ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9c16 |
|---|---|
| Clone Library Name | barley_pub |
>Q9UBB5:MBD2_HUMAN Methyl-CpG-binding domain protein 2 - Homo sapiens (Human)| Length = 411 Score = 40.4 bits (93), Expect = 0.017 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 9/117 (7%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P PPGW+++ +R S + VYY S +G+ RS +L +YL + D LS F Sbjct: 153 PALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVD------LSSF 206 Query: 916 SFKVPK------PPNRPR-QTEPIEPAKVPPPVHED-PVRNYMPVPHGEANPVTHIP 1062 F+ K N+ R + +P+ K P ++ P+R + VT+ P Sbjct: 207 DFRTGKMMPSKLQKNKQRLRNDPLNQNKGKPDLNTTLPIRQTASIFKQPVTKVTNHP 263
>Q9Z2E1:MBD2_MOUSE Methyl-CpG-binding domain protein 2 - Mus musculus (Mouse)| Length = 414 Score = 38.1 bits (87), Expect = 0.085 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P PPGW+++ +R S + VYY S +G+ RS +L +YL + D LS F Sbjct: 156 PALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVD------LSSF 209 Query: 916 SFKVPK 933 F+ K Sbjct: 210 DFRTGK 215
>P0C210:PRO_HTL1L Gag-Pro polyprotein - Human T-cell leukemia virus 1 (isolate| Melanesia mel5 subtype C) (HTLV-1) Length = 651 Score = 37.7 bits (86), Expect = 0.11 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 916 SFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 S P PP+ P P ++PPP E +PV H P TH P + DLQ Sbjct: 96 SHPAPPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGVPPTHRPWQMKDLQ 151
>P0C211:POL_HTL1L Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (isolate| Melanesia mel5 subtype C) (HTLV-1) Length = 1462 Score = 37.7 bits (86), Expect = 0.11 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 916 SFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 S P PP+ P P ++PPP E +PV H P TH P + DLQ Sbjct: 96 SHPAPPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGVPPTHRPWQMKDLQ 151
>P0C209:GAG_HTL1L Gag polyprotein - Human T-cell leukemia virus 1 (isolate Melanesia| mel5 subtype C) (HTLV-1) Length = 429 Score = 37.7 bits (86), Expect = 0.11 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = +1 Query: 916 SFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 S P PP+ P P ++PPP E +PV H P TH P + DLQ Sbjct: 96 SHPAPPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGVPPTHRPWQMKDLQ 151
>Q9Z2E2:MBD1_MOUSE Methyl-CpG-binding domain protein 1 - Mus musculus (Mouse)| Length = 636 Score = 37.4 bits (85), Expect = 0.15 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 13/93 (13%) Frame = +1 Query: 739 PHTPPGWERKITLRSEQGTRFAH--VYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQ 912 P PGW+R+ + R + G F +YY S G IRS EL +YL P C L+ Sbjct: 9 PALGPGWKRRESFR-KSGASFGRSDIYYQSPTGEKIRSKVELTRYL--GPAC----DLTL 61 Query: 913 FSFKV-----PKPPNRP------RQTEPIEPAK 978 F F+ P P P ++ +P +PAK Sbjct: 62 FDFRQGTLCHPIPKTHPLAVPSKKKKKPSKPAK 94
