686.1| Zea mays PCO088233 mRNA sequence Length = 1239 Score = 44.1 bits (22), Expect = 0.93 Identities = 79/98 (80%) Strand = Plus / Plus Query: 442 aagtttgaaatctgggatactgctggacaagagagatatgctgccttggcacctctttac 501 ||||| ||||||||||||||||| || || ||||| ||| | |||||| || | ||| Sbjct: 374 aagttcgaaatctgggatactgccgggcaggagaggtatcatagcttggctcccatgtac 433 Query: 502 tacagaggagctgctgctgcggttgttgtctatgacat 539 || || || || |||||||| |||||||||||||||| Sbjct: 434 tataggggtgcagctgctgccattgttgtctatgacat 471
>emb|CR354589.19| Zebrafish DNA sequence from clone CH211-93L13 in linkage group 17, complete sequence Length = 114273 Score = 44.1 bits (22), Expect = 0.93 Identities = 22/22 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaac 93 |||||||||||||||||||||| Sbjct: 98441 gcgagcgagcgagcgagcgaac 98420
>gb|BC084867.1| Xenopus laevis hypothetical LOC495396, mRNA (cDNA clone MGC:85538 IMAGE:6876179), complete cds Length = 1717 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagagag 476 |||||||| ||||||||||||||||| Sbjct: 202 atctgggacactgctggacaagagag 227
>emb|AL713905.6|CNS07YQ5 Oryza sativa chromosome 12, . BAC OJ1584_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131300 Score = 44.1 bits (22), Expect = 0.93 Identities = 25/26 (96%) Strand = Plus / Minus Query: 439 gtgaagtttgaaatctgggatactgc 464 |||||||| ||||||||||||||||| Sbjct: 97373 gtgaagttcgaaatctgggatactgc 97348
>dbj|AB071853.1| Arabidopsis thaliana mRNA for AtRab78, complete cds Length = 615 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||||||||| |||| Sbjct: 170 aaatttgggatactgctggacaagaaagat 199
>gb|L14928.1|VIRRAB7P Vigna aconitifolia (Rab7p) mRNA, complete cds Length = 1086 Score = 44.1 bits (22), Expect = 0.93 Identities = 28/30 (93%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaagagagat 478 |||| |||||||||||||| |||||||||| Sbjct: 355 aaatatgggatactgctgggcaagagagat 384
>ref|NM_001003317.1| Canis familiaris RAB5A, member RAS oncogene family (RAB5A), mRNA gb|M35520.1|DOGRAB5A C.familiaris GTP-binding protein (rab5) mRNA, complete cds Length = 796 Score = 44.1 bits (22), Expect = 0.93 Identities = 34/38 (89%) Strand = Plus / Plus Query: 697 aacagtatgttattcatggagacgtcagcaaaaacatc 734 |||||| | |||||||||||||| ||||| |||||||| Sbjct: 583 aacagtttattattcatggagacatcagctaaaacatc 620 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 319 acaacagtaaagtttgaaatatgggatacagctggtcaaga 359
>gb|AC187985.5| Canis Familiaris chromosome X, clone XX-492O14, complete sequence Length = 181510 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 72 gcgagcgagcgagcgagcgaa 92 ||||||||||||||||||||| Sbjct: 39449 gcgagcgagcgagcgagcgaa 39429 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaa 92 ||||||||||||||||||||| Sbjct: 119550 gcgagcgagcgagcgagcgaa 119570
>ref|XM_001237031.1| PREDICTED: Gallus gallus ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) (RAC2), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 tgggatactgctggacaagag 474 ||||||||||||||||||||| Sbjct: 342 tgggatactgctggacaagag 362
>gb|AC193137.1| Homo sapiens chromosome 14 clone WI2-2240L7, complete sequence Length = 41076 Score = 42.1 bits (21), Expect = 3.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 72 gcgagcgagcgagcgagcgaa 92 ||||||||||||||||||||| Sbjct: 8403 gcgagcgagcgagcgagcgaa 8423
>emb|CT833569.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA057O09, full insert sequence Length = 942 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||| ||||| Sbjct: 374 aaatctgggatactgctggccaaga 398
>emb|CT833194.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA060B10, full insert sequence Length = 1156 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagaga 475 ||||||||||| ||||||||||||| Sbjct: 322 atctgggatacagctggacaagaga 346
>gb|DQ993360.1| Suid herpesvirus 1 strain hn96 glycoprotein H gene, complete cds Length = 2092 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ggcgccggccatgggctgctcctcc 213 ||||||||||||| ||||||||||| Sbjct: 1836 ggcgccggccatgagctgctcctcc 1812
>dbj|AK237137.1| Sus scrofa mRNA, clone:SPL010003E02, expressed in spleen Length = 1620 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 637 acaacagtaaagtttgaaatatgggatacagctggtcaaga 677
>dbj|AK237022.1| Sus scrofa mRNA, clone:PBL010078C01, expressed in periphral blood mononuclear cell Length = 1573 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 616 acaacagtaaagtttgaaatatgggatacagctggtcaaga 656
>dbj|AK239425.1| Sus scrofa mRNA, clone:THY010103B03, expressed in thymus Length = 1635 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 649 acaacagtaaagtttgaaatatgggatacagctggtcaaga 689
>dbj|AK238898.1| Sus scrofa mRNA, clone:THY010045A10, expressed in thymus Length = 1604 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 619 acaacagtaaagtttgaaatatgggatacagctggtcaaga 659
>dbj|AK231680.1| Sus scrofa mRNA, clone:LNG010007E10, expressed in lung Length = 1614 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 631 acaacagtaaagtttgaaatatgggatacagctggtcaaga 671
>gb|DQ917629.1| Sus scrofa RAB5A mRNA, complete cds Length = 648 Score = 42.1 bits (21), Expect = 3.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 433 acaatagtgaagtttgaaatctgggatactgctggacaaga 473 |||| ||| ||||||||||| |||||||| ||||| ||||| Sbjct: 199 acaacagtaaagtttgaaatatgggatacagctggtcaaga 239
>ref|NM_001061782.1| Oryza sativa (japonica cultivar-group) Os05g0341600 (Os05g0341600) mRNA, complete cds Length = 1170 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 451 atctgggatactgctggacaagaga 475 ||||||||||| ||||||||||||| Sbjct: 327 atctgggatacagctggacaagaga 351
>ref|NM_001058251.1| Oryza sativa (japonica cultivar-group) Os03g0819900 (Os03g0819900) mRNA, complete cds Length = 1022 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 ||||||||||||||||||| ||||| Sbjct: 391 aaatctgggatactgctggccaaga 415
>ref|XM_630118.2| Dictyostelium discoideum AX4 Rab GTPase (rabA) mRNA, complete cds Length = 606 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 aaatctgggatactgctggacaaga 473 |||| |||||||||||||||||||| Sbjct: 179 aaatttgggatactgctggacaaga 203
>tpg|BK001744.1| TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 3.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ggcgccggccatgggctgctcctcc 213 ||||||||||||| ||||||||||| Sbjct: 62418 ggcgccggccatgagctgctcctcc 62394 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 166,589,103 Number of extensions: 10270128 Number of successful extensions: 196180 Number of sequences better than 10.0: 383 Number of HSP's gapped: 196104 Number of HSP's successfully gapped: 446 Length of query: 976 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 953 Effective length of database: 18,503,978,556 Effective search space: 17634291563868 Effective search space used: 17634291563868 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