>P14738:FNBA_STAA8 Fibronectin-binding protein precursor - Staphylococcus aureus (strain| NCTC 8325) Length = 1018 Score = 37.4 bits (85), Expect = 0.15 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGE-ANPVTHIPVTLDLQVPVMLPKK 1104 P+ P P P EP K PP E+P + PV G+ PV I + P P+ Sbjct: 918 PETPTPPTPEVPAEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPTKKPQS 977 Query: 1105 RK 1110 +K Sbjct: 978 KK 979
>Q9Z2D8:MBD3_MOUSE Methyl-CpG-binding domain protein 3 - Mus musculus (Mouse)| Length = 285 Score = 36.2 bits (82), Expect = 0.32 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +1 Query: 739 PHTPPGWERK-ITLRSEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GWER+ + RS V+Y S +G+ RS +L +YL + LS F Sbjct: 9 PALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYL------GGSMDLSTF 62 Query: 916 SFKVPK 933 F+ K Sbjct: 63 DFRTGK 68
>O95983:MBD3_HUMAN Methyl-CpG-binding domain protein 3 - Homo sapiens (Human)| Length = 291 Score = 36.2 bits (82), Expect = 0.32 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = +1 Query: 739 PHTPPGWERK-ITLRSEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GWER+ + RS V+Y S +G+ RS +L +YL + LS F Sbjct: 9 PALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYL------GGSMDLSTF 62 Query: 916 SFKVPK 933 F+ K Sbjct: 63 DFRTGK 68
>Q9UIS9:MBD1_HUMAN Methyl-CpG-binding domain protein 1 - Homo sapiens (Human)| Length = 605 Score = 35.8 bits (81), Expect = 0.42 Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Frame = +1 Query: 739 PHTPPGWERKITLRSEQGT-RFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P PGW+R+ R T + YY S G IRS EL +YL P C L+ F Sbjct: 9 PALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYL--GPAC----DLTLF 62 Query: 916 SFK-----VPKPPNRP------RQTEPIEPAK 978 FK P P P ++ +P PAK Sbjct: 63 DFKQGILCYPAPKAHPVAVASKKRKKPSRPAK 94
>P10274:PRO_HTL1A Gag-Pro polyprotein - Human T-cell leukemia virus 1 (strain Japan| ATK-1 subtype A) (HTLV-1) Length = 651 Score = 35.4 bits (80), Expect = 0.55 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>P03362:POL_HTL1A Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (strain Japan| ATK-1 subtype A) (HTLV-1) Length = 1462 Score = 35.4 bits (80), Expect = 0.55 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>Q00566:MECP2_RAT Methyl-CpG-binding protein 2 - Rattus norvegicus (Rat)| Length = 492 Score = 35.4 bits (80), Expect = 0.55 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GW RK+ R S + VY I+ G+ RS EL Y E D L + F Sbjct: 98 PTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGD--TSLDPNDF 155 Query: 916 SFKVP--KPPNRPRQTEPIEPAKVPPP 990 F V P+R Q P +P P Sbjct: 156 DFTVTGRGSPSRREQKPPKKPKSPKAP 182
>Q9Z2D6:MECP2_MOUSE Methyl-CpG-binding protein 2 - Mus musculus (Mouse)| Length = 484 Score = 35.4 bits (80), Expect = 0.55 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GW RK+ R S + VY I+ G+ RS EL Y E D L + F Sbjct: 98 PTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGD--TSLDPNDF 155 Query: 916 SFKVP--KPPNRPRQTEPIEPAKVPPP 990 F V P+R Q P +P P Sbjct: 156 DFTVTGRGSPSRREQKPPKKPKSPKAP 182
>Q95LG8:MECP2_MACFA Methyl-CpG-binding protein 2 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 486 Score = 35.4 bits (80), Expect = 0.55 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GW RK+ R S + VY I+ G+ RS EL Y E D L + F Sbjct: 98 PTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGD--TSLDPNDF 155 Query: 916 SFKVP--KPPNRPRQTEPIEPAKVPPP 990 F V P+R Q P +P P Sbjct: 156 DFTVTGRGSPSRREQKPPKKPKSPKAP 182
>P51608:MECP2_HUMAN Methyl-CpG-binding protein 2 - Homo sapiens (Human)| Length = 486 Score = 35.4 bits (80), Expect = 0.55 Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = +1 Query: 739 PHTPPGWERKITLR-SEQGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQF 915 P P GW RK+ R S + VY I+ G+ RS EL Y E D L + F Sbjct: 98 PTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGD--TSLDPNDF 155 Query: 916 SFKVP--KPPNRPRQTEPIEPAKVPPP 990 F V P+R Q P +P P Sbjct: 156 DFTVTGRGSPSRREQKPPKKPKSPKAP 182
>P14077:GAG_HTL1M Gag polyprotein - Human T-cell leukemia virus 1 (strain Japan MT-2| subtype A) (HTLV-1) Length = 429 Score = 35.4 bits (80), Expect = 0.55 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>P03345:GAG_HTL1A Gag polyprotein - Human T-cell leukemia virus 1 (strain Japan ATK-1| subtype A) (HTLV-1) Length = 429 Score = 35.4 bits (80), Expect = 0.55 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>O08550:WBP7_MOUSE WW domain-binding protein 7 - Mus musculus (Mouse)| Length = 2713 Score = 34.3 bits (77), Expect = 1.2 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +1 Query: 904 LSQFSFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIP-VTLDLQ 1080 +S S +V K P R +P +P KV + PV P P E PV+ P V Sbjct: 542 VSARSSRVIKTPRRFMDEDPPKPPKVEASIVRPPVATSPPAPQ-EPVPVSSPPRVPTPPS 600 Query: 1081 VPVMLPKKRK 1110 PV LP+KR+ Sbjct: 601 TPVPLPEKRR 610
>Q7S747:EPL1_NEUCR Enhancer of polycomb-like protein 1 - Neurospora crassa| Length = 589 Score = 33.9 bits (76), Expect = 1.6 Identities = 20/58 (34%), Positives = 27/58 (46%) Frame = +1 Query: 880 PDCAAGLQLSQFSFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVT 1053 P A QL+Q SF P P Q +P + +P P + PV P P +A PV+ Sbjct: 533 PPGAVPQQLAQSSF-APGQPQPQSQPQPNQSQSLPLPQPQQPVAQPQPQPQPQAQPVS 589
>Q9YN02:RPOA_PRRS1 Replicase polyprotein 1ab - Porcine reproductive and respiratory| syndrome virus (strain 16244B) (PRRSV) Length = 3966 Score = 33.5 bits (75), Expect = 2.1 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 4/53 (7%) Frame = +1 Query: 940 NRPRQTEPIEPAKVPP----PVHEDPVRNYMPVPHGEANPVTHIPVTLDLQVP 1086 N PR T P P KV P PV P R +P P + P PV+L VP Sbjct: 806 NYPRWTPPPPPPKVQPRKTKPVKSLPERKPVPAPRRKVGPDCGSPVSLGGDVP 858
>P08297:NO75_SOYBN Early nodulin 75 precursor - Glycine max (Soybean)| Length = 309 Score = 33.5 bits (75), Expect = 2.1 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +1 Query: 919 FKVPKPPNRPRQTEP---IEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDLQVPV 1089 F P P +P EP +P PPPVH P Y P PH E P ++P + P Sbjct: 32 FYEPPPIEKPPTYEPPPFYKPPYYPPPVHHPP-PEYQP-PH-EKTPPEYLPPPHEKPPPE 88 Query: 1090 MLPKKRK 1110 LP K Sbjct: 89 YLPPHEK 95
>Q2HJ87:GMEB1_BOVIN Glucocorticoid modulatory element-binding protein 1 - Bos taurus| (Bovine) Length = 563 Score = 33.5 bits (75), Expect = 2.1 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Frame = +1 Query: 841 RSMKELKKYLEDNPDCAAGLQ-LSQFSFKVPKPPNRPRQTEPIEPAKV--PPPVHEDPVR 1011 R ++E KK +D+ + +Q + PKPP RPR P + PPVH+ Sbjct: 334 RQLEEQKKQAQDHRLKSQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVHQPQFT 393 Query: 1012 NYMPV---PHGEANPVTHIPV 1065 P+ P G++ + +IPV Sbjct: 394 VISPITITPVGQSFSMGNIPV 414
>P13983:EXTN_TOBAC Extensin precursor - Nicotiana tabacum (Common tobacco)| Length = 620 Score = 33.5 bits (75), Expect = 2.1 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +1 Query: 928 PKPPNRPRQT-EPIEPAKVPPPVHEDPVRNYMPVP 1029 P PP P T P PA PPP + P Y+P+P Sbjct: 307 PSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPLP 341 Score = 32.0 bits (71), Expect = 6.1 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 7/52 (13%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPP------PVHE-DPVRNYMPVPHGEANPVTHIP 1062 P PP+R Q +P PP P H+ P+R+ P P + P T+ P Sbjct: 216 PSPPSRGHQPQPPTHRHAPPTHRHAPPTHQPSPLRHLPPSPRRQPQPPTYSP 267
>Q9HLI6:HUTH_THEAC Probable histidine ammonia-lyase - Thermoplasma acidophilum| Length = 496 Score = 32.7 bits (73), Expect = 3.6 Identities = 16/61 (26%), Positives = 29/61 (47%) Frame = -3 Query: 662 GFHPWTYLHEKGTCTIFSRIFSYFSLLGIILHFWQVLHSTAYVSIVNFLFLGGTRKVFSP 483 G P+ + ++G I F L ++ +L + ++++F LGGT K F+P Sbjct: 178 GLKPYQFKEKEGVALINGTSFMSGILSIAVMDAHDILENAIRSALLSFEALGGTSKAFTP 237 Query: 482 W 480 W Sbjct: 238 W 238
>Q86UP3:ZFHX4_HUMAN Zinc finger homeobox protein 4 - Homo sapiens (Human)| Length = 3567 Score = 32.7 bits (73), Expect = 3.6 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +1 Query: 922 KVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDL 1077 K+P + P Q P P PPP P P P A P +PV+LDL Sbjct: 1981 KIPNTVSTPLQAPPPTPPPPPPPPPPPPPPP--PPPPPSAPPQVQLPVSLDL 2030
>Q00451:PRF1_SOLLC 36.4 kDa proline-rich protein - Solanum lycopersicum (Tomato)| (Lycopersicon esculentum) Length = 346 Score = 32.7 bits (73), Expect = 3.6 Identities = 18/60 (30%), Positives = 24/60 (40%) Frame = +1 Query: 931 KPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDLQVPVMLPKKRK 1110 KPP+ P+ + PPP H P + PH P+ H P + P PK K Sbjct: 76 KPPSTPKHPKHPPQKPCPPPSHHGPKPPIVKPPHVPRPPIVHPPPIVS---PPSTPKPPK 132 Score = 31.6 bits (70), Expect = 8.0 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = +1 Query: 922 KVPK-PPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDLQVPVMLP 1098 K PK PP P+ PI P V PP+ P+ P+ H P P + P++ P Sbjct: 129 KPPKTPPFTPKPPSPIPPI-VSPPIVYPPITPTPPIVHPPVTPKPPSPTPPIVSPPIVYP 187
>P04706:GLU2_MAIZE Glutelin-2 precursor - Zea mays (Maize)| Length = 223 Score = 32.7 bits (73), Expect = 3.6 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +1 Query: 958 EPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDLQVPVMLP 1098 +P P +PPPVH P + P H P H+P + L PV +P Sbjct: 29 QPPPPVHLPPPVHLPPPVHLPPPVH--LPPPVHLPPPVHLPPPVHVP 73
>P59764:DOCK4_MOUSE Dedicator of cytokinesis protein 4 - Mus musculus (Mouse)| Length = 1978 Score = 32.7 bits (73), Expect = 3.6 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = +1 Query: 925 VPKP-PNRPRQTEPI-EPAKVPPP--VHEDPVRNYMPVPHGEANPVTHIPVTL 1071 VP P P+ EP+ + +K PPP V+E +R +P+PH + PVT P L Sbjct: 1891 VPVPVPSFSGSEEPVRKESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPAL 1943
>P53046:ROM1_YEAST RHO1 GDP-GTP exchange protein 1 - Saccharomyces cerevisiae (Baker's| yeast) Length = 1155 Score = 32.3 bits (72), Expect = 4.7 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +1 Query: 847 MKELKKYLEDNPDCAAGLQLSQFSFKVPK 933 M +K+Y+ +NP+C+AG+ L Q+ PK Sbjct: 751 MPPIKRYVTENPNCSAGVLLPQYQTSNPK 779
>P14074:PRO_HTL1C Gag-Pro polyprotein - Human T-cell leukemia virus 1 (isolate Caribbea| HS-35 subtype A) (HTLV-1) Length = 651 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSSTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>P14078:POL_HTL1C Gag-Pro-Pol polyprotein - Human T-cell leukemia virus 1 (isolate| Caribbea HS-35 subtype A) (HTLV-1) Length = 1462 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSSTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>Q92576:PHF3_HUMAN PHD finger protein 3 - Homo sapiens (Human)| Length = 2039 Score = 32.3 bits (72), Expect = 4.7 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +1 Query: 898 LQLSQFSFKVPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIP 1062 L+ S F P PPN P Q+ P +PPP+ P + P PV H+P Sbjct: 1808 LKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVHLP 1862
>P14076:GAG_HTL1C Gag polyprotein - Human T-cell leukemia virus 1 (isolate Caribbea| HS-35 subtype A) (HTLV-1) Length = 429 Score = 32.3 bits (72), Expect = 4.7 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Frame = +1 Query: 928 PKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTL-DLQ 1080 P PP+ P ++PPP E +PV H P H P + DLQ Sbjct: 100 PPPPSSSTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQ 151
>Q6MG49:BAT3_RAT Large proline-rich protein BAT3 - Rattus norvegicus (Rat)| Length = 1096 Score = 32.3 bits (72), Expect = 4.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +1 Query: 292 ELQTMGSSPSNPVPNPDENSLSHPQPKESQYMLAD 396 EL G +P+ P P P+ N+ +HP P E +L + Sbjct: 243 ELPPSGPAPAGPAPAPETNAPNHPSPAEHVEVLQE 277
>Q92337:ABC1_SCHPO ATP-binding cassette transporter abc1 - Schizosaccharomyces pombe| (Fission yeast) Length = 1427 Score = 32.0 bits (71), Expect = 6.1 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 15/97 (15%) Frame = -3 Query: 803 ANLVPCSLLRVI----FLSHPGGV*GIPGLSIAHTMPLPSDISV-----------GSWHV 669 AN LLR+I FL++ + G S +PL +I++ +W Sbjct: 122 ANAFGLLLLRLISIYDFLTYSSWSFSVKGGSFLLLLPLAYNITLFLLVIIPLFFPRAWSP 181 Query: 668 TCGFHPWTYLHEKGTCTIFSRIFSYFSLLGIILHFWQ 558 T F + TC+IFS IF+Y L GII W+ Sbjct: 182 TVKFSKVARPSPEQTCSIFSLIFTYGWLNGIIWKSWK 218
>P52746:ZN142_HUMAN Zinc finger protein 142 - Homo sapiens (Human)| Length = 1687 Score = 32.0 bits (71), Expect = 6.1 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 22/124 (17%) Frame = +1 Query: 307 GSSPSNPVPNPD-ENSLSHPQPKESQYMLADKVVDQWDDSDTENSSGSASYQVVSYKNAQ 483 G +P+ +P + E S P Q ++ V++ + SDT+ S A + + + Sbjct: 90 GETPAPKLPPGEREPSQEAGTPLPGQETAEEENVEKEEKSDTQKDSQKAVDKGQGAQRLE 149 Query: 484 GE---------NTFLVPPKKRKFTIDTYAVE------------CSTCQKWRIIPSKLKYE 600 G+ T + P KR F T+ VE C CQK+ SKLK Sbjct: 150 GDVVSGTESLFKTHMCPECKRCFKKRTHLVEHLHLHFPDPSLQCPNCQKFFTSKSKLKTH 209 Query: 601 KIRE 612 +RE Sbjct: 210 LLRE 213
>Q9R0I7:YLPM1_MOUSE YLP motif-containing protein 1 - Mus musculus (Mouse)| Length = 1386 Score = 32.0 bits (71), Expect = 6.1 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 13/128 (10%) Frame = +1 Query: 742 HTPPGWERKITLRSEQGTRFAHVYYISLAGRTIRS----MKELKKYLEDNPDCAAGLQ-- 903 H WER+ L EQ + H + + ++ MK + YL++ + ++ Sbjct: 414 HLFQDWEREFQLWEEQLHSYPHKDQLQEYEKQWKTWQGHMKATQTYLQEKVNSFQTVKSQ 473 Query: 904 -LSQFSFKVP------KPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIP 1062 L + P PP P P+ P +PPPV + +P P G PV +P Sbjct: 474 YLGNMAMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPTSIP-PPGMPPPV--MP 530 Query: 1063 VTLDLQVP 1086 +L VP Sbjct: 531 PSLPTSVP 538
>P40453:UBP7_YEAST Ubiquitin carboxyl-terminal hydrolase 7 - Saccharomyces cerevisiae| (Baker's yeast) Length = 1071 Score = 32.0 bits (71), Expect = 6.1 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%) Frame = +1 Query: 754 GWER-KITLRSEQGTRFAHVYYISLAGRTIRS------MKELKKYLEDNPDCAAGLQLSQ 912 G+E+ K TL S +A Y+IS+ R +++ ++ + PD + Sbjct: 437 GYEKWKKTLHS-----YAQEYHISIEDYLYRPYSQKARLQQEQQQQQQQPDSQDSFSAKE 491 Query: 913 FSFKVPKPPNRPRQTEPIEPAKVPPP 990 S KVP+PP+ PI K PPP Sbjct: 492 SSTKVPEPPSWKPPDLPIRLRKRPPP 517
>Q8WZ42:TITIN_HUMAN Titin - Homo sapiens (Human)| Length = 34350 Score = 32.0 bits (71), Expect = 6.1 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 7/57 (12%) Frame = +1 Query: 961 PIEPAKVPP----PVHEDPVRNYMPVPHGEANP---VTHIPVTLDLQVPVMLPKKRK 1110 P+ P KVP PV E+ + +PVP + P V +P + +VPV++PKK K Sbjct: 10871 PVIPVKVPEVPRKPVPEE--KKPVPVPKKKEAPPAKVPEVPKKPEEKVPVLIPKKEK 10925
>Q1L8U8:STB1A_DANRE Histone-lysine N-methyltransferase SETDB1-A - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 1436 Score = 32.0 bits (71), Expect = 6.1 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 1/90 (1%) Frame = +1 Query: 763 RKITLRSE-QGTRFAHVYYISLAGRTIRSMKELKKYLEDNPDCAAGLQLSQFSFKVPKPP 939 R++T R G F H++Y S GR++ M+E++ YL + L++ V Sbjct: 953 RRMTARRRIDGKLFFHIFYRSPCGRSLCDMQEVQDYLFETRCDFLFLEMFCMDPFVLVNR 1012 Query: 940 NRPRQTEPIEPAKVPPPVHEDPVRNYMPVP 1029 RP T +P P + E + MPVP Sbjct: 1013 ARPPSTTTGQPHLYLPDISEG--KEVMPVP 1040
>O36979:POLG_ZYMVS Genome polyprotein [Contains: P1 proteinase - Zucchini yellow mosaic| virus (strain Singapore) (ZYMV) Length = 3083 Score = 32.0 bits (71), Expect = 6.1 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +2 Query: 362 HSQRRANIC*LTRLWTNGMTVTLKTPLEVHHIK---LFLIRMPREKTPF 499 H R+ N L R W TV T L+VH I+ + L+RMP++ PF Sbjct: 2090 HLFRKNNGTLLVRSWHGEFTVKNTTTLKVHFIEGKDVVLVRMPKDFPPF 2138
>Q96DN6:MBD6_HUMAN Methyl-CpG-binding domain protein 6 - Homo sapiens (Human)| Length = 1003 Score = 32.0 bits (71), Expect = 6.1 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 8/112 (7%) Frame = +1 Query: 691 MSEGNGMVWAIDKPGIP---HTPPGWERKITLRSEQGTRFAHVYYISLAGRTIRSMKELK 861 M+ GN A D+ G P P GW+R + R V YIS +G + S+++ + Sbjct: 1 MNGGNESSGA-DRAGGPVATSVPIGWQRCV--------REGAVLYISPSGTELSSLEQTR 51 Query: 862 KYLEDNPDCAAGLQLSQFSFKVPKPPNRPRQTEPIEP-----AKVPPPVHED 1002 YL + C GL+ VPK N +P+ P A V P ED Sbjct: 52 SYLLSDGTCKCGLEC---PLNVPKVFN----FDPLAPVTPGGAGVGPASEED 96
>Q8N1I0:DOCK4_HUMAN Dedicator of cytokinesis protein 4 - Homo sapiens (Human)| Length = 1966 Score = 32.0 bits (71), Expect = 6.1 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%) Frame = +1 Query: 925 VPKPPNRPRQTEPI-EPAKVPPP--VHEDPVRNYMPVPHGEANPVTHIPVTL 1071 VP P EP+ + +K PPP V+E +R +P+PH + PVT P L Sbjct: 1880 VPVPVPSYGGEEPVRKESKTPPPYSVYERTLRRPVPLPHSLSIPVTSEPPAL 1931
>Q99217:AMELX_HUMAN Amelogenin, X isoform precursor - Homo sapiens (Human)| Length = 191 Score = 32.0 bits (71), Expect = 6.1 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +1 Query: 925 VPKPPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANPVTHIPVTLDLQ-VPVMLP 1098 +P P +P Q +P++P P + PV P+P P +P +Q +P MLP Sbjct: 119 LPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLP-----PQPPLPPMFPMQPLPPMLP 172
>Q07666:SAM68_HUMAN KH domain-containing, RNA-binding, signal transduction-associated| protein 1 - Homo sapiens (Human) Length = 443 Score = 31.6 bits (70), Expect = 8.0 Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +3 Query: 123 PRSSQGRVLPEAGRLLRSRPNPRGSAPP*V*TARGEGRGPRRANLATKKPPLEAL-RG-T 296 P S+GR +P GR G+APP RG G GP R L P A+ RG T Sbjct: 278 PEPSRGRGVPVRGR---------GAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGAT 328 Query: 297 TNYGVQP 317 GV P Sbjct: 329 VTRGVPP 335
>P03186:TEGU_EBV Large tegument protein - Epstein-Barr virus (strain B95-8) (HHV-4)| (Human herpesvirus 4) Length = 3149 Score = 31.6 bits (70), Expect = 8.0 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Frame = +1 Query: 934 PPNRPRQTEPIEPAKVPPPVHEDPVRNYMPVPHGE-----ANPVTHIPVTLDLQVPVMLP 1098 PP+RP + P +P P H+ P + P PH A VT P L LQ+P+ LP Sbjct: 452 PPHRPPSAARLPPPVIPIP-HQSPPAS--PTPHPAPVSTIAPSVTPSP-RLPLQIPIPLP 507 Query: 1099 KKRKLN 1116 + N Sbjct: 508 QAAPSN 513
>O88874:CCNK_MOUSE Cyclin-K - Mus musculus (Mouse)| Length = 554 Score = 31.6 bits (70), Expect = 8.0 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +1 Query: 946 PRQTEPIEPAKVPPPVHEDPVRNYMPVPHGEANP 1047 P +T + ++PPP H PV P+PH P Sbjct: 392 PVETSDLPKVQIPPPAHPAPVHQPPPLPHRPPPP 425 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 228,491,052 Number of extensions: 5224338 Number of successful extensions: 16898 Number of sequences better than 10.0: 48 Number of HSP's gapped: 16570 Number of HSP's successfully gapped: 50 Length of query: 449 Length of database: 100,686,439 Length adjustment: 116 Effective length of query: 333 Effective length of database: 68,868,219 Effective search space: 22933116927 Effective search space used: 22933116927 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
